ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal33i18 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_469935.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4068 Score = 396 bits (200), Expect = e-107 Identities = 399/463 (86%), Gaps = 8/463 (1%) Strand = Plus / Minus Query: 207 gacgtcgaggccgcagagctccttgacg-tcggccatggtggccggcacgtccatctgga 265 |||||| ||||||||||||||||||||| ||||| || || ||||||||||||||||||| Sbjct: 4029 gacgtcaaggccgcagagctccttgacgatcggc-atcgtcgccggcacgtccatctgga 3971 Query: 266 acgtcagcggcgagct------ggcggagaattccttcctggccgccctgatagcctccc 319 ||||||||||||||| | ||| ||| |||||||||||||||||||| ||||||| Sbjct: 3970 acgtcagcggcgagcctccggcgccggcgaactccttcctggccgccctgatcgcctccc 3911 Query: 320 gcatcgcgcagtgcaccgacgccgccatcagcagcggcggctcgccggacgccttggagg 379 |||||||||||||||||||| ||||| ||||||||||||||| |||||||| ||||||| Sbjct: 3910 tcatcgcgcagtgcaccgacgacgccagcagcagcggcggctcaccggacgctttggagg 3851 Query: 380 agagcacccttttcttgtcgtgcgcgctggctatgagctccacgtttagctgcttgggga 439 |||| || | || | ||| | |||||| |||||||| ||||| | ||||||||||| Sbjct: 3850 agaggacgcgcttgtgatcgcgggcgctgttgatgagctcgacgttgaactgcttgggga 3791 Query: 440 tggtgtccaccgtggggatcttgtacgtccaggtgccgtcgttcaccaccagcccgtcgg 499 |||||||||| |||||||||||||||||||| ||||||||||| | |||||||| |||| Sbjct: 3790 tggtgtccacggtggggatcttgtacgtccacgtgccgtcgttgatgaccagcccatcgg 3731 Query: 500 cgttcgtcgtgtactcctcgttcgtgaagaacccaaccccttgcacgaatgcgccctcca 559 ||| |||||||||||||||||||||||||| || | |||||||||||||||||| |||| Sbjct: 3730 agttggtcgtgtactcctcgttcgtgaagaagccgatcccttgcacgaatgcgccttcca 3671 Query: 560 cctggccgaggtccaccgccgggttcaggctctgcccgcagtcgtacaccaggtcgctcc 619 ||||||| | |||||| || || |||||||||||||| ||||||||||| |||||||||| Sbjct: 3670 cctggcccaagtccacagcaggattcaggctctgcccacagtcgtacacgaggtcgctcc 3611 Query: 620 gcaggatcgtcgtcgctccggtcagcacgtctatttccacctc 662 |||||| || || |||| |||||||| || | ||||||||| Sbjct: 3610 tcaggatggtggtttctcccgtcagcacatcgacttccacctc 3568
>ref|XM_469934.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4071 Score = 396 bits (200), Expect = e-107 Identities = 399/463 (86%), Gaps = 8/463 (1%) Strand = Plus / Minus Query: 207 gacgtcgaggccgcagagctccttgacg-tcggccatggtggccggcacgtccatctgga 265 |||||||||||||||||||||||||||| ||||| || || ||||||||||||||||||| Sbjct: 4032 gacgtcgaggccgcagagctccttgacgatcggc-atcgtcgccggcacgtccatctgga 3974 Query: 266 acgtcagcggcgagctggcggag------aattccttcctggccgccctgatagcctccc 319 ||||||||| ||||| | ||| | || |||||||||||||||||||| ||||||| Sbjct: 3973 acgtcagcgacgagccgccggcgccggcgaactccttcctggccgccctgatcgcctccc 3914 Query: 320 gcatcgcgcagtgcaccgacgccgccatcagcagcggcggctcgccggacgccttggagg 379 |||||||||||||||||||| ||||| ||||||||||||||| |||||||| ||||||| Sbjct: 3913 tcatcgcgcagtgcaccgacgacgccagcagcagcggcggctcaccggacgctttggagg 3854 Query: 380 agagcacccttttcttgtcgtgcgcgctggctatgagctccacgtttagctgcttgggga 439 |||| || | || | ||| | |||||| |||||||| ||||| | ||||||||||| Sbjct: 3853 agaggacgcgcttgtgatcgcgggcgctgttgatgagctcgacgttgaactgcttgggga 3794 Query: 440 tggtgtccaccgtggggatcttgtacgtccaggtgccgtcgttcaccaccagcccgtcgg 499 |||||||||| |||||||||||||||||||| ||||||||||| | |||||||| |||| Sbjct: 3793 tggtgtccacggtggggatcttgtacgtccacgtgccgtcgttgatgaccagcccatcgg 3734 Query: 500 cgttcgtcgtgtactcctcgttcgtgaagaacccaaccccttgcacgaatgcgccctcca 559 ||| |||||||||||||||||||||||||| || | |||||||||||||||||| |||| Sbjct: 3733 agttggtcgtgtactcctcgttcgtgaagaagccgatcccttgcacgaatgcgccttcca 3674 Query: 560 cctggccgaggtccaccgccgggttcaggctctgcccgcagtcgtacaccaggtcgctcc 619 ||||||| | |||||| || || |||||||||||||| ||||||||||| |||||||||| Sbjct: 3673 cctggcccaagtccacagcaggattcaggctctgcccacagtcgtacacgaggtcgctcc 3614 Query: 620 gcaggatcgtcgtcgctccggtcagcacgtctatttccacctc 662 |||||| || || |||| |||||||| || | ||||||||| Sbjct: 3613 tcaggatggtggtttctcccgtcagcacatcgacttccacctc 3571
>dbj|AK121857.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033102I02, full insert sequence Length = 3508 Score = 396 bits (200), Expect = e-107 Identities = 399/463 (86%), Gaps = 8/463 (1%) Strand = Plus / Minus Query: 207 gacgtcgaggccgcagagctccttgacg-tcggccatggtggccggcacgtccatctgga 265 |||||| ||||||||||||||||||||| ||||| || || ||||||||||||||||||| Sbjct: 3327 gacgtcaaggccgcagagctccttgacgatcggc-atcgtcgccggcacgtccatctgga 3269 Query: 266 acgtcagcggcgagct------ggcggagaattccttcctggccgccctgatagcctccc 319 ||||||||||||||| | ||| ||| |||||||||||||||||||| ||||||| Sbjct: 3268 acgtcagcggcgagcctccggcgccggcgaactccttcctggccgccctgatcgcctccc 3209 Query: 320 gcatcgcgcagtgcaccgacgccgccatcagcagcggcggctcgccggacgccttggagg 379 |||||||||||||||||||| ||||| ||||||||||||||| |||||||| ||||||| Sbjct: 3208 tcatcgcgcagtgcaccgacgacgccagcagcagcggcggctcaccggacgctttggagg 3149 Query: 380 agagcacccttttcttgtcgtgcgcgctggctatgagctccacgtttagctgcttgggga 439 |||| || | || | ||| | |||||| |||||||| ||||| | ||||||||||| Sbjct: 3148 agaggacgcgcttgtgatcgcgggcgctgttgatgagctcgacgttgaactgcttgggga 3089 Query: 440 tggtgtccaccgtggggatcttgtacgtccaggtgccgtcgttcaccaccagcccgtcgg 499 |||||||||| |||||||||||||||||||| ||||||||||| | |||||||| |||| Sbjct: 3088 tggtgtccacggtggggatcttgtacgtccacgtgccgtcgttgatgaccagcccatcgg 3029 Query: 500 cgttcgtcgtgtactcctcgttcgtgaagaacccaaccccttgcacgaatgcgccctcca 559 ||| |||||||||||||||||||||||||| || | |||||||||||||||||| |||| Sbjct: 3028 agttggtcgtgtactcctcgttcgtgaagaagccgatcccttgcacgaatgcgccttcca 2969 Query: 560 cctggccgaggtccaccgccgggttcaggctctgcccgcagtcgtacaccaggtcgctcc 619 ||||||| | |||||| || || |||||||||||||| ||||||||||| |||||||||| Sbjct: 2968 cctggcccaagtccacagcaggattcaggctctgcccacagtcgtacacgaggtcgctcc 2909 Query: 620 gcaggatcgtcgtcgctccggtcagcacgtctatttccacctc 662 |||||| || || |||| |||||||| || | ||||||||| Sbjct: 2908 tcaggatggtggtttctcccgtcagcacatcgacttccacctc 2866
>dbj|AK100342.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082B09, full insert sequence Length = 4432 Score = 396 bits (200), Expect = e-107 Identities = 399/463 (86%), Gaps = 8/463 (1%) Strand = Plus / Minus Query: 207 gacgtcgaggccgcagagctccttgacg-tcggccatggtggccggcacgtccatctgga 265 |||||| ||||||||||||||||||||| ||||| || || ||||||||||||||||||| Sbjct: 4222 gacgtcaaggccgcagagctccttgacgatcggc-atcgtcgccggcacgtccatctgga 4164 Query: 266 acgtcagcggcgagct------ggcggagaattccttcctggccgccctgatagcctccc 319 ||||||||||||||| | ||| ||| |||||||||||||||||||| ||||||| Sbjct: 4163 acgtcagcggcgagcctccggcgccggcgaactccttcctggccgccctgatcgcctccc 4104 Query: 320 gcatcgcgcagtgcaccgacgccgccatcagcagcggcggctcgccggacgccttggagg 379 |||||||||||||||||||| ||||| ||||||||||||||| |||||||| ||||||| Sbjct: 4103 tcatcgcgcagtgcaccgacgacgccagcagcagcggcggctcaccggacgctttggagg 4044 Query: 380 agagcacccttttcttgtcgtgcgcgctggctatgagctccacgtttagctgcttgggga 439 |||| || | || | ||| | |||||| |||||||| ||||| | ||||||||||| Sbjct: 4043 agaggacgcgcttgtgatcgcgggcgctgttgatgagctcgacgttgaactgcttgggga 3984 Query: 440 tggtgtccaccgtggggatcttgtacgtccaggtgccgtcgttcaccaccagcccgtcgg 499 |||||||||| |||||||||||||||||||| ||||||||||| | |||||||| |||| Sbjct: 3983 tggtgtccacggtggggatcttgtacgtccacgtgccgtcgttgatgaccagcccatcgg 3924 Query: 500 cgttcgtcgtgtactcctcgttcgtgaagaacccaaccccttgcacgaatgcgccctcca 559 ||| |||||||||||||||||||||||||| || | |||||||||||||||||| |||| Sbjct: 3923 agttggtcgtgtactcctcgttcgtgaagaagccgatcccttgcacgaatgcgccttcca 3864 Query: 560 cctggccgaggtccaccgccgggttcaggctctgcccgcagtcgtacaccaggtcgctcc 619 ||||||| | |||||| || || |||||||||||||| ||||||||||| |||||||||| Sbjct: 3863 cctggcccaagtccacagcaggattcaggctctgcccacagtcgtacacgaggtcgctcc 3804 Query: 620 gcaggatcgtcgtcgctccggtcagcacgtctatttccacctc 662 |||||| || || |||| |||||||| || | ||||||||| Sbjct: 3803 tcaggatggtggtttctcccgtcagcacatcgacttccacctc 3761
>dbj|AK065990.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044D18, full insert sequence Length = 3113 Score = 396 bits (200), Expect = e-107 Identities = 399/463 (86%), Gaps = 8/463 (1%) Strand = Plus / Minus Query: 207 gacgtcgaggccgcagagctccttgacg-tcggccatggtggccggcacgtccatctgga 265 |||||| ||||||||||||||||||||| ||||| || || ||||||||||||||||||| Sbjct: 2932 gacgtcaaggccgcagagctccttgacgatcggc-atcgtcgccggcacgtccatctgga 2874 Query: 266 acgtcagcggcgagct------ggcggagaattccttcctggccgccctgatagcctccc 319 ||||||||||||||| | ||| ||| |||||||||||||||||||| ||||||| Sbjct: 2873 acgtcagcggcgagcctccggcgccggcgaactccttcctggccgccctgatcgcctccc 2814 Query: 320 gcatcgcgcagtgcaccgacgccgccatcagcagcggcggctcgccggacgccttggagg 379 |||||||||||||||||||| ||||| ||||||||||||||| |||||||| ||||||| Sbjct: 2813 tcatcgcgcagtgcaccgacgacgccagcagcagcggcggctcaccggacgctttggagg 2754 Query: 380 agagcacccttttcttgtcgtgcgcgctggctatgagctccacgtttagctgcttgggga 439 |||| || | || | ||| | |||||| |||||||| ||||| | ||||||||||| Sbjct: 2753 agaggacgcgcttgtgatcgcgggcgctgttgatgagctcgacgttgaactgcttgggga 2694 Query: 440 tggtgtccaccgtggggatcttgtacgtccaggtgccgtcgttcaccaccagcccgtcgg 499 |||||||||| |||||||||||||||||||| ||||||||||| | |||||||| |||| Sbjct: 2693 tggtgtccacggtggggatcttgtacgtccacgtgccgtcgttgatgaccagcccatcgg 2634 Query: 500 cgttcgtcgtgtactcctcgttcgtgaagaacccaaccccttgcacgaatgcgccctcca 559 ||| |||||||||||||||||||||||||| || | |||||||||||||||||| |||| Sbjct: 2633 agttggtcgtgtactcctcgttcgtgaagaagccgatcccttgcacgaatgcgccttcca 2574 Query: 560 cctggccgaggtccaccgccgggttcaggctctgcccgcagtcgtacaccaggtcgctcc 619 ||||||| | |||||| || || |||||||||||||| ||||||||||| |||||||||| Sbjct: 2573 cctggcccaagtccacagcaggattcaggctctgcccacagtcgtacacgaggtcgctcc 2514 Query: 620 gcaggatcgtcgtcgctccggtcagcacgtctatttccacctc 662 |||||| || || |||| |||||||| || | ||||||||| Sbjct: 2513 tcaggatggtggtttctcccgtcagcacatcgacttccacctc 2471
