ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal33o01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ATY1_ARATH (Q9LT02) Putative cation-transporting ATPase (EC 3.6.... 223 4e-58
2ATC6_YEAST (P39986) Probable cation-transporting ATPase 1 (EC 3.... 79 2e-14
3YE56_CAEEL (P90747) Probable cation-transporting ATPase C10C6.6 ... 72 2e-12
4ATC4_SCHPO (O14072) Cation-transporting ATPase 4 (EC 3.6.3.-) 65 1e-10
5AT131_HUMAN (Q9HD20) Probable cation-transporting ATPase 13A1 (E... 62 2e-09
6AT131_MOUSE (Q9EPE9) Probable cation-transporting ATPase 13A1 (E... 60 6e-09
7TS1R1_MOUSE (Q99PG6) Taste receptor type 1 member 1 precursor (G... 30 5.3
8DYH11_HUMAN (Q96DT5) Ciliary dynein heavy chain 11 (Axonemal bet... 30 6.9

>ATY1_ARATH (Q9LT02) Putative cation-transporting ATPase (EC 3.6.3.-)|
          Length = 1179

 Score =  223 bits (568), Expect = 4e-58
 Identities = 102/146 (69%), Positives = 121/146 (82%)
 Frame = -1

Query: 686  LMSAVNXASKYMPEECIEPDSEFHPNLVNTVSYMVNMMIQVATFAVNYMGHPFNQSISEN 507
            L+ +V  A K+MPEECIEPD+ FHPNLVNTVSYMV+MM+QVATFAVNYMGHPFNQSI EN
Sbjct: 1032 LVYSVKEAEKHMPEECIEPDASFHPNLVNTVSYMVSMMLQVATFAVNYMGHPFNQSIREN 1091

Query: 506  KPFKYALYSAVVFFTVITSDMFRDLNDYMKLEPLPEGMRGKLLLWAMLMFCGCYGWERFL 327
            KPF YAL +   FFTVI SD+FRDLND +KL PLP+G+R KLL+WA LMF  CY WER L
Sbjct: 1092 KPFFYALIAGAGFFTVIASDLFRDLNDSLKLVPLPQGLRDKLLIWASLMFIICYSWERLL 1151

Query: 326  RWAFPGKMPAWEKRQKQAVANLDKKQ 249
            RWAFPGK+ +W+ +Q+   ANL+KK+
Sbjct: 1152 RWAFPGKISSWKHKQRAVTANLEKKK 1177



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>ATC6_YEAST (P39986) Probable cation-transporting ATPase 1 (EC 3.6.3.-)|
          Length = 1215

 Score = 78.6 bits (192), Expect = 2e-14
 Identities = 41/128 (32%), Positives = 69/128 (53%)
 Frame = -1

Query: 647  EECIEPDSEFHPNLVNTVSYMVNMMIQVATFAVNYMGHPFNQSISENKPFKYALYSAVVF 468
            E  ++ + EF P+L+NT  +++ ++ QV+TFAVNY G PF ++I  NK   Y L      
Sbjct: 1087 EPQVDLEKEFAPSLLNTGIFIIQLVQQVSTFAVNYQGEPFRENIRSNKGMYYGLLGVTGL 1146

Query: 467  FTVITSDMFRDLNDYMKLEPLPEGMRGKLLLWAMLMFCGCYGWERFLRWAFPGKMPAWEK 288
                 ++   +LN+ MK  P+ +  + KL L  +L F G +G E F ++ F    P+   
Sbjct: 1147 ALASATEFLPELNEAMKFVPMTDDFKIKLTLTLLLDFFGSWGVEHFFKFFFMDDKPSDIS 1206

Query: 287  RQKQAVAN 264
             Q+  +A+
Sbjct: 1207 VQQVKIAS 1214



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>YE56_CAEEL (P90747) Probable cation-transporting ATPase C10C6.6 in chromosome IV|
            (EC 3.6.3.-)
          Length = 1178

 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
 Frame = -1

Query: 638  IEPDSEFHPNLVNTVSYMVNMMIQVATFAVNYMGHPFNQSISENKPFKYA-LYSAVVFFT 462
            ++ +++F PN++NT  Y+++M +QV TFAVNY G PF +S+ ENK   Y+ ++S    FT
Sbjct: 1067 VDLEAKFTPNILNTTVYIISMALQVCTFAVNYRGRPFMESLFENKAMLYSIMFSGGAVFT 1126

Query: 461  VITSDMFRDLNDYMKLEPLPEGMRGKLLLWAMLMFCGCYGWERFLRW 321
             + S    DL    +L  LPE +R  LL+        CY  +R L +
Sbjct: 1127 -LASGQATDLMIQFELVVLPEALRNALLMCVTADLVICYIIDRGLNF 1172



