| Clone Name | rbaal34a06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY236152.1| Triticum aestivum cytosolic malate dehydrogenase mRNA, partial cds Length = 683 Score = 426 bits (215), Expect = e-116 Identities = 239/247 (96%) Strand = Plus / Minus Query: 1 agagcttcctcgctttgatgattgcagcgccacgctgctggacagtggcaatgaactccc 60 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 637 agagcttcctcgctttgatgattgcagcaccacgctgctggacagtggcaatgaactccc 578 Query: 61 cattcagccattcatcatcttgaacaagttcacgaacaggcttctctccactggcagtct 120 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 577 catttagccattcatcatcttgaacaagttcacgaacaggcttctctccactgggagtct 518 Query: 121 tcacagtggcatggttaacatcaggatactgactggaagagtgattaccccagataatag 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 517 tcacagtggcatggttaacatcaggatactgactggacgagtgattaccccagataatag 458 Query: 181 cattcttcacgtcagaaacttggacattaagtctctcagagatctgaccgagtgccctgt 240 ||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||| Sbjct: 457 cattcttaacgtcagaaacttggacaccaagtctctcagaaatctgaccgagtgccctgt 398 Query: 241 tgtggtc 247 ||||||| Sbjct: 397 tgtggtc 391
>gb|BT016453.1| Zea mays clone Contig286 mRNA sequence Length = 1354 Score = 204 bits (103), Expect = 9e-50 Identities = 205/239 (85%) Strand = Plus / Minus Query: 9 ctcgctttgatgattgcagcgccacgctgctggacagtggcaatgaactccccattcagc 68 |||||||| ||||||||||| |||||||| |||||||| | ||||| || ||||| ||| Sbjct: 802 ctcgctttaatgattgcagcaccacgctgttggacagttgtgatgaattcaccattaagc 743 Query: 69 cattcatcatcttgaacaagttcacgaacaggcttctctccactggcagtcttcacagtg 128 || || ||||| ||||| ||||||||||||||||| ||| ||| ||||||||| ||| Sbjct: 742 cactcgtcatcagagacaagctcacgaacaggcttctccccagtggaagtcttcactgtg 683 Query: 129 gcatggttaacatcaggatactgactggaagagtgattaccccagataatagcattcttc 188 ||||||||||||||||| |||||| ||| ||||| ||||||||||| ||| |||||||| Sbjct: 682 gcatggttaacatcagggtactgagaggacgagtggttaccccagatgataacattcttc 623 Query: 189 acgtcagaaacttggacattaagtctctcagagatctgaccgagtgccctgttgtggtc 247 || ||| |||||||||||||||||||||||| ||||| || || |||||||||||||| Sbjct: 622 acatcactaacttggacattaagtctctcagaaatctggccaagagccctgttgtggtc 564
>gb|AF007581.1|AF007581 Zea mays cytoplasmic malate dehydrogenase mRNA, complete cds Length = 1275 Score = 204 bits (103), Expect = 9e-50 Identities = 205/239 (85%) Strand = Plus / Minus Query: 9 ctcgctttgatgattgcagcgccacgctgctggacagtggcaatgaactccccattcagc 68 |||||||| ||||||||||| |||||||| |||||||| | ||||| || ||||| ||| Sbjct: 793 ctcgctttaatgattgcagcaccacgctgttggacagttgtgatgaattcaccattaagc 734 Query: 69 cattcatcatcttgaacaagttcacgaacaggcttctctccactggcagtcttcacagtg 128 || || ||||| ||||| ||||||||||||||||| ||| ||| ||||||||| ||| Sbjct: 733 cactcgtcatcagagacaagctcacgaacaggcttctccccagtggaagtcttcactgtg 674 Query: 129 gcatggttaacatcaggatactgactggaagagtgattaccccagataatagcattcttc 188 ||||||||||||||||| |||||| ||| ||||| ||||||||||| ||| |||||||| Sbjct: 673 gcatggttaacatcagggtactgagaggacgagtggttaccccagatgataacattcttc 614 Query: 189 acgtcagaaacttggacattaagtctctcagagatctgaccgagtgccctgttgtggtc 247 || ||| |||||||||||||||||||||||| ||||| || || |||||||||||||| Sbjct: 613 acatcactaacttggacattaagtctctcagaaatctggccaagagccctgttgtggtc 555
>ref|NM_197014.1| Oryza sativa (japonica cultivar-group) cytoplasmic malate dehydrogenase (OSJNBa0055P24.3), mRNA Length = 1381 Score = 190 bits (96), Expect = 1e-45 Identities = 207/244 (84%) Strand = Plus / Minus Query: 4 gcttcctcgctttgatgattgcagcgccacgctgctggacagtggcaatgaactccccat 63 |||||||||| |||||||| || || |||||||||||||| || | ||||| ||| || Sbjct: 819 gcttcctcgccttgatgatggcggcaccacgctgctggacggtagagatgaattccgtat 760 Query: 64 tcagccattcatcatcttgaacaagttcacgaacaggcttctctccactggcagtcttca 123 | | ||| |||||||| ||| ||||| | ||||||||||||||||||| |||||||| Sbjct: 759 ttaaccactcatcatcagcaacgagttccctgacaggcttctctccactgggagtcttca 700 Query: 124 cagtggcatggttaacatcaggatactgactggaagagtgattaccccagataatagcat 183 ||||||| |||||||||||||| ||||| |||| ||||| || |||||||| || |||| Sbjct: 699 cagtggcgtggttaacatcagggtactgggtggatgagtggttgccccagatgatcgcat 640 Query: 184 tcttcacgtcagaaacttggacattaagtctctcagagatctgaccgagtgccctgttgt 243 ||||||| |||| |||||||||||||||| | ||||||||||| || ||||||||||||| Sbjct: 639 tcttcacatcagtaacttggacattaagtttttcagagatctggccaagtgccctgttgt 580 Query: 244 ggtc 247 |||| Sbjct: 579 ggtc 576
>dbj|AK104691.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-G07, full insert sequence Length = 1326 Score = 190 bits (96), Expect = 1e-45 Identities = 207/244 (84%) Strand = Plus / Minus Query: 4 gcttcctcgctttgatgattgcagcgccacgctgctggacagtggcaatgaactccccat 63 |||||||||| |||||||| || || |||||||||||||| || | ||||| ||| || Sbjct: 825 gcttcctcgccttgatgatggcggcaccacgctgctggacggtagagatgaattccgtat 766 Query: 64 tcagccattcatcatcttgaacaagttcacgaacaggcttctctccactggcagtcttca 123 | | ||| |||||||| ||| ||||| | ||||||||||||||||||| |||||||| Sbjct: 765 ttaaccactcatcatcagcaacgagttccctgacaggcttctctccactgggagtcttca 706 Query: 124 cagtggcatggttaacatcaggatactgactggaagagtgattaccccagataatagcat 183 ||||||| |||||||||||||| ||||| |||| ||||| || |||||||| || |||| Sbjct: 705 cagtggcgtggttaacatcagggtactgggtggatgagtggttgccccagatgatcgcat 646 Query: 184 tcttcacgtcagaaacttggacattaagtctctcagagatctgaccgagtgccctgttgt 243 ||||||| |||| |||||||||||||||| | ||||||||||| || ||||||||||||| Sbjct: 645 tcttcacatcagtaacttggacattaagtttttcagagatctggccaagtgccctgttgt 586 Query: 244 ggtc 247 |||| Sbjct: 585 ggtc 582
>dbj|AK066396.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013064D20, full insert sequence Length = 1392 Score = 190 bits (96), Expect = 1e-45 Identities = 207/244 (84%) Strand = Plus / Minus Query: 4 gcttcctcgctttgatgattgcagcgccacgctgctggacagtggcaatgaactccccat 63 |||||||||| |||||||| || || |||||||||||||| || | ||||| ||| || Sbjct: 830 gcttcctcgccttgatgatggcggcaccacgctgctggacggtagagatgaattccgtat 771 Query: 64 tcagccattcatcatcttgaacaagttcacgaacaggcttctctccactggcagtcttca 123 | | ||| |||||||| ||| ||||| | ||||||||||||||||||| |||||||| Sbjct: 770 ttaaccactcatcatcagcaacgagttccctgacaggcttctctccactgggagtcttca 711 Query: 124 cagtggcatggttaacatcaggatactgactggaagagtgattaccccagataatagcat 183 ||||||| |||||||||||||| ||||| |||| ||||| || |||||||| || |||| Sbjct: 710 cagtggcgtggttaacatcagggtactgggtggatgagtggttgccccagatgatcgcat 651 Query: 184 tcttcacgtcagaaacttggacattaagtctctcagagatctgaccgagtgccctgttgt 243 ||||||| |||| |||||||||||||||| | ||||||||||| || ||||||||||||| Sbjct: 650 tcttcacatcagtaacttggacattaagtttttcagagatctggccaagtgccctgttgt 591 Query: 244 ggtc 247 |||| Sbjct: 590 ggtc 587
