ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbaal33i14 |
|---|---|
| Clone Library Name | barley_pub |
>RL21_ARATH (Q43291) 60S ribosomal protein L21| Length = 164 Score = 291 bits (744), Expect = 1e-78 Identities = 135/153 (88%), Positives = 146/153 (95%) Frame = -3 Query: 619 RDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRA 440 RDLFARPFRKKGYIPL+TYLRT+KVG+YVDVKVNGA+HKGMPHKFYHGRTGR+WNVTKRA Sbjct: 12 RDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKRA 71 Query: 439 IGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQ 260 +GVE+NKQ+GNRIIRKRIHVRVEHVQ SRCAEEF+LRK KND+LKA AKA GE ISTKRQ Sbjct: 72 VGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAKANGETISTKRQ 131 Query: 259 PLGPKPGFMVEGTTIETVTPIPYDVVNDLKGGY 161 P GPKPGFMVEG T+ETVTPIPYDVVNDLKGGY Sbjct: 132 PKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY 164
>RL21_CYAPA (O82574) 60S ribosomal protein L21| Length = 161 Score = 161 bits (407), Expect = 2e-39 Identities = 84/147 (57%), Positives = 107/147 (72%), Gaps = 3/147 (2%) Frame = -3 Query: 619 RDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRA 440 R LFAR F+ G + L+TYL +K+GEYVDV N AVHKGMP K+YHGRTG VWNVTKRA Sbjct: 12 RALFARAFKTNGPVHLSTYLTNFKIGEYVDVVGNAAVHKGMPFKYYHGRTGIVWNVTKRA 71 Query: 439 IGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAK-ARGEVISTKR 263 IGVEINK+V +RII+KRIHVR++HV+ S C + F R +ND++K +A A+ V STKR Sbjct: 72 IGVEINKRVRHRIIKKRIHVRIDHVKKSSCRDSFLKRVKENDKIKHDAHVAKLPVPSTKR 131 Query: 262 QPLGPKPGFMV--EGTTIETVTPIPYD 188 P+ PK G ++ +G ET IPY+ Sbjct: 132 LPVLPKAGAIIKSKGQVPETCHAIPYE 158
>RL21A_YEAST (Q02753) 60S ribosomal protein L21-A| Length = 160 Score = 159 bits (401), Expect = 8e-39 Identities = 75/146 (51%), Positives = 104/146 (71%), Gaps = 2/146 (1%) Frame = -3 Query: 619 RDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRA 440 R +F R FRK G + L+TYL+ YKVG+ VD+K NG++ KGMPHKFY G+TG V+NVTK + Sbjct: 12 RYMFQRDFRKHGAVHLSTYLKVYKVGDIVDIKANGSIQKGMPHKFYQGKTGVVYNVTKSS 71 Query: 439 IGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQ 260 +GV INK VGNR + KR+++RVEH++ S+C +EF R N +AEAKA+G + KRQ Sbjct: 72 VGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAKAQGVAVQLKRQ 131 Query: 259 PLGPKPGFMV--EGTTIETVTPIPYD 188 P P+ +V EG +T+ P+PY+ Sbjct: 132 PAQPRESRIVSTEGNVPQTLAPVPYE 157
>RL21B_YEAST (Q12672) 60S ribosomal protein L21-B| Length = 160 Score = 157 bits (398), Expect = 2e-38 Identities = 74/146 (50%), Positives = 104/146 (71%), Gaps = 2/146 (1%) Frame = -3 Query: 619 RDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRA 440 R +F R FRK G + ++TYL+ YKVG+ VD+K NG++ KGMPHKFY G+TG V+NVTK + Sbjct: 12 RYMFQRDFRKHGAVHMSTYLKIYKVGDIVDIKANGSIQKGMPHKFYQGKTGVVYNVTKSS 71 Query: 439 IGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQ 260 +GV INK VGNR + KR+++RVEH++ S+C +EF R N +AEAKA+G + KRQ Sbjct: 72 VGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAKAQGVAVQLKRQ 131 Query: 259 PLGPKPGFMV--EGTTIETVTPIPYD 188 P P+ +V EG +T+ P+PY+ Sbjct: 132 PAQPRESRIVSTEGNVPQTLAPVPYE 157
