ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal33i19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DOPP1_HUMAN (Q86YN1) Dolichyldiphosphatase 1 (EC 3.6.1.43) (Doli... 55 7e-08
2DOPP1_MOUSE (Q9JMF7) Dolichyldiphosphatase 1 (EC 3.6.1.43) (Doli... 54 2e-07
3DOPP_NEUCR (Q9C2M6) Putative dolichyldiphosphatase (EC 3.6.1.43)... 32 1.1
4THIG_ANASP (Q8YRC9) Bifunctional goxB/thiG protein [Includes: Gl... 29 5.5
5S17P_CHLRE (P46284) Sedoheptulose-1,7-bisphosphatase, chloroplas... 29 7.2
6GLPK3_HUMAN (Q14409) Glycerol kinase, testis specific 1 (EC 2.7.... 28 9.4
7GLPK2_HUMAN (Q14410) Glycerol kinase, testis specific 2 (EC 2.7.... 28 9.4
8GLPK_HUMAN (P32189) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol ... 28 9.4

>DOPP1_HUMAN (Q86YN1) Dolichyldiphosphatase 1 (EC 3.6.1.43) (Dolichyl|
           pyrophosphate phosphatase 1)
          Length = 238

 Score = 55.5 bits (132), Expect = 7e-08
 Identities = 31/79 (39%), Positives = 38/79 (48%)
 Frame = -1

Query: 465 LAFLTMLSRVYLGYHTVPQXXXXXXXXXXXXAIWYWFANTILAQYFPMIEESAIGRWFYI 286
           +AFL   SRVYL YHT  Q              W+ F   +L   FP I    +  +F I
Sbjct: 146 VAFLVSYSRVYLLYHTWSQVLYGGIAGGLMAIAWFIFTQEVLTPLFPRIAAWPVSEFFLI 205

Query: 285 KDTSHIQDVLKFEYDNARA 229
           +DTS I +VL FEY   RA
Sbjct: 206 RDTSLIPNVLWFEYTVTRA 224



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>DOPP1_MOUSE (Q9JMF7) Dolichyldiphosphatase 1 (EC 3.6.1.43) (Dolichyl|
           pyrophosphate phosphatase 1) (Protein 2-23)
          Length = 238

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 32/78 (41%), Positives = 36/78 (46%)
 Frame = -1

Query: 462 AFLTMLSRVYLGYHTVPQXXXXXXXXXXXXAIWYWFANTILAQYFPMIEESAIGRWFYIK 283
           AFL   SRVYL YHT  Q              W+     IL   FP I    I  +F I+
Sbjct: 147 AFLVSYSRVYLLYHTWSQVFYGGVAGSLMAVAWFIITQEILTPLFPRIAAWPISEFFLIR 206

Query: 282 DTSHIQDVLKFEYDNARA 229
           DTS I +VL FEY   RA
Sbjct: 207 DTSLIPNVLWFEYTVTRA 224



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>DOPP_NEUCR (Q9C2M6) Putative dolichyldiphosphatase (EC 3.6.1.43) (Dolichyl|
           pyrophosphate phosphatase)
          Length = 282

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
 Frame = -1

Query: 465 LAFLTMLSRVYLGYHTVPQXXXXXXXXXXXXAIWYWFANTI-LAQYFPMIEESAIGRWFY 289
           LA     SR YLGYHT  Q              W+   + +  +     I +  + RWF 
Sbjct: 188 LAGAVAWSRTYLGYHTEKQVLVGCGAGTLCAVAWFVVTHVVRQSGLLGQILDFPVVRWFR 247

Query: 288 IKDTSHIQDVLKF---EYDNARAARKKV 214
           ++D    +D+ +    +++  R AR++V
Sbjct: 248 VRDLVVEEDLPQAGWEKWEEQRVARREV 275



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>THIG_ANASP (Q8YRC9) Bifunctional goxB/thiG protein [Includes: Glycine oxidase|
           (EC 1.5.3.-); Thiazole biosynthesis protein thiG]
          Length = 652

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -1

Query: 363 YWFANTILAQYFPMIEESAIGRWFYIKD 280
           YW     + QY P + E  +G W+Y +D
Sbjct: 117 YWLEKAAIHQYQPGLGEDVVGGWWYPED 144



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>S17P_CHLRE (P46284) Sedoheptulose-1,7-bisphosphatase, chloroplast precursor|
           (EC 3.1.3.37) (Sedoheptulose-bisphosphatase) (SBPase)
           (SED(1,7)P2ase)
          Length = 389

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 14/52 (26%), Positives = 24/52 (46%)
 Frame = -1

Query: 303 GRWFYIKDTSHIQDVLKFEYDNARAARKKVATDXGLQVSADGLYAWSISGGV 148
           G+W ++K+T+HI +   F   N RA     A +  +       Y    +GG+
Sbjct: 240 GKWMHVKETTHIGEGKMFAPGNLRATFDNPAYERLINFYLGEKYTLRYTGGI 291



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>GLPK3_HUMAN (Q14409) Glycerol kinase, testis specific 1 (EC 2.7.1.30)|
           (ATP:glycerol 3-phosphotransferase) (Glycerokinase) (GK)
          Length = 553

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = -1

Query: 258 LKFEYDNARAARKKVATDXGLQVSADGLYAWSISGGVRTCVAWQDV 121
           L++  DN R  +K V     L  + D    WS++GGV   V   DV
Sbjct: 154 LRWLLDNVRKVQKAVEEKRALFGTIDSWLIWSLTGGVNGGVHCTDV 199



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>GLPK2_HUMAN (Q14410) Glycerol kinase, testis specific 2 (EC 2.7.1.30)|
           (ATP:glycerol 3-phosphotransferase) (Glycerokinase) (GK)
          Length = 553

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = -1

Query: 258 LKFEYDNARAARKKVATDXGLQVSADGLYAWSISGGVRTCVAWQDV 121
           L++  DN R  +K V     L  + D    WS++GGV   V   DV
Sbjct: 154 LRWMLDNVRNVQKAVEEGRALFGTIDSWLIWSLTGGVNGGVHCTDV 199



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>GLPK_HUMAN (P32189) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol|
           3-phosphotransferase) (Glycerokinase) (GK)
          Length = 524

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = -1

Query: 258 LKFEYDNARAARKKVATDXGLQVSADGLYAWSISGGVRTCVAWQDV 121
           L++  DN R  +K V     L  + D    WS++GGV   V   DV
Sbjct: 154 LRWLLDNVRKVQKAVEEKRALFGTIDSWLIWSLTGGVNGGVHCTDV 199


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,567,057
Number of Sequences: 219361
Number of extensions: 1501103
Number of successful extensions: 3909
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3908
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3188886965
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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