>PAO_ARATH (Q9FYC2) Pheophorbide a oxygenase, chloroplast precursor (EC|
           1.-.-.-) (Pheide a oxygenase) (AtPaO) (Accelerated cell
           death 1) (Lethal leaf-spot 1 homolog) (Lls1)
          Length = 537

 Score =  103 bits (257), Expect = 4e-22
 Identities = 67/183 (36%), Positives = 96/183 (52%), Gaps = 11/183 (6%)
 Frame = -1

Query: 606 KVIPRWYYHIGQNAILDSDIYLLHIEERNFAAAGVEN--------WQKAVYVPTSSDNMV 451
           +V+PRWY H   N + D D+ +L  +E+ F A  +E+        + K  + PT +D  V
Sbjct: 358 QVVPRWYEHWTSNLVYDGDMIVLQGQEKVFLAKSMESPDYDVNKQYTKLTFTPTQADRFV 417

Query: 450 IAFRNWFRKHCKSQVGW--AAPTIGQLPETP-TKDKLMERYWSHVAQCRSCSTALKTMKA 280
           +AFRNW R+H KSQ  W  + P+   LP T  TK ++++R+  H   C SC  A  + + 
Sbjct: 418 LAFRNWLRRHGKSQPEWFGSTPSNQPLPSTVLTKRQMLDRFDQHTQVCSSCKGAYNSFQI 477

Query: 279 LEVALQVASVAVVGFLAVAKGTLVTSVVQRAAVVTLAVLCFAASRWLASFIEKNFYFQDY 100
           L+  L  A+V    F A   G  V S VQ   V+    L  AAS +     EKNF F+DY
Sbjct: 478 LKKFLVGATV----FWAATAG--VPSDVQIRLVLAGLSLISAASAYALHEQEKNFVFRDY 531

Query: 99  VHA 91
           VH+
Sbjct: 532 VHS 534

>MYO2_CAEEL (P12845) Myosin-2 (Myosin heavy chain C) (MHC C)|
          Length = 1947

 Score = 35.4 bits (80), Expect = 0.14
 Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
 Frame = -3

Query: 502  RKLAESRVRADVVGQHGDRLQELVQKALQESGRLGRPDDRS-VTRDSNQRQAHGEVLVAR 326
            +KL E    A+      ++L+  + ++L++S +    + R+    D N+R+A GE+ +A+
Sbjct: 1020 KKLTEDLQAAEEQNLAANKLKAKLMQSLEDSEQTMEREKRNRADMDKNKRKAEGELKIAQ 1079

Query: 325  RAVQELQHGAEDHESA 278
              ++EL     D E+A
Sbjct: 1080 ETLEELNKSKSDAENA 1095

>RECX_DEIRA (Q9RUS2) Regulatory protein recX|
          Length = 204

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 23/75 (30%), Positives = 39/75 (52%)
 Frame = -3

Query: 517 RCGGRRKLAESRVRADVVGQHGDRLQELVQKALQESGRLGRPDDRSVTRDSNQRQAHGEV 338
           R  G R + E+ +R  +  +  D   ELV++ L+    LG  +D  V R  N+R+  GE+
Sbjct: 62  RALGARAITEAELRGKLERRSED--PELVEEVLRRVQELGYQNDAEVARAENKRRGVGEL 119

Query: 337 LVARRAVQELQHGAE 293
            V R+ ++    GA+
Sbjct: 120 RV-RQTLRRRGLGAD 133

>FILA_HUMAN (P20930) Filaggrin|
          Length = 4061

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 27/90 (30%), Positives = 39/90 (43%)
 Frame = -3

Query: 613  ARQGHTAVVLPHRPERYPGLRHLPPPHRGAQLRCGGRRKLAESRVRADVVGQHGDRLQEL 434
            A  GH+A        R  G RH       A+   GG+   ++ + R+    +HG R Q+ 
Sbjct: 1641 ASHGHSA-----ESSRQSGTRH-------AETSSGGQAASSQEQARSSPGERHGSRHQQS 1688

Query: 433  VQKALQESGRLGRPDDRSVTRDSNQRQAHG 344
               +  +SG  GR  D SV  DS  R + G
Sbjct: 1689 ADSS-TDSG-TGRRQDSSVVGDSGNRGSSG 1716

>MBN3_MOUSE (Q8R003) Muscleblind-like X-linked protein (Muscleblind-like|
           protein 3) (Cys3His CCG1-required protein) (MCHCR
           protein)
          Length = 342

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -3

Query: 544 PPPHRGAQLRCGGRRKLAESRVRADVVGQHGDRLQELVQKALQES 410
           PPPH  +QL   GR  L + +  A +  QH   +Q ++Q A   S
Sbjct: 72  PPPHLKSQLEVNGRNNLIQQKTAAAMFAQH---MQLMLQNAQMSS 113

>ZN407_HUMAN (Q9C0G0) Zinc finger protein 407 (Fragment)|
          Length = 1165