>RL21_HUMAN (P46778) 60S ribosomal protein L21| Length = 159 Score = 155 bits (391), Expect = 1e-37 Identities = 74/146 (50%), Positives = 100/146 (68%), Gaps = 2/146 (1%) Frame = -3 Query: 619 RDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRA 440 R +F+RPFRK G +PL TY+R YK G+ VD+K G V KGMPHK YHG+TGRV+NVT+ A Sbjct: 11 RYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHA 70 Query: 439 IGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQ 260 +G+ +NKQV +I+ KRI+VR+EH++ S+ + F R +NDQ K EAK +G + KRQ Sbjct: 71 VGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQ 130 Query: 259 PLGPKPGFMV--EGTTIETVTPIPYD 188 P P+ V G E + PIPY+ Sbjct: 131 PAPPREAHFVRTNGKEPELLEPIPYE 156
>RL21_CHILA (Q6QN05) 60S ribosomal protein L21| Length = 159 Score = 154 bits (388), Expect = 3e-37 Identities = 73/146 (50%), Positives = 100/146 (68%), Gaps = 2/146 (1%) Frame = -3 Query: 619 RDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRA 440 R +F+RP+RK G +PL TY+R YK G+ VD+K G V KGMPHK YHG+TGRV+NVT+ A Sbjct: 11 RYMFSRPYRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHA 70 Query: 439 IGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQ 260 +G+ +NKQV +I+ KRI+VR+EH++ S+ + F R +NDQ K EAK +G + KRQ Sbjct: 71 VGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQ 130 Query: 259 PLGPKPGFMV--EGTTIETVTPIPYD 188 P P+ V G E + PIPY+ Sbjct: 131 PAPPREAHFVRTNGKEPELLEPIPYE 156
>RL21B_SCHPO (O42706) 60S ribosomal protein L21-B| Length = 160 Score = 151 bits (382), Expect = 1e-36 Identities = 75/146 (51%), Positives = 101/146 (69%), Gaps = 2/146 (1%) Frame = -3 Query: 619 RDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRA 440 R F R FR+ G I L+TYL+TYKVG+ VD+KVNGAV KGMPHK+YHG+TG V+NVT+ + Sbjct: 12 RYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGKTGVVYNVTQSS 71 Query: 439 IGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQ 260 +GV I K VGNR + KR++VR+EHV+ S+C ++F R N+ + EAKA+G+ + +RQ Sbjct: 72 VGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAKAQGKTVQLRRQ 131 Query: 259 PLGPKPGFMVEGTTIETVT--PIPYD 188 P P V E VT P+ YD Sbjct: 132 PAPPATAHFVSTENNEPVTLHPVAYD 157
>RL21A_SCHPO (Q9UUC1) 60S ribosomal protein L21-A| Length = 160 Score = 151 bits (382), Expect = 1e-36 Identities = 75/146 (51%), Positives = 101/146 (69%), Gaps = 2/146 (1%) Frame = -3 Query: 619 RDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRA 440 R F R FR+ G I L+TYL+TYKVG+ VD+KVNGAV KGMPHK+YHG+TG V+NVT+ + Sbjct: 12 RYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGKTGVVYNVTQSS 71 Query: 439 IGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQ 260 +GV I K VGNR + KR++VR+EHV+ S+C ++F R N+ + EAKA+G+ + +RQ Sbjct: 72 VGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAKAQGKTVQLRRQ 131 Query: 259 PLGPKPGFMVEGTTIETVT--PIPYD 188 P P V E VT P+ YD Sbjct: 132 PAPPAKAHFVSTENNEPVTLHPVAYD 157
>RL21_RAT (P20280) 60S ribosomal protein L21| Length = 159 Score = 150 bits (378), Expect = 4e-36 Identities = 72/146 (49%), Positives = 98/146 (67%), Gaps = 2/146 (1%) Frame = -3 Query: 619 RDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRA 440 R +F+RPFRK G +PL TY+R YK G+ VD+K G V KGMPHK YHG+TGRV+NVT+ A Sbjct: 11 RYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHA 70 Query: 439 IGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQ 260 +G+ +NKQV +I+ KRI+VR+EH++ S+ + F R +NDQ K EAK +G + Q Sbjct: 71 VGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLNGQ 130 Query: 259 PLGPKPGFMV--EGTTIETVTPIPYD 188 P P+ V G E + PIPY+ Sbjct: 131 PAPPREAHFVRTNGKEPELLEPIPYE 156