>gb|AF353203.1| Oryza sativa cytoplasmic malate dehydrogenase mRNA, complete cds Length = 1371 Score = 190 bits (96), Expect = 1e-45 Identities = 207/244 (84%) Strand = Plus / Minus Query: 4 gcttcctcgctttgatgattgcagcgccacgctgctggacagtggcaatgaactccccat 63 |||||||||| |||||||| || || |||||||||||||| || | ||||| ||| || Sbjct: 810 gcttcctcgccttgatgatggcggcaccacgctgctggacggtagagatgaattccgtat 751 Query: 64 tcagccattcatcatcttgaacaagttcacgaacaggcttctctccactggcagtcttca 123 | | ||| |||||||| ||| ||||| | ||||||||||||||||||| |||||||| Sbjct: 750 ttaaccactcatcatcagcaacgagttccctgacaggcttctctccactgggagtcttca 691 Query: 124 cagtggcatggttaacatcaggatactgactggaagagtgattaccccagataatagcat 183 ||||||| |||||||||||||| ||||| |||| ||||| || |||||||| || |||| Sbjct: 690 cagtggcgtggttaacatcagggtactgggtggatgagtggttgccccagatgatcgcat 631 Query: 184 tcttcacgtcagaaacttggacattaagtctctcagagatctgaccgagtgccctgttgt 243 ||||||| |||| |||||||||||||||| | ||||||||||| || ||||||||||||| Sbjct: 630 tcttcacatcagtaacttggacattaagtttttcagagatctggccaagtgccctgttgt 571 Query: 244 ggtc 247 |||| Sbjct: 570 ggtc 567
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 174 bits (88), Expect = 8e-41 Identities = 136/152 (89%) Strand = Plus / Minus Query: 96 acaggcttctctccactggcagtcttcacagtggcatggttaacatcaggatactgactg 155 ||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||| || Sbjct: 17401815 acaggcttctctccactgggagtcttcacagtggcgtggttaacatcagggtactgggtg 17401756 Query: 156 gaagagtgattaccccagataatagcattcttcacgtcagaaacttggacattaagtctc 215 || ||||| || |||||||| || ||||||||||| |||| |||||||||||||||| | Sbjct: 17401755 gatgagtggttgccccagatgatcgcattcttcacatcagtaacttggacattaagtttt 17401696 Query: 216 tcagagatctgaccgagtgccctgttgtggtc 247 ||||||||||| || ||||||||||||||||| Sbjct: 17401695 tcagagatctggccaagtgccctgttgtggtc 17401664 Score = 48.1 bits (24), Expect = 0.013 Identities = 36/40 (90%) Strand = Plus / Minus Query: 4 gcttcctcgctttgatgattgcagcgccacgctgctggac 43 |||||||||| |||||||| || || |||||||||||||| Sbjct: 17402002 gcttcctcgccttgatgatggcggcaccacgctgctggac 17401963
>gb|AC037425.7|AC037425 Oryza sativa chromosome 10 BAC OSJNBa0055P24 genomic sequence, complete sequence Length = 134058 Score = 174 bits (88), Expect = 8e-41 Identities = 136/152 (89%) Strand = Plus / Minus Query: 96 acaggcttctctccactggcagtcttcacagtggcatggttaacatcaggatactgactg 155 ||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||| || Sbjct: 30810 acaggcttctctccactgggagtcttcacagtggcgtggttaacatcagggtactgggtg 30751 Query: 156 gaagagtgattaccccagataatagcattcttcacgtcagaaacttggacattaagtctc 215 || ||||| || |||||||| || ||||||||||| |||| |||||||||||||||| | Sbjct: 30750 gatgagtggttgccccagatgatcgcattcttcacatcagtaacttggacattaagtttt 30691 Query: 216 tcagagatctgaccgagtgccctgttgtggtc 247 ||||||||||| || ||||||||||||||||| Sbjct: 30690 tcagagatctggccaagtgccctgttgtggtc 30659 Score = 48.1 bits (24), Expect = 0.013 Identities = 36/40 (90%) Strand = Plus / Minus Query: 4 gcttcctcgctttgatgattgcagcgccacgctgctggac 43 |||||||||| |||||||| || || |||||||||||||| Sbjct: 30997 gcttcctcgccttgatgatggcggcaccacgctgctggac 30958
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 174 bits (88), Expect = 8e-41 Identities = 136/152 (89%) Strand = Plus / Minus Query: 96 acaggcttctctccactggcagtcttcacagtggcatggttaacatcaggatactgactg 155 ||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||| || Sbjct: 17410855 acaggcttctctccactgggagtcttcacagtggcgtggttaacatcagggtactgggtg 17410796 Query: 156 gaagagtgattaccccagataatagcattcttcacgtcagaaacttggacattaagtctc 215 || ||||| || |||||||| || ||||||||||| |||| |||||||||||||||| | Sbjct: 17410795 gatgagtggttgccccagatgatcgcattcttcacatcagtaacttggacattaagtttt 17410736 Query: 216 tcagagatctgaccgagtgccctgttgtggtc 247 ||||||||||| || ||||||||||||||||| Sbjct: 17410735 tcagagatctggccaagtgccctgttgtggtc 17410704 Score = 48.1 bits (24), Expect = 0.013 Identities = 36/40 (90%) Strand = Plus / Minus Query: 4 gcttcctcgctttgatgattgcagcgccacgctgctggac 43 |||||||||| |||||||| || || |||||||||||||| Sbjct: 17411042 gcttcctcgccttgatgatggcggcaccacgctgctggac 17411003
>gb|AF346003.1|AF346003 Lolium perenne malate dehydrogenase mRNA, partial cds Length = 587 Score = 111 bits (56), Expect = 1e-21 Identities = 71/76 (93%) Strand = Plus / Minus Query: 1 agagcttcctcgctttgatgattgcagcgccacgctgctggacagtggcaatgaactccc 60 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 76 agagcttcctcgctttgatgattgcagcaccacgctgctggacagtggcaatgaaccctg 17 Query: 61 cattcagccattcatc 76 |||| ||||||||||| Sbjct: 16 catttagccattcatc 1
>emb|X96539.1|MCMDH M.crystallinum mRNA for malate dehydrogenase Length = 1273 Score = 101 bits (51), Expect = 1e-18 Identities = 198/247 (80%) Strand = Plus / Minus Query: 1 agagcttcctcgctttgatgattgcagcgccacgctgctggacagtggcaatgaactccc 60 |||||||||| || |||||||| ||||| |||||||| || ||||| | |||||||| | Sbjct: 810 agagcttccttgccttgatgatggcagctccacgctgttgcacagttgttatgaactctc 751 Query: 61 cattcagccattcatcatcttgaacaagttcacgaacaggcttctctccactggcagtct 120 |||||| |||| ||||||| |||||| |||||||||||||| || ||| || | Sbjct: 750 cattcaaccatgcatcatcagcaacaagctcacgaacaggcttatcaacaccctgtgttt 691 Query: 121 tcacagtggcatggttaacatcaggatactgactggaagagtgattaccccagataatag 180 |||| || || ||||| |||||||| || ||| | || ||||| || ||||| ||||| Sbjct: 690 tcacggtagcgtggttgacatcagggtattgagttgaggagtggtttccccaaataatca 631 Query: 181 cattcttcacgtcagaaacttggacattaagtctctcagagatctgaccgagtgccctgt 240 ||||||| || ||||| ||||| ||||| | |||||| ||||||||||| || || |||| Sbjct: 630 cattcttaacatcagagacttgaacattcaatctctctgagatctgacctagagctctgt 571 Query: 241 tgtggtc 247 ||||||| Sbjct: 570 tgtggtc 564
>gb|AF367442.1| Prunus persica clone Mdh1 NAD-dependent malate dehydrogenase (mdh1) mRNA, complete cds Length = 1491 Score = 87.7 bits (44), Expect = 2e-14 Identities = 152/188 (80%) Strand = Plus / Minus Query: 15 ttgatgattgcagcgccacgctgctggacagtggcaatgaactccccattcagccattca 74 |||||||||||||| ||||| || || ||||||| |||||| || || ||| |||| || Sbjct: 710 ttgatgattgcagcaccacgttgttgaacagtggtaatgaattctccggtcaaccatgca 651 Query: 75 tcatcttgaacaagttcacgaacaggcttctctccactggcagtcttcacagtggcatgg 134 ||||| |||||| |||||||||| ||||||||| | ||||| ||||| |||||| Sbjct: 650 tcatcagcaacaagctcacgaacagctttctctccagaaggtgtcttgacagttgcatgg 591 Query: 135 ttaacatcaggatactgactggaagagtgattaccccagataatagcattcttcacgtca 194 || |||||||||||||| || ||||| || |||||||||||| |||| || || ||| Sbjct: 590 ttgacatcaggatactgtgatgatgagtggtttccccagataataacatttttaacatca 531 Query: 195 gaaacttg 202 |||||||| Sbjct: 530 gaaacttg 523
