| Clone Name | rbaal34d15 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT030182.8| Mouse DNA sequence from clone RP23-21N15 on chromosome 13, complete sequence Length = 218811 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 106 aataacaacacacatgatcagctac 130 |||||||||| |||||||||||||| Sbjct: 182960 aataacaacagacatgatcagctac 182984
>gb|AC166289.4| Mus musculus chromosome 7, clone RP24-132A16, complete sequence Length = 172931 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 gagagctaaccttcttccag 399 |||||||||||||||||||| Sbjct: 134268 gagagctaaccttcttccag 134287
>ref|NM_189245.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 591 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 480 tgctgctgctcgtaggcgtcgtcc 503 ||||||||||||||| |||||||| Sbjct: 71 tgctgctgctcgtagtcgtcgtcc 48
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 gtccgacagcgcctcgagcg 519 |||||||||||||||||||| Sbjct: 2357197 gtccgacagcgcctcgagcg 2357178
>gb|AC101762.7| Mus musculus chromosome 7, clone RP24-315G8, complete sequence Length = 185445 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 gagagctaaccttcttccag 399 |||||||||||||||||||| Sbjct: 139488 gagagctaaccttcttccag 139507
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 cgtcgtccgacagcgcctcg 515 |||||||||||||||||||| Sbjct: 3594603 cgtcgtccgacagcgcctcg 3594584
>emb|AL451047.7| Human DNA sequence from clone RP11-1B20 on chromosome 1 Contains part of the CDC42BPA gene for CDC42 binding protein kinase alpha (DMPK-like), a novel gene and a CpG island, complete sequence Length = 77054 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 gaagagaatgggttcacagt 200 |||||||||||||||||||| Sbjct: 68394 gaagagaatgggttcacagt 68375
>emb|AL353605.12| Human DNA sequence from clone RP11-364M22 on chromosome 9, complete sequence Length = 135153 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 aataatctaatcttagctag 174 |||||||||||||||||||| Sbjct: 44068 aataatctaatcttagctag 44049
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 480 tgctgctgctcgtaggcgtcgtcc 503 ||||||||||||||| |||||||| Sbjct: 16500469 tgctgctgctcgtagtcgtcgtcc 16500492
>gb|AC158314.5| Mus musculus chromosome 7, clone RP23-145E21, complete sequence Length = 185668 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 gagagctaaccttcttccag 399 |||||||||||||||||||| Sbjct: 168206 gagagctaaccttcttccag 168187
>dbj|AP004767.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1460_H08 Length = 113514 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 480 tgctgctgctcgtaggcgtcgtcc 503 ||||||||||||||| |||||||| Sbjct: 21139 tgctgctgctcgtagtcgtcgtcc 21162
>dbj|AK103881.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033149O18, full insert sequence Length = 900 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 480 tgctgctgctcgtaggcgtcgtcc 503 ||||||||||||||| |||||||| Sbjct: 172 tgctgctgctcgtagtcgtcgtcc 149
>emb|AL929455.8| Mouse DNA sequence from clone RP23-463J10 on chromosome 2, complete sequence Length = 84387 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 tctccactctgttctgagtt 468 |||||||||||||||||||| Sbjct: 26396 tctccactctgttctgagtt 26377 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,781,488 Number of Sequences: 3902068 Number of extensions: 3781488 Number of successful extensions: 59632 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 59548 Number of HSP's gapped (non-prelim): 84 length of query: 531 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 508 effective length of database: 17,143,297,704 effective search space: 8708795233632 effective search space used: 8708795233632 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)