ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal33h21 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ635225.1| Triticum aestivum mRNA for acid beta-fructofuranosidase precursor (inv1 gene) Length = 2250 Score = 323 bits (163), Expect = 4e-85 Identities = 349/411 (84%) Strand = Plus / Minus Query: 213 gtaggcctggttataggaggagtccatctcgtgggcgacgaggctggttacagtgacccg 272 ||||||||| || ||||||||||||||||||||| ||||||| || || || ||||||| Sbjct: 2048 gtaggcctgattgtaggaggagtccatctcgtggacgacgagcctcgtgacgttgacccg 1989 Query: 273 ggcgccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcgg 332 ||||| ||||||||||||||||||||| |||||||||||||||||||||||||| || || Sbjct: 1988 ggcgctggtggcgttgttgaagaggtagaccccagcgttggcatagatggcctccgttgg 1929 Query: 333 atacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatggagtg 392 ||||||||||||||| |||| ||||||||||||||||||||||||| || ||||| || Sbjct: 1928 gtacacccgtgacgtcgccgtcaacctcccgcccattgcaaagctctcaacaatggaatg 1869 Query: 393 gtccaccagcaccctcactