ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal33n22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197846.1| Oryza sativa (japonica cultivar-group) putative... 68 3e-08
2dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
3gb|AC060755.9|AC060755 Oryza sativa chromosome 10 BAC OSJNBa0003... 66 1e-07
4dbj|AK100907.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
5dbj|AK071318.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
6gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 66 1e-07
7dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
8gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 64 4e-07
9emb|AL731744.6|CNS08C7T Oryza sativa chromosome 12, . BAC OSJNBa... 64 4e-07
10gb|AY108133.1| Zea mays PCO115187 mRNA sequence 54 4e-04
11emb|AL596028.6| Human DNA sequence from clone RP11-11L12 on chro... 46 0.10
12gb|AC007145.10| Drosophila melanogaster, chromosome 2L, region 3... 44 0.41
13gb|AE003662.3| Drosophila melanogaster chromosome 2L, section 71... 44 0.41
14emb|AL671982.4| Mouse DNA sequence from clone RP23-132H1 on chro... 44 0.41
15ref|XM_872347.1| PREDICTED: Bos taurus similar to Phosphatidylin... 42 1.6
16ref|XM_872238.1| PREDICTED: Bos taurus similar to Phosphatidylin... 42 1.6
17ref|XM_864083.1| PREDICTED: Bos taurus similar to Phosphatidylin... 42 1.6
18gb|AC131596.10| Mus musculus chromosome 10, clone RP23-476G10, c... 42 1.6
19gb|AC117509.9| Homo sapiens 3 BAC RP11-31B16 (Roswell Park Cance... 42 1.6
20gb|AC025508.7|AC025508 Homo sapiens, clone RP11-659A24, complete... 42 1.6
21gb|AC010747.10| Homo sapiens BAC clone RP11-555H9 from 2, comple... 42 1.6
22emb|Z70781.1|CEF57A8 Caenorhabditis elegans Cosmid F57A8, comple... 42 1.6
23gb|AC164157.3| Mus musculus BAC clone RP24-297C1 from chromosome... 40 6.5
24gb|AC107811.28| Mus musculus chromosome 3, clone RP23-69D10, com... 40 6.5
25gb|AC145759.3| Microcebus murinus clone CH257-501B11, complete s... 40 6.5
26gb|AC100734.4| Mus musculus chromosome 15, clone RP24-316L11, co... 40 6.5
27gb|AC161373.4| Mus musculus BAC clone RP23-308E4 from chromosome... 40 6.5
28gb|AC115911.14| Mus musculus chromosome 6, clone RP24-481I20, co... 40 6.5
29emb|CR847563.12| Zebrafish DNA sequence from clone CH211-202H14 ... 40 6.5
30gb|AC131671.3| Mus musculus BAC clone RP23-312H8 from chromosome... 40 6.5
31gb|AC125220.3| Mus musculus BAC clone RP23-70H20 from 15, comple... 40 6.5
32emb|AL590668.5| Human DNA sequence from clone RP11-463L20 on chr... 40 6.5
33gb|AC166246.1| Mus musculus BAC clone RP24-80F22 from chromosome... 40 6.5
34emb|AL590388.4| Mouse DNA sequence from clone RP23-480B19 on chr... 40 6.5
35gb|AC161347.2| Mus musculus chromosome 15, clone RP23-273M5, com... 40 6.5
36emb|BX544881.7| Zebrafish DNA sequence from clone DKEY-64F15 in ... 40 6.5
37gb|AC051654.9| Homo sapiens chromosome 8, clone RP11-35O14, comp... 40 6.5
38gb|AC009835.14| Homo sapiens chromosome 18, clone RP11-413I9, co... 40 6.5
39gb|AC046175.6| Homo sapiens chromosome 8, clone RP11-577O23, com... 40 6.5
40gb|AC018991.10| Homo sapiens, clone RP11-448E20, complete sequence 40 6.5
41gb|AC016734.7| Homo sapiens BAC clone RP11-391A7 from 2, complet... 40 6.5
42emb|BX537115.11| Zebrafish DNA sequence from clone CH211-207B20 ... 40 6.5
43gb|AF363578.1| Homo sapiens ATPase H+ transporting lysosomal pro... 40 6.5
44gb|AC123759.7| Mus musculus chromosome 3, clone RP24-303I14, com... 40 6.5
45gb|AC166329.3| Pan troglodytes BAC clone CH251-143I6 from chromo... 40 6.5
46emb|BX000491.1|CNS08CDH Oryza sativa chromosome 12, . BAC OSJNBb... 40 6.5
47gb|DP000022.1| Microcebus murinus target 1 genomic scaffold 40 6.5
48emb|AJ492794.1|CRU492794 Cynanchum rubricoronae 18S rRNA gene (p... 40 6.5
49dbj|AB002099.1| Candida tropicalis strain IFO 0618 DNA, repeat s... 40 6.5
50dbj|AP003550.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 6.5 
>ref|NM_197846.1| Oryza sativa (japonica cultivar-group) putative enoyl-CoA-hydratase
            (OSJNBa0003O19.9), mRNA
          Length = 1601