>gb|AF459645.1| Lupinus albus malate dehydrogenase (MDH1) mRNA, complete cds Length = 1290 Score = 87.7 bits (44), Expect = 2e-14 Identities = 193/240 (80%), Gaps = 2/240 (0%) Strand = Plus / Minus Query: 3 agcttcctcgctttgatgattgcagcgccacgctgctggacagtggcaatgaactcccca 62 ||||| || ||||| || |||||||| ||||| || |||||||| || ||||| ||| | Sbjct: 774 agctttctagctttaataattgcagcaccacgttgttggacagtagctatgaattccgaa 715 Query: 63 ttcagccattcatcatcttgaacaagttcacgaacaggcttctctcca-ctggcagtctt 121 |||| |||| ||||||| ||||||||||||||||||||| || || |||| || | Sbjct: 714 ttcaaccatgcatcatcagcaacaagttcacgaacaggcttttcccctgctggg-gttgt 656 Query: 122 cacagtggcatggttaacatcaggatactgactggaagagtgattaccccagataatagc 181 ||||| |||||||| ||||||||||||||| || || || |||||||| || ||| | Sbjct: 655 aacagttgcatggttgacatcaggatactgagatgatgaatggttaccccatattataac 596 Query: 182 attcttcacgtcagaaacttggacattaagtctctcagagatctgaccgagtgccctgtt 241 ||| || || ||||||||||| || || ||||| ||||| || ||||| ||||||||||| Sbjct: 595 attttttacatcagaaacttgaacgttcagtctttcagaaatttgacccagtgccctgtt 536
>emb|AJ299059.1|CAR299059 Cicer arietinum mRNA for cytosolic malate dehydrogenase (ORF1), clone CanCMDH Length = 1399 Score = 81.8 bits (41), Expect = 9e-13 Identities = 154/189 (81%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 15 ttgatgattgcagcgccacgctgctggacagtggcaatgaactccccattcagccattca 74 ||||| |||||||| ||||| || || ||||| | ||||| |||||||||| ||| || Sbjct: 776 ttgataattgcagcaccacgttgttgaacagttggtatgaattccccattcaaccaggca 717 Query: 75 tcatcttgaacaagttcacgaacaggcttctctcca-ctggcagtcttcacagtggcatg 133 ||||| |||||||||||| ||||||||||| ||| |||| ||| || ||||| ||||| Sbjct: 716 tcatcagaaacaagttcacggacaggcttctccccagctgg-agttttaacagttgcatg 658 Query: 134 gttaacatcaggatactgactggaagagtgattaccccagataatagcattcttcacgtc 193 | | ||||| ||||||||| | || || |||||||||||||| || ||||||| | || Sbjct: 657 ggtgacatcgggatactgagttgatgaatgattaccccagattatgacattctttatttc 598 Query: 194 agaaacttg 202 ||||||||| Sbjct: 597 agaaacttg 589
>gb|AF020272.1|AF020272 Medicago sativa cytosolic malate dehydrogenase (cmdh) mRNA, complete cds Length = 1397 Score = 81.8 bits (41), Expect = 9e-13 Identities = 154/189 (81%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 21 attgcagcgccacgctgctggacagtggcaatgaactccccattcagccattcatcatct 80 |||||||| ||||| || || ||||||| |||||| || ||||||| |||| |||| || Sbjct: 765 attgcagcaccacgttgttgaacagtggaaatgaattctccattcaaccatgcatcgtcg 706 Query: 81 tgaacaagttcacgaacaggcttctctcca-ctggcagtcttcacagtggcatggttaac 139 |||||||| ||| || |||||||| ||| |||| || || ||||| |||||||| || Sbjct: 705 gaaacaagttgacggacgggcttctccccagctggg-gtgttaacagttgcatggttgac 647 Query: 140 atcaggatactgactggaagagtgattaccccagataatagcattcttcacgtcagaaac 199 |||||||||||| | || || |||||||||||||| || ||||||| || |||||||| Sbjct: 646 atcaggatactgggttgatgaatgattaccccagattatgacattctttacatcagaaac 587 Query: 200 ttggacatt 208 ||| ||||| Sbjct: 586 ttgaacatt 578
>gb|AY109362.1| Zea mays CL1892_2 mRNA sequence Length = 943 Score = 81.8 bits (41), Expect = 9e-13 Identities = 68/77 (88%) Strand = Plus / Minus Query: 168 ccccagataatagcattcttcacgtcagaaacttggacattaagtctctcagagatctga 227 |||||||| ||| |||||||||| ||| |||||||||||||||||||||||| ||||| Sbjct: 572 ccccagatgataacattcttcacatcactaacttggacattaagtctctcagaaatctgg 513 Query: 228 ccgagtgccctgttgtg 244 || || ||||||||||| Sbjct: 512 ccaagagccctgttgtg 496 Score = 52.0 bits (26), Expect = 8e-04 Identities = 35/38 (92%) Strand = Plus / Minus Query: 9 ctcgctttgatgattgcagcgccacgctgctggacagt 46 |||||||| ||||||||||| |||||||| |||||||| Sbjct: 631 ctcgctttaatgattgcagcaccacgctgttggacagt 594
>emb|AJ843126.1| Plantago major mRNA for malate dehydrogenase (mdh1 gene) Length = 1353 Score = 79.8 bits (40), Expect = 4e-12 Identities = 121/148 (81%) Strand = Plus / Minus Query: 5 cttcctcgctttgatgattgcagcgccacgctgctggacagtggcaatgaactccccatt 64 |||||| || ||||| || ||||| ||||||||||||||||| | ||||||||| ||| Sbjct: 783 cttcctagccttgataatggcagcaccacgctgctggacagttgaaatgaactcggtatt 724 Query: 65 cagccattcatcatcttgaacaagttcacgaacaggcttctctccactggcagtcttcac 124 || ||||| ||||| |||||| ||||||||||| || |||||| || ||| || || Sbjct: 723 caaccattggtcatcagcaacaagctcacgaacaggtttatctccagcgggagtttttac 664 Query: 125 agtggcatggttaacatcaggatactga 152 || |||||||| ||||||||||||||| Sbjct: 663 ggtagcatggttcacatcaggatactga 636
>gb|AY496910.1| Glycine max cytosolic malate dehydrogenase mRNA, complete cds Length = 1312 Score = 75.8 bits (38), Expect = 6e-11 Identities = 101/122 (82%) Strand = Plus / Minus Query: 123 acagtggcatggttaacatcaggatactgactggaagagtgattaccccagataatagca 182 ||||| ||||| ||||||||||||||||| | || |||||||| ||||||||||| || Sbjct: 654 acagttgcatgattaacatcaggatactgggttgatgagtgattgccccagataatgaca 595 Query: 183 ttcttcacgtcagaaacttggacattaagtctctcagagatctgaccgagtgccctgttg 242 ||||| || |||||||| || || | ||||| |||||||| || || | |||||||||| Sbjct: 594 ttctttacatcagaaacctgaacggtcagtctttcagagatttggcccaatgccctgttg 535 Query: 243 tg 244 || Sbjct: 534 tg 533 Score = 58.0 bits (29), Expect = 1e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 3 agcttcctcgctttgatgattgcagcgccacgctgctggacagtggcaatgaactcccca 62 ||||| || |||||||| |||||||||||||| || || ||||| | |||||| |||||| Sbjct: 774 agctttctagctttgataattgcagcgccacgttgttgaacagtagtaatgaattcccca 715 Query: 63 ttcagccattcatcatc 79 |||| ||| ||||||| Sbjct: 714 ttcaaccaggcatcatc 698
>gb|AC182655.2| Populus trichocarpa clone Pop1-121O5, complete sequence Length = 87839 Score = 71.9 bits (36), Expect = 9e-10 Identities = 108/132 (81%) Strand = Plus / Plus Query: 116 agtcttcacagtggcatggttaacatcaggatactgactggaagagtgattaccccagat 175 |||||| ||||| |||||||| |||||||| |||||| | || |||||||| ||||| || Sbjct: 7449 agtcttaacagtagcatggttgacatcagggtactgagtagatgagtgattcccccaaat 7508 Query: 176 aatagcattcttcacgtcagaaacttggacattaagtctctcagagatctgaccgagtgc 235 ||| |||| || || || || ||||||||||| | ||||| || || ||||| ||||| Sbjct: 7509 aatcacatttttaacatcggagacttggacattcaacctctctgaaatttgaccaagtgc 7568 Query: 236 cctgttgtggtc 247 |||||| ||||| Sbjct: 7569 cctgttatggtc 7580