>dbj|AK059698.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-C05, full insert sequence Length = 1134 Score = 396 bits (200), Expect = e-107 Identities = 399/463 (86%), Gaps = 8/463 (1%) Strand = Plus / Minus Query: 207 gacgtcgaggccgcagagctccttgacg-tcggccatggtggccggcacgtccatctgga 265 |||||| ||||||||||||||||||||| ||||| || || ||||||||||||||||||| Sbjct: 964 gacgtcaaggccgcagagctccttgacgatcggc-atcgtcgccggcacgtccatctgga 906 Query: 266 acgtcagcggcgagct------ggcggagaattccttcctggccgccctgatagcctccc 319 ||||||||||||||| | ||| ||| |||||||||||||||||||| ||||||| Sbjct: 905 acgtcagcggcgagcctccggcgccggcgaactccttcctggccgccctgatcgcctccc 846 Query: 320 gcatcgcgcagtgcaccgacgccgccatcagcagcggcggctcgccggacgccttggagg 379 |||||||||||||||||||| ||||| ||||||||||||||| |||||||| ||||||| Sbjct: 845 tcatcgcgcagtgcaccgacgacgccagcagcagcggcggctcaccggacgctttggagg 786 Query: 380 agagcacccttttcttgtcgtgcgcgctggctatgagctccacgtttagctgcttgggga 439 |||| || | || | ||| | |||||| |||||||| ||||| | ||||||||||| Sbjct: 785 agaggacgcgcttgtgatcgcgggcgctgttgatgagctcgacgttgaactgcttgggga 726 Query: 440 tggtgtccaccgtggggatcttgtacgtccaggtgccgtcgttcaccaccagcccgtcgg 499 |||||||||| |||||||||||||||||||| ||||||||||| | |||||||| |||| Sbjct: 725 tggtgtccacggtggggatcttgtacgtccacgtgccgtcgttgatgaccagcccatcgg 666 Query: 500 cgttcgtcgtgtactcctcgttcgtgaagaacccaaccccttgcacgaatgcgccctcca 559 ||| |||||||||||||||||||||||||| || | |||||||||||||||||| |||| Sbjct: 665 agttggtcgtgtactcctcgttcgtgaagaagccgatcccttgcacgaatgcgccttcca 606 Query: 560 cctggccgaggtccaccgccgggttcaggctctgcccgcagtcgtacaccaggtcgctcc 619 ||||||| | |||||| || || |||||||||||||| ||||||||||| |||||||||| Sbjct: 605 cctggcccaagtccacagcaggattcaggctctgcccacagtcgtacacgaggtcgctcc 546 Query: 620 gcaggatcgtcgtcgctccggtcagcacgtctatttccacctc 662 |||||| || || |||| |||||||| || | ||||||||| Sbjct: 545 tcaggatggtggtttctcccgtcagcacatcgacttccacctc 503
>ref|XM_469938.1| Oryza sativa (japonica cultivar-group), mRNA Length = 480 Score = 246 bits (124), Expect = 9e-62 Identities = 314/376 (83%), Gaps = 11/376 (2%) Strand = Plus / Minus Query: 198 cctctcgatgacgtcgaggccgcagagctccttgacgtcggccatggtggccggcacgtc 257 |||||||| |||||||||||||||||||||||||||| | | ||| || ||||||||||| Sbjct: 394 cctctcgacgacgtcgaggccgcagagctccttgacggccggcatcgtcgccggcacgtc 335 Query: 258 catctggaacgtcagcggcgagctggcggag------aattccttcctggccgccctgat 311 ||||||||| |||| || ||||| | ||| | || |||||||||||||||||||| Sbjct: 334 catctggaaagtcatcgccgagccgccggcgccggcgaactccttcctggccgccctgat 275 Query: 312 ag----cctcccgcatcgcgcagtgcaccgacgccgccatcagcagcggcggct-cgccg 366 | |||||| |||||||||||||||||||| ||||| |||| ||||||||| | ||| Sbjct: 274 tgatcgcctccctcatcgcgcagtgcaccgacgacgccagcagcggcggcggcttcaccg 215 Query: 367 gacgccttggaggagagcacccttttcttgtcgtgcgcgctggctatgagctccacgttt 426 ||||| ||||||||||| || | || | || | |||||| |||||||| ||||| Sbjct: 214 gacgctttggaggagaggacgcgcttgtgaacgcgggcgctgttgatgagctcgacgttg 155 Query: 427 agctgcttggggatggtgtccaccgtggggatcttgtacgtccaggtgccgtcgttcacc 486 | ||||||||||||||||||||| |||||||||||||||||||| |||| ||||| | Sbjct: 154 aactgcttggggatggtgtccacggtggggatcttgtacgtccacgtgctgtcgtggatg 95 Query: 487 accagcccgtcggcgttcgtcgtgtactcctcgttcgtgaagaacccaaccccttgcacg 546 |||||||| |||| ||| |||| ||||||||||||||||||||| || | |||||||||| Sbjct: 94 accagcccatcggagttggtcgcgtactcctcgttcgtgaagaagccgatcccttgcacg 35 Query: 547 aatgcgccctccacct 562 |||||||| ||||||| Sbjct: 34 aatgcgccttccacct 19
>ref|NM_194783.1| Oryza sativa (japonica cultivar-group) putative aldehyde oxidase (OSJNAa0087H07.7), mRNA Length = 4077 Score = 212 bits (107), Expect = 1e-51 Identities = 215/251 (85%) Strand = Plus / Minus Query: 412 atgagctccacgtttagctgcttggggatggtgtccaccgtggggatcttgtacgtccag 471 |||||||| ||||| | |||||||||||||||||| || |||||||||||||||||||| Sbjct: 3806 atgagctcgacgttgaactgcttggggatggtgtctacggtggggatcttgtacgtccat 3747 Query: 472 gtgccgtcgttcaccaccagcccgtcggcgttcgtcgtgtactcctcgttcgtgaagaac 531 |||||||||| | |||||||| |||||||| |||| ||||||||||||||||||||| Sbjct: 3746 gtgccgtcgtggatgaccagcccatcggcgttggtcgcgtactcctcgttcgtgaagaag 3687 Query: 532 ccaaccccttgcacgaatgcgccctccacctggccgaggtccaccgccgggttcaggctc 591 || || ||||||||||| ||||| ||||||||||| | ||| || || || ||||||||| Sbjct: 3686 cccacaccttgcacgaacgcgccttccacctggcctaagtcgacagcaggattcaggctc 3627 Query: 592 tgcccgcagtcgtacaccaggtcgctccgcaggatcgtcgtcgctccggtcagcacgtct 651 ||||| ||||| ||||| |||||||||| |||||| || || || || |||||||| || Sbjct: 3626 tgcccacagtcatacacgaggtcgctcctcaggatggtggttgcccctgtcagcacatcg 3567 Query: 652 atttccacctc 662 | ||||||||| Sbjct: 3566 acttccacctc 3556 Score = 101 bits (51), Expect = 3e-18 Identities = 75/83 (90%) Strand = Plus / Minus Query: 301 gccgccctgatagcctcccgcatcgcgcagtgcaccgacgccgccatcagcagcggcggc 360 ||||||||||| ||||||| ||||||||||||||| |||| ||||| ||||||||||||| Sbjct: 3917 gccgccctgatcgcctccctcatcgcgcagtgcacggacgacgccagcagcagcggcggc 3858 Query: 361 tcgccggacgccttggaggagag 383 || |||||||| || |||||||| Sbjct: 3857 tcaccggacgcttttgaggagag 3835 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 198 cctctcgatgacgtcgaggccgcagagctccttgacgtcggccatggtggccggcacgtc 257 |||||| | |||||||||||||||||||||||||||| | | ||| || ||||||||||| Sbjct: 4044 cctctccacgacgtcgaggccgcagagctccttgacggccggcatcgtcgccggcacgtc 3985 Query: 258 catctggaacg 268 ||||||||||| Sbjct: 3984 catctggaacg 3974
>dbj|AK121557.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033J23, full insert sequence Length = 5069 Score = 212 bits (107), Expect = 1e-51 Identities = 215/251 (85%) Strand = Plus / Minus Query: 412 atgagctccacgtttagctgcttggggatggtgtccaccgtggggatcttgtacgtccag 471 |||||||| ||||| | |||||||||||||||||| || |||||||||||||||||||| Sbjct: 3895 atgagctcgacgttgaactgcttggggatggtgtctacggtggggatcttgtacgtccat 3836 Query: 472 gtgccgtcgttcaccaccagcccgtcggcgttcgtcgtgtactcctcgttcgtgaagaac 531 |||||||||| | |||||||| |||||||| |||| ||||||||||||||||||||| Sbjct: 3835 gtgccgtcgtggatgaccagcccatcggcgttggtcgcgtactcctcgttcgtgaagaag 3776 Query: 532 ccaaccccttgcacgaatgcgccctccacctggccgaggtccaccgccgggttcaggctc 591 || || ||||||||||| ||||| ||||||||||| | ||| || || || ||||||||| Sbjct: 3775 cccacaccttgcacgaacgcgccttccacctggcctaagtcgacagcaggattcaggctc 3716 Query: 592 tgcccgcagtcgtacaccaggtcgctccgcaggatcgtcgtcgctccggtcagcacgtct 651 ||||| ||||| ||||| |||||||||| |||||| || || || || |||||||| || Sbjct: 3715 tgcccacagtcatacacgaggtcgctcctcaggatggtggttgcccctgtcagcacatcg 3656 Query: 652 atttccacctc 662 | ||||||||| Sbjct: 3655 acttccacctc 3645 Score = 93.7 bits (47), Expect = 8e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 301 gccgccctgatagcctcccgcatcgcgcagtgcaccgacgccgccatcagcagcggcggc 360 ||||||||||| ||||||| |||||||||| |||| |||| ||||| ||||||||||||| Sbjct: 4006 gccgccctgatcgcctccctcatcgcgcagcgcacggacgacgccagcagcagcggcggc 3947 Query: 361 tcgccggacgccttggaggagag 383 || |||||||| || |||||||| Sbjct: 3946 tcaccggacgcttttgaggagag 3924 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 198 cctctcgatgacgtcgaggccgcagagctccttgacgtcggccatggtggccggcacgtc 257 |||||| | |||||||||||||||||||||||||||| | | ||| || ||||||||||| Sbjct: 4133 cctctccacgacgtcgaggccgcagagctccttgacggccggcatcgtcgccggcacgtc 4074 Query: 258 catctggaacg 268 ||||||||||| Sbjct: 4073 catctggaacg 4063
>dbj|AK103597.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133E15, full insert sequence Length = 2514 Score = 212 bits (107), Expect = 1e-51 Identities = 215/251 (85%) Strand = Plus / Minus Query: 412 atgagctccacgtttagctgcttggggatggtgtccaccgtggggatcttgtacgtccag 471 |||||||| ||||| | |||||||||||||||||| || |||||||||||||||||||| Sbjct: 1339 atgagctcgacgttgaactgcttggggatggtgtctacggtggggatcttgtacgtccat 1280 Query: 472 gtgccgtcgttcaccaccagcccgtcggcgttcgtcgtgtactcctcgttcgtgaagaac 531 |||||||||| | |||||||| |||||||| |||| ||||||||||||||||||||| Sbjct: 1279 gtgccgtcgtggatgaccagcccatcggcgttggtcgcgtactcctcgttcgtgaagaag 1220 Query: 532 ccaaccccttgcacgaatgcgccctccacctggccgaggtccaccgccgggttcaggctc 591 || || ||||||||||| ||||| ||||||||||| | ||| || || || ||||||||| Sbjct: 1219 cccacaccttgcacgaacgcgccttccacctggcctaagtcgacagcaggattcaggctc 1160 Query: 592 tgcccgcagtcgtacaccaggtcgctccgcaggatcgtcgtcgctccggtcagcacgtct 651 ||||| ||||| ||||| |||||||||| |||||| || || || || |||||||| || Sbjct: 1159 tgcccacagtcatacacgaggtcgctcctcaggatggtggttgcccctgtcagcacatcg 1100 Query: 652 atttccacctc 662 | ||||||||| Sbjct: 1099 acttccacctc 1089 Score = 101 bits (51), Expect = 3e-18 Identities = 75/83 (90%) Strand = Plus / Minus Query: 301 gccgccctgatagcctcccgcatcgcgcagtgcaccgacgccgccatcagcagcggcggc 360 ||||||||||| ||||||| ||||||||||||||| |||| ||||| ||||||||||||| Sbjct: 1450 gccgccctgatcgcctccctcatcgcgcagtgcacggacgacgccagcagcagcggcggc 1391 Query: 361 tcgccggacgccttggaggagag 383 || |||||||| || |||||||| Sbjct: 1390 tcaccggacgcttttgaggagag 1368 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 198 cctctcgatgacgtcgaggccgcagagctccttgacgtcggccatggtggccggcacgtc 257 |||||| | |||||||||||||||||||||||||||| | | ||| || ||||||||||| Sbjct: 1577 cctctctacgacgtcgaggccgcagagctccttgacggccggcatcgtcgccggcacgtc 1518 Query: 258 catctggaacg 268 ||||||||||| Sbjct: 1517 catctggaacg 1507