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 125/155 (80%), Gaps = 1/155 (0%)
 Strand = Plus / Minus

                                                                        
Query: 325  atcagagcttgggaacaattcttcttccatgggaagacctagttggtaggttcaaatctt 384
            |||| |||||||||||||  || ||||||||||||   ||||  ||||||| ||||||||
Sbjct: 1087 atcaaagcttgggaacaagcctccttccatgggaacgtctaggaggtaggtccaaatctt 1028

                                                                        
Query: 385  cccaatgtggatcatcgaccttggagaagtantttgcaactaccccgtcatgcacttgat 444
            |||| | |||||||||||| ||||| || || ||| | || ||| |||| ||||| |  |
Sbjct: 1027 cccactctggatcatcgactttggaaaaatatttttccaccacctcgtcgtgcacctctt 968

                                               
Query: 445  ccaganttggcggcntccacttttgggtttcgatc 479
            |||   |||| ||| ||||| ||||||||||||||
Sbjct: 967  ccaaccttggaggcatccac-tttgggtttcgatc 934
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 72/85 (84%)
 Strand = Plus / Plus

                                                                            
Query: 325      atcagagcttgggaacaattcttcttccatgggaagacctagttggtaggttcaaatctt 384
                |||| |||||||||||||  || ||||||||||||   ||||  ||||||| ||||||||
Sbjct: 22210262 atcaaagcttgggaacaagcctccttccatgggaacgtctaggaggtaggtccaaatctt 22210321

                                         
Query: 385      cccaatgtggatcatcgaccttgga 409
                |||| | |||||||||||| |||||
Sbjct: 22210322 cccactctggatcatcgactttgga 22210346
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>gb|AC060755.9|AC060755 Oryza sativa chromosome 10 BAC OSJNBa0003O19 genomic sequence, complete
             sequence
          Length = 172427

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 72/85 (84%)
 Strand = Plus / Plus

                                                                         
Query: 325   atcagagcttgggaacaattcttcttccatgggaagacctagttggtaggttcaaatctt 384
             |||| |||||||||||||  || ||||||||||||   ||||  ||||||| ||||||||
Sbjct: 27505 atcaaagcttgggaacaagcctccttccatgggaacgtctaggaggtaggtccaaatctt 27564

                                      
Query: 385   cccaatgtggatcatcgaccttgga 409
             |||| | |||||||||||| |||||
Sbjct: 27565 cccactctggatcatcgactttgga 27589
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>dbj|AK100907.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132F01, full
            insert sequence
          Length = 2189

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 121/150 (80%), Gaps = 1/150 (0%)
 Strand = Plus / Minus