>ref|NM_001006693.1| Xenopus tropicalis malate dehydrogenase 1, NAD (soluble) (mdh1), mRNA Length = 1305 Score = 71.9 bits (36), Expect = 9e-10 Identities = 60/68 (88%) Strand = Plus / Minus Query: 120 ttcacagtggcatggttaacatcaggatactgactggaagagtgattaccccagataata 179 |||||||| |||||| | |||||||||||||| |||| |||||||||||||||||||| Sbjct: 676 ttcacagttgcatgggaagcatcaggatactgagtggatgagtgattaccccagataatt 617 Query: 180 gcattctt 187 ||||||| Sbjct: 616 acattctt 609
>gb|BC075396.1| Xenopus tropicalis malate dehydrogenase 1, NAD (soluble), mRNA (cDNA clone MGC:89131 IMAGE:7007067), complete cds Length = 1305 Score = 71.9 bits (36), Expect = 9e-10 Identities = 60/68 (88%) Strand = Plus / Minus Query: 120 ttcacagtggcatggttaacatcaggatactgactggaagagtgattaccccagataata 179 |||||||| |||||| | |||||||||||||| |||| |||||||||||||||||||| Sbjct: 676 ttcacagttgcatgggaagcatcaggatactgagtggatgagtgattaccccagataatt 617 Query: 180 gcattctt 187 ||||||| Sbjct: 616 acattctt 609
>emb|CR761081.2| Xenopus tropicalis finished cDNA, clone TEgg049g04 Length = 1293 Score = 71.9 bits (36), Expect = 9e-10 Identities = 60/68 (88%) Strand = Plus / Minus Query: 120 ttcacagtggcatggttaacatcaggatactgactggaagagtgattaccccagataata 179 |||||||| |||||| | |||||||||||||| |||| |||||||||||||||||||| Sbjct: 674 ttcacagttgcatgggaagcatcaggatactgagtggatgagtgattaccccagataatt 615 Query: 180 gcattctt 187 ||||||| Sbjct: 614 acattctt 607
>gb|AC122161.26| Medicago truncatula clone mth2-11l3, complete sequence Length = 118625 Score = 69.9 bits (35), Expect = 4e-09 Identities = 106/127 (83%), Gaps = 2/127 (1%) Strand = Plus / Minus Query: 83 aacaagttcacgaacaggcttctctcca-ctggcagtcttcacagtggcatggttaacat 141 ||||||||| || ||||||||||| ||| |||| || || ||||| |||||||| |||| Sbjct: 79786 aacaagttcgcggacaggcttctccccagctggg-gtgttaacagttgcatggttgacat 79728 Query: 142 caggatactgactggaagagtgattaccccagataatagcattcttcacgtcagaaactt 201 |||||||||| | || || |||||||||||||| || ||||||| || |||||||||| Sbjct: 79727 caggatactgggttgatgaatgattaccccagattatgacattctttacatcagaaactt 79668 Query: 202 ggacatt 208 | ||||| Sbjct: 79667 gaacatt 79661
>gb|AC149493.7| Medicago truncatula clone mth2-116k17, complete sequence Length = 105229 Score = 69.9 bits (35), Expect = 4e-09 Identities = 106/127 (83%), Gaps = 2/127 (1%) Strand = Plus / Minus Query: 83 aacaagttcacgaacaggcttctctcca-ctggcagtcttcacagtggcatggttaacat 141 ||||||||| || ||||||||||| ||| |||| || || ||||| |||||||| |||| Sbjct: 36003 aacaagttcgcggacaggcttctccccagctggg-gtgttaacagttgcatggttgacat 35945 Query: 142 caggatactgactggaagagtgattaccccagataatagcattcttcacgtcagaaactt 201 |||||||||| | || || |||||||||||||| || ||||||| || |||||||||| Sbjct: 35944 caggatactgggttgatgaatgattaccccagattatgacattctttacatcagaaactt 35885 Query: 202 ggacatt 208 | ||||| Sbjct: 35884 gaacatt 35878
>gb|AC122171.21| Medicago truncatula clone mth2-23b18, complete sequence Length = 125865 Score = 69.9 bits (35), Expect = 4e-09 Identities = 106/127 (83%), Gaps = 2/127 (1%) Strand = Plus / Plus Query: 83 aacaagttcacgaacaggcttctctcca-ctggcagtcttcacagtggcatggttaacat 141 ||||||||| || ||||||||||| ||| |||| || || ||||| |||||||| |||| Sbjct: 38840 aacaagttcgcggacaggcttctccccagctggg-gtgttaacagttgcatggttgacat 38898 Query: 142 caggatactgactggaagagtgattaccccagataatagcattcttcacgtcagaaactt 201 |||||||||| | || || |||||||||||||| || ||||||| || |||||||||| Sbjct: 38899 caggatactgggttgatgaatgattaccccagattatgacattctttacatcagaaactt 38958 Query: 202 ggacatt 208 | ||||| Sbjct: 38959 gaacatt 38965
>emb|AJ251083.1|BVU251083 Beta vulgaris mRNA for putative malate dehydrogenase (nr1 gene) Length = 999 Score = 69.9 bits (35), Expect = 4e-09 Identities = 193/243 (79%), Gaps = 2/243 (0%) Strand = Plus / Minus Query: 3 agcttcctcgctttgatgattgcagcgccacgctgctggacagtggcaatgaactcccca 62 |||||||| ||||||||||| ||||| ||||| || || ||||| | |||||||| ||| Sbjct: 722 agcttccttgctttgatgatggcagcaccacgttgttgcacagttgttatgaactctcca 663 Query: 63 ttcagccattcatcatcttgaacaagttcacgaacaggcttctctccactggcagtcttc 122 || | |||| ||||||| ||||| || || |||| |||||| ||||| | || ||| Sbjct: 662 tttaaccatgcatcatcagcgacaagctctcggacagccttctcaccactccctgttttc 603 Query: 123 acagtggcatgg-ttaacatcaggatactgactggaagagtgattaccccagataatagc 181 || ||| ||||| || |||||||| ||||| || ||||| || |||||||| || | Sbjct: 602 acggtg-catgggttcacatcagggtactgggatgaggagtggtttccccagatgatgac 544 Query: 182 attcttcacgtcagaaacttggacattaagtctctcagagatctgaccgagtgccctgtt 241 |||||| || ||||| ||||| |||| |||||||| ||||| |||||||| |||||||| Sbjct: 543 attcttaacatcagatacttgagcattcagtctctctgagatttgaccgagagccctgtt 484 Query: 242 gtg 244 ||| Sbjct: 483 gtg 481
>gb|DQ215423.1| Taeniopygia guttata clone 0062P0002E12 malate dehydrogenase cytoplasmic variant 2-like mRNA, complete sequence Length = 1283 Score = 60.0 bits (30), Expect = 3e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 129 gcatggttaacatcaggatactgactggaagagtgattaccccagataatagcattcttc 188 |||||||||||||||||||| ||| |||| ||||| || |||||||| || |||||||| Sbjct: 651 gcatggttaacatcaggatattgagtggaggagtggttgccccagatgatgacattcttc 592 Query: 189 ac 190 || Sbjct: 591 ac 590
>gb|DQ215422.1| Taeniopygia guttata clone 0058P0005E10 malate dehydrogenase cytoplasmic variant 2-like mRNA, complete sequence Length = 1268 Score = 60.0 bits (30), Expect = 3e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 129 gcatggttaacatcaggatactgactggaagagtgattaccccagataatagcattcttc 188 |||||||||||||||||||| ||| |||| ||||| || |||||||| || |||||||| Sbjct: 649 gcatggttaacatcaggatattgagtggaggagtggttgccccagatgatgacattcttc 590 Query: 189 ac 190 || Sbjct: 589 ac 588
>gb|DQ215421.1| Taeniopygia guttata clone 0061P0023E03 malate dehydrogenase cytoplasmic variant 1-like mRNA, complete sequence Length = 1552 Score = 60.0 bits (30), Expect = 3e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 129 gcatggttaacatcaggatactgactggaagagtgattaccccagataatagcattcttc 188 |||||||||||||||||||| ||| |||| ||||| || |||||||| || |||||||| Sbjct: 645 gcatggttaacatcaggatattgagtggaggagtggttgccccagatgatgacattcttc 586 Query: 189 ac 190 || Sbjct: 585 ac 584