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 182 bits (92), Expect = 1e-42 Identities = 137/152 (90%) Strand = Plus / Plus Query: 412 atgagctccacgtttagctgcttggggatggtgtccaccgtggggatcttgtacgtccag 471 |||||||| ||||| | ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 32575974 atgagctcgacgttgaactgcttggggatggtgtccacggtggggatcttgtacgtccac 32576033 Query: 472 gtgccgtcgttcaccaccagcccgtcggcgttcgtcgtgtactcctcgttcgtgaagaac 531 ||||||||||| | |||||||| |||| ||| |||||||||||||||||||||||||| Sbjct: 32576034 gtgccgtcgttgatgaccagcccatcggagttggtcgtgtactcctcgttcgtgaagaag 32576093 Query: 532 ccaaccccttgcacgaatgcgccctccacctg 563 || | |||||||||||||||||| |||||||| Sbjct: 32576094 ccgatcccttgcacgaatgcgccttccacctg 32576125 Score = 182 bits (92), Expect = 1e-42 Identities = 137/152 (90%) Strand = Plus / Plus Query: 412 atgagctccacgtttagctgcttggggatggtgtccaccgtggggatcttgtacgtccag 471 |||||||| ||||| | ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 32565892 atgagctcgacgttgaactgcttggggatggtgtccacggtggggatcttgtacgtccac 32565951 Query: 472 gtgccgtcgttcaccaccagcccgtcggcgttcgtcgtgtactcctcgttcgtgaagaac 531 ||||||||||| | |||||||| |||| ||| |||||||||||||||||||||||||| Sbjct: 32565952 gtgccgtcgttgatgaccagcccatcggagttggtcgtgtactcctcgttcgtgaagaag 32566011 Query: 532 ccaaccccttgcacgaatgcgccctccacctg 563 || | |||||||||||||||||| |||||||| Sbjct: 32566012 ccgatcccttgcacgaatgcgccttccacctg 32566043 Score = 168 bits (85), Expect = 2e-38 Identities = 152/172 (88%), Gaps = 8/172 (4%) Strand = Plus / Plus Query: 207 gacgtcgaggccgcagagctccttgacg-tcggccatggtggccggcacgtccatctgga 265 |||||| ||||||||||||||||||||| ||||| || || ||||||||||||||||||| Sbjct: 32575681 gacgtcaaggccgcagagctccttgacgatcggc-atcgtcgccggcacgtccatctgga 32575739 Query: 266 acgtcagcggcgagct------ggcggagaattccttcctggccgccctgatagcctccc 319 ||||||||||||||| | ||| ||| |||||||||||||||||||| ||||||| Sbjct: 32575740 acgtcagcggcgagcctccggcgccggcgaactccttcctggccgccctgatcgcctccc 32575799 Query: 320 gcatcgcgcagtgcaccgacgccgccatcagcagcggcggctcgccggacgc 371 |||||||||||||||||||| ||||| ||||||||||||||| |||||||| Sbjct: 32575800 tcatcgcgcagtgcaccgacgacgccagcagcagcggcggctcaccggacgc 32575851 Score = 168 bits (85), Expect = 2e-38 Identities = 152/172 (88%), Gaps = 8/172 (4%) Strand = Plus / Plus Query: 207 gacgtcgaggccgcagagctccttgacg-tcggccatggtggccggcacgtccatctgga 265 |||||||||||||||||||||||||||| ||||| || || ||||||||||||||||||| Sbjct: 32565597 gacgtcgaggccgcagagctccttgacgatcggc-atcgtcgccggcacgtccatctgga 32565655 Query: 266 acgtcagcggcgagctggcggag------aattccttcctggccgccctgatagcctccc 319 ||||||||| ||||| | ||| | || |||||||||||||||||||| ||||||| Sbjct: 32565656 acgtcagcgacgagccgccggcgccggcgaactccttcctggccgccctgatcgcctccc 32565715 Query: 320 gcatcgcgcagtgcaccgacgccgccatcagcagcggcggctcgccggacgc 371 |||||||||||||||||||| ||||| ||||||||||||||| |||||||| Sbjct: 32565716 tcatcgcgcagtgcaccgacgacgccagcagcagcggcggctcaccggacgc 32565767 Score = 157 bits (79), Expect = 6e-35 Identities = 133/151 (88%) Strand = Plus / Plus Query: 412 atgagctccacgtttagctgcttggggatggtgtccaccgtggggatcttgtacgtccag 471 |||||||| ||||| | ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 32594321 atgagctcgacgttgaactgcttggggatggtgtccacggtggggatcttgtacgtccac 32594380 Query: 472 gtgccgtcgttcaccaccagcccgtcggcgttcgtcgtgtactcctcgttcgtgaagaac 531 |||| ||||| | |||||||| |||| ||| |||| ||||||||||||||||||||| Sbjct: 32594381 gtgctgtcgtggatgaccagcccatcggagttggtcgcgtactcctcgttcgtgaagaag 32594440 Query: 532 ccaaccccttgcacgaatgcgccctccacct 562 || | |||||||||||||||||| ||||||| Sbjct: 32594441 ccgatcccttgcacgaatgcgccttccacct 32594471 Score = 123 bits (62), Expect = 9e-25 Identities = 146/174 (83%), Gaps = 10/174 (5%) Strand = Plus / Plus Query: 198 cctctcgatgacgtcgaggccgcagagctccttgacgtcggccatggtggccggcacgtc 257 |||||||| |||||||||||||||||||||||||||| | | ||| || ||||||||||| Sbjct: 32593991 cctctcgacgacgtcgaggccgcagagctccttgacggccggcatcgtcgccggcacgtc 32594050 Query: 258 catctggaacgtcagcggcgagc------tggcggagaattccttcctggccgccc---- 307 ||||||||| |||| || ||||| | ||| ||| |||||||||||||||| Sbjct: 32594051 catctggaaagtcatcgccgagccgccggcgccggcgaactccttcctggccgccctgat 32594110 Query: 308 tgatagcctcccgcatcgcgcagtgcaccgacgccgccatcagcagcggcggct 361 |||| ||||||| |||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 32594111 tgatcgcctccctcatcgcgcagtgcaccgacgacgccagcagcggcggcggct 32594164 Score = 103 bits (52), Expect = 8e-19 Identities = 73/80 (91%) Strand = Plus / Plus Query: 292 tccttcctggccgccctgatagcctcccgcatcgcgcagtgcaccgacgccgccatcagc 351 ||||||| |||||||||||| ||||||| |||||||||||||||||||| ||||| |||| Sbjct: 32952227 tccttccgggccgccctgatcgcctccctcatcgcgcagtgcaccgacgacgccagcagc 32952286 Query: 352 agcggcggctcgccggacgc 371 |||||||||| |||||||| Sbjct: 32952287 ggcggcggctcaccggacgc 32952306 Score = 77.8 bits (39), Expect = 5e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 559 acctggccgaggtccaccgccgggttcaggctctgcccgcagtcgtacaccaggtcgctc 618 |||||||| | |||||| || || |||||||||||||| ||||||||||| ||||||||| Sbjct: 32576252 acctggcccaagtccacagcaggattcaggctctgcccacagtcgtacacgaggtcgctc 32576311 Query: 619 cgcaggatcgtcgtcgctccggtcagcacgtctatttccacct 661 | |||||| || || |||| |||||||| || | |||||||| Sbjct: 32576312 ctcaggatggtggtttctcccgtcagcacatcgacttccacct 32576354 Score = 77.8 bits (39), Expect = 5e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 559 acctggccgaggtccaccgccgggttcaggctctgcccgcagtcgtacaccaggtcgctc 618 |||||||| | |||||| || || |||||||||||||| ||||||||||| ||||||||| Sbjct: 32566170 acctggcccaagtccacagcaggattcaggctctgcccacagtcgtacacgaggtcgctc 32566229 Query: 619 cgcaggatcgtcgtcgctccggtcagcacgtctatttccacct 661 | |||||| || || |||| |||||||| || | |||||||| Sbjct: 32566230 ctcaggatggtggtttctcccgtcagcacatcgacttccacct 32566272 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 487 accagcccgtcggcgttcgtcgtgtactcctcgttcgtgaagaacccaaccccttgcacg 546 |||||||| |||| ||| |||| |||||| || ||||||||||| || | |||||||||| Sbjct: 32952577 accagcccatcggagttggtcgcgtactcatcattcgtgaagaagccgatcccttgcacg 32952636 Query: 547 aatgcgcc 554 || ||||| Sbjct: 32952637 aacgcgcc 32952644 Score = 44.1 bits (22), Expect = 0.63 Identities = 34/38 (89%) Strand = Plus / Plus Query: 412 atgagctccacgtttagctgcttggggatggtgtccac 449 |||||||| ||||| | ||||||| ||||||||||||| Sbjct: 32952519 atgagctcgacgttgaactgcttgaggatggtgtccac 32952556
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 182 bits (92), Expect = 1e-42 Identities = 137/152 (90%) Strand = Plus / Plus Query: 412 atgagctccacgtttagctgcttggggatggtgtccaccgtggggatcttgtacgtccag 471 |||||||| ||||| | ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 32666484 atgagctcgacgttgaactgcttggggatggtgtccacggtggggatcttgtacgtccac 32666543 Query: 472 gtgccgtcgttcaccaccagcccgtcggcgttcgtcgtgtactcctcgttcgtgaagaac 531 ||||||||||| | |||||||| |||| ||| |||||||||||||||||||||||||| Sbjct: 32666544 gtgccgtcgttgatgaccagcccatcggagttggtcgtgtactcctcgttcgtgaagaag 32666603 Query: 532 ccaaccccttgcacgaatgcgccctccacctg 563 || | |||||||||||||||||| |||||||| Sbjct: 32666604 ccgatcccttgcacgaatgcgccttccacctg 32666635 Score = 182 bits (92), Expect = 1e-42 Identities = 137/152 (90%) Strand = Plus / Plus Query: 412 atgagctccacgtttagctgcttggggatggtgtccaccgtggggatcttgtacgtccag 471 |||||||| ||||| | ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 32656402 atgagctcgacgttgaactgcttggggatggtgtccacggtggggatcttgtacgtccac 32656461 Query: 472 gtgccgtcgttcaccaccagcccgtcggcgttcgtcgtgtactcctcgttcgtgaagaac 531 ||||||||||| | |||||||| |||| ||| |||||||||||||||||||||||||| Sbjct: 32656462 gtgccgtcgttgatgaccagcccatcggagttggtcgtgtactcctcgttcgtgaagaag 32656521 Query: 532 ccaaccccttgcacgaatgcgccctccacctg 563 || | |||||||||||||||||| |||||||| Sbjct: 32656522 ccgatcccttgcacgaatgcgccttccacctg 32656553 Score = 168 bits (85), Expect = 2e-38 Identities = 152/172 (88%), Gaps = 8/172 (4%) Strand = Plus / Plus Query: 207 gacgtcgaggccgcagagctccttgacg-tcggccatggtggccggcacgtccatctgga 265 |||||| ||||||||||||||||||||| ||||| || || ||||||||||||||||||| Sbjct: 32666191 gacgtcaaggccgcagagctccttgacgatcggc-atcgtcgccggcacgtccatctgga 32666249 Query: 266 acgtcagcggcgagct------ggcggagaattccttcctggccgccctgatagcctccc 319 ||||||||||||||| | ||| ||| |||||||||||||||||||| ||||||| Sbjct: 32666250 acgtcagcggcgagcctccggcgccggcgaactccttcctggccgccctgatcgcctccc 32666309 Query: 320 gcatcgcgcagtgcaccgacgccgccatcagcagcggcggctcgccggacgc 371 |||||||||||||||||||| ||||| ||||||||||||||| |||||||| Sbjct: 32666310 tcatcgcgcagtgcaccgacgacgccagcagcagcggcggctcaccggacgc 32666361 Score = 168 bits (85), Expect = 2e-38 Identities = 152/172 (88%), Gaps = 8/172 (4%) Strand = Plus / Plus Query: 207 gacgtcgaggccgcagagctccttgacg-tcggccatggtggccggcacgtccatctgga 265 |||||||||||||||||||||||||||| ||||| || || ||||||||||||||||||| Sbjct: 32656107 gacgtcgaggccgcagagctccttgacgatcggc-atcgtcgccggcacgtccatctgga 32656165 Query: 266 acgtcagcggcgagctggcggag------aattccttcctggccgccctgatagcctccc 319 ||||||||| ||||| | ||| | || |||||||||||||||||||| ||||||| Sbjct: 32656166 acgtcagcgacgagccgccggcgccggcgaactccttcctggccgccctgatcgcctccc 32656225 Query: 320 gcatcgcgcagtgcaccgacgccgccatcagcagcggcggctcgccggacgc 371 |||||||||||||||||||| ||||| ||||||||||||||| |||||||| Sbjct: 32656226 tcatcgcgcagtgcaccgacgacgccagcagcagcggcggctcaccggacgc 32656277 