                                                                        
Query: 330  agcttgggaacaattcttcttccatgggaagacctagttggtaggttcaaatcttcccaa 389
            |||||||||||||  || ||||||||||||   ||||  ||||||| |||||||||||| 
Sbjct: 1681 agcttgggaacaagcctccttccatgggaacgtctaggaggtaggtccaaatcttcccac 1622

                                                                        
Query: 390  tgtggatcatcgaccttggagaagtantttgcaactaccccgtcatgcacttgatccaga 449
            | |||||||||||| ||||| || || ||| | || ||| |||| ||||| |  ||||  
Sbjct: 1621 tctggatcatcgactttggaaaaatatttttcgaccacctcgtcgtgcacctcttccaac 1562

                                          
Query: 450  nttggcggcntccacttttgggtttcgatc 479
             |||| ||| ||||| ||||||||||||||
Sbjct: 1561 cttggaggcatccac-tttgggtttcgatc 1533
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>dbj|AK071318.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086L03, full
            insert sequence
          Length = 2049

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 121/150 (80%), Gaps = 1/150 (0%)
 Strand = Plus / Minus

                                                                        
Query: 330  agcttgggaacaattcttcttccatgggaagacctagttggtaggttcaaatcttcccaa 389
            |||||||||||||  || ||||||||||||   ||||  ||||||| |||||||||||| 
Sbjct: 1542 agcttgggaacaagcctccttccatgggaacgtctaggaggtaggtccaaatcttcccac 1483

                                                                        
Query: 390  tgtggatcatcgaccttggagaagtantttgcaactaccccgtcatgcacttgatccaga 449
            | |||||||||||| ||||| || || ||| | || ||| |||| ||||| |  ||||  
Sbjct: 1482 tctggatcatcgactttggaaaaatatttttcgaccacctcgtcgtgcacctcttccaac 1423

                                          
Query: 450  nttggcggcntccacttttgggtttcgatc 479
             |||| ||| ||||| ||||||||||||||
Sbjct: 1422 cttggaggcatccac-tttgggtttcgatc 1394
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 72/85 (84%)
 Strand = Plus / Plus

                                                                            
Query: 325      atcagagcttgggaacaattcttcttccatgggaagacctagttggtaggttcaaatctt 384
                |||| |||||||||||||  || ||||||||||||   ||||  ||||||| ||||||||
Sbjct: 22222330 atcaaagcttgggaacaagcctccttccatgggaacgtctaggaggtaggtccaaatctt 22222389

                                         
Query: 385      cccaatgtggatcatcgaccttgga 409
                |||| | |||||||||||| |||||
Sbjct: 22222390 cccactctggatcatcgactttgga 22222414
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                           
Query: 330     agcttgggaacaattcttcttccatgggaagacctagttggtaggttcaaatcttcccaa 389
               |||||||||||||  || ||||||||||||   ||||  ||||||| |||||||||||| 
Sbjct: 9364082 agcttgggaacaagcctccttccatgggaacgtctaggaggtaggtccaaatcttcccac 9364023

                                   
Query: 390     tgtggatcatcgaccttgga 409
               | |||||||||||| |||||
Sbjct: 9364022 tctggatcatcgactttgga 9364003



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 70     tcaaacaaaataaactatagaagt 93
              ||||||||||||||||| ||||||
Sbjct: 212994 tcaaacaaaataaactagagaagt 213017
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                           
Query: 330     agcttgggaacaattcttcttccatgggaagacctagttggtaggttcaaatcttcccaa 389
               |||||||||||||  || ||||||||||||   ||||  ||||||| |||||||||||| 
Sbjct: 9363967 agcttgggaacaagcctccttccatgggaacgtctaggaggtaggtccaaatcttcccac 9363908

                                   
Query: 390     tgtggatcatcgaccttgga 409
               | |||||||||||| |||||
Sbjct: 9363907 tctggatcatcgactttgga 9363888