>emb|AJ299256.1|NTA299256 Nicotiana tabacum mRNA for malate dehydrogenase (md1 gene) Length = 1328 Score = 56.0 bits (28), Expect = 5e-05 Identities = 64/76 (84%) Strand = Plus / Minus Query: 35 ctgctggacagtggcaatgaactccccattcagccattcatcatcttgaacaagttcacg 94 |||||| ||||| | ||||||||| ||||||| |||| ||||||| ||||||||||| Sbjct: 745 ctgctgtacagtagaaatgaactcaccattcaaccatgcatcatcagccacaagttcacg 686 Query: 95 aacaggcttctctcca 110 || |||||||||||| Sbjct: 685 gactggcttctctcca 670
>gb|AF459646.1| Lupinus albus malate dehydrogenase (MDH2) mRNA, complete cds Length = 1277 Score = 54.0 bits (27), Expect = 2e-04 Identities = 146/183 (79%), Gaps = 2/183 (1%) Strand = Plus / Minus Query: 3 agcttcctcgctttgatgattgcagcgccacgctgctggacagtggcaatgaactcccca 62 ||||| || |||||||| |||||||| ||||| || ||||||||| ||||| || | Sbjct: 773 agctttctagctttgataattgcagcaccacgttgttggacagtgcttatgaattctgaa 714 Query: 63 ttcagccattcatcatcttgaacaagttcacgaacaggcttctctcca-ctggcagtctt 121 |||| ||| ||||||| |||||||||||| |||||||| || ||| |||| ||| | Sbjct: 713 ttcaaccaggcatcatcacaaacaagttcacggacaggcttttccccagctgg-agttgt 655 Query: 122 cacagtggcatggttaacatcaggatactgactggaagagtgattaccccagataatagc 181 ||||| |||||||| ||||| ||||||||| | || || || ||||||||||| ||| | Sbjct: 654 aacagttgcatggttgacatcgggatactgagttgatgaatggttaccccagattataac 595 Query: 182 att 184 ||| Sbjct: 594 att 592
>emb|AJ719442.1| Gallus gallus mRNA for hypothetical protein, clone 2g5 Length = 1322 Score = 52.0 bits (26), Expect = 8e-04 Identities = 53/62 (85%) Strand = Plus / Minus Query: 129 gcatggttaacatcaggatactgactggaagagtgattaccccagataatagcattcttc 188 |||||||||||||| ||||||||| |||| ||||| || ||||| || || |||||||| Sbjct: 675 gcatggttaacatctggatactgagtggaggagtggttgccccaaatgatgacattcttc 616 Query: 189 ac 190 || Sbjct: 615 ac 614
>ref|NM_001006395.1| Gallus gallus malate dehydrogenase 1, NAD (soluble) (MDH1), mRNA Length = 1322 Score = 52.0 bits (26), Expect = 8e-04 Identities = 53/62 (85%) Strand = Plus / Minus Query: 129 gcatggttaacatcaggatactgactggaagagtgattaccccagataatagcattcttc 188 |||||||||||||| ||||||||| |||| ||||| || ||||| || || |||||||| Sbjct: 675 gcatggttaacatctggatactgagtggaggagtggttgccccaaatgatgacattcttc 616 Query: 189 ac 190 || Sbjct: 615 ac 614
>gb|AF379609.1|AF379609 Zea mays malate dehydrogenase mRNA, partial cds Length = 529 Score = 52.0 bits (26), Expect = 8e-04 Identities = 35/38 (92%) Strand = Plus / Minus Query: 9 ctcgctttgatgattgcagcgccacgctgctggacagt 46 |||||||| ||||||||||| |||||||| |||||||| Sbjct: 50 ctcgctttaatgattgcagcaccacgctgttggacagt 13
>gb|AY161295.1| Danio rerio cytosolic malate dehydrogenase B (mdhB) mRNA, complete cds Length = 1048 Score = 52.0 bits (26), Expect = 8e-04 Identities = 59/70 (84%) Strand = Plus / Minus Query: 1 agagcttcctcgctttgatgattgcagcgccacgctgctggacagtggcaatgaactccc 60 |||| ||||| |||||||||| |||||| ||||||||||| || || | |||||| || | Sbjct: 743 agagtttcctggctttgatgactgcagcaccacgctgctgcaccgtagaaatgaattctc 684 Query: 61 cattcagcca 70 | |||||||| Sbjct: 683 ccttcagcca 674
>ref|NM_199969.1| Danio rerio malate dehydrogenase 1b, NAD (soluble) (mdh1b), mRNA Length = 1751 Score = 52.0 bits (26), Expect = 8e-04 Identities = 59/70 (84%) Strand = Plus / Minus Query: 1 agagcttcctcgctttgatgattgcagcgccacgctgctggacagtggcaatgaactccc 60 |||| ||||| |||||||||| |||||| ||||||||||| || || | |||||| || | Sbjct: 855 agagtttcctggctttgatgactgcagcaccacgctgctgcaccgtagaaatgaattctc 796 Query: 61 cattcagcca 70 | |||||||| Sbjct: 795 ccttcagcca 786
>emb|BX932010.1| Gallus gallus finished cDNA, clone ChEST222i6 Length = 1565 Score = 52.0 bits (26), Expect = 8e-04 Identities = 53/62 (85%) Strand = Plus / Minus Query: 129 gcatggttaacatcaggatactgactggaagagtgattaccccagataatagcattcttc 188 |||||||||||||| ||||||||| |||| ||||| || ||||| || || |||||||| Sbjct: 632 gcatggttaacatctggatactgagtggaggagtggttgccccaaatgatgacattcttc 573 Query: 189 ac 190 || Sbjct: 572 ac 571
>gb|BC071512.1| Danio rerio malate dehydrogenase 1b, NAD (soluble), mRNA (cDNA clone MGC:86883 IMAGE:6904389), complete cds Length = 1604 Score = 52.0 bits (26), Expect = 8e-04 Identities = 59/70 (84%) Strand = Plus / Minus Query: 1 agagcttcctcgctttgatgattgcagcgccacgctgctggacagtggcaatgaactccc 60 |||| ||||| |||||||||| |||||| ||||||||||| || || | |||||| || | Sbjct: 756 agagtttcctggctttgatgactgcagcaccacgctgctgcaccgtagaaatgaattctc 697 Query: 61 cattcagcca 70 | |||||||| Sbjct: 696 ccttcagcca 687
>gb|BC050508.1| Danio rerio malate dehydrogenase 1b, NAD (soluble), mRNA (cDNA clone MGC:56234 IMAGE:5601379), complete cds Length = 1751 Score = 52.0 bits (26), Expect = 8e-04 Identities = 59/70 (84%) Strand = Plus / Minus Query: 1 agagcttcctcgctttgatgattgcagcgccacgctgctggacagtggcaatgaactccc 60 |||| ||||| |||||||||| |||||| ||||||||||| || || | |||||| || | Sbjct: 855 agagtttcctggctttgatgactgcagcaccacgctgctgcaccgtagaaatgaattctc 796 Query: 61 cattcagcca 70 | |||||||| Sbjct: 795 ccttcagcca 786
>gb|DQ225182.1| Lycopersicon chilense malate dehydrogenase mRNA, complete cds Length = 1005 Score = 50.1 bits (25), Expect = 0.003 Identities = 82/101 (81%) Strand = Plus / Minus Query: 3 agcttcctcgctttgatgattgcagcgccacgctgctggacagtggcaatgaactcccca 62 ||||| || |||||||| || ||||| || | |||||| ||||| | ||||||||| || Sbjct: 728 agctttctagctttgataatggcagcacccctctgctgtacagtagaaatgaactcaccg 669 Query: 63 ttcagccattcatcatcttgaacaagttcacgaacaggctt 103 |||| |||| ||||||| |||||||||||| || ||||| Sbjct: 668 ttcaaccatgcatcatcagcaacaagttcacggactggctt 628
>gb|BC060386.1| Xenopus laevis hypothetical protein MGC68659, mRNA (cDNA clone MGC:68659 IMAGE:4032761), complete cds Length = 1320 Score = 48.1 bits (24), Expect = 0.013 Identities = 36/40 (90%) Strand = Plus / Minus Query: 139 catcaggatactgactggaagagtgattaccccagataat 178 |||||||||||||| | || |||||||||||||| ||||| Sbjct: 685 catcaggatactgagttgatgagtgattaccccatataat 646
>gb|AY485993.1| Pinus pinaster malate dehydrogenase (mdh) mRNA, complete cds Length = 1413 Score = 48.1 bits (24), Expect = 0.013 Identities = 51/60 (85%) Strand = Plus / Minus Query: 128 ggcatggttaacatcaggatactgactggaagagtgattaccccagataatagcattctt 187 |||||||| ||| || |||||||| || ||||||||||| ||||| || ||| ||||||| Sbjct: 613 ggcatggtaaacgtctggatactggcttgaagagtgatttccccaaattataacattctt 554