Score = 157 bits (79), Expect = 6e-35 Identities = 133/151 (88%) Strand = Plus / Plus Query: 412 atgagctccacgtttagctgcttggggatggtgtccaccgtggggatcttgtacgtccag 471 |||||||| ||||| | ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 32684831 atgagctcgacgttgaactgcttggggatggtgtccacggtggggatcttgtacgtccac 32684890 Query: 472 gtgccgtcgttcaccaccagcccgtcggcgttcgtcgtgtactcctcgttcgtgaagaac 531 |||| ||||| | |||||||| |||| ||| |||| ||||||||||||||||||||| Sbjct: 32684891 gtgctgtcgtggatgaccagcccatcggagttggtcgcgtactcctcgttcgtgaagaag 32684950 Query: 532 ccaaccccttgcacgaatgcgccctccacct 562 || | |||||||||||||||||| ||||||| Sbjct: 32684951 ccgatcccttgcacgaatgcgccttccacct 32684981 Score = 123 bits (62), Expect = 9e-25 Identities = 146/174 (83%), Gaps = 10/174 (5%) Strand = Plus / Plus Query: 198 cctctcgatgacgtcgaggccgcagagctccttgacgtcggccatggtggccggcacgtc 257 |||||||| |||||||||||||||||||||||||||| | | ||| || ||||||||||| Sbjct: 32684501 cctctcgacgacgtcgaggccgcagagctccttgacggccggcatcgtcgccggcacgtc 32684560 Query: 258 catctggaacgtcagcggcgagc------tggcggagaattccttcctggccgccc---- 307 ||||||||| |||| || ||||| | ||| ||| |||||||||||||||| Sbjct: 32684561 catctggaaagtcatcgccgagccgccggcgccggcgaactccttcctggccgccctgat 32684620 Query: 308 tgatagcctcccgcatcgcgcagtgcaccgacgccgccatcagcagcggcggct 361 |||| ||||||| |||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 32684621 tgatcgcctccctcatcgcgcagtgcaccgacgacgccagcagcggcggcggct 32684674 Score = 103 bits (52), Expect = 8e-19 Identities = 73/80 (91%) Strand = Plus / Plus Query: 292 tccttcctggccgccctgatagcctcccgcatcgcgcagtgcaccgacgccgccatcagc 351 ||||||| |||||||||||| ||||||| |||||||||||||||||||| ||||| |||| Sbjct: 33042737 tccttccgggccgccctgatcgcctccctcatcgcgcagtgcaccgacgacgccagcagc 33042796 Query: 352 agcggcggctcgccggacgc 371 |||||||||| |||||||| Sbjct: 33042797 ggcggcggctcaccggacgc 33042816 Score = 77.8 bits (39), Expect = 5e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 559 acctggccgaggtccaccgccgggttcaggctctgcccgcagtcgtacaccaggtcgctc 618 |||||||| | |||||| || || |||||||||||||| ||||||||||| ||||||||| Sbjct: 32666762 acctggcccaagtccacagcaggattcaggctctgcccacagtcgtacacgaggtcgctc 32666821 Query: 619 cgcaggatcgtcgtcgctccggtcagcacgtctatttccacct 661 | |||||| || || |||| |||||||| || | |||||||| Sbjct: 32666822 ctcaggatggtggtttctcccgtcagcacatcgacttccacct 32666864 Score = 77.8 bits (39), Expect = 5e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 559 acctggccgaggtccaccgccgggttcaggctctgcccgcagtcgtacaccaggtcgctc 618 |||||||| | |||||| || || |||||||||||||| ||||||||||| ||||||||| Sbjct: 32656680 acctggcccaagtccacagcaggattcaggctctgcccacagtcgtacacgaggtcgctc 32656739 Query: 619 cgcaggatcgtcgtcgctccggtcagcacgtctatttccacct 661 | |||||| || || |||| |||||||| || | |||||||| Sbjct: 32656740 ctcaggatggtggtttctcccgtcagcacatcgacttccacct 32656782 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 487 accagcccgtcggcgttcgtcgtgtactcctcgttcgtgaagaacccaaccccttgcacg 546 |||||||| |||| ||| |||| |||||| || ||||||||||| || | |||||||||| Sbjct: 33043087 accagcccatcggagttggtcgcgtactcatcattcgtgaagaagccgatcccttgcacg 33043146 Query: 547 aatgcgcc 554 || ||||| Sbjct: 33043147 aacgcgcc 33043154 Score = 44.1 bits (22), Expect = 0.63 Identities = 34/38 (89%) Strand = Plus / Plus Query: 412 atgagctccacgtttagctgcttggggatggtgtccac 449 |||||||| ||||| | ||||||| ||||||||||||| Sbjct: 33043029 atgagctcgacgttgaactgcttgaggatggtgtccac 33043066
>gb|AC087096.11| Oryza sativa chromosome 3 BAC OSJNBa0087O09 genomic sequence, complete sequence Length = 119134 Score = 182 bits (92), Expect = 1e-42 Identities = 137/152 (90%) Strand = Plus / Plus Query: 412 atgagctccacgtttagctgcttggggatggtgtccaccgtggggatcttgtacgtccag 471 |||||||| ||||| | ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 109423 atgagctcgacgttgaactgcttggggatggtgtccacggtggggatcttgtacgtccac 109482 Query: 472 gtgccgtcgttcaccaccagcccgtcggcgttcgtcgtgtactcctcgttcgtgaagaac 531 ||||||||||| | |||||||| |||| ||| |||||||||||||||||||||||||| Sbjct: 109483 gtgccgtcgttgatgaccagcccatcggagttggtcgtgtactcctcgttcgtgaagaag 109542 Query: 532 ccaaccccttgcacgaatgcgccctccacctg 563 || | |||||||||||||||||| |||||||| Sbjct: 109543 ccgatcccttgcacgaatgcgccttccacctg 109574 Score = 182 bits (92), Expect = 1e-42 Identities = 137/152 (90%) Strand = Plus / Plus Query: 412 atgagctccacgtttagctgcttggggatggtgtccaccgtggggatcttgtacgtccag 471 |||||||| ||||| | ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 99341 atgagctcgacgttgaactgcttggggatggtgtccacggtggggatcttgtacgtccac 99400 Query: 472 gtgccgtcgttcaccaccagcccgtcggcgttcgtcgtgtactcctcgttcgtgaagaac 531 ||||||||||| | |||||||| |||| ||| |||||||||||||||||||||||||| Sbjct: 99401 gtgccgtcgttgatgaccagcccatcggagttggtcgtgtactcctcgttcgtgaagaag 99460 Query: 532 ccaaccccttgcacgaatgcgccctccacctg 563 || | |||||||||||||||||| |||||||| Sbjct: 99461 ccgatcccttgcacgaatgcgccttccacctg 99492 Score = 168 bits (85), Expect = 2e-38 Identities = 152/172 (88%), Gaps = 8/172 (4%) Strand = Plus / Plus Query: 207 gacgtcgaggccgcagagctccttgacg-tcggccatggtggccggcacgtccatctgga 265 |||||| ||||||||||||||||||||| ||||| || || ||||||||||||||||||| Sbjct: 109130 gacgtcaaggccgcagagctccttgacgatcggc-atcgtcgccggcacgtccatctgga 109188 Query: 266 acgtcagcggcgagct------ggcggagaattccttcctggccgccctgatagcctccc 319 ||||||||||||||| | ||| ||| |||||||||||||||||||| ||||||| Sbjct: 109189 acgtcagcggcgagcctccggcgccggcgaactccttcctggccgccctgatcgcctccc 109248 Query: 320 gcatcgcgcagtgcaccgacgccgccatcagcagcggcggctcgccggacgc 371 |||||||||||||||||||| ||||| ||||||||||||||| |||||||| Sbjct: 109249 tcatcgcgcagtgcaccgacgacgccagcagcagcggcggctcaccggacgc 109300 Score = 168 bits (85), Expect = 2e-38 Identities = 152/172 (88%), Gaps = 8/172 (4%) Strand = Plus / Plus Query: 207 gacgtcgaggccgcagagctccttgacg-tcggccatggtggccggcacgtccatctgga 265 |||||||||||||||||||||||||||| ||||| || || ||||||||||||||||||| Sbjct: 99046 gacgtcgaggccgcagagctccttgacgatcggc-atcgtcgccggcacgtccatctgga 99104 Query: 266 acgtcagcggcgagctggcggag------aattccttcctggccgccctgatagcctccc 319 ||||||||| ||||| | ||| | || |||||||||||||||||||| ||||||| Sbjct: 99105 acgtcagcgacgagccgccggcgccggcgaactccttcctggccgccctgatcgcctccc 99164 Query: 320 gcatcgcgcagtgcaccgacgccgccatcagcagcggcggctcgccggacgc 371 |||||||||||||||||||| ||||| ||||||||||||||| |||||||| Sbjct: 99165 tcatcgcgcagtgcaccgacgacgccagcagcagcggcggctcaccggacgc 99216 Score = 77.8 bits (39), Expect = 5e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 559 acctggccgaggtccaccgccgggttcaggctctgcccgcagtcgtacaccaggtcgctc 618 |||||||| | |||||| || || |||||||||||||| ||||||||||| ||||||||| Sbjct: 109701 acctggcccaagtccacagcaggattcaggctctgcccacagtcgtacacgaggtcgctc 109760 Query: 619 cgcaggatcgtcgtcgctccggtcagcacgtctatttccacct 661 | |||||| || || |||| |||||||| || | |||||||| Sbjct: 109761 ctcaggatggtggtttctcccgtcagcacatcgacttccacct 109803 Score = 77.8 bits (39), Expect = 5e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 559 acctggccgaggtccaccgccgggttcaggctctgcccgcagtcgtacaccaggtcgctc 618 |||||||| | |||||| || || |||||||||||||| ||||||||||| ||||||||| Sbjct: 99619 acctggcccaagtccacagcaggattcaggctctgcccacagtcgtacacgaggtcgctc 99678 Query: 619 cgcaggatcgtcgtcgctccggtcagcacgtctatttccacct 661 | |||||| || || |||| |||||||| || | |||||||| Sbjct: 99679 ctcaggatggtggtttctcccgtcagcacatcgacttccacct 99721
>gb|AY106434.1| Zea mays PCO077114 mRNA sequence Length = 2375 Score = 176 bits (89), Expect = 7e-41 Identities = 305/377 (80%) Strand = Plus / Minus Query: 286 gagaattccttcctggccgccctgatagcctcccgcatcgcgcagtgcaccgacgccgcc 345 ||||||||||||||||| || ||||| ||||||| ||| |||||||||||||| || || Sbjct: 2026 gagaattccttcctggcggctctgatggcctccctcattgcgcagtgcaccgaggcagct 1967 Query: 346 atcagcagcggcggctcgccggacgccttggaggagagcacccttttcttgtcgtgcgcg 405 | || ||||| ||||||||||| || ||||| ||||| || | |||| ||| | ||| Sbjct: 1966 agaagaagcggaggctcgccggatgctttggaagagaggacacgcttctggtcacgggcg 1907 Query: 406 ctggctatgagctccacgtttagctgcttggggatggtgtccaccgtggggatcttgtac 465 ||| || ||||| ||||| | |||||| ||||||||||| |||||||||||||||||| Sbjct: 1906 ctgttgatcagctcaacgttcaactgctttgggatggtgtcgaccgtggggatcttgtac 1847 Query: 466 gtccaggtgccgtcgttcaccaccagcccgtcggcgttcgtcgtgtactcctcgttcgtg 525 ||||| ||||| |||| | |||| ||| || | ||| || |||||||||||||| || Sbjct: 1846 gtccatgtgccatcgtggatgaccaacccctcagagtttgttgtgtactcctcgtttgta 1787 Query: 526 aagaacccaaccccttgcacgaatgcgccctccacctggccgaggtccaccgccgggttc 585 ||||| || || ||||| | ||||||||| ||||||||||| | ||| || || |||||| Sbjct: 1786 aagaagcctactccttggatgaatgcgccttccacctggcccaagtcgacagcagggttc 1727 Query: 586 aggctctgcccgcagtcgtacaccaggtcgctccgcaggatcgtcgtcgctccggtcagc 645 | ||| |||||||| ||||| || ||||| |||| || || || || ||||| |||||| Sbjct: 1726 aagctttgcccgcaatcgtagacaaggtcactccttagaattgttgttgctcctgtcagc 1667 Query: 646 acgtctatttccacctc 662 || || ||||||||||| Sbjct: 1666 acatcaatttccacctc 1650 Score = 63.9 bits (32), Expect = 7e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 214 aggccgcagagctccttgacgtcggccatggtggccggcacgtccatctggaacgt 269 ||||||||||||||||||||| || ||| || |||||||||||||||| |||||| Sbjct: 2113 aggccgcagagctccttgacgatgggcatcgtcgccggcacgtccatctcgaacgt 2058