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 70     tcaaacaaaataaactatagaagt 93
              ||||||||||||||||| ||||||
Sbjct: 212994 tcaaacaaaataaactagagaagt 213017
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>emb|AL731744.6|CNS08C7T Oryza sativa chromosome 12, . BAC OSJNBa0026C14 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 190718

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                         
Query: 330   agcttgggaacaattcttcttccatgggaagacctagttggtaggttcaaatcttcccaa 389
             |||||||||||||  || ||||||||||||   ||||  ||||||| |||||||||||| 
Sbjct: 74973 agcttgggaacaagcctccttccatgggaacgtctaggaggtaggtccaaatcttcccac 75032

                                 
Query: 390   tgtggatcatcgaccttgga 409
             | |||||||||||| |||||
Sbjct: 75033 tctggatcatcgactttgga 75052
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>gb|AY108133.1| Zea mays PCO115187 mRNA sequence
          Length = 787

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 88/108 (81%), Gaps = 1/108 (0%)
 Strand = Plus / Minus

                                                                       
Query: 369 ggtaggttcaaatcttcccaatgtggatcatcgaccttggagaagtantttgcaactacc 428
           ||||||||||| |||||||| ||||||||||| |   ||||||| || | | ||||  ||
Sbjct: 541 ggtaggttcaagtcttcccactgtggatcatcaattctggagaaatactgttcaacagcc 482

                                                           
Query: 429 ccgtcatgcacttgatccaganttggcggcntccacttttgggtttcg 476
            ||||||||||||| ||||   |||| ||| ||||| |||||||||||
Sbjct: 481 tcgtcatgcacttgttccaaccttggaggcatccac-tttgggtttcg 435
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>emb|AL596028.6| Human DNA sequence from clone RP11-11L12 on chromosome 6 Contains a
            laminin receptor 1 (67kD, ribosomal protein SA) (LAMR1)
            pseudogene and a pituitary tumor-transforming 1 (PTTG1)
            pseudogene, complete sequence
          Length = 56220

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 66   tcaatcaaacaaaataaactata 88
            |||||||||||||||||||||||
Sbjct: 2451 tcaatcaaacaaaataaactata 2429
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>gb|AC007145.10| Drosophila melanogaster, chromosome 2L, region 37D, BAC clone
             BACR10I09, complete sequence
          Length = 169289

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 28    tattattcttttgtttaaaaaataaa 53
             |||||||| |||||||||||||||||
Sbjct: 99770 tattattcatttgtttaaaaaataaa 99745
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>gb|AE003662.3| Drosophila melanogaster chromosome 2L, section 71 of 83 of the complete
             sequence
          Length = 266205

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 28    tattattcttttgtttaaaaaataaa 53
             |||||||| |||||||||||||||||
Sbjct: 94951 tattattcatttgtttaaaaaataaa 94926
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>emb|AL671982.4| Mouse DNA sequence from clone RP23-132H1 on chromosome X, complete
              sequence
          Length = 190627

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 31     tattcttttgtttaaaaaataa 52
              ||||||||||||||||||||||
Sbjct: 160121 tattcttttgtttaaaaaataa 160142
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>ref|XM_872347.1| PREDICTED: Bos taurus similar to Phosphatidylinositol transfer
            protein beta isoform (PtdIns transfer protein beta)
            (PtdInsTP) (PI-TP-beta), transcript variant 3
            (LOC613773), mRNA
          Length = 2950

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 25   agctattattcttttgtttaaaaaa 49
            ||||||||||||||| |||||||||
Sbjct: 2259 agctattattcttttctttaaaaaa 2235
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>ref|XM_872238.1| PREDICTED: Bos taurus similar to Phosphatidylinositol transfer
            protein beta isoform (PtdIns transfer protein beta)
            (PtdInsTP) (PI-TP-beta), transcript variant 2
            (LOC613773), mRNA
          Length = 2935