>emb|CR352220.19| Zebrafish DNA sequence from clone DKEY-148F10 in linkage group 17, complete sequence Length = 174580 Score = 48.1 bits (24), Expect = 0.013 Identities = 36/40 (90%) Strand = Plus / Minus Query: 1 agagcttcctcgctttgatgattgcagcgccacgctgctg 40 |||| ||||| |||||||||| |||||| ||||||||||| Sbjct: 1350 agagtttcctggctttgatgactgcagcaccacgctgctg 1311
>gb|L41699.1|PS300585E Eucalyptus globulus bicostata symbiont (F00064) mRNA, ESTun585 Length = 194 Score = 48.1 bits (24), Expect = 0.013 Identities = 30/32 (93%) Strand = Plus / Minus Query: 123 acagtggcatggttaacatcaggatactgact 154 ||||| |||||||| ||||||||||||||||| Sbjct: 32 acagttgcatggttcacatcaggatactgact 1
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome Length = 3059876 Score = 46.1 bits (23), Expect = 0.052 Identities = 23/23 (100%) Strand = Plus / Plus Query: 12 gctttgatgattgcagcgccacg 34 ||||||||||||||||||||||| Sbjct: 2511228 gctttgatgattgcagcgccacg 2511250
>gb|DQ096990.1| Xenopus laevis brso01 mRNA, complete sequence Length = 669 Score = 46.1 bits (23), Expect = 0.052 Identities = 35/39 (89%) Strand = Plus / Minus Query: 139 catcaggatactgactggaagagtgattaccccagataa 177 |||||||||||||| | || |||||||||||||| |||| Sbjct: 44 catcaggatactgagttgatgagtgattaccccatataa 6
>emb|CT033066.1| Platynereis dumerilii EST IB0AAA27BE02EM1 Length = 933 Score = 46.1 bits (23), Expect = 0.052 Identities = 41/47 (87%) Strand = Plus / Minus Query: 129 gcatggttaacatcaggatactgactggaagagtgattaccccagat 175 |||||||||||||| || |||||| | |||||||| || |||||||| Sbjct: 690 gcatggttaacatcggggtactgagtagaagagtggttgccccagat 644
>ref|NM_100321.2| Arabidopsis thaliana malate dehydrogenase/ oxidoreductase AT1G04410 mRNA, complete cds Length = 1484 Score = 44.1 bits (22), Expect = 0.20 Identities = 28/30 (93%) Strand = Plus / Minus Query: 5 cttcctcgctttgatgattgcagcgccacg 34 ||||||||| |||||||||||||| ||||| Sbjct: 865 cttcctcgccttgatgattgcagctccacg 836
>gb|AY133655.1| Arabidopsis thaliana At1g04410/F19P19_13 mRNA, complete cds Length = 999 Score = 44.1 bits (22), Expect = 0.20 Identities = 28/30 (93%) Strand = Plus / Minus Query: 5 cttcctcgctttgatgattgcagcgccacg 34 ||||||||| |||||||||||||| ||||| Sbjct: 720 cttcctcgccttgatgattgcagctccacg 691
>gb|AY081563.1| Arabidopsis thaliana unknown protein (At1g04410) mRNA, complete cds Length = 1223 Score = 44.1 bits (22), Expect = 0.20 Identities = 28/30 (93%) Strand = Plus / Minus Query: 5 cttcctcgctttgatgattgcagcgccacg 34 ||||||||| |||||||||||||| ||||| Sbjct: 720 cttcctcgccttgatgattgcagctccacg 691
>gb|AY057442.1| Arabidopsis thaliana ecotype Ler cryptochrome 2 (CRY2) gene, complete cds Length = 4649 Score = 44.1 bits (22), Expect = 0.20 Identities = 28/30 (93%) Strand = Plus / Minus Query: 5 cttcctcgctttgatgattgcagcgccacg 34 ||||||||| |||||||||||||| ||||| Sbjct: 288 cttcctcgccttgatgattgcagctccacg 259
>gb|AY057441.1| Arabidopsis thaliana ecotype Cvi cryptochrome 2 (CRY2) gene, complete cds Length = 4659 Score = 44.1 bits (22), Expect = 0.20 Identities = 28/30 (93%) Strand = Plus / Minus Query: 5 cttcctcgctttgatgattgcagcgccacg 34 ||||||||| |||||||||||||| ||||| Sbjct: 295 cttcctcgccttgatgattgcagctccacg 266
>gb|AY065134.1| Arabidopsis thaliana unknown protein (At1g04410; F19P19.13) mRNA, complete cds Length = 1314 Score = 44.1 bits (22), Expect = 0.20 Identities = 28/30 (93%) Strand = Plus / Minus Query: 5 cttcctcgctttgatgattgcagcgccacg 34 ||||||||| |||||||||||||| ||||| Sbjct: 806 cttcctcgccttgatgattgcagctccacg 777
>gb|AY050374.1| Arabidopsis thaliana At1g04410/F19P19_13 mRNA, complete cds Length = 1309 Score = 44.1 bits (22), Expect = 0.20 Identities = 28/30 (93%) Strand = Plus / Minus Query: 5 cttcctcgctttgatgattgcagcgccacg 34 ||||||||| |||||||||||||| ||||| Sbjct: 802 cttcctcgccttgatgattgcagctccacg 773
>emb|BX815185.1|CNS0ACZH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS3ZH07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 541 Score = 44.1 bits (22), Expect = 0.20 Identities = 28/30 (93%) Strand = Plus / Minus Query: 5 cttcctcgctttgatgattgcagcgccacg 34 ||||||||| |||||||||||||| ||||| Sbjct: 30 cttcctcgccttgatgattgcagctccacg 1
>emb|BX815710.1|CNS0ACSG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS87ZA02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 600 Score = 44.1 bits (22), Expect = 0.20 Identities = 28/30 (93%) Strand = Plus / Minus Query: 5 cttcctcgctttgatgattgcagcgccacg 34 ||||||||| |||||||||||||| ||||| Sbjct: 95 cttcctcgccttgatgattgcagctccacg 66
>gb|AY088023.1| Arabidopsis thaliana clone 40467 mRNA, complete sequence Length = 1351 Score = 44.1 bits (22), Expect = 0.20 Identities = 28/30 (93%) Strand = Plus / Minus Query: 5 cttcctcgctttgatgattgcagcgccacg 34 ||||||||| |||||||||||||| ||||| Sbjct: 842 cttcctcgccttgatgattgcagctccacg 813
>gb|AC000104.1|F19P19 Sequence of BAC F19P19 from Arabidopsis thaliana chromosome 1, complete sequence Length = 107527 Score = 44.1 bits (22), Expect = 0.20 Identities = 28/30 (93%) Strand = Plus / Minus Query: 5 cttcctcgctttgatgattgcagcgccacg 34 ||||||||| |||||||||||||| ||||| Sbjct: 43327 cttcctcgccttgatgattgcagctccacg 43298
>ref|XM_515508.1| PREDICTED: Pan troglodytes LOC459271 (LOC459271), mRNA Length = 1059 Score = 42.1 bits (21), Expect = 0.81 Identities = 51/61 (83%) Strand = Plus / Minus Query: 127 tggcatggttaacatcaggatactgactggaagagtgattaccccagataatagcattct 186 |||||||||| ||||| ||||||||| | || || || || ||||||||||| |||||| Sbjct: 649 tggcatggttgacatctggatactgagtcgaggaatggtttccccagataatgacattct 590 Query: 187 t 187 | Sbjct: 589 t 589
>ref|NM_005917.2| Homo sapiens malate dehydrogenase 1, NAD (soluble) (MDH1), mRNA Length = 1268 Score = 42.1 bits (21), Expect = 0.81 Identities = 51/61 (83%) Strand = Plus / Minus Query: 127 tggcatggttaacatcaggatactgactggaagagtgattaccccagataatagcattct 186 |||||||||| ||||| ||||||||| | || || || || ||||||||||| |||||| Sbjct: 651 tggcatggttgacatctggatactgagtcgaggaatggtttccccagataatgacattct 592 Query: 187 t 187 | Sbjct: 591 t 591 Score = 40.1 bits (20), Expect = 3.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 15 ttgatgattgcagcgccacgctgctggacagt 46 ||||||| ||||||||||||||||| ||||| Sbjct: 763 ttgatgacagcagcgccacgctgctgcacagt 732