>gb|AC090873.4| Oryza sativa chromosome 10 clone OSJNBa0029P06, complete sequence Length = 151533 Score = 159 bits (80), Expect = 2e-35 Identities = 134/152 (88%) Strand = Plus / Minus Query: 412 atgagctccacgtttagctgcttggggatggtgtccaccgtggggatcttgtacgtccag 471 |||||||| ||||| | |||||||||||||||||| || |||||||||||||||||||| Sbjct: 2833 atgagctcgacgttgaactgcttggggatggtgtctacggtggggatcttgtacgtccat 2774 Query: 472 gtgccgtcgttcaccaccagcccgtcggcgttcgtcgtgtactcctcgttcgtgaagaac 531 |||||||||| | |||||||| |||||||| |||| ||||||||||||||||||||| Sbjct: 2773 gtgccgtcgtggatgaccagcccatcggcgttggtcgcgtactcctcgttcgtgaagaag 2714 Query: 532 ccaaccccttgcacgaatgcgccctccacctg 563 || || ||||||||||| ||||| |||||||| Sbjct: 2713 cccacaccttgcacgaacgcgccttccacctg 2682 Score = 93.7 bits (47), Expect = 8e-16 Identities = 65/71 (91%) Strand = Plus / Minus Query: 301 gccgccctgatagcctcccgcatcgcgcagtgcaccgacgccgccatcagcagcggcggc 360 ||||||||||| ||||||| ||||||||||||||| |||| ||||| ||||||||||||| Sbjct: 3395 gccgccctgatcgcctccctcatcgcgcagtgcacggacgacgccagcagcagcggcggc 3336 Query: 361 tcgccggacgc 371 || |||||||| Sbjct: 3335 tcaccggacgc 3325 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 198 cctctcgatgacgtcgaggccgcagagctccttgacgtcggccatggtggccggcacgtc 257 |||||| | |||||||||||||||||||||||||||| | | ||| || ||||||||||| Sbjct: 3522 cctctccacgacgtcgaggccgcagagctccttgacggccggcatcgtcgccggcacgtc 3463 Query: 258 catctggaacg 268 ||||||||||| Sbjct: 3462 catctggaacg 3452 Score = 61.9 bits (31), Expect = 3e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 583 ttcaggctctgcccgcagtcgtacaccaggtcgctccgcaggatcgtcgtcgctccggtc 642 |||||||||||||| ||||| ||||| |||||||||| |||||| || || || || ||| Sbjct: 2290 ttcaggctctgcccacagtcatacacgaggtcgctcctcaggatggtggttgcccctgtc 2231 Query: 643 agcacgtctatttccacct 661 ||||| || | |||||||| Sbjct: 2230 agcacatcgacttccacct 2212
>gb|AC099733.2| Oryza sativa chromosome 10 clone OSJNAa0087H07, complete sequence Length = 132268 Score = 159 bits (80), Expect = 2e-35 Identities = 134/152 (88%) Strand = Plus / Minus Query: 412 atgagctccacgtttagctgcttggggatggtgtccaccgtggggatcttgtacgtccag 471 |||||||| ||||| | |||||||||||||||||| || |||||||||||||||||||| Sbjct: 75101 atgagctcgacgttgaactgcttggggatggtgtctacggtggggatcttgtacgtccat 75042 Query: 472 gtgccgtcgttcaccaccagcccgtcggcgttcgtcgtgtactcctcgttcgtgaagaac 531 |||||||||| | |||||||| |||||||| |||| ||||||||||||||||||||| Sbjct: 75041 gtgccgtcgtggatgaccagcccatcggcgttggtcgcgtactcctcgttcgtgaagaag 74982 Query: 532 ccaaccccttgcacgaatgcgccctccacctg 563 || || ||||||||||| ||||| |||||||| Sbjct: 74981 cccacaccttgcacgaacgcgccttccacctg 74950 Score = 93.7 bits (47), Expect = 8e-16 Identities = 65/71 (91%) Strand = Plus / Minus Query: 301 gccgccctgatagcctcccgcatcgcgcagtgcaccgacgccgccatcagcagcggcggc 360 ||||||||||| ||||||| ||||||||||||||| |||| ||||| ||||||||||||| Sbjct: 75663 gccgccctgatcgcctccctcatcgcgcagtgcacggacgacgccagcagcagcggcggc 75604 Query: 361 tcgccggacgc 371 || |||||||| Sbjct: 75603 tcaccggacgc 75593 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 198 cctctcgatgacgtcgaggccgcagagctccttgacgtcggccatggtggccggcacgtc 257 |||||| | |||||||||||||||||||||||||||| | | ||| || ||||||||||| Sbjct: 75790 cctctccacgacgtcgaggccgcagagctccttgacggccggcatcgtcgccggcacgtc 75731 Query: 258 catctggaacg 268 ||||||||||| Sbjct: 75730 catctggaacg 75720 Score = 61.9 bits (31), Expect = 3e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 583 ttcaggctctgcccgcagtcgtacaccaggtcgctccgcaggatcgtcgtcgctccggtc 642 |||||||||||||| ||||| ||||| |||||||||| |||||| || || || || ||| Sbjct: 74558 ttcaggctctgcccacagtcatacacgaggtcgctcctcaggatggtggttgcccctgtc 74499 Query: 643 agcacgtctatttccacct 661 ||||| || | |||||||| Sbjct: 74498 agcacatcgacttccacct 74480
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 159 bits (80), Expect = 2e-35 Identities = 134/152 (88%) Strand = Plus / Minus Query: 412 atgagctccacgtttagctgcttggggatggtgtccaccgtggggatcttgtacgtccag 471 |||||||| ||||| | |||||||||||||||||| || |||||||||||||||||||| Sbjct: 2346101 atgagctcgacgttgaactgcttggggatggtgtctacggtggggatcttgtacgtccat 2346042 Query: 472 gtgccgtcgttcaccaccagcccgtcggcgttcgtcgtgtactcctcgttcgtgaagaac 531 |||||||||| | |||||||| |||||||| |||| ||||||||||||||||||||| Sbjct: 2346041 gtgccgtcgtggatgaccagcccatcggcgttggtcgcgtactcctcgttcgtgaagaag 2345982 Query: 532 ccaaccccttgcacgaatgcgccctccacctg 563 || || ||||||||||| ||||| |||||||| Sbjct: 2345981 cccacaccttgcacgaacgcgccttccacctg 2345950 Score = 93.7 bits (47), Expect = 8e-16 Identities = 65/71 (91%) Strand = Plus / Minus Query: 301 gccgccctgatagcctcccgcatcgcgcagtgcaccgacgccgccatcagcagcggcggc 360 ||||||||||| ||||||| ||||||||||||||| |||| ||||| ||||||||||||| Sbjct: 2346663 gccgccctgatcgcctccctcatcgcgcagtgcacggacgacgccagcagcagcggcggc 2346604 Query: 361 tcgccggacgc 371 || |||||||| Sbjct: 2346603 tcaccggacgc 2346593 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 198 cctctcgatgacgtcgaggccgcagagctccttgacgtcggccatggtggccggcacgtc 257 |||||| | |||||||||||||||||||||||||||| | | ||| || ||||||||||| Sbjct: 2346790 cctctccacgacgtcgaggccgcagagctccttgacggccggcatcgtcgccggcacgtc 2346731 Query: 258 catctggaacg 268 ||||||||||| Sbjct: 2346730 catctggaacg 2346720 Score = 61.9 bits (31), Expect = 3e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 583 ttcaggctctgcccgcagtcgtacaccaggtcgctccgcaggatcgtcgtcgctccggtc 642 |||||||||||||| ||||| ||||| |||||||||| |||||| || || || || ||| Sbjct: 2345558 ttcaggctctgcccacagtcatacacgaggtcgctcctcaggatggtggttgcccctgtc 2345499 Query: 643 agcacgtctatttccacct 661 ||||| || | |||||||| Sbjct: 2345498 agcacatcgacttccacct 2345480 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 333 caccgacgccgccatcagcagc 354 |||||||||||||||||||||| Sbjct: 25553 caccgacgccgccatcagcagc 25532
>gb|AY109831.1| Zea mays CL1856_1 mRNA sequence Length = 4333 Score = 159 bits (80), Expect = 2e-35 Identities = 305/380 (80%) Strand = Plus / Minus Query: 286 gagaattccttcctggccgccctgatagcctcccgcatcgcgcagtgcaccgacgccgcc 345 |||||||| |||||||| |||||||| ||||||| ||| ||||||||||| || | || Sbjct: 3986 gagaattctttcctggcggccctgatggcctccctcattgcgcagtgcacagaggaagct 3927 Query: 346 atcagcagcggcggctcgccggacgccttggaggagagcacccttttcttgtcgtgcgcg 405 | || ||||| ||||||||||| || ||||| ||||| || | |||| ||| | ||| Sbjct: 3926 agaagaagcggaggctcgccggatgctttggaagagaggacacgcttctggtcacgggcg 3867 Query: 406 ctggctatgagctccacgtttagctgcttggggatggtgtccaccgtggggatcttgtac 465 ||| || ||||| ||||| | |||||| ||||||||||| |||||||||||||||||| Sbjct: 3866 ctgttgatcagctcaacgttcaactgctttgggatggtgtcgaccgtggggatcttgtac 3807 Query: 466 gtccaggtgccgtcgttcaccaccagcccgtcggcgttcgtcgtgtactcctcgttcgtg 525 ||||| ||||| |||| | |||| |||||| | ||| || | |||||||||||| || Sbjct: 3806 gtccatgtgccatcgtggatgaccaacccgtcagagttggttgcgtactcctcgtttgta 3747 Query: 526 aagaacccaaccccttgcacgaatgcgccctccacctggccgaggtccaccgccgggttc 585 ||||| || || ||||| ||||||||||| |||||||| || | ||| || || |||||| Sbjct: 3746 aagaagcctactccttgtacgaatgcgccttccacctgccccaagtcgacagcagggttc 3687 Query: 586 aggctctgcccgcagtcgtacaccaggtcgctccgcaggatcgtcgtcgctccggtcagc 645 | ||| |||||||| ||||| || ||||| |||| || || || || ||||| ||||| Sbjct: 3686 aagctttgcccgcaatcgtagacaaggtcactccttagaattgttgttgctcctgtcagg 3627 Query: 646 acgtctatttccacctcgct 665 || || |||||||||||||| Sbjct: 3626 acatcaatttccacctcgct 3607 Score = 73.8 bits (37), Expect = 7e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 193 aggtgcctctcgatgacgtcgaggccgcagagctccttgacgtcggccatggtggccggc 252 |||| |||||| | ||| || ||||||||||||||||||||| | | ||| || |||||| Sbjct: 4094 aggtacctctcaacgacatccaggccgcagagctccttgacgacaggcatcgttgccggc 4035 Query: 253 acgtccatctggaacgt 269 ||||||||||||||||| Sbjct: 4034 acgtccatctggaacgt 4018
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 159 bits (80), Expect = 2e-35 Identities = 134/152 (88%) Strand = Plus / Minus Query: 412 atgagctccacgtttagctgcttggggatggtgtccaccgtggggatcttgtacgtccag 471 |||||||| ||||| | |||||||||||||||||| || |||||||||||||||||||| Sbjct: 2346052 atgagctcgacgttgaactgcttggggatggtgtctacggtggggatcttgtacgtccat 2345993 Query: 472 gtgccgtcgttcaccaccagcccgtcggcgttcgtcgtgtactcctcgttcgtgaagaac 531 |||||||||| | |||||||| |||||||| |||| ||||||||||||||||||||| Sbjct: 2345992 gtgccgtcgtggatgaccagcccatcggcgttggtcgcgtactcctcgttcgtgaagaag 2345933 Query: 532 ccaaccccttgcacgaatgcgccctccacctg 563 || || ||||||||||| ||||| |||||||| Sbjct: 2345932 cccacaccttgcacgaacgcgccttccacctg 2345901 Score = 93.7 bits (47), Expect = 8e-16 Identities = 65/71 (91%) Strand = Plus / Minus Query: 301 gccgccctgatagcctcccgcatcgcgcagtgcaccgacgccgccatcagcagcggcggc 360 ||||||||||| ||||||| ||||||||||||||| |||| ||||| ||||||||||||| Sbjct: 2346614 gccgccctgatcgcctccctcatcgcgcagtgcacggacgacgccagcagcagcggcggc 2346555 Query: 361 tcgccggacgc 371 || |||||||| Sbjct: 2346554 tcaccggacgc 2346544 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 198 cctctcgatgacgtcgaggccgcagagctccttgacgtcggccatggtggccggcacgtc 257 |||||| | |||||||||||||||||||||||||||| | | ||| || ||||||||||| Sbjct: 2346741 cctctccacgacgtcgaggccgcagagctccttgacggccggcatcgtcgccggcacgtc 2346682 Query: 258 catctggaacg 268 ||||||||||| Sbjct: 2346681 catctggaacg 2346671 Score = 61.9 bits (31), Expect = 3e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 583 ttcaggctctgcccgcagtcgtacaccaggtcgctccgcaggatcgtcgtcgctccggtc 642 |||||||||||||| ||||| ||||| |||||||||| |||||| || || || || ||| Sbjct: 2345509 ttcaggctctgcccacagtcatacacgaggtcgctcctcaggatggtggttgcccctgtc 2345450 Query: 643 agcacgtctatttccacct 661 ||||| || | |||||||| Sbjct: 2345449 agcacatcgacttccacct 2345431 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 333 caccgacgccgccatcagcagc 354 |||||||||||||||||||||| Sbjct: 25553 caccgacgccgccatcagcagc 25532