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 25   agctattattcttttgtttaaaaaa 49
            ||||||||||||||| |||||||||
Sbjct: 2244 agctattattcttttctttaaaaaa 2220
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>ref|XM_864083.1| PREDICTED: Bos taurus similar to Phosphatidylinositol transfer
            protein beta isoform (PtdIns transfer protein beta)
            (PtdInsTP) (PI-TP-beta), transcript variant 1
            (LOC613773), mRNA
          Length = 2987

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 25   agctattattcttttgtttaaaaaa 49
            ||||||||||||||| |||||||||
Sbjct: 2296 agctattattcttttctttaaaaaa 2272
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>gb|AC131596.10| Mus musculus chromosome 10, clone RP23-476G10, complete sequence
          Length = 178668

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 33    ttcttttgtttaaaaaataaa 53
             |||||||||||||||||||||
Sbjct: 86753 ttcttttgtttaaaaaataaa 86733
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>gb|AC117509.9| Homo sapiens 3 BAC RP11-31B16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 113201

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 29    attattcttttgtttaaaaaa 49
             |||||||||||||||||||||
Sbjct: 19916 attattcttttgtttaaaaaa 19896
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>gb|AC025508.7|AC025508 Homo sapiens, clone RP11-659A24, complete sequence
          Length = 193598

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 37     tttgtttaaaaaataaactat 57
              |||||||||||||||||||||
Sbjct: 128732 tttgtttaaaaaataaactat 128712
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>gb|AC010747.10| Homo sapiens BAC clone RP11-555H9 from 2, complete sequence
          Length = 159512

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 34     tcttttgtttaaaaaataaac 54
              |||||||||||||||||||||
Sbjct: 103608 tcttttgtttaaaaaataaac 103628
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>emb|Z70781.1|CEF57A8 Caenorhabditis elegans Cosmid F57A8, complete sequence
          Length = 30894

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 35    cttttgtttaaaaaataaactatggaacc 63
             ||||| |||||||||||||| ||||||||
Sbjct: 26323 cttttctttaaaaaataaacgatggaacc 26351
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>gb|AC164157.3| Mus musculus BAC clone RP24-297C1 from chromosome 6, complete sequence
          Length = 176868

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 60    aaccactcaatcaaacaaaataaa 83
             |||||| |||||||||||||||||
Sbjct: 40385 aaccacccaatcaaacaaaataaa 40362
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>gb|AC107811.28| Mus musculus chromosome 3, clone RP23-69D10, complete sequence
          Length = 166255

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 28     tattattcttttgtttaaaa 47
              ||||||||||||||||||||
Sbjct: 165524 tattattcttttgtttaaaa 165505
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>gb|AC145759.3| Microcebus murinus clone CH257-501B11, complete sequence
          Length = 32674

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    ttttgtttaaaaaataaact 55
             ||||||||||||||||||||
Sbjct: 10921 ttttgtttaaaaaataaact 10940
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>gb|AC100734.4| Mus musculus chromosome 15, clone RP24-316L11, complete sequence
          Length = 182088

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    ttattcttttgtttaaaaaa 49
             ||||||||||||||||||||
Sbjct: 87265 ttattcttttgtttaaaaaa 87284
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>gb|AC161373.4| Mus musculus BAC clone RP23-308E4 from chromosome 6, complete sequence
          Length = 189028

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 60    aaccactcaatcaaacaaaataaa 83
             |||||| |||||||||||||||||
Sbjct: 27737 aaccacccaatcaaacaaaataaa 27760
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>gb|AC115911.14| Mus musculus chromosome 6, clone RP24-481I20, complete sequence
          Length = 168641

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 60     aaccactcaatcaaacaaaataaa 83
              |||||| |||||||||||||||||
Sbjct: 143586 aaccacccaatcaaacaaaataaa 143609



