ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal34c08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PHT21_ARATH (Q38954) Inorganic phosphate transporter 2-1, chloro... 56 9e-09
2Y962_CHLTR (O84698) Putative phosphate permease CT_962 37 0.033
3Y064_CHLMU (Q9PLN5) Putative phosphate permease TC0064 37 0.044
4Y680_CHLPN (Q9Z7M4) Putative phosphate permease CPn_0680/CP0067/... 35 0.17
5Y2061_PYRKO (Q5JHX4) Putative phosphate permease TK2061 34 0.22
6Y1401_PYRAB (Q9UYV6) Putative phosphate permease PYRAB14010 33 0.37
7Y1604_HAEIN (P45268) Putative phosphate permease HI1604 32 1.1
8Y1798_ARCFU (O28476) Putative phosphate permease AF1798 32 1.4
9LET1_KLULA (P53998) Protein LET1 30 3.1
10Y640_PYRHO (O58374) Putative phosphate permease PH0640 30 4.1
11YE91_HELPJ (Q9ZJC8) Putative phosphate permease jhp_1384 30 5.3
12Y1491_HELPY (O26024) Putative phosphate permease HP1491 30 5.3
13PIT_BUCAI (P57647) Low-affinity inorganic phosphate transporter 30 5.3
14THIC_MYCPA (P61426) Thiamine biosynthesis protein thiC 29 7.0
15PIT_BUCAP (Q8K903) Low-affinity inorganic phosphate transporter 29 9.1

>PHT21_ARATH (Q38954) Inorganic phosphate transporter 2-1, chloroplast precursor|
           (H(+)/Pi cotransporter) (AtPht2;1)
          Length = 587

 Score = 56.2 bits (134), Expect(2) = 9e-09
 Identities = 27/34 (79%), Positives = 30/34 (88%)
 Frame = -2

Query: 494 VRAETVREIVVSWVVTIPVGALLSVVYTLILTKI 393
           VRAETVREIV SW+VTIPVGA L+V+YT I TKI
Sbjct: 549 VRAETVREIVASWLVTIPVGATLAVIYTWIFTKI 582



 Score = 22.3 bits (46), Expect(2) = 9e-09
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = -1

Query: 528 MGVGFAXGLN 499
           MGVGFA GLN
Sbjct: 538 MGVGFARGLN 547



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>Y962_CHLTR (O84698) Putative phosphate permease CT_962|
          Length = 426

 Score = 37.0 bits (84), Expect = 0.033
 Identities = 13/31 (41%), Positives = 23/31 (74%)
 Frame = -2

Query: 494 VRAETVREIVVSWVVTIPVGALLSVVYTLIL 402
           +    +++IV+SW +T+P GA LS+V+ L+L
Sbjct: 391 INLRIIKDIVLSWFITVPAGAALSIVFFLLL 421



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>Y064_CHLMU (Q9PLN5) Putative phosphate permease TC0064|
          Length = 426

 Score = 36.6 bits (83), Expect = 0.044
 Identities = 13/34 (38%), Positives = 24/34 (70%)
 Frame = -2

Query: 494 VRAETVREIVVSWVVTIPVGALLSVVYTLILTKI 393
           +    +++IV+SW VT+P GA LS+++ L+L  +
Sbjct: 391 INLRIIKDIVLSWFVTVPAGAALSIMFFLLLRAV 424



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>Y680_CHLPN (Q9Z7M4) Putative phosphate permease|
           CPn_0680/CP0067/CPj0680/CpB0707
          Length = 426

 Score = 34.7 bits (78), Expect = 0.17
 Identities = 12/31 (38%), Positives = 22/31 (70%)
 Frame = -2

Query: 494 VRAETVREIVVSWVVTIPVGALLSVVYTLIL 402
           +    +++IV+SW +T+P GALLS+++   L
Sbjct: 391 INLNIIKDIVLSWFITLPAGALLSILFFFAL 421



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>Y2061_PYRKO (Q5JHX4) Putative phosphate permease TK2061|
          Length = 406

 Score = 34.3 bits (77), Expect = 0.22
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = -2