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>ATC4_SCHPO (O14072) Cation-transporting ATPase 4 (EC 3.6.3.-)|
          Length = 1211

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 33/117 (28%), Positives = 61/117 (52%)
 Frame = -1

Query: 650  PEECIEPDSEFHPNLVNTVSYMVNMMIQVATFAVNYMGHPFNQSISENKPFKYALYSAVV 471
            P E ++ +  F P+L+NT  Y++ ++ QV+TFA+NY G PF +++SENK   Y L     
Sbjct: 1088 PLEKVDLEETFKPSLLNTAIYLLQLIQQVSTFAINYQGRPFREALSENKGMYYGLLGIAF 1147

Query: 470  FFTVITSDMFRDLNDYMKLEPLPEGMRGKLLLWAMLMFCGCYGWERFLRWAFPGKMP 300
                  ++   +LN  ++L  +    + +LL   ++ +  C+  E  ++  F    P
Sbjct: 1148 VAIAGVTEFSPELNAKLQLVKMAYNFQIQLLATMVVDYAACWIIEELMKKYFRDNKP 1204



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>AT131_HUMAN (Q9HD20) Probable cation-transporting ATPase 13A1 (EC 3.6.3.-)|
          Length = 1204

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 32/98 (32%), Positives = 54/98 (55%)
 Frame = -1

Query: 647  EECIEPDSEFHPNLVNTVSYMVNMMIQVATFAVNYMGHPFNQSISENKPFKYALYSAVVF 468
            E+ ++   EF P+LVN+  Y++ M +Q+ATFA+NY G PF +S+ ENKP  ++L  +++ 
Sbjct: 1085 EQFVDLYKEFEPSLVNSTVYIMAMAMQMATFAINYKGPPFMESLPENKPLVWSLAVSLLA 1144

Query: 467  FTVITSDMFRDLNDYMKLEPLPEGMRGKLLLWAMLMFC 354
               +      D N    L  +P   +  +    +L FC
Sbjct: 1145 IIGLLLGSSPDFNSQFGLVDIPVEFKLVIAQVLLLDFC 1182



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>AT131_MOUSE (Q9EPE9) Probable cation-transporting ATPase 13A1 (EC 3.6.3.-) (CATP)|
          Length = 1200

 Score = 60.1 bits (144), Expect = 6e-09
 Identities = 33/100 (33%), Positives = 56/100 (56%)
 Frame = -1

Query: 647  EECIEPDSEFHPNLVNTVSYMVNMMIQVATFAVNYMGHPFNQSISENKPFKYALYSAVVF 468
            E+ ++   EF P+LVN+  Y++ M +Q+ATFA+NY G PF +S+ ENKP  ++L  +++ 
Sbjct: 1081 EQFVDLYKEFEPSLVNSTVYIMAMAMQMATFAINYKGPPFMESLPENKPLVWSLAVSLLA 1140

Query: 467  FTVITSDMFRDLNDYMKLEPLPEGMRGKLLLWAMLMFCGC 348
               +      D N    L  +P  +  KL++  +L    C
Sbjct: 1141 IIGLLLGSSPDFNSQFGLVDIP--VEFKLVIGQVLALDFC 1178



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>TS1R1_MOUSE (Q99PG6) Taste receptor type 1 member 1 precursor (G-protein coupled|
            receptor 70)
          Length = 842

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
 Frame = -1

Query: 605  VNTVSYMV----NMMIQVATFAVNYMGHPFNQSISENKPFKYAL----YSAVVFFT---V 459
            VN+V ++V    N+++ ++TF  +Y+G    ++ +E K   ++L     S + FFT   +
Sbjct: 724  VNSVGFLVAFAHNILLSISTFVCSYLGKELPENYNEAKCVTFSLLLHFVSWIAFFTMSSI 783

Query: 458  ITSDMFRDLNDYMKLEPLPEGMRGKLLLWAMLMFC 354
                    +N    L  L  G  G  L    ++ C
Sbjct: 784  YQGSYLPAVNVLAGLATLSGGFSGYFLPKCYVILC 818



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>DYH11_HUMAN (Q96DT5) Ciliary dynein heavy chain 11 (Axonemal beta dynein heavy|
            chain 11)
          Length = 4523

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 7/40 (17%)
 Frame = -1

Query: 686  LMSAVNXASKYMPEECIE-------PDSEFHPNLVNTVSY 588
            L + +N   +++PE C++        D EF+PNL+ T S+
Sbjct: 3259 LQALINYDKEHIPENCLKVVNEHYLKDPEFNPNLIRTKSF 3298


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,272,445
Number of Sequences: 219361
Number of extensions: 2300186
Number of successful extensions: 5462
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5458
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6825954960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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