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
 Frame = +1

Query: 1   MCLCTLSKAASAQELQNPNNGRRMIWPSLVGMDVILEIEVLLDEAGEPAGRGEAQHRQCH 180
           M L   S   S    QN N+G      S +  +   +   + ++AGE     E +     
Sbjct: 101 MSLTMSSNYGSPSRFQNENSGS-----SALNCETAKKNHEISNDAGELRVHCEGEGGNAG 155

Query: 181 DGGSLHDRRH*CPL---GDRKETD-----DRHRRDLQGNLQRFHGLQRRAAAPALRDVRP 336
           DGG +   RH CP+   G+R          R  R+ QGNL+   G  R A    L D++ 
Sbjct: 156 DGGGVVPHRHLCPVTLDGERSAESPVLVVTRITRE-QGNLES-GGQNRVARGHGLEDLKG 213

Query: 337 V 339
           V
Sbjct: 214 V 214

>KRA92_HUMAN (Q9BYQ4) Keratin-associated protein 9-2 (Keratin-associated protein|
           9.2) (Ultrahigh sulfur keratin-associated protein 9.2)
          Length = 174

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 3/63 (4%)
 Frame = +3

Query: 447 RSPCCPTTSARTRLSASFRRPPQRS---CAPRCGGGRCLSPG*RSGRCGSTTAV*PCRAR 617
           ++ CC TT  +     S  +P   S   C P C G  C         CG +++  P   R
Sbjct: 58  QNTCCRTTCCQPTCVTSCCQPSCCSTPCCQPTCCGSSCCGQTSCGSSCGQSSSCAPVYCR 117

Query: 618 RRC 626
           R C
Sbjct: 118 RTC 120

>P2RY8_HUMAN (Q86VZ1) P2Y purinoceptor 8 (P2Y8)|
          Length = 359

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
 Frame = -1

Query: 189 AAVVTLA-VLCFAASRW--LASFIEKNFYFQDYVHAYK 85
           AAVV LA V CFA + +  LA  + + FY + Y H YK
Sbjct: 239 AAVVLLAFVTCFAPNNFVLLAHIVSRLFYGKSYYHVYK 276

>TENX_HUMAN (P22105) Tenascin-X precursor (TN-X) (Hexabrachion-like protein)|
          Length = 4289

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 7/44 (15%)
 Frame = +3

Query: 516 RSCAPRCG-GGRCLS------PG*RSGRCGSTTAV*PCRARRRC 626
           RSC   CG GGRC+       PG     C + T    CR R RC
Sbjct: 340 RSCPWDCGEGGRCVDGRCVCWPGYTGEDCSTRTCPRDCRGRGRC 383



 Score = 29.6 bits (65), Expect = 7.6
 Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
 Frame = +3

Query: 531 RCGGGRCLS-PG*RSGRCGSTTAV*PCRARRRC 626
           RC  GRC+  PG     CGS      CR R RC
Sbjct: 413 RCEDGRCVCWPGYTGTDCGSRACPRDCRGRGRC 445



 Score = 29.3 bits (64), Expect = 10.0
 Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
 Frame = +3

Query: 531 RCGGGRCLS-PG*RSGRCGSTTAV*PCRARRRC 626
           RC  GRC+  PG     CG+      CR R RC
Sbjct: 475 RCESGRCMCWPGYTGRDCGTRACPGDCRGRGRC 507

>TOP1_STRCO (Q9X909) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
            (Omega-protein) (Relaxing enzyme) (Untwisting enzyme)
            (Swivelase)
          Length = 952

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = +2

Query: 131  KLASQRDAAKHSTANVTTAALCTTDVTSVPLATARKPTTATDATCRATSS 280
            K A+++  AK + A   TAA  TT        +  K TTA  A  +AT+S
Sbjct: 898  KTAAKKAPAKKAAATKKTAAAKTTAAKKTAAKSTAKKTTAKTAAKKATAS 947

>TKT_MYCLE (P46708) Transketolase (EC 2.2.1.1) (TK)|
          Length = 699

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 17/47 (36%), Positives = 19/47 (40%)
 Frame = +1

Query: 307 AAPALRDVRPVPLHELVFGWSLW*LTDRRGGPADLTLAVLSEPVPEG 447
           A P L  VRP   +E  + W          GP  L L   S PV EG
Sbjct: 514 AIPRLSVVRPADANETAYAWRTILARGANSGPVGLILTRQSVPVLEG 560

>DAN4_YEAST (P47179) Cell wall protein DAN4 precursor|
          Length = 1161

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +2

Query: 164 STANVTTAALCTTDVTSVPLATARKPTTATDATCRATSS 280
           +T   +T+   TT +TS    T+  PTT+T +T   TS+
Sbjct: 128 TTTKSSTSTTPTTTITSTTSTTSTTPTTSTTSTTPTTST 166

>VGLX_EHV1B (P28968) Glycoprotein X precursor|
          Length = 797

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 16/40 (40%), Positives = 18/40 (45%)
 Frame = +2

Query: 164 STANVTTAALCTTDVTSVPLATARKPTTATDATCRATSSA 283
           +T   TT A  TT  T+    T    TTA   T   TSSA
Sbjct: 189 TTTAATTTAATTTAATTTAATTTAATTTAATTTAATTSSA 228