>RL21_MOUSE (O09167) 60S ribosomal protein L21| Length = 159 Score = 149 bits (377), Expect = 5e-36 Identities = 72/146 (49%), Positives = 98/146 (67%), Gaps = 2/146 (1%) Frame = -3 Query: 619 RDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRA 440 R +F+RPFRK G +PL TY+R YK G+ VD+K G V KGMPHK YHG+TGRV+NVT+ A Sbjct: 11 RYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHA 70 Query: 439 IGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQ 260 +G+ +NKQV +I+ KRI+VR+EH++ S+ + F R +NDQ K EAK +G + KR Sbjct: 71 VGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRH 130 Query: 259 PLGPKPGFMV--EGTTIETVTPIPYD 188 P+ V G E + PIPY+ Sbjct: 131 AAPPREAHFVRTNGKEPELLEPIPYE 156
>RL21_PYUST (P49667) 60S ribosomal protein L21 (Fragment)| Length = 155 Score = 136 bits (342), Expect = 6e-32 Identities = 66/144 (45%), Positives = 98/144 (68%), Gaps = 1/144 (0%) Frame = -3 Query: 616 DLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAI 437 D+F++ FR++G IPL YL YK G+ VD+K +G+V K PHK YHG+TGR++NVT+ A+ Sbjct: 11 DMFSKKFRERGAIPLNKYLTVYKKGDIVDIKGDGSVQKVCPHKVYHGKTGRIFNVTQHAV 70 Query: 436 GVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQP 257 G+ +NKQV RII KRI+VR+EH++ S+ F R +N++ + EA+ + ++ KRQP Sbjct: 71 GIIVNKQVRGRIIAKRINVRIEHIKHSKSRISFIQRVHENERKRKEAREKKIRVNLKRQP 130 Query: 256 LGPKPGFMVEGTT-IETVTPIPYD 188 P+ G V + E V PIPY+ Sbjct: 131 QQPRTGHFVRSSAEPELVEPIPYE 154
>RL21_CAEEL (P34334) 60S ribosomal protein L21| Length = 160 Score = 133 bits (335), Expect = 4e-31 Identities = 66/149 (44%), Positives = 98/149 (65%), Gaps = 3/149 (2%) Frame = -3 Query: 619 RDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRA 440 R +FAR FRK G L+TY YK G+ VD+K NGA KGMP K YHGRTGR++NVT+ A Sbjct: 11 RYMFARDFRKHGVEHLSTYYTQYKRGDLVDIKTNGAFQKGMPFKAYHGRTGRIFNVTRGA 70 Query: 439 IGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGE-VISTKR 263 +G+ +NK+V I+ KRI++R+EH++PS+C +F R ND+ + AK+ G+ V + KR Sbjct: 71 VGIIVNKRVRGNILPKRINIRIEHIKPSKCRTDFLNRVKSNDEKRKAAKSAGQPVPALKR 130 Query: 262 QPLGPKPGFMV--EGTTIETVTPIPYDVV 182 P+ P+ V + E + P+ +++V Sbjct: 131 LPVAPRGAHTVTTQNNEPELLAPLRFEIV 159
>RL21_ENTHI (P38653) 60S ribosomal protein L21| Length = 166 Score = 130 bits (326), Expect = 4e-30 Identities = 67/153 (43%), Positives = 95/153 (62%), Gaps = 9/153 (5%) Frame = -3 Query: 619 RDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRA 440 R LF RPFR G +T L TYKVG+YV + N ++ G+P+K +HG+TGRVWNV A Sbjct: 12 RKLFKRPFRGHGLSNTSTILHTYKVGDYVTILCNSSIQHGLPYKAFHGKTGRVWNVNPHA 71 Query: 439 IGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKV-------KNDQLKAEAKARGE 281 IGV +NK+V NRI+ KR+H+ EH++PS C ++F RK +N QLK E K Sbjct: 72 IGVMVNKKVNNRIVVKRLHISPEHIRPSGCQKDFLERKAAVAAIRKQNIQLKKEGKPL-L 130 Query: 280 VISTKRQPLGPKPGFMVEGTTIE--TVTPIPYD 188 + KR P P+P +++G I+ TV P+ ++ Sbjct: 131 PLPAKRLPKQPRPAELIKGADIKFTTVAPLKFE 163
