| Clone Name | rbaal33o01 |
|---|---|
| Clone Library Name | barley_pub |
>ATY1_ARATH (Q9LT02) Putative cation-transporting ATPase (EC 3.6.3.-)| Length = 1179 Score = 223 bits (568), Expect = 4e-58 Identities = 102/146 (69%), Positives = 121/146 (82%) Frame = -1 Query: 686 LMSAVNXASKYMPEECIEPDSEFHPNLVNTVSYMVNMMIQVATFAVNYMGHPFNQSISEN 507 L+ +V A K+MPEECIEPD+ FHPNLVNTVSYMV+MM+QVATFAVNYMGHPFNQSI EN Sbjct: 1032 LVYSVKEAEKHMPEECIEPDASFHPNLVNTVSYMVSMMLQVATFAVNYMGHPFNQSIREN 1091 Query: 506 KPFKYALYSAVVFFTVITSDMFRDLNDYMKLEPLPEGMRGKLLLWAMLMFCGCYGWERFL 327 KPF YAL + FFTVI SD+FRDLND +KL PLP+G+R KLL+WA LMF CY WER L Sbjct: 1092 KPFFYALIAGAGFFTVIASDLFRDLNDSLKLVPLPQGLRDKLLIWASLMFIICYSWERLL 1151 Query: 326 RWAFPGKMPAWEKRQKQAVANLDKKQ 249 RWAFPGK+ +W+ +Q+ ANL+KK+ Sbjct: 1152 RWAFPGKISSWKHKQRAVTANLEKKK 1177
>ATC6_YEAST (P39986) Probable cation-transporting ATPase 1 (EC 3.6.3.-)| Length = 1215 Score = 78.6 bits (192), Expect = 2e-14 Identities = 41/128 (32%), Positives = 69/128 (53%) Frame = -1 Query: 647 EECIEPDSEFHPNLVNTVSYMVNMMIQVATFAVNYMGHPFNQSISENKPFKYALYSAVVF 468 E ++ + EF P+L+NT +++ ++ QV+TFAVNY G PF ++I NK Y L Sbjct: 1087 EPQVDLEKEFAPSLLNTGIFIIQLVQQVSTFAVNYQGEPFRENIRSNKGMYYGLLGVTGL 1146 Query: 467 FTVITSDMFRDLNDYMKLEPLPEGMRGKLLLWAMLMFCGCYGWERFLRWAFPGKMPAWEK 288 ++ +LN+ MK P+ + + KL L +L F G +G E F ++ F P+ Sbjct: 1147 ALASATEFLPELNEAMKFVPMTDDFKIKLTLTLLLDFFGSWGVEHFFKFFFMDDKPSDIS 1206 Query: 287 RQKQAVAN 264 Q+ +A+ Sbjct: 1207 VQQVKIAS 1214
>YE56_CAEEL (P90747) Probable cation-transporting ATPase C10C6.6 in chromosome IV| (EC 3.6.3.-) Length = 1178 Score = 71.6 bits (174), Expect = 2e-12 Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 1/107 (0%) Frame = -1 Query: 638 IEPDSEFHPNLVNTVSYMVNMMIQVATFAVNYMGHPFNQSISENKPFKYA-LYSAVVFFT 462 ++ +++F PN++NT Y+++M +QV TFAVNY G PF +S+ ENK Y+ ++S FT Sbjct: 1067 VDLEAKFTPNILNTTVYIISMALQVCTFAVNYRGRPFMESLFENKAMLYSIMFSGGAVFT 1126 Query: 461 VITSDMFRDLNDYMKLEPLPEGMRGKLLLWAMLMFCGCYGWERFLRW 321 + S DL +L LPE +R LL+ CY +R L + Sbjct: 1127 -LASGQATDLMIQFELVVLPEALRNALLMCVTADLVICYIIDRGLNF 1172
>ATC4_SCHPO (O14072) Cation-transporting ATPase 4 (EC 3.6.3.-)| Length = 1211 Score = 65.5 bits (158), Expect = 1e-10 Identities = 33/117 (28%), Positives = 61/117 (52%) Frame = -1 Query: 650 PEECIEPDSEFHPNLVNTVSYMVNMMIQVATFAVNYMGHPFNQSISENKPFKYALYSAVV 471 P E ++ + F P+L+NT Y++ ++ QV+TFA+NY G PF +++SENK Y L Sbjct: 1088 PLEKVDLEETFKPSLLNTAIYLLQLIQQVSTFAINYQGRPFREALSENKGMYYGLLGIAF 1147 Query: 470 FFTVITSDMFRDLNDYMKLEPLPEGMRGKLLLWAMLMFCGCYGWERFLRWAFPGKMP 300 ++ +LN ++L + + +LL ++ + C+ E ++ F P Sbjct: 1148 VAIAGVTEFSPELNAKLQLVKMAYNFQIQLLATMVVDYAACWIIEELMKKYFRDNKP 1204