>gb|BC001484.2| Homo sapiens malate dehydrogenase 1, NAD (soluble), mRNA (cDNA clone MGC:1375 IMAGE:3505345), complete cds Length = 1286 Score = 42.1 bits (21), Expect = 0.81 Identities = 51/61 (83%) Strand = Plus / Minus Query: 127 tggcatggttaacatcaggatactgactggaagagtgattaccccagataatagcattct 186 |||||||||| ||||| ||||||||| | || || || || ||||||||||| |||||| Sbjct: 651 tggcatggttgacatctggatactgagtcgaggaatggtttccccagataatgacattct 592 Query: 187 t 187 | Sbjct: 591 t 591 Score = 40.1 bits (20), Expect = 3.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 15 ttgatgattgcagcgccacgctgctggacagt 46 ||||||| ||||||||||||||||| ||||| Sbjct: 763 ttgatgacagcagcgccacgctgctgcacagt 732
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 cagcgccacgctgctggacag 45 ||||||||||||||||||||| Sbjct: 3060467 cagcgccacgctgctggacag 3060447
>emb|AJ250843.1|MSQ250843 Mantoniella squamata mRNA for cytosolic malate dehydrogenase (nad-MDH gene) Length = 1077 Score = 42.1 bits (21), Expect = 0.81 Identities = 39/45 (86%) Strand = Plus / Minus Query: 17 gatgattgcagcgccacgctgctggacagtggcaatgaactcccc 61 |||||| || ||||| |||||||| || ||||| ||||||||||| Sbjct: 702 gatgatggcggcgccgcgctgctgcacggtggcgatgaactcccc 658
>emb|CR622929.1| full-length cDNA clone CS0DC020YF01 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1225 Score = 42.1 bits (21), Expect = 0.81 Identities = 51/61 (83%) Strand = Plus / Minus Query: 127 tggcatggttaacatcaggatactgactggaagagtgattaccccagataatagcattct 186 |||||||||| ||||| ||||||||| | || || || || ||||||||||| |||||| Sbjct: 669 tggcatggttgacatctggatactgagtcgaggaatggtttccccagataatgacattct 610 Query: 187 t 187 | Sbjct: 609 t 609 Score = 40.1 bits (20), Expect = 3.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 15 ttgatgattgcagcgccacgctgctggacagt 46 ||||||| ||||||||||||||||| ||||| Sbjct: 781 ttgatgacagcagcgccacgctgctgcacagt 750
>emb|CR619426.1| full-length cDNA clone CS0DI002YM05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 717 Score = 42.1 bits (21), Expect = 0.81 Identities = 51/61 (83%) Strand = Plus / Minus Query: 127 tggcatggttaacatcaggatactgactggaagagtgattaccccagataatagcattct 186 |||||||||| ||||| ||||||||| | || || || || ||||||||||| |||||| Sbjct: 97 tggcatggttgacatctggatactgagtcgaggaatggtttccccagataatgacattct 38 Query: 187 t 187 | Sbjct: 37 t 37 Score = 40.1 bits (20), Expect = 3.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 15 ttgatgattgcagcgccacgctgctggacagt 46 ||||||| ||||||||||||||||| ||||| Sbjct: 209 ttgatgacagcagcgccacgctgctgcacagt 178
>emb|CR609240.1| full-length cDNA clone CS0DC013YO22 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1257 Score = 42.1 bits (21), Expect = 0.81 Identities = 51/61 (83%) Strand = Plus / Minus Query: 127 tggcatggttaacatcaggatactgactggaagagtgattaccccagataatagcattct 186 |||||||||| ||||| ||||||||| | || || || || ||||||||||| |||||| Sbjct: 662 tggcatggttgacatctggatactgagtcgaggaatggtttccccagataatgacattct 603 Query: 187 t 187 | Sbjct: 602 t 602 Score = 40.1 bits (20), Expect = 3.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 15 ttgatgattgcagcgccacgctgctggacagt 46 ||||||| ||||||||||||||||| ||||| Sbjct: 774 ttgatgacagcagcgccacgctgctgcacagt 743
>emb|CR606360.1| full-length cDNA clone CS0DJ015YM22 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1256 Score = 42.1 bits (21), Expect = 0.81 Identities = 51/61 (83%) Strand = Plus / Minus Query: 127 tggcatggttaacatcaggatactgactggaagagtgattaccccagataatagcattct 186 |||||||||| ||||| ||||||||| | || || || || ||||||||||| |||||| Sbjct: 669 tggcatggttgacatctggatactgagtcgaggaatggtttccccagataatgacattct 610 Query: 187 t 187 | Sbjct: 609 t 609 Score = 40.1 bits (20), Expect = 3.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 15 ttgatgattgcagcgccacgctgctggacagt 46 ||||||| ||||||||||||||||| ||||| Sbjct: 781 ttgatgacagcagcgccacgctgctgcacagt 750
>gb|AC104018.3| Homo sapiens chromosome 8, clone RP11-354A14, complete sequence Length = 186256 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Plus Query: 101 cttctctccactggcagtctt 121 ||||||||||||||||||||| Sbjct: 141841 cttctctccactggcagtctt 141861
>emb|CR603513.1| full-length cDNA clone CS0DC017YG07 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1233 Score = 42.1 bits (21), Expect = 0.81 Identities = 51/61 (83%) Strand = Plus / Minus Query: 127 tggcatggttaacatcaggatactgactggaagagtgattaccccagataatagcattct 186 |||||||||| ||||| ||||||||| | || || || || ||||||||||| |||||| Sbjct: 644 tggcatggttgacatctggatactgagtcgaggaatggtttccccagataatgacattct 585 Query: 187 t 187 | Sbjct: 584 t 584 Score = 40.1 bits (20), Expect = 3.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 15 ttgatgattgcagcgccacgctgctggacagt 46 ||||||| ||||||||||||||||| ||||| Sbjct: 756 ttgatgacagcagcgccacgctgctgcacagt 725
>emb|CR598586.1| full-length cDNA clone CS0DJ013YB20 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1258 Score = 42.1 bits (21), Expect = 0.81 Identities = 51/61 (83%) Strand = Plus / Minus Query: 127 tggcatggttaacatcaggatactgactggaagagtgattaccccagataatagcattct 186 |||||||||| ||||| ||||||||| | || || || || ||||||||||| |||||| Sbjct: 669 tggcatggttgacatctggatactgagtcgaggaatggtttccccagataatgacattct 610 Query: 187 t 187 | Sbjct: 609 t 609 Score = 40.1 bits (20), Expect = 3.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 15 ttgatgattgcagcgccacgctgctggacagt 46 ||||||| ||||||||||||||||| ||||| Sbjct: 781 ttgatgacagcagcgccacgctgctgcacagt 750
>emb|CR594032.1| full-length cDNA clone CS0DB003YN14 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1231 Score = 42.1 bits (21), Expect = 0.81 Identities = 51/61 (83%) Strand = Plus / Minus Query: 127 tggcatggttaacatcaggatactgactggaagagtgattaccccagataatagcattct 186 |||||||||| ||||| ||||||||| | || || || || ||||||||||| |||||| Sbjct: 644 tggcatggttgacatctggatactgagtcgaggaatggtttccccagataatgacattct 585 Query: 187 t 187 | Sbjct: 584 t 584 Score = 40.1 bits (20), Expect = 3.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 15 ttgatgattgcagcgccacgctgctggacagt 46 ||||||| ||||||||||||||||| ||||| Sbjct: 756 ttgatgacagcagcgccacgctgctgcacagt 725
>emb|CR457405.1| Homo sapiens full open reading frame cDNA clone RZPDo834A0714D for gene MDH1, malate dehydrogenase 1, NAD (soluble); complete cds, incl. stopcodon Length = 1005 Score = 42.1 bits (21), Expect = 0.81 Identities = 51/61 (83%) Strand = Plus / Minus Query: 127 tggcatggttaacatcaggatactgactggaagagtgattaccccagataatagcattct 186 |||||||||| ||||| ||||||||| | || || || || ||||||||||| |||||| Sbjct: 595 tggcatggttgacatctggatactgagtcgaggaatggtttccccagataatgacattct 536 Query: 187 t 187 | Sbjct: 535 t 535 Score = 40.1 bits (20), Expect = 3.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 15 ttgatgattgcagcgccacgctgctggacagt 46 ||||||| ||||||||||||||||| ||||| Sbjct: 707 ttgatgacagcagcgccacgctgctgcacagt 676