>RL21_ENCCU (Q8SRW8) 60S ribosomal protein L21| Length = 160 Score = 112 bits (280), Expect = 9e-25 Identities = 55/126 (43%), Positives = 89/126 (70%), Gaps = 1/126 (0%) Frame = -3 Query: 619 RDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRA 440 R LF++ RK G ++ YL Y++G+ VD+ VN A+ KGMPHK+YHGRTGRV++V R+ Sbjct: 11 RYLFSQDHRKHGVAHVSKYLEKYEIGDMVDILVNPAMMKGMPHKYYHGRTGRVYDVKPRS 70 Query: 439 IGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVIS-TKR 263 + V + K+V + + K+I VR+EHV+ SRC+EE + R + ++ +A++RG V++ +KR Sbjct: 71 LNVALYKRVRGKYVIKKIIVRIEHVRKSRCSEESQKRILMAAEMARDAESRGVVLAPSKR 130 Query: 262 QPLGPK 245 + GP+ Sbjct: 131 KIEGPR 136
>RL21_PIG (P49666) 60S ribosomal protein L21 (Fragment)| Length = 61 Score = 73.9 bits (180), Expect = 3e-13 Identities = 31/51 (60%), Positives = 39/51 (76%) Frame = -3 Query: 619 RDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTG 467 R +F+RPFRK G +PL TY+R YK G+ VD+K G V KG+PHK YHG+TG Sbjct: 11 RYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGLPHKCYHGKTG 61
>RL21_SULAC (Q4JB11) 50S ribosomal protein L21e| Length = 103 Score = 66.6 bits (161), Expect = 6e-11 Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 1/88 (1%) Frame = -3 Query: 619 RDLFARPFRKKGYIP-LTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 443 R L + R+KG IP L+ + Y GEYV VK+N ++HKGMPH+ YHG+ G V V KR Sbjct: 13 RKLLEKKVREKGAIPKLSLLMHDYSQGEYVVVKINPSIHKGMPHRRYHGKVGLV--VGKR 70 Query: 442 AIGVEINKQVGNRIIRKRIHVRVEHVQP 359 E+ +G++ + + VR EH+ P Sbjct: 71 GKAYEVKVNIGDK--ERVLIVRPEHLIP 96
>RL21_AERPE (P58077) 50S ribosomal protein L21e| Length = 107 Score = 61.2 bits (147), Expect = 2e-09 Identities = 40/97 (41%), Positives = 56/97 (57%), Gaps = 2/97 (2%) Frame = -3 Query: 619 RDLFARPFRKKGYIP-LTTYLRTYKVGEYVDVKVNGAVHK-GMPHKFYHGRTGRVWNVTK 446 R L +P R+KG IP L+TYLR Y+VG+ V + +N + GMPH+ +HG TG V V K Sbjct: 13 RRLLRKPVREKGSIPRLSTYLREYRVGDKVAIIINPSFPDWGMPHRRFHGLTGTV--VGK 70 Query: 445 RAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFR 335 R E+ +G + RK + V H++P A E R Sbjct: 71 RGEAYEVEVYLGRK--RKTLFVPPVHLKPLSTAAERR 105
>RL21_METJA (P54013) 50S ribosomal protein L21e| Length = 98 Score = 59.7 bits (143), Expect = 7e-09 Identities = 32/80 (40%), Positives = 49/80 (61%) Frame = -3 Query: 595 RKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQ 416 R++G P+T LR +K GEYV + ++ +VHKGMPH +HGRTG V RA V++ Sbjct: 21 RERGLYPITRALREFKEGEYVHIVIDPSVHKGMPHPRFHGRTGIVVGKQGRAFIVKVRD- 79 Query: 415 VGNRIIRKRIHVRVEHVQPS 356 G + K+I +H++P+ Sbjct: 80 -GGKY--KQIIAYPQHLRPA 96
>RL21_SULTO (Q975F2) 50S ribosomal protein L21e| Length = 103 Score = 58.2 bits (139), Expect = 2e-08 Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 1/86 (1%) Frame = -3 Query: 619 RDLFARPFRKKGYIP-LTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 443 R L + R++G +P L+ + +K G+YV +K+N +VHKGMPH+ YHG+ G + KR Sbjct: 13 RKLLTKNVRERGAVPRLSLLMEEFKEGDYVVIKINPSVHKGMPHRRYHGKVGVIQG--KR 70 Query: 442 AIGVEINKQVGNRIIRKRIHVRVEHV 365 + +G++ K I VR EH+ Sbjct: 71 GKAYIVRVTLGDK--EKVIIVRPEHL 94