>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete sequence Length = 162497 Score = 157 bits (79), Expect = 6e-35 Identities = 133/151 (88%) Strand = Plus / Minus Query: 412 atgagctccacgtttagctgcttggggatggtgtccaccgtggggatcttgtacgtccag 471 |||||||| ||||| | ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 149586 atgagctcgacgttgaactgcttggggatggtgtccacggtggggatcttgtacgtccac 149527 Query: 472 gtgccgtcgttcaccaccagcccgtcggcgttcgtcgtgtactcctcgttcgtgaagaac 531 |||| ||||| | |||||||| |||| ||| |||| ||||||||||||||||||||| Sbjct: 149526 gtgctgtcgtggatgaccagcccatcggagttggtcgcgtactcctcgttcgtgaagaag 149467 Query: 532 ccaaccccttgcacgaatgcgccctccacct 562 || | |||||||||||||||||| ||||||| Sbjct: 149466 ccgatcccttgcacgaatgcgccttccacct 149436 Score = 123 bits (62), Expect = 9e-25 Identities = 146/174 (83%), Gaps = 10/174 (5%) Strand = Plus / Minus Query: 198 cctctcgatgacgtcgaggccgcagagctccttgacgtcggccatggtggccggcacgtc 257 |||||||| |||||||||||||||||||||||||||| | | ||| || ||||||||||| Sbjct: 149916 cctctcgacgacgtcgaggccgcagagctccttgacggccggcatcgtcgccggcacgtc 149857 Query: 258 catctggaacgtcagcggcgagc------tggcggagaattccttcctggccgccc---- 307 ||||||||| |||| || ||||| | ||| ||| |||||||||||||||| Sbjct: 149856 catctggaaagtcatcgccgagccgccggcgccggcgaactccttcctggccgccctgat 149797 Query: 308 tgatagcctcccgcatcgcgcagtgcaccgacgccgccatcagcagcggcggct 361 |||| ||||||| |||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 149796 tgatcgcctccctcatcgcgcagtgcaccgacgacgccagcagcggcggcggct 149743
>dbj|D88452.1| Zea mays mRNA for aldehyde oxidase-2, complete cds Length = 4333 Score = 143 bits (72), Expect = 9e-31 Identities = 303/380 (79%) Strand = Plus / Minus Query: 286 gagaattccttcctggccgccctgatagcctcccgcatcgcgcagtgcaccgacgccgcc 345 |||||||| |||||||| |||||||| ||||||| ||| ||||||||||| || | || Sbjct: 3986 gagaattctttcctggcggccctgatggcctccctcattgcgcagtgcacagaggaagct 3927 Query: 346 atcagcagcggcggctcgccggacgccttggaggagagcacccttttcttgtcgtgcgcg 405 | || ||||| |||||||| || || ||||| ||||| || | |||| ||| | ||| Sbjct: 3926 aggagaagcggaggctcgcccgatgctttggaagagaggacgcgcttctggtcacgggcg 3867 Query: 406 ctggctatgagctccacgtttagctgcttggggatggtgtccaccgtggggatcttgtac 465 ||| || ||||| ||||| | |||||| ||||||||||| |||||||||||||||||| Sbjct: 3866 ctgttgatcagctcaacgttgaactgctttgggatggtgtcgaccgtggggatcttgtac 3807 Query: 466 gtccaggtgccgtcgttcaccaccagcccgtcggcgttcgtcgtgtactcctcgttcgtg 525 ||||| ||||| |||| | |||| |||||| | ||| || | |||||||||||| ||| Sbjct: 3806 gtccatgtgccatcgtggatgaccaacccgtcagagttggttgcgtactcctcgtttgtg 3747 Query: 526 aagaacccaaccccttgcacgaatgcgccctccacctggccgaggtccaccgccgggttc 585 ||||| || || ||||| |||||||| || |||||||| || | || || || |||||| Sbjct: 3746 aagaagcctactccttgtacgaatgcaccttccacctgccccaaatcgacagcagggttc 3687 Query: 586 aggctctgcccgcagtcgtacaccaggtcgctccgcaggatcgtcgtcgctccggtcagc 645 | ||| |||||||| ||||| || ||||| |||| || || || || ||||| ||||| Sbjct: 3686 aagctttgcccgcaatcgtagacaaggtcactccttagaattgttgttgctcctgtcagg 3627 Query: 646 acgtctatttccacctcgct 665 || || |||||||||||||| Sbjct: 3626 acatcaatttccacctcgct 3607 Score = 73.8 bits (37), Expect = 7e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 193 aggtgcctctcgatgacgtcgaggccgcagagctccttgacgtcggccatggtggccggc 252 |||| |||||| | ||| || ||||||||||||||||||||| | | ||| || |||||| Sbjct: 4094 aggtacctctcaacgacatccaggccgcagagctccttgacgacaggcatcgttgccggc 4035 Query: 253 acgtccatctggaacgt 269 ||||||||||||||||| Sbjct: 4034 acgtccatctggaacgt 4018
>gb|AY109832.1| Zea mays CL1856_2 mRNA sequence Length = 4402 Score = 133 bits (67), Expect = 9e-28 Identities = 151/179 (84%) Strand = Plus / Minus Query: 445 tccaccgtggggatcttgtacgtccaggtgccgtcgttcaccaccagcccgtcggcgttc 504 |||||||||||||||||||||||||| |||||||||| | |||| |||||||| ||| Sbjct: 3806 tccaccgtggggatcttgtacgtccatgtgccgtcgtggatgaccaacccgtcggaattc 3747 Query: 505 gtcgtgtactcctcgttcgtgaagaacccaaccccttgcacgaatgcgccctccacctgg 564 ||| |||| |||||||||||||||||||| | ||||| || || |||||| | |||| Sbjct: 3746 gtcttgtagtcctcgttcgtgaagaaccctattccttggacaaagcagccctcgatctgg 3687 Query: 565 ccgaggtccaccgccgggttcaggctctgcccgcagtcgtacaccaggtcgctccgcag 623 || | ||| || || ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 3686 cccaagtctacagcagggtttaggctctgcccgcagtcatacaccaggtcgcttcgcag 3628 Score = 85.7 bits (43), Expect = 2e-13 Identities = 67/75 (89%) Strand = Plus / Minus Query: 192 gaggtgcctctcgatgacgtcgaggccgcagagctccttgacgtcggccatggtggccgg 251 ||||| |||||| | |||||||||||||||||||||||||||| | | ||| || ||||| Sbjct: 4074 gaggtacctctccacgacgtcgaggccgcagagctccttgacgacaggcatcgtcgccgg 4015 Query: 252 cacgtccatctggaa 266 ||||||||||||||| Sbjct: 4014 cacgtccatctggaa 4000 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Minus Query: 286 gagaattccttcctggccgccctgatagcctcccgcatcgcgcagtgcaccgacgccgcc 345 ||||| |||||||| ||||||||||| ||||||| |||||||||||||||||| | || Sbjct: 3965 gagaactccttcctcgccgccctgatggcctccctcatcgcgcagtgcaccgaggttgcg 3906 Query: 346 atcagcagcggcggctcgccggacgccttgga 377 | | ||||||||||||||| ||||| ||||| Sbjct: 3905 agaaccagcggcggctcgcccgacgctttgga 3874
>dbj|D88451.1| Zea mays mRNA for aldehyde oxidase, complete cds Length = 4382 Score = 133 bits (67), Expect = 9e-28 Identities = 151/179 (84%) Strand = Plus / Minus Query: 445 tccaccgtggggatcttgtacgtccaggtgccgtcgttcaccaccagcccgtcggcgttc 504 |||||||||||||||||||||||||| |||||||||| | |||| |||||||| ||| Sbjct: 3806 tccaccgtggggatcttgtacgtccatgtgccgtcgtggatgaccaacccgtcggaattc 3747 Query: 505 gtcgtgtactcctcgttcgtgaagaacccaaccccttgcacgaatgcgccctccacctgg 564 ||| |||| |||||||||||||||||||| | ||||| || || |||||| | |||| Sbjct: 3746 gtcttgtagtcctcgttcgtgaagaaccctattccttggacaaagcagccctcgatctgg 3687 Query: 565 ccgaggtccaccgccgggttcaggctctgcccgcagtcgtacaccaggtcgctccgcag 623 || | ||| || || ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 3686 cccaagtctacagcagggtttaggctctgcccgcagtcatacaccaggtcgcttcgcag 3628 Score = 85.7 bits (43), Expect = 2e-13 Identities = 67/75 (89%) Strand = Plus / Minus Query: 192 gaggtgcctctcgatgacgtcgaggccgcagagctccttgacgtcggccatggtggccgg 251 ||||| |||||| | |||||||||||||||||||||||||||| | | ||| || ||||| Sbjct: 4074 gaggtacctctccacgacgtcgaggccgcagagctccttgacgacaggcatcgtcgccgg 4015 Query: 252 cacgtccatctggaa 266 ||||||||||||||| Sbjct: 4014 cacgtccatctggaa 4000 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Minus Query: 286 gagaattccttcctggccgccctgatagcctcccgcatcgcgcagtgcaccgacgccgcc 345 ||||| |||||||| ||||||||||| ||||||| |||||||||||||||||| | || Sbjct: 3965 gagaactccttcctcgccgccctgatggcctccctcatcgcgcagtgcaccgaggttgcg 3906 Query: 346 atcagcagcggcggctcgccggacgccttgga 377 | | ||||||||||||||| ||||| ||||| Sbjct: 3905 agaaccagcggcggctcgcccgacgctttgga 3874
>ref|NM_185058.1| Oryza sativa (japonica cultivar-group), mRNA Length = 249 Score = 107 bits (54), Expect = 5e-20 Identities = 132/158 (83%) Strand = Plus / Minus Query: 292 tccttcctggccgccctgatagcctcccgcatcgcgcagtgcaccgacgccgccatcagc 351 ||||||| |||||||||||| ||||||| |||||||||||||||||||| ||||| |||| Sbjct: 188 tccttccgggccgccctgatcgcctccctcatcgcgcagtgcaccgacgacgccagcagc 129 Query: 352 agcggcggctcgccggacgccttggaggagagcacccttttcttgtcgtgcgcgctggct 411 |||||||||| |||||||| ||||| || || || | || | ||| | |||||| Sbjct: 128 ggcggcggctcaccggacgctttggaagataggacgcgcttgtgatcgcgggcgctgttg 69 Query: 412 atgagctccacgtttagctgcttggggatggtgtccac 449 |||||||| ||||| | ||||||| ||||||||||||| Sbjct: 68 atgagctcgacgttgaactgcttgaggatggtgtccac 31
>gb|AC159612.1| Zea mays chromosome 5S clone ZMMBBb0511I12 map bin: 5.00, complete sequence Length = 50000 Score = 105 bits (53), Expect = 2e-19 Identities = 125/149 (83%) Strand = Plus / Plus Query: 415 agctccacgtttagctgcttggggatggtgtccaccgtggggatcttgtacgtccaggtg 474 ||||| ||||| | |||||| ||||||||||| ||||||||||||||||||||||| ||| Sbjct: 22112 agctcaacgttgaactgctttgggatggtgtcgaccgtggggatcttgtacgtccatgtg 22171 Query: 475 ccgtcgttcaccaccagcccgtcggcgttcgtcgtgtactcctcgttcgtgaagaaccca 534 || |||| | |||| |||||| | ||| || | |||||||||||| |||||||| || Sbjct: 22172 ccatcgtggatgaccaacccgtcagagttggttgcgtactcctcgtttgtgaagaagcct 22231 Query: 535 accccttgcacgaatgcgccctccacctg 563 || ||||| |||||||| || |||||||| Sbjct: 22232 actccttggacgaatgcaccttccacctg 22260 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 286 gagaattccttcctggccgccctgatagcctcccgcatcgcgcagtgcac 335 ||||||||||||||||| |||||||| ||||||| ||| ||||||||||| Sbjct: 21875 gagaattccttcctggcggccctgatggcctccctcattgcgcagtgcac 21924 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 193 aggtgcctctcgatgacgtcgaggccgcagagctccttgacgtcggccatggtggccggc 252 |||| |||||| | ||| || ||||||||||||||||||||| | | ||| || || ||| Sbjct: 21767 aggtacctctccacgacatccaggccgcagagctccttgacgacaggcatcgttgcgggc 21826 Query: 253 acgtccatctggaacgt 269 ||||||||||||||||| Sbjct: 21827 acgtccatctggaacgt 21843
