>RLUB_XANAC (Q8PK58) Ribosomal large subunit pseudouridine synthase B (EC|
           5.4.99.-) (rRNA-uridine isomerase B) (rRNA
           pseudouridylate synthase B)
          Length = 550

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
 Frame = -3

Query: 553 TGQAHP---REAGAVQPGVPGRVGAVDGEPRRGQG 458
           TGQA P   +  G  +PG  G VGA  G P RG G
Sbjct: 410 TGQARPYAKKGPGGARPGTGGPVGARSGGPGRGAG 444

>PCLO_RAT (Q9JKS6) Protein piccolo (Aczonin) (Multidomain presynaptic|
            cytomatrix protein)
          Length = 5085

 Score = 24.6 bits (52), Expect(2) = 4.0
 Identities = 18/48 (37%), Positives = 20/48 (41%)
 Frame = +2

Query: 359  TTSVPSWTPPWALSPWKASKLR*MLFTMRTQRKPLPTSRLSVHSTDSS 502
            TT  P+ T P        S +   L T      P PTS LS HS  SS
Sbjct: 2471 TTQKPTDTCPKPTGLSLTSTMSLNLVTSADYNVPSPTSPLSPHSNKSS 2518



 Score = 23.9 bits (50), Expect(2) = 4.0
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 486  TAPTRPGTPGCTAPASRGWAWPV 554
            T P+ PGTP  ++ A    +WP+
Sbjct: 2533 TLPSEPGTPTDSSAAQAITSWPL 2555

>MK03_HUMAN (P27361) Mitogen-activated protein kinase 3 (EC 2.7.11.24)|
           (Extracellular signal-regulated kinase 1) (ERK-1)
           (Insulin-stimulated MAP2 kinase) (MAP kinase 1) (MAPK 1)
           (p44-ERK1) (ERT2) (p44-MAPK) (Microtubule-associated
           protein 2 kinase)
          Length = 379

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = -3

Query: 550 GQAHPREAGAVQPGVPGRVGAVDGEP 473
           G   PR    V PGVPG V  V G+P
Sbjct: 10  GGGEPRRTEGVGPGVPGEVEMVKGQP 35

>GPC6A_RAT (Q70VB1) G-protein coupled receptor family C group 6 member A|
           precursor
          Length = 928

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = -1

Query: 414 DAFHGDKAHGGVHDGTEVVLWKWCEG 337
           ++FH D AHG ++ G EVVLWK   G
Sbjct: 460 NSFHFD-AHGDLNTGYEVVLWKETNG 484


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,754,415
Number of Sequences: 219361
Number of extensions: 1162604
Number of successful extensions: 4699
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4698
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4757699440
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)