>RL21_SULSO (Q9UXE0) 50S ribosomal protein L21e| Length = 101 Score = 55.5 bits (132), Expect = 1e-07 Identities = 32/88 (36%), Positives = 53/88 (60%), Gaps = 1/88 (1%) Frame = -3 Query: 619 RDLFARPFRKKGYIP-LTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKR 443 R L + R++G +P L+ + YK G+ V VK+N +VH+GMPH+ Y G+ G++ + KR Sbjct: 13 RSLLRKSPRERGAVPSLSKLMVEYKEGDNVVVKINPSVHQGMPHRRYQGKVGKI--IGKR 70 Query: 442 AIGVEINKQVGNRIIRKRIHVRVEHVQP 359 ++ +G++ K I VR EH+ P Sbjct: 71 GRAYLVSVTLGDK--EKVIIVRPEHLVP 96
>RL21_PYRHO (O74001) 50S ribosomal protein L21e| Length = 97 Score = 54.7 bits (130), Expect = 2e-07 Identities = 28/81 (34%), Positives = 47/81 (58%) Frame = -3 Query: 595 RKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQ 416 R++G PLT +L+ ++VG+ V + + + HKGMP +HGRTG V V KR + Sbjct: 21 RRRGLPPLTRFLQEFEVGQKVHIVIEPSYHKGMPDPRFHGRTGTV--VGKRGDAYIVEVP 78 Query: 415 VGNRIIRKRIHVRVEHVQPSR 353 GN++ K + + H++P + Sbjct: 79 DGNKV--KTLFIHPVHLRPQK 97
>RL21_PYRAB (Q9UZP1) 50S ribosomal protein L21e| Length = 97 Score = 54.7 bits (130), Expect = 2e-07 Identities = 28/81 (34%), Positives = 47/81 (58%) Frame = -3 Query: 595 RKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQ 416 R++G PLT +L+ ++VG+ V + + + HKGMP +HGRTG V V KR + Sbjct: 21 RRRGLPPLTRFLQEFEVGQRVHIVIEPSYHKGMPDPRFHGRTGTV--VGKRGDAYIVEVP 78 Query: 415 VGNRIIRKRIHVRVEHVQPSR 353 GN++ K + + H++P + Sbjct: 79 DGNKV--KTLFIHPVHLRPQK 97
>RL21_PYRFU (Q8U217) 50S ribosomal protein L21e| Length = 97 Score = 53.1 bits (126), Expect = 6e-07 Identities = 27/81 (33%), Positives = 48/81 (59%) Frame = -3 Query: 595 RKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQ 416 R++G PLT +L+ ++VG+ V + + + HKGMP +HGRTG V V KR + + Sbjct: 21 RRRGLPPLTRFLQEFEVGQRVHIVIEPSYHKGMPDPRFHGRTGTV--VGKRGEAYIVEIK 78 Query: 415 VGNRIIRKRIHVRVEHVQPSR 353 G+++ K + + H++P + Sbjct: 79 DGSKV--KTLFIHPVHLRPQK 97
>RL21_METKA (Q8TUU3) 50S ribosomal protein L21e| Length = 102 Score = 53.1 bits (126), Expect = 6e-07 Identities = 31/84 (36%), Positives = 47/84 (55%) Frame = -3 Query: 595 RKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQ 416 R++G PL + ++ G+ V + ++ +VHKGMPH YHGRTG V RA V+I Sbjct: 21 RERGLSPLGPMTQEFEEGQKVHIVIDPSVHKGMPHPRYHGRTGEVVGRQGRAYIVKIRD- 79 Query: 415 VGNRIIRKRIHVRVEHVQPSRCAE 344 G + K++ V EH++P E Sbjct: 80 -GGK--EKKLIVYPEHLKPQEQPE 100
>RL21_PYRKO (Q5JI51) 50S ribosomal protein L21e| Length = 98 Score = 51.2 bits (121), Expect = 2e-06 Identities = 27/81 (33%), Positives = 45/81 (55%) Frame = -3 Query: 595 RKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQ 416 R++G PLT +L+ ++VG+ V + + + HKGMP +HGRTG V V KR + Sbjct: 21 RRRGLPPLTRFLQEFEVGQKVHIVIEPSYHKGMPDPRFHGRTGTV--VGKRGDAYIVQIT 78 Query: 415 VGNRIIRKRIHVRVEHVQPSR 353 G ++ K + H++P + Sbjct: 79 DGGKV--KTFFIHPVHLRPQK 97
>RL21_METMP (Q6M125) 50S ribosomal protein L21e| Length = 97 Score = 50.8 bits (120), Expect = 3e-06 Identities = 30/81 (37%), Positives = 46/81 (56%) Frame = -3 Query: 595 RKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQ 416 R+KG PLT L+ Y G+ V V ++ +V KGMPH +HG+TG V V +R + + Sbjct: 20 RQKGMAPLTRALKCYTEGDLVHVVLDPSVQKGMPHPKFHGKTGVV--VAQRGSSFLVRVK 77 Query: 415 VGNRIIRKRIHVRVEHVQPSR 353 G + K I R +H++ S+ Sbjct: 78 DGGKY--KDIIARPQHLRESK 96