>gb|AC093713.6| Oryza sativa chromosome 3 BAC OSJNBa0094F01 genomic sequence, complete sequence Length = 151479 Score = 103 bits (52), Expect = 8e-19 Identities = 73/80 (91%) Strand = Plus / Minus Query: 292 tccttcctggccgccctgatagcctcccgcatcgcgcagtgcaccgacgccgccatcagc 351 ||||||| |||||||||||| ||||||| |||||||||||||||||||| ||||| |||| Sbjct: 37948 tccttccgggccgccctgatcgcctccctcatcgcgcagtgcaccgacgacgccagcagc 37889 Query: 352 agcggcggctcgccggacgc 371 |||||||||| |||||||| Sbjct: 37888 ggcggcggctcaccggacgc 37869 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 487 accagcccgtcggcgttcgtcgtgtactcctcgttcgtgaagaacccaaccccttgcacg 546 |||||||| |||| ||| |||| |||||| || ||||||||||| || | |||||||||| Sbjct: 37598 accagcccatcggagttggtcgcgtactcatcattcgtgaagaagccgatcccttgcacg 37539 Query: 547 aatgcgcc 554 || ||||| Sbjct: 37538 aacgcgcc 37531 Score = 44.1 bits (22), Expect = 0.63 Identities = 34/38 (89%) Strand = Plus / Minus Query: 412 atgagctccacgtttagctgcttggggatggtgtccac 449 |||||||| ||||| | ||||||| ||||||||||||| Sbjct: 37656 atgagctcgacgttgaactgcttgaggatggtgtccac 37619
>ref|XM_476717.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4245 Score = 48.1 bits (24), Expect = 0.040 Identities = 75/92 (81%) Strand = Plus / Minus Query: 436 gggatggtgtccaccgtggggatcttgtacgtccaggtgccgtcgttcaccaccagcccg 495 ||||||||||||||||| || |||||||| ||||| || ||||| || | |||||| Sbjct: 3968 gggatggtgtccaccgtaggaatcttgtatgtccaagtcccgtctgagacaagcagccca 3909 Query: 496 tcggcgttcgtcgtgtactcctcgttcgtgaa 527 || | ||||||| ||||||||||||| |||| Sbjct: 3908 tctgagttcgtcacgtactcctcgttcatgaa 3877
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 48.1 bits (24), Expect = 0.040 Identities = 75/92 (81%) Strand = Plus / Plus Query: 436 gggatggtgtccaccgtggggatcttgtacgtccaggtgccgtcgttcaccaccagcccg 495 ||||||||||||||||| || |||||||| ||||| || ||||| || | |||||| Sbjct: 3504907 gggatggtgtccaccgtaggaatcttgtatgtccaagtcccgtctgagacaagcagccca 3504966 Query: 496 tcggcgttcgtcgtgtactcctcgttcgtgaa 527 || | ||||||| ||||||||||||| |||| Sbjct: 3504967 tctgagttcgtcacgtactcctcgttcatgaa 3504998
>dbj|AP004267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0039H02 Length = 169162 Score = 48.1 bits (24), Expect = 0.040 Identities = 75/92 (81%) Strand = Plus / Plus Query: 436 gggatggtgtccaccgtggggatcttgtacgtccaggtgccgtcgttcaccaccagcccg 495 ||||||||||||||||| || |||||||| ||||| || ||||| || | |||||| Sbjct: 42857 gggatggtgtccaccgtaggaatcttgtatgtccaagtcccgtctgagacaagcagccca 42916 Query: 496 tcggcgttcgtcgtgtactcctcgttcgtgaa 527 || | ||||||| ||||||||||||| |||| Sbjct: 42917 tctgagttcgtcacgtactcctcgttcatgaa 42948
>dbj|AK122123.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033131J21, full insert sequence Length = 2663 Score = 48.1 bits (24), Expect = 0.040 Identities = 75/92 (81%) Strand = Plus / Minus Query: 436 gggatggtgtccaccgtggggatcttgtacgtccaggtgccgtcgttcaccaccagcccg 495 ||||||||||||||||| || |||||||| ||||| || ||||| || | |||||| Sbjct: 2108 gggatggtgtccaccgtaggaatcttgtatgtccaagtcccgtctgagacaagcagccca 2049 Query: 496 tcggcgttcgtcgtgtactcctcgttcgtgaa 527 || | ||||||| ||||||||||||| |||| Sbjct: 2048 tctgagttcgtcacgtactcctcgttcatgaa 2017
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 348 cagcagcggcggctcgccggacgcctt 374 |||||||||||||||||||| |||||| Sbjct: 647738 cagcagcggcggctcgccggtcgcctt 647712
>ref|NM_194470.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0046L02.2), mRNA Length = 615 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 333 caccgacgccgccatcagcagc 354 |||||||||||||||||||||| Sbjct: 179 caccgacgccgccatcagcagc 200
>gb|AC079632.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0046L02, complete sequence Length = 142381 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 333 caccgacgccgccatcagcagc 354 |||||||||||||||||||||| Sbjct: 11449 caccgacgccgccatcagcagc 11428
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 332 gcaccgacgccgccatcagcag 353 |||||||||||||||||||||| Sbjct: 964183 gcaccgacgccgccatcagcag 964204 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 tgacggcggtgacggcggtg 159 |||||||||||||||||||| Sbjct: 1106864 tgacggcggtgacggcggtg 1106845
>emb|Z34263.1|MBPGRSR M.bovis (9598) PGRS repeat region Length = 756 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 142 acggcggtgacggcggtgttgg 163 |||||||||||||||||||||| Sbjct: 254 acggcggtgacggcggtgttgg 233
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 333 caccgacgccgccatcagcagc 354 |||||||||||||||||||||| Sbjct: 25553 caccgacgccgccatcagcagc 25532
>gb|AC166065.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJA1136E01, complete sequence Length = 105139 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 333 caccgacgccgccatcagcagc 354 |||||||||||||||||||||| Sbjct: 30692 caccgacgccgccatcagcagc 30671
>gb|AC108883.1| Genomic sequence for (japonica cultivar-group) cultivar Nipponbare clone OJ1136E01, from chromosome 10, complete sequence Length = 113856 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 333 caccgacgccgccatcagcagc 354 |||||||||||||||||||||| Sbjct: 88304 caccgacgccgccatcagcagc 88325
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 166 ccggcggcggcagaggagaggc 187 |||||||||||||||||||||| Sbjct: 4631290 ccggcggcggcagaggagaggc 4631311
>dbj|AK104934.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-D05, full insert sequence Length = 1681 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 333 caccgacgccgccatcagcagc 354 |||||||||||||||||||||| Sbjct: 1278 caccgacgccgccatcagcagc 1299
>dbj|AK065110.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001O01, full insert sequence Length = 1702 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 333 caccgacgccgccatcagcagc 354 |||||||||||||||||||||| Sbjct: 1296 caccgacgccgccatcagcagc 1317
>gb|BT016978.1| Zea mays clone EK07D2303G05.c mRNA sequence Length = 821 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 222 gagctccttgacgtcggccatggtggccg 250 ||||||||||||||||||| |||||||| Sbjct: 584 gagctccttgacgtcggccggggtggccg 612
>gb|BT016317.1| Zea mays clone Contig150 mRNA sequence Length = 925 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 gagctccttgacgtcggccatggtggccg 250 ||||||||||||||||||| |||||||| Sbjct: 298 gagctccttgacgtcggccggggtggccg 270
>gb|AC137002.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBb0061M13, complete sequence Length = 174910 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 141 gacggcggtgacggcggtgttggga 165 |||||||||||| |||||||||||| Sbjct: 121643 gacggcggtgacagcggtgttggga 121619
>ref|XM_677355.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN9178.2), mRNA Length = 4053 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 537 cccttgcacgaatgcgccctc 557 ||||||||||||||||||||| Sbjct: 3708 cccttgcacgaatgcgccctc 3688
>gb|DQ471183.1| Camarops microspora isolate AFTOL-ID 1361 RNA polymerase II subunit 1 (RPB1) gene, partial sequence Length = 1184 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 ttgacggcggtgacggcggtg 159 ||||||||||||||||||||| Sbjct: 298 ttgacggcggtgacggcggtg 318
>ref|XM_533104.2| PREDICTED: Canis familiaris similar to Mitochondrial processing peptidase beta subunit, mitochondrial precursor (Beta-MPP) (P-52) (LOC475897), mRNA Length = 1650 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 140 tgacggcggtgacggcggtgt 160 ||||||||||||||||||||| Sbjct: 16 tgacggcggtgacggcggtgt 36
>emb|AJ001013.2|RCXDHAB Rhodobacter capsulatus dnaE and xdhA and B genes Length = 4388 Score = 42.1 bits (21), Expect = 2.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 550 gcgccctccacctggccgaggtccaccgccgggttcaggct 590 |||||||| | |||||||| |||| ||||||||||||||| Sbjct: 3896 gcgccctcgatctggccgatatccagcgccgggttcaggct 3856
>gb|AC151612.2| Emiliania huxleyi clone JGIACCU-13I1, complete sequence Length = 35427 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 339 cgccgccatcagcagcggcggctcg 363 ||||||||||||||||| ||||||| Sbjct: 22946 cgccgccatcagcagcgccggctcg 22970
>gb|S59777.1| HSP18=18 kda heat shock protein {microsporogenesis-specific} [Zea mays, Oh43, clone cMHSP18-1, mRNA, 790 nt] Length = 790 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 222 gagctccttgacgtcggccatggtggccg 250 ||||||||||||||||||| |||||||| Sbjct: 217 gagctccttgacgtcggccggggtggccg 189
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 481 ttcaccaccagcccgtcggcg 501 ||||||||||||||||||||| Sbjct: 814761 ttcaccaccagcccgtcggcg 814781 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 ctggccgccctgatagcctc 317 |||||||||||||||||||| Sbjct: 1440614 ctggccgccctgatagcctc 1440595
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 141 gacggcggtgacggcggtgttggga 165 |||||||||||| |||||||||||| Sbjct: 10952439 gacggcggtgacagcggtgttggga 10952415
>gb|AF235504.1|AF235504 Streptomyces hygroscopicus var. ascomyceticus FK520 biosynthetic gene cluster, partial sequence Length = 77534 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 483 caccaccagcccgtcggcgttcgtcgtgt 511 |||| |||||||||| ||||||||||||| Sbjct: 47213 cacctccagcccgtccgcgttcgtcgtgt 47185
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 484 accaccagcccgtcggcgttc 504 ||||||||||||||||||||| Sbjct: 3299718 accaccagcccgtcggcgttc 3299698
>ref|NM_180718.1| Arabidopsis thaliana AAO1 (ALDEHYDE OXIDASE 1) AT5G20960 (AAO1) transcript variant AT5G20960.1 mRNA, complete cds Length = 4484 Score = 40.1 bits (20), Expect = 9.8 Identities = 35/40 (87%) Strand = Plus / Minus Query: 436 gggatggtgtccaccgtggggatcttgtacgtccaggtgc 475 ||||| ||||| ||||| ||||||||||| ||||| |||| Sbjct: 3857 gggattgtgtcaaccgttgggatcttgtaagtccatgtgc 3818