>AT131_HUMAN (Q9HD20) Probable cation-transporting ATPase 13A1 (EC 3.6.3.-)| Length = 1204 Score = 61.6 bits (148), Expect = 2e-09 Identities = 32/98 (32%), Positives = 54/98 (55%) Frame = -1 Query: 647 EECIEPDSEFHPNLVNTVSYMVNMMIQVATFAVNYMGHPFNQSISENKPFKYALYSAVVF 468 E+ ++ EF P+LVN+ Y++ M +Q+ATFA+NY G PF +S+ ENKP ++L +++ Sbjct: 1085 EQFVDLYKEFEPSLVNSTVYIMAMAMQMATFAINYKGPPFMESLPENKPLVWSLAVSLLA 1144 Query: 467 FTVITSDMFRDLNDYMKLEPLPEGMRGKLLLWAMLMFC 354 + D N L +P + + +L FC Sbjct: 1145 IIGLLLGSSPDFNSQFGLVDIPVEFKLVIAQVLLLDFC 1182
>AT131_MOUSE (Q9EPE9) Probable cation-transporting ATPase 13A1 (EC 3.6.3.-) (CATP)| Length = 1200 Score = 60.1 bits (144), Expect = 6e-09 Identities = 33/100 (33%), Positives = 56/100 (56%) Frame = -1 Query: 647 EECIEPDSEFHPNLVNTVSYMVNMMIQVATFAVNYMGHPFNQSISENKPFKYALYSAVVF 468 E+ ++ EF P+LVN+ Y++ M +Q+ATFA+NY G PF +S+ ENKP ++L +++ Sbjct: 1081 EQFVDLYKEFEPSLVNSTVYIMAMAMQMATFAINYKGPPFMESLPENKPLVWSLAVSLLA 1140 Query: 467 FTVITSDMFRDLNDYMKLEPLPEGMRGKLLLWAMLMFCGC 348 + D N L +P + KL++ +L C Sbjct: 1141 IIGLLLGSSPDFNSQFGLVDIP--VEFKLVIGQVLALDFC 1178
>TS1R1_MOUSE (Q99PG6) Taste receptor type 1 member 1 precursor (G-protein coupled| receptor 70) Length = 842 Score = 30.4 bits (67), Expect = 5.3 Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 11/95 (11%) Frame = -1 Query: 605 VNTVSYMV----NMMIQVATFAVNYMGHPFNQSISENKPFKYAL----YSAVVFFT---V 459 VN+V ++V N+++ ++TF +Y+G ++ +E K ++L S + FFT + Sbjct: 724 VNSVGFLVAFAHNILLSISTFVCSYLGKELPENYNEAKCVTFSLLLHFVSWIAFFTMSSI 783 Query: 458 ITSDMFRDLNDYMKLEPLPEGMRGKLLLWAMLMFC 354 +N L L G G L ++ C Sbjct: 784 YQGSYLPAVNVLAGLATLSGGFSGYFLPKCYVILC 818
>DYH11_HUMAN (Q96DT5) Ciliary dynein heavy chain 11 (Axonemal beta dynein heavy| chain 11) Length = 4523 Score = 30.0 bits (66), Expect = 6.9 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 7/40 (17%) Frame = -1 Query: 686 LMSAVNXASKYMPEECIE-------PDSEFHPNLVNTVSY 588 L + +N +++PE C++ D EF+PNL+ T S+ Sbjct: 3259 LQALINYDKEHIPENCLKVVNEHYLKDPEFNPNLIRTKSF 3298 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 106,272,445 Number of Sequences: 219361 Number of extensions: 2300186 Number of successful extensions: 5462 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 5246 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5458 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6825954960 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)