>RL21_METTH (O27378) 50S ribosomal protein L21e| Length = 96 Score = 48.1 bits (113), Expect = 2e-05 Identities = 23/72 (31%), Positives = 45/72 (62%) Frame = -3 Query: 577 PLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRII 398 P+T ++++ G+ V + ++ ++H+G PH +HG+TGRV + ++ V + GN+ Sbjct: 26 PITRKIQSFNEGDLVHIIIDPSIHRGQPHPRFHGKTGRVVGMMGKSYVVALKD--GNK-- 81 Query: 397 RKRIHVRVEHVQ 362 K++ VR EH+Q Sbjct: 82 DKQLVVRPEHLQ 93
>RL21_ARCFU (O28743) 50S ribosomal protein L21e| Length = 97 Score = 47.4 bits (111), Expect = 3e-05 Identities = 29/79 (36%), Positives = 46/79 (58%) Frame = -3 Query: 595 RKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQ 416 R+KG + + +L+T+ VG+ V + + A KGMPH + GRTG V RA V++ Sbjct: 21 REKG-VRIRKFLQTFDVGQRVHIDIEPASQKGMPHPRFQGRTGVVIGQRGRAYLVQVRD- 78 Query: 415 VGNRIIRKRIHVRVEHVQP 359 G ++ K + VR EH++P Sbjct: 79 -GGKM--KTLIVRPEHLKP 94
>RL21_XENLA (P49628) 60S ribosomal protein L21 (Fragment)| Length = 33 Score = 44.3 bits (103), Expect = 3e-04 Identities = 18/32 (56%), Positives = 24/32 (75%) Frame = -3 Query: 604 RPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAV 509 RPFRK G +PL+TY+R YK G+ VD+K G + Sbjct: 1 RPFRKHGAVPLSTYMRIYKKGDIVDIKGMGTI 32
>RL21_METAC (Q8TQU3) 50S ribosomal protein L21e| Length = 97 Score = 41.6 bits (96), Expect = 0.002 Identities = 21/81 (25%), Positives = 46/81 (56%) Frame = -3 Query: 595 RKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQ 416 R++G P++ ++ ++ G+ V + ++ +V KGMP+ + G TG+V R+ +E+ Sbjct: 20 RERGISPVSRAIQEFEEGQMVHIDIDPSVQKGMPNPKFQGSTGKVIGQRGRSYVLEVRS- 78 Query: 415 VGNRIIRKRIHVRVEHVQPSR 353 GN + K + +H++P + Sbjct: 79 -GNAM--KEVFSLPQHLKPQK 96
>RL21_PYRAE (Q8ZTB5) 50S ribosomal protein L21e| Length = 100 Score = 40.8 bits (94), Expect = 0.003 Identities = 27/87 (31%), Positives = 44/87 (50%) Frame = -3 Query: 619 RDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRA 440 R L + R+KG L+ L YKVG+ V + ++ PH+ Y G+ G V + RA Sbjct: 13 RKLLRKKPREKGLSGLSRLLYEYKVGDKVIIDIDSTFISTAPHRRYQGKVGTVVGIRGRA 72 Query: 439 IGVEINKQVGNRIIRKRIHVRVEHVQP 359 +E +G++ +K I EH++P Sbjct: 73 YVIE--TFLGDK--KKIIITTPEHLKP 95
>RL21_PICTO (Q6L228) 50S ribosomal protein L21e| Length = 97 Score = 38.9 bits (89), Expect = 0.012 Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 3/84 (3%) Frame = -3 Query: 619 RDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRA 440 R + + + KG + ++T++VG+ + +N AV GMPH + G TG + + + Sbjct: 13 RRVMTKSVKNKGMPKVNEMMKTFEVGDRAAIVINSAVPDGMPHHDFQGITGVITGM--QG 70 Query: 439 IGVEINKQVGN---RIIRKRIHVR 377 ++ +VGN ++I +H+R Sbjct: 71 SCYILSFKVGNVEKKVIAAPVHLR 94
>RL21_NANEQ (Q74N21) 50S ribosomal protein L21e| Length = 98 Score = 38.1 bits (87), Expect = 0.021 Identities = 24/86 (27%), Positives = 42/86 (48%) Frame = -3 Query: 619 RDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRA 440 RD ++ R++G + +T L+ + + V + + + H GMPH YHG G V V KR Sbjct: 14 RDKLSKHPRQRGKLTITRILQKFNNNDKVAIVIEPSWHYGMPHPRYHGLVGTV--VGKRG 71 Query: 439 IGVEINKQVGNRIIRKRIHVRVEHVQ 362 E+ + +K + V H++ Sbjct: 72 NCYEVELEFNGE--KKLLIVHPAHLK 95