>SGS3_DROME (P02840) Salivary glue protein Sgs-3 precursor|
          Length = 307

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = +2

Query: 155 AKHSTANVTTAAL-CTTDVTSVPLATARKPTTATDATCRATSSAFMVFSAVLQLLHCAT 328
           +K +T   TT  L CTT  T+   AT  KPTT    T +AT++           L C T
Sbjct: 71  SKPTTPKQTTTQLPCTTPTTTK--ATTTKPTTTKATTTKATTTKPTTTKQTTTQLPCTT 127

>GPDA_SERMA (Q8KRM1) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)|
           (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
          Length = 340

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 38/115 (33%), Positives = 46/115 (40%), Gaps = 13/115 (11%)
 Frame = -3

Query: 616 LARQGHTAVVLPHRPERYPGLRH-------LP--PPHRGAQLRCGGRRKLAESRVRADVV 464
           LAR GH+ V+  H P +   L+H       LP  P      L     R LA SR    VV
Sbjct: 24  LARNGHSVVLWGHNPAQIQTLQHDRCNQAFLPDVPFPDTLLLEADLARALAASRDVLVVV 83

Query: 463 GQH--GDRLQELVQKALQESGRLGRPDDRSVTRDSNQRQAHGEVL--VARRAVQE 311
             H  GD L++L            RPD R V          G +L  VAR A+ E
Sbjct: 84  PSHVFGDVLRQLKPHL--------RPDARIVWATKGLEAETGRLLQNVAREALGE 130

>ACDA_METTH (O27743) Acetyl-CoA decarbonylase/synthase complex alpha subunit|
           (EC 1.2.99.2) (ACDS complex alpha subunit) (ACDS complex
           carbon monoxide dehydrogenase) (ACDS CODH)
          Length = 780

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 24/83 (28%), Positives = 33/83 (39%)
 Frame = -3

Query: 469 VVGQHGDRLQELVQKALQESGRLGRPDDRSVTRDSNQRQAHGEVLVARRAVQELQHGAED 290
           V+G HG + + L          LGR DD    +  + R   GEV+    A + L + AE+
Sbjct: 647 VLGPHGSKYRRLF---------LGRADDEEKWKLKDLRT--GEVIDGEPAPEHLLYAAEN 695

Query: 289 HESAXXXXXXXXXXXXRFPCGRQ 221
            E A              P GRQ
Sbjct: 696 REEATVMIAKLCIRPTDTPKGRQ 718

>PSPB_RABIT (P15285) Pulmonary surfactant-associated protein B precursor (SP-B)|
           (6 kDa protein) (Pulmonary surfactant-associated
           proteolipid SPL(Phe))
          Length = 370

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
 Frame = -1

Query: 387 IGQLPETP---TKDKLMERYWSHVAQCRSCSTALKTMKAL----EVALQVASVAVVGFLA 229
           +G LP  P   T+D   +R+   +  C  C T LK ++A+     +A+ VA V  V  L 
Sbjct: 166 LGALPAKPGPHTQDLSAQRFPIPLPLCWLCRTLLKRIQAMIPKGVLAMAVAQVCHVVPLV 225

Query: 228 VAKGTLVTSVVQRAAVVTLAVL 163
           V  G +   + +R  V+ L VL
Sbjct: 226 V--GGICQCLAERYTVILLEVL 245

>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor|
          Length = 866

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 16/40 (40%), Positives = 18/40 (45%)
 Frame = +2

Query: 164 STANVTTAALCTTDVTSVPLATARKPTTATDATCRATSSA 283
           +T   TT A  TT  T+    T    TTA   T   TSSA
Sbjct: 204 TTTAATTTAATTTAATTTAATTTAATTTAATTTAATTSSA 243

>KRA93_HUMAN (Q9BYQ3) Keratin-associated protein 9-3 (Keratin-associated protein|
           9.3) (Ultrahigh sulfur keratin-associated protein 9.3)
          Length = 159

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 18/61 (29%), Positives = 23/61 (37%), Gaps = 3/61 (4%)
 Frame = +3

Query: 453 PCC-PTTSARTRLSASFRRP--PQRSCAPRCGGGRCLSPG*RSGRCGSTTAV*PCRARRR 623
           PCC PT    T    +  +P      C P C    C  P      CG +++  P   RR 
Sbjct: 45  PCCHPTCCQNTCCRTTCCQPICVTSCCQPSCCSTPCCQPTCCGSSCGQSSSCAPVYCRRT 104

Query: 624 C 626
           C
Sbjct: 105 C 105

>SP96_DICDI (P14328) Spore coat protein SP96|
          Length = 600

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +2

Query: 152 AAKHSTANVTTAALCTTDVTSVPLATARKPTTATDATCRATSSA 283
           A   +T   TTA      + +   AT    TTAT AT  AT++A
Sbjct: 555 ATTATTTATTTATTTAATIATTTAATTTATTTATTATTTATTTA 598


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,136,900
Number of Sequences: 219361
Number of extensions: 1517756
Number of successful extensions: 5526
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 5227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5519
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5767334219
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)