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 60    aaccactcaatcaaacaaaataaa 83
             |||||| |||||||||||||||||
Sbjct: 46275 aaccacccaatcaaacaaaataaa 46298
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>emb|CR847563.12| Zebrafish DNA sequence from clone CH211-202H14 in linkage group 11,
              complete sequence
          Length = 204337

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 31     tattcttttgtttaaaaaataaac 54
              ||||||||||||||||||| ||||
Sbjct: 132819 tattcttttgtttaaaaaaaaaac 132842
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>gb|AC131671.3| Mus musculus BAC clone RP23-312H8 from chromosome 3, complete sequence
          Length = 195851

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 33     ttcttttgtttaaaaaataaacta 56
              ||||||| ||||||||||||||||
Sbjct: 125918 ttcttttctttaaaaaataaacta 125895
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>gb|AC125220.3| Mus musculus BAC clone RP23-70H20 from 15, complete sequence
          Length = 184933

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    ttattcttttgtttaaaaaa 49
             ||||||||||||||||||||
Sbjct: 27247 ttattcttttgtttaaaaaa 27228
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>emb|AL590668.5| Human DNA sequence from clone RP11-463L20 on chromosome 6 Contains the
             MUT gene for methylmalonyl Coenzyme A mutase snd the 5'
             end of a novel gene, complete sequence
          Length = 67410

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 70    tcaaacaaaataaactatagaagt 93
             ||||||||||||||||| ||||||
Sbjct: 38138 tcaaacaaaataaactaaagaagt 38161
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>gb|AC166246.1| Mus musculus BAC clone RP24-80F22 from chromosome 17, complete sequence
          Length = 194452

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 28     tattattcttttgtttaaaa 47
              ||||||||||||||||||||
Sbjct: 133231 tattattcttttgtttaaaa 133212
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>emb|AL590388.4| Mouse DNA sequence from clone RP23-480B19 on chromosome 13 Contains the
              Slc17a1 gene for solute carrier family 17 (vesicular
              glutamate transporter) member 1, two genes for novel solute
              carrier family 17 (Slc17) members, two novel genes, the
              gene for a novel C3HC4 type zinc finger (ring finger)
              protein, the gene for an H2a, an H2b, two genes for H3 and
              two genes for H4 histone family members, a H2a histone
              family pseudogene, the H1f1 and  H1f2 genes for H1 histone
              family members 1 and 2, the H3f2 gene for H3 histone
              family, member 2 (H3.2), a novel pseudogene, the Hfe gene
              for hemochromatosis protein (Mr2) and two CpG islands,
              complete sequence
          Length = 186062

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 36     ttttgtttaaaaaataaact 55
              ||||||||||||||||||||
Sbjct: 117833 ttttgtttaaaaaataaact 117852
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>gb|AC161347.2| Mus musculus chromosome 15, clone RP23-273M5, complete sequence
          Length = 191833

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 30     ttattcttttgtttaaaaaa 49
              ||||||||||||||||||||
Sbjct: 135110 ttattcttttgtttaaaaaa 135091
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>emb|BX544881.7| Zebrafish DNA sequence from clone DKEY-64F15 in linkage group 14,
              complete sequence
          Length = 163842

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 72     aaacaaaataaactatagaa 91
              ||||||||||||||||||||
Sbjct: 106680 aaacaaaataaactatagaa 106661
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>gb|AC051654.9| Homo sapiens chromosome 8, clone RP11-35O14, complete sequence
          Length = 176393

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 33   ttcttttgtttaaaaaataa 52
            ||||||||||||||||||||
Sbjct: 1817 ttcttttgtttaaaaaataa 1836
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>gb|AC009835.14| Homo sapiens chromosome 18, clone RP11-413I9, complete sequence
          Length = 157979

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 30    ttattcttttgtttaaaaaataaa 53
             |||||||||| |||||||||||||
Sbjct: 96754 ttattcttttttttaaaaaataaa 96731
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>gb|AC046175.6| Homo sapiens chromosome 8, clone RP11-577O23, complete sequence
          Length = 194972