>RL21_METMA (Q8PU21) 50S ribosomal protein L21e| Length = 97 Score = 37.7 bits (86), Expect = 0.027 Identities = 20/81 (24%), Positives = 46/81 (56%) Frame = -3 Query: 595 RKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQ 416 R++G P++ ++ ++ G+ V + ++ +V KGMP+ + G TG+V + +R + + Sbjct: 20 RERGISPVSKAIQEFEDGQMVHIDIDPSVQKGMPNPKFQGFTGKV--IGQRGRSYILAVR 77 Query: 415 VGNRIIRKRIHVRVEHVQPSR 353 GN + K + +H++P + Sbjct: 78 EGNSM--KEVFSVPQHLKPQK 96
>ZN691_MOUSE (Q3TDE8) Zinc finger protein 691| Length = 283 Score = 31.2 bits (69), Expect = 2.6 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = -3 Query: 409 NRIIRKRIHVRVEHVQPSRCAEEFRLR 329 NRI +RIH+ +H Q ++C E FR R Sbjct: 125 NRIRHERIHLEEKHYQCAKCQESFRRR 151
>AMD_RAT (P14925) Peptidyl-glycine alpha-amidating monooxygenase precursor (EC| 1.14.17.3) (PAM) Length = 976 Score = 30.8 bits (68), Expect = 3.4 Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 3/131 (2%) Frame = -3 Query: 577 PLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVW---NVTKRAIGVEINKQVGN 407 P+ ++ + GE +DV H MPH G V+ T + +++ + Sbjct: 758 PVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEKMEH 817 Query: 406 RIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVE 227 R + K+ + V+ ++ + E KV+N +E + E +Q L +PG V Sbjct: 818 RSV-KKAGIEVQEIKEAEAVVE---PKVENKPTSSELQKMQE-----KQKLSTEPGSGVS 868 Query: 226 GTTIETVTPIP 194 I T+ IP Sbjct: 869 VVLITTLLVIP 879
>YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor| Length = 374 Score = 30.0 bits (66), Expect = 5.7 Identities = 28/124 (22%), Positives = 46/124 (37%) Frame = -1 Query: 492 TSSTTAAPDACGXXXXXXXXXXXXXRLETASSGKGSMSVLSMCSHPGVLRSSA*GK*RMT 313 +++TT +P + ++SS S S S S SS Sbjct: 148 STTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------- 199 Query: 312 SSRRKPRHVVRSSAPRGSHSALNPGSWSRVPQSRPSLPFLMMWSMISRVVTRVFGLSACT 133 SS V +S+ SHS+ + S S SRPS + +M S ++ + Sbjct: 200 SSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSFITTMSSSTFISTVTVTPSS 259 Query: 132 TSSN 121 +SS+ Sbjct: 260 SSSS 263
>KIF1C_HUMAN (O43896) Kinesin-like protein KIF1C| Length = 1103 Score = 30.0 bits (66), Expect = 5.7 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -1 Query: 270 PRGSHSALNPGSWSRVPQSRPSLPFLMMWSMISRVV 163 P GS +A R+P +RP P L W +SR++ Sbjct: 893 PEGSEAAEEAAPSDRMPSARPPSPPLSSWERVSRLM 928
>HN_PI3HU (P12563) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 29.6 bits (65), Expect = 7.5 Identities = 17/71 (23%), Positives = 29/71 (40%) Frame = -3 Query: 373 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 194 + V P R + ++ + D ++ T + L P PG + TT++ P Sbjct: 135 QEVPPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLTMPTTVDGCVRTP 194 Query: 193 YDVVNDLKGGY 161 V+NDL Y Sbjct: 195 SLVINDLIYAY 205
>HN_PI3HA (P12561) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 29.6 bits (65), Expect = 7.5 Identities = 17/71 (23%), Positives = 29/71 (40%) Frame = -3 Query: 373 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 194 + V P R + ++ + D ++ T + L P PG + TT++ P Sbjct: 135 QEVPPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLAMPTTVDGCVRTP 194 Query: 193 YDVVNDLKGGY 161 V+NDL Y Sbjct: 195 SLVINDLIYAY 205