>dbj|D55654.1|HUMCMD Homo sapiens mRNA for cytosolic malate dehydrogenase, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 0.81 Identities = 51/61 (83%) Strand = Plus / Minus Query: 127 tggcatggttaacatcaggatactgactggaagagtgattaccccagataatagcattct 186 |||||||||| ||||| ||||||||| | || || || || ||||||||||| |||||| Sbjct: 650 tggcatggttgacatctggatactgagtcgaggaatggtttccccagataatgacattct 591 Query: 187 t 187 | Sbjct: 590 t 590 Score = 40.1 bits (20), Expect = 3.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 15 ttgatgattgcagcgccacgctgctggacagt 46 ||||||| ||||||||||||||||| ||||| Sbjct: 762 ttgatgacagcagcgccacgctgctgcacagt 731
>gb|AC016734.7| Homo sapiens BAC clone RP11-391A7 from 2, complete sequence Length = 218836 Score = 42.1 bits (21), Expect = 0.81 Identities = 51/61 (83%) Strand = Plus / Minus Query: 127 tggcatggttaacatcaggatactgactggaagagtgattaccccagataatagcattct 186 |||||||||| ||||| ||||||||| | || || || || ||||||||||| |||||| Sbjct: 141716 tggcatggttgacatctggatactgagtcgaggaatggtttccccagataatgacattct 141657 Query: 187 t 187 | Sbjct: 141656 t 141656 Score = 40.1 bits (20), Expect = 3.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 15 ttgatgattgcagcgccacgctgctggacagt 46 ||||||| ||||||||||||||||| ||||| Sbjct: 142235 ttgatgacagcagcgccacgctgctgcacagt 142204
>gb|U20352.1|HSU20352 Homo sapiens malate dehydrogenase (MDHA) mRNA, complete cds Length = 1213 Score = 42.1 bits (21), Expect = 0.81 Identities = 51/61 (83%) Strand = Plus / Minus Query: 127 tggcatggttaacatcaggatactgactggaagagtgattaccccagataatagcattct 186 |||||||||| ||||| ||||||||| | || || || || ||||||||||| |||||| Sbjct: 595 tggcatggttgacatctggatactgagtcgaggaatggtttccccagataatgacattct 536 Query: 187 t 187 | Sbjct: 535 t 535 Score = 40.1 bits (20), Expect = 3.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 15 ttgatgattgcagcgccacgctgctggacagt 46 ||||||| ||||||||||||||||| ||||| Sbjct: 707 ttgatgacagcagcgccacgctgctgcacagt 676
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 3.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 104 ctctccactggcagtcttcacagt 127 |||||||||| ||||||||||||| Sbjct: 4117255 ctctccactgtcagtcttcacagt 4117278
>emb|CR381560.8| Zebrafish DNA sequence from clone CH211-172L8 in linkage group 25, complete sequence Length = 145001 Score = 40.1 bits (20), Expect = 3.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 111 ctggcagtcttcacagtggcatgg 134 ||||||||||||||||||| |||| Sbjct: 132967 ctggcagtcttcacagtggaatgg 132990
>emb|CR675000.2|CNS0FJSU Tetraodon nigroviridis full-length cDNA Length = 1072 Score = 40.1 bits (20), Expect = 3.2 Identities = 47/56 (83%) Strand = Plus / Minus Query: 3 agcttcctcgctttgatgattgcagcgccacgctgctggacagtggcaatgaactc 58 ||||||||||| ||||||| || || || | |||||||||||||| |||||||| Sbjct: 522 agcttcctcgccttgatgaccgctgcacctctctgctggacagtggtgatgaactc 467
>emb|AM040268.1| Capsicum chinense partial mRNA for cytosolic malate dehydrogenase (mdh gene) Length = 773 Score = 40.1 bits (20), Expect = 3.2 Identities = 62/76 (81%) Strand = Plus / Minus Query: 35 ctgctggacagtggcaatgaactccccattcagccattcatcatcttgaacaagttcacg 94 |||||| ||||| | ||||||||| || |||| |||| ||||||| ||||||||||| Sbjct: 243 ctgctgtacagtagtaatgaactcaccgttcaaccatgcatcatcagccacaagttcacg 184 Query: 95 aacaggcttctctcca 110 || ||||| |||||| Sbjct: 183 gactggcttttctcca 168
>emb|AL590621.10| Human DNA sequence from clone RP11-435B17 on chromosome 6, complete sequence Length = 117411 Score = 40.1 bits (20), Expect = 3.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 acgtcagaaacttggacattaagt 212 |||||||||||||| ||||||||| Sbjct: 28390 acgtcagaaacttgaacattaagt 28413
>emb|AL023592.1|SPCC550 S.pombe chromosome III cosmid c550 Length = 38475 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 tcttgaacaagttcacgaac 97 |||||||||||||||||||| Sbjct: 8815 tcttgaacaagttcacgaac 8796
>emb|AL645587.9| Mouse DNA sequence from clone RP23-171O15 on chromosome 13 Contains part of a novel gene, complete sequence Length = 150986 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 atactgactggaagagtgat 165 |||||||||||||||||||| Sbjct: 54535 atactgactggaagagtgat 54516
>gb|AC104663.3| Homo sapiens BAC clone RP11-713M6 from 4, complete sequence Length = 137625 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 ctccccattcagccattcat 75 |||||||||||||||||||| Sbjct: 55014 ctccccattcagccattcat 54995
>ref|NM_001023088.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCC550.05), partial mRNA Length = 612 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 tcttgaacaagttcacgaac 97 |||||||||||||||||||| Sbjct: 113 tcttgaacaagttcacgaac 94
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 3.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 104 ctctccactggcagtcttcacagt 127 |||||||||| ||||||||||||| Sbjct: 4117364 ctctccactgtcagtcttcacagt 4117387
>gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0050H14, complete sequence Length = 142245 Score = 40.1 bits (20), Expect = 3.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 104 ctctccactggcagtcttcacagt 127 |||||||||| ||||||||||||| Sbjct: 17892 ctctccactgtcagtcttcacagt 17915
>emb|AL928704.10| Mouse DNA sequence from clone RP23-393G10 on chromosome 2, complete sequence Length = 171715 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 aacaagttcacgaacaggct 102 |||||||||||||||||||| Sbjct: 152481 aacaagttcacgaacaggct 152500 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,944,073 Number of Sequences: 3902068 Number of extensions: 1944073 Number of successful extensions: 37287 Number of sequences better than 10.0: 88 Number of HSP's better than 10.0 without gapping: 86 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 37064 Number of HSP's gapped (non-prelim): 215 length of query: 247 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 225 effective length of database: 17,147,199,772 effective search space: 3858119948700 effective search space used: 3858119948700 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)