>gb|AF523077.1| Acacia lycopodiifolia trnK gene, partial sequence; and maturase-like
            protein gene, partial cds; chloroplast genes for
            chloroplast products
          Length = 2034

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 180  aaaatcatgtgaaaaagcttgataca 205
            |||||||| |||||||||||||||||
Sbjct: 1821 aaaatcatatgaaaaagcttgataca 1846

>gb|AF523076.1| Acacia adoxa chloroplast trnK gene, intron sequence; and
            maturase-like sequence
          Length = 2443

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 180  aaaatcatgtgaaaaagcttgataca 205
            |||||||| |||||||||||||||||
Sbjct: 1807 aaaatcatatgaaaaagcttgataca 1832

>gb|DQ371879.1| Acacia lycopodifolia voucher CANB 615616 trnK gene, partial sequence;
            chloroplast
          Length = 1981

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 180  aaaatcatgtgaaaaagcttgataca 205
            |||||||| |||||||||||||||||
Sbjct: 1768 aaaatcatatgaaaaagcttgataca 1793

>gb|AC091523.23| Mus musculus strain C57BL/6J clone rp23-77a8 map 1, complete sequence
          Length = 235509

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 111    taaaaacctagagaacatagctctc 135
              |||||||||||| ||||||||||||
Sbjct: 172389 taaaaacctagaaaacatagctctc 172413

>gb|AC158930.3| Mus musculus chromosome 1, clone RP23-244J9, complete sequence
          Length = 214509

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 111   taaaaacctagagaacatagctctc 135
             |||||||||||| ||||||||||||
Sbjct: 10877 taaaaacctagaaaacatagctctc 10901

>gb|AC163270.5| Mus musculus chromosome 1, clone RP24-292B21, complete sequence
          Length = 154928

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 144   aagagtagttcattttcattt 164
             |||||||||||||||||||||
Sbjct: 99239 aagagtagttcattttcattt 99219

>gb|AC101455.9| Mus musculus chromosome 1, clone RP23-185E17, complete sequence
          Length = 185594

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 144    aagagtagttcattttcattt 164
              |||||||||||||||||||||
Sbjct: 139078 aagagtagttcattttcattt 139098

>emb|BX005036.6| Mouse DNA sequence from clone RP23-185E17 on chromosome 1, complete
              sequence
          Length = 185591

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 144    aagagtagttcattttcattt 164
              |||||||||||||||||||||
Sbjct: 139075 aagagtagttcattttcattt 139095

>emb|BX677675.9| Zebrafish DNA sequence from clone DKEYP-90G12 in linkage group 2,
             complete sequence
          Length = 124301

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    catcaaagtgaaactagaga 81
             ||||||||||||||||||||
Sbjct: 31501 catcaaagtgaaactagaga 31520

>emb|AL391737.2|CNS06C8G chromosome I of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 209982

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   aaaaataaaaacctagagaa 125
             ||||||||||||||||||||
Sbjct: 41464 aaaaataaaaacctagagaa 41445

>gb|AE008685.1|AE008685 Mus musculus T-cell receptor alpha/delta locus  section 3 of 4 of the
              complete region
          Length = 400099

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 399    gaacaaccctgtaaggtact 418
              ||||||||||||||||||||
Sbjct: 243004 gaacaaccctgtaaggtact 242985

>gb|AE008684.1|AE008684 Mus musculus T-cell receptor alpha/delta locus  section 2 of 4 of the
              complete region
          Length = 400099

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 399    gaacaaccctgtaaggtact 418
              ||||||||||||||||||||
Sbjct: 204838 gaacaaccctgtaaggtact 204819

>gb|AC008872.6| Homo sapiens chromosome 5 clone CTD-2198D21, complete sequence
          Length = 128703

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 381  ccattcagtaaataccaggaacaa 404
            |||| |||||||||||||||||||
Sbjct: 9692 ccatgcagtaaataccaggaacaa 9715

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 145      agagtagttcattttcattt 164
                ||||||||||||||||||||
Sbjct: 16985920 agagtagttcattttcattt 16985901

>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0488D02
          Length = 154537

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 145    agagtagttcattttcattt 164
              ||||||||||||||||||||
Sbjct: 115733 agagtagttcattttcattt 115714

>gb|AC005402.1|AC005402 Mus musculus clone UWGC:mbac37 from 14D1-D2 (T-Cell Receptor Alpha
              Locus), complete sequence
          Length = 132090

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 399    gaacaaccctgtaaggtact 418
              ||||||||||||||||||||
Sbjct: 111955 gaacaaccctgtaaggtact 111936

>gb|AC003997.1|AC003997 Mouse BAC mbac20 from 14D1-D2 (T-Cell Receptor Alpha Locus), complete
             sequence
          Length = 122176

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 399   gaacaaccctgtaaggtact 418
             ||||||||||||||||||||
Sbjct: 88417 gaacaaccctgtaaggtact 88398


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,320,733
Number of Sequences: 3902068
Number of extensions: 4320733
Number of successful extensions: 66159
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66111
Number of HSP's gapped (non-prelim): 48
length of query: 437
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 415
effective length of database: 17,147,199,772
effective search space: 7116087905380
effective search space used: 7116087905380
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)