>HN_PI3H4 (P08492) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 29.6 bits (65), Expect = 7.5 Identities = 17/71 (23%), Positives = 29/71 (40%) Frame = -3 Query: 373 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 194 + V P R + ++ + D ++ T + L P PG + TT++ P Sbjct: 135 QEVPPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLAMPTTVDGCVRTP 194 Query: 193 YDVVNDLKGGY 161 V+NDL Y Sbjct: 195 SLVINDLIYAY 205
>RL21_THEAC (Q9HIN8) 50S ribosomal protein L21e| Length = 98 Score = 29.6 bits (65), Expect = 7.5 Identities = 11/35 (31%), Positives = 22/35 (62%) Frame = -3 Query: 565 YLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRV 461 +++ ++ G+ V + + +VH GMP+ + G TG V Sbjct: 31 FMQEFEPGDRVAIDIEPSVHAGMPYHRFQGYTGVV 65
>OXA11_SCHPO (O14300) Inner membrane protein oxa1-1, mitochondrial precursor| (Cytochrome oxidase biogenesis protein 1-1) (Sp1) Length = 374 Score = 29.3 bits (64), Expect = 9.8 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = +3 Query: 300 SALSWSFFTFLRRNSSAHLDGCTCSTRTWILFLMMRFPTCLL 425 SA+ +SFF +R+ S +DG T W L + P C+L Sbjct: 170 SAVFFSFFYAIRKMSRLSVDGFTTGGLAWFKDLSIPDPYCIL 211
>HN_PI3HW (P12565) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 29.3 bits (64), Expect = 9.8 Identities = 17/71 (23%), Positives = 29/71 (40%) Frame = -3 Query: 373 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 194 + V P R + ++ + D ++ T + L P PG + TT++ P Sbjct: 135 QEVLPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLAMPTTVDGCVRTP 194 Query: 193 YDVVNDLKGGY 161 V+NDL Y Sbjct: 195 SLVINDLIYAY 205
>RL21_THEVO (Q97BZ1) 50S ribosomal protein L21e| Length = 98 Score = 29.3 bits (64), Expect = 9.8 Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 2/75 (2%) Frame = -3 Query: 595 RKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRA--IGVEIN 422 RKK I ++ + G+ V + + +VH GMP+ + G TG V +GV++ Sbjct: 23 RKKSIIG--RMMQEFSPGDRVAIDIEPSVHNGMPYHRFQGYTGIVEGAQGNCYKVGVKVG 80 Query: 421 KQVGNRIIRKRIHVR 377 + +I +H++ Sbjct: 81 -SLTKYVIASPVHLK 94
>AMD_MOUSE (P97467) Peptidyl-glycine alpha-amidating monooxygenase precursor (EC| 1.14.17.3) (PAM) Length = 979 Score = 29.3 bits (64), Expect = 9.8 Identities = 33/138 (23%), Positives = 54/138 (39%), Gaps = 6/138 (4%) Frame = -3 Query: 577 PLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVW------NVTKRAIGVEINKQ 416 P+ ++ + GE +DV H MPH G V+ N + E + Sbjct: 758 PVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTESRLE 817 Query: 415 VGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGF 236 V +R + K+ + V ++ + E KVKN +E + E ++ L PG Sbjct: 818 VEHRSV-KKAGIEVPEIKEAEAVVE---PKVKNKPTSSELQKMQE-----KKKLIKDPGS 868 Query: 235 MVEGTTIETVTPIPYDVV 182 V I T+ IP V+ Sbjct: 869 GVPVVLITTLLVIPVVVL 886 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,853,285 Number of Sequences: 219361 Number of extensions: 1793421 Number of successful extensions: 5037 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 4850 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5036 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5653129581 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