>ref|NM_122105.2| Arabidopsis thaliana AAO1 (ALDEHYDE OXIDASE 1) AT5G20960 (AAO1) transcript variant AT5G20960.2 mRNA, complete cds Length = 4426 Score = 40.1 bits (20), Expect = 9.8 Identities = 35/40 (87%) Strand = Plus / Minus Query: 436 gggatggtgtccaccgtggggatcttgtacgtccaggtgc 475 ||||| ||||| ||||| ||||||||||| ||||| |||| Sbjct: 3857 gggattgtgtcaaccgttgggatcttgtaagtccatgtgc 3818
>gb|AC163617.5| Mus musculus BAC clone RP23-115O21 from chromosome 8, complete sequence Length = 224322 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 tgggaccggcggcggcagag 180 |||||||||||||||||||| Sbjct: 149329 tgggaccggcggcggcagag 149348
>gb|AY255690.1| Nyctidromus albicollis arylalkylamine N-acetyltransferase gene, partial cds Length = 1676 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 aggctctggaggtgcctctc 203 |||||||||||||||||||| Sbjct: 602 aggctctggaggtgcctctc 583
>gb|AC119884.13| Mus musculus chromosome 15, clone RP24-213O5, complete sequence Length = 168400 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 ggagaggctctggaggtgcc 199 |||||||||||||||||||| Sbjct: 84164 ggagaggctctggaggtgcc 84183
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 tgacggcggtgacggcggtg 159 |||||||||||||||||||| Sbjct: 3729464 tgacggcggtgacggcggtg 3729445 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggcggtgacggcggtgttgg 163 |||||||||||||||||||| Sbjct: 363019 ggcggtgacggcggtgttgg 363038
>gb|AY658572.1| Synthetic construct Peudomonas aeruginosa clone FLH035005.01F PA5091 gene, partial cds Length = 801 Score = 40.1 bits (20), Expect = 9.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 554 cctccacctggccgaggtccaccgccgggttcaggc 589 |||||||| ||||| ||||||||||||| |||||| Sbjct: 106 cctccaccaggccggcgtccaccgccggggtcaggc 71
>gb|AC121819.3| Mus musculus BAC clone RP23-460F21 from chromosome 8, complete sequence Length = 194109 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 tgggaccggcggcggcagag 180 |||||||||||||||||||| Sbjct: 151088 tgggaccggcggcggcagag 151069
>gb|AC132233.4| Mus musculus BAC clone RP24-490D10 from chromosome 5, complete sequence Length = 160438 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 tacatgcatgcaagtatcat 132 |||||||||||||||||||| Sbjct: 106074 tacatgcatgcaagtatcat 106055
>ref|XM_805350.1| Trypanosoma cruzi strain CL Brener protein kinase (Tc00.1047053504047.60) partial mRNA Length = 1344 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 149 tgacggcggtgttgggaccggcggcggc 176 |||||| ||||||||||| ||||||||| Sbjct: 120 tgacgggggtgttgggacaggcggcggc 147
>gb|AC004870.2| Homo sapiens PAC clone RP4-739M23 from 7, complete sequence Length = 144546 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 tacataattacatgcatgca 124 |||||||||||||||||||| Sbjct: 58114 tacataattacatgcatgca 58133
>emb|AL672223.3| Human DNA sequence from clone RP11-431O5 on chromosome 13, complete sequence Length = 18334 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 caagtatcatcatgccttga 142 |||||||||||||||||||| Sbjct: 6157 caagtatcatcatgccttga 6138
>ref|XM_795256.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC585658 (LOC585658), mRNA Length = 1323 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 tgacggcggtgacggcggtg 159 |||||||||||||||||||| Sbjct: 345 tgacggcggtgacggcggtg 364
>gb|AE008704.1| Salmonella typhimurium LT2, section 12 of 220 of the complete genome Length = 19971 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 gcaccgacgccgccatcagc 351 |||||||||||||||||||| Sbjct: 2741 gcaccgacgccgccatcagc 2722
>emb|BX842582.1| Mycobacterium tuberculosis H37Rv complete genome; segment 11/13 Length = 349563 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 tgacggcggtgacggcggtg 159 |||||||||||||||||||| Sbjct: 269477 tgacggcggtgacggcggtg 269458
>emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome; segment 2/13 Length = 342416 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggcggtgacggcggtgttgg 163 |||||||||||||||||||| Sbjct: 21050 ggcggtgacggcggtgttgg 21069
>emb|BX248335.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 2/14 Length = 324050 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggcggtgacggcggtgttgg 163 |||||||||||||||||||| Sbjct: 21004 ggcggtgacggcggtgttgg 21023
>emb|BX248345.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 12/14 Length = 308050 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 tgacggcggtgacggcggtg 159 |||||||||||||||||||| Sbjct: 247835 tgacggcggtgacggcggtg 247816
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 40.1 bits (20), Expect = 9.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 544 acgaatgcgccctccacctggccgaggtccaccgccgggttcag 587 ||||| || ||||| ||||| |||||||| | |||||||||||| Sbjct: 864349 acgaaggcaccctcgacctgaccgaggtcgagcgccgggttcag 864306
>emb|AL627265.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 1/20 Length = 251050 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 gcaccgacgccgccatcagc 351 |||||||||||||||||||| Sbjct: 236875 gcaccgacgccgccatcagc 236856
>gb|AE012518.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 426 of 460 of the complete genome Length = 10619 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 cgccgccatcagcagcggcg 358 |||||||||||||||||||| Sbjct: 7940 cgccgccatcagcagcggcg 7921
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 ggtgccgtcgttcaccacca 490 |||||||||||||||||||| Sbjct: 4340250 ggtgccgtcgttcaccacca 4340269
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 tgacggcggtgacggcggtg 159 |||||||||||||||||||| Sbjct: 3636148 tgacggcggtgacggcggtg 3636129 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 tgacggcggtgacggcggtg 159 |||||||||||||||||||| Sbjct: 3636139 tgacggcggtgacggcggtg 3636120 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 tgacggcggtgacggcggtg 159 |||||||||||||||||||| Sbjct: 2602829 tgacggcggtgacggcggtg 2602848
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 cgccgccatcagcagcggcg 358 |||||||||||||||||||| Sbjct: 4790444 cgccgccatcagcagcggcg 4790425
>gb|AE004922.1| Pseudomonas aeruginosa PAO1, section 483 of 529 of the complete genome Length = 11099 Score = 40.1 bits (20), Expect = 9.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 554 cctccacctggccgaggtccaccgccgggttcaggc 589 |||||||| ||||| ||||||||||||| |||||| Sbjct: 861 cctccaccaggccggcgtccaccgccggggtcaggc 896
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 cgtcggccatggtggccggc 252 |||||||||||||||||||| Sbjct: 3831989 cgtcggccatggtggccggc 3831970
>gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1 Length = 96102 Score = 40.1 bits (20), Expect = 9.8 Identities = 35/40 (87%) Strand = Plus / Minus Query: 436 gggatggtgtccaccgtggggatcttgtacgtccaggtgc 475 ||||| ||||| ||||| ||||||||||| ||||| |||| Sbjct: 65642 gggattgtgtcaaccgttgggatcttgtaagtccatgtgc 65603
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 gcaccgacgccgccatcagc 351 |||||||||||||||||||| Sbjct: 244139 gcaccgacgccgccatcagc 244120
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 tgacggcggtgacggcggtg 159 |||||||||||||||||||| Sbjct: 621288 tgacggcggtgacggcggtg 621307
>emb|AL773518.3| Mouse DNA sequence from clone RP24-231F12 on chromosome 4, complete sequence Length = 205765 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 ggcagaggagaggctctgga 193 |||||||||||||||||||| Sbjct: 103178 ggcagaggagaggctctgga 103197
>dbj|AB005804.1| Arabidopsis thaliana AAO1 mRNA for aldehyde oxidase, complete cds Length = 4484 Score = 40.1 bits (20), Expect = 9.8 Identities = 35/40 (87%) Strand = Plus / Minus Query: 436 gggatggtgtccaccgtggggatcttgtacgtccaggtgc 475 ||||| ||||| ||||| ||||||||||| ||||| |||| Sbjct: 3857 gggattgtgtcaaccgttgggatcttgtaagtccatgtgc 3818
>gb|AF144050.1|AF144050 Streptomyces kanamyceticus macrolide type polyketide synthase gene, partial cds Length = 731 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 gacgtcggccatggtggccg 250 |||||||||||||||||||| Sbjct: 195 gacgtcggccatggtggccg 176
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 gcaccgacgccgccatcagc 351 |||||||||||||||||||| Sbjct: 236866 gcaccgacgccgccatcagc 236847
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 gcaccgacgccgccatcagc 351 |||||||||||||||||||| Sbjct: 235980 gcaccgacgccgccatcagc 235961
>gb|AC134855.5| Mus musculus BAC clone RP24-301M10 from 8, complete sequence Length = 142427 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 tacataattacatgcatgca 124 |||||||||||||||||||| Sbjct: 141774 tacataattacatgcatgca 141793
>gb|AC132126.3| Mus musculus BAC clone RP23-400E10 from 8, complete sequence Length = 204800 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 tacataattacatgcatgca 124 |||||||||||||||||||| Sbjct: 43298 tacataattacatgcatgca 43317 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,637,598 Number of Sequences: 3902068 Number of extensions: 4637598 Number of successful extensions: 95986 Number of sequences better than 10.0: 90 Number of HSP's better than 10.0 without gapping: 90 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 93462 Number of HSP's gapped (non-prelim): 2500 length of query: 719 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 696 effective length of database: 17,143,297,704 effective search space: 11931735201984 effective search space used: 11931735201984 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