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    ttcttttgtttaaaaaataa 52
             ||||||||||||||||||||
Sbjct: 52512 ttcttttgtttaaaaaataa 52531
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>gb|AC018991.10| Homo sapiens, clone RP11-448E20, complete sequence
          Length = 174049

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 33   ttcttttgtttaaaaaataa 52
            ||||||||||||||||||||
Sbjct: 5470 ttcttttgtttaaaaaataa 5489
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>gb|AC016734.7| Homo sapiens BAC clone RP11-391A7 from 2, complete sequence
          Length = 218836

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 69     atcaaacaaaataaactata 88
              ||||||||||||||||||||
Sbjct: 171190 atcaaacaaaataaactata 171209
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>emb|BX537115.11| Zebrafish DNA sequence from clone CH211-207B20 in linkage group 14,
              complete sequence
          Length = 192331

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 72     aaacaaaataaactatagaa 91
              ||||||||||||||||||||
Sbjct: 115507 aaacaaaataaactatagaa 115488
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>gb|AF363578.1| Homo sapiens ATPase H+ transporting lysosomal protein (ATP6C) gene,
             complete cds; BAALC (BAALC) gene, complete cds,
             alternatively spliced; and frizzled-like protein 6 (FZD6)
             gene, complete cds
          Length = 347253

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    ttcttttgtttaaaaaataa 52
             ||||||||||||||||||||
Sbjct: 76480 ttcttttgtttaaaaaataa 76461
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>gb|AC123759.7| Mus musculus chromosome 3, clone RP24-303I14, complete sequence
          Length = 189387

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    tattattcttttgtttaaaa 47
             ||||||||||||||||||||
Sbjct: 37856 tattattcttttgtttaaaa 37837
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>gb|AC166329.3| Pan troglodytes BAC clone CH251-143I6 from chromosome unknown, complete
              sequence
          Length = 173896

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 91     agttgttgaatctgtggatg 110
              ||||||||||||||||||||
Sbjct: 136034 agttgttgaatctgtggatg 136015
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>emb|BX000491.1|CNS08CDH Oryza sativa chromosome 12, . BAC OSJNBb0068K19 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 96667

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 70    tcaaacaaaataaactatagaagt 93
             ||||||||||||||||| ||||||
Sbjct: 62262 tcaaacaaaataaactagagaagt 62239
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>gb|DP000022.1| Microcebus murinus target 1 genomic scaffold
          Length = 1595145

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 36      ttttgtttaaaaaataaact 55
               ||||||||||||||||||||
Sbjct: 1573392 ttttgtttaaaaaataaact 1573411
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>emb|AJ492794.1|CRU492794 Cynanchum rubricoronae 18S rRNA gene (partial), 5.8S rRNA gene, 26S
           rRNA gene (partial), ITS1 and ITS2
          Length = 663

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 238 ccgcggccaggattatatag 257
           ||||||||||||||||||||
Sbjct: 223 ccgcggccaggattatatag 204
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>dbj|AB002099.1| Candida tropicalis strain IFO 0618 DNA, repeat sequence
          Length = 1400

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 332  cttgggaacaattcttcttccatg 355
            |||||||||||||| |||||||||
Sbjct: 1132 cttgggaacaattcatcttccatg 1109
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>dbj|AP003550.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1639H6, complete
             sequence
          Length = 140609

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    ttcttttgtttaaaaaataa 52
             ||||||||||||||||||||
Sbjct: 60553 ttcttttgtttaaaaaataa 60534


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,957,204
Number of Sequences: 3902068
Number of extensions: 4957204
Number of successful extensions: 107921
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107591
Number of HSP's gapped (non-prelim): 326
length of query: 479
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 457
effective length of database: 17,147,199,772
effective search space: 7836270295804
effective search space used: 7836270295804
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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