Query: 494 VRAETVREIVVSWVVTIPVGALLSVVYTLIL 402
           +  + VR+I++SW VT+PV AL+S     IL
Sbjct: 372 INKDIVRDIIISWFVTVPVAALISAFLFKIL 402



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>Y1401_PYRAB (Q9UYV6) Putative phosphate permease PYRAB14010|
          Length = 405

 Score = 33.5 bits (75), Expect = 0.37
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -2

Query: 494 VRAETVREIVVSWVVTIPVGALLSVVYTLIL 402
           +    VR+I++SW VT+PV  L+S +   IL
Sbjct: 371 INKSIVRDIIISWFVTVPVAGLISAIIFKIL 401



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>Y1604_HAEIN (P45268) Putative phosphate permease HI1604|
          Length = 420

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -2

Query: 479 VREIVVSWVVTIPVGALLSVVYTLILTKI 393
           +R I+ SW+VT+P GA  +++   +L  I
Sbjct: 390 IRNIISSWIVTLPAGAFFAIIIFYVLRTI 418



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>Y1798_ARCFU (O28476) Putative phosphate permease AF1798|
          Length = 333

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 12/32 (37%), Positives = 25/32 (78%), Gaps = 1/32 (3%)
 Frame = -2

Query: 494 VRAETVREIVVSWVVTIPVGALLSV-VYTLIL 402
           V  + V++I+ SW+VT+PV A +++ +YT+++
Sbjct: 299 VNLKIVQKIIFSWIVTVPVAAAMTISLYTMMV 330



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>LET1_KLULA (P53998) Protein LET1|
          Length = 469

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +2

Query: 344 SKQRLYLTKHSHKVFXESWSRL 409
           S + + L+K SHKVF E WS L
Sbjct: 65  SSEEILLSKQSHKVFLEKWSEL 86



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>Y640_PYRHO (O58374) Putative phosphate permease PH0640|
          Length = 406

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 10/32 (31%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
 Frame = -2

Query: 494 VRAETVREIVVSWVVTIPV-GALLSVVYTLIL 402
           +    V++I++SW VT+PV G +  +++ ++L
Sbjct: 372 INKSVVKDIIISWFVTVPVAGIIAGIIFKVLL 403



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>YE91_HELPJ (Q9ZJC8) Putative phosphate permease jhp_1384|
          Length = 533

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = -2

Query: 494 VRAETVREIVVSWVVTIPVGALLSVVYTLIL 402
           ++   +++IV +W+VT+PV ALL  +  + L
Sbjct: 496 IKRSILKKIVTAWLVTVPVSALLGALLFVAL 526



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>Y1491_HELPY (O26024) Putative phosphate permease HP1491|
          Length = 533

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = -2

Query: 494 VRAETVREIVVSWVVTIPVGALLSVVYTLIL 402
           ++   +++IV +W+VT+PV ALL  +  + L
Sbjct: 496 IKRSILKKIVTAWLVTVPVSALLGALLFVAL 526



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>PIT_BUCAI (P57647) Low-affinity inorganic phosphate transporter|
          Length = 490

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 9/24 (37%), Positives = 19/24 (79%)
 Frame = -2

Query: 494 VRAETVREIVVSWVVTIPVGALLS 423
           ++ +T++ I ++W++T+PV  LLS
Sbjct: 456 IQTKTIKNIALAWILTLPVSMLLS 479



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>THIC_MYCPA (P61426) Thiamine biosynthesis protein thiC|
          Length = 540

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = -1

Query: 456 GGHNSSWCFAISR---LYINLDQDS*NTLCECFVRYNLCF 346
           G   ++WC A  R   LY N D+     LCE F RY++ F
Sbjct: 260 GSIMAAWCLAHHRESFLYTNFDE-----LCEIFARYDVTF 294



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>PIT_BUCAP (Q8K903) Low-affinity inorganic phosphate transporter|
          Length = 493

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = -2

Query: 494 VRAETVREIVVSWVVTIPVGALLS 423
           ++  T++ I ++W++T+PV  LLS
Sbjct: 456 IQISTIKNIALAWILTLPVSILLS 479


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,751,943
Number of Sequences: 219361
Number of extensions: 1231718
Number of successful extensions: 2545
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2545
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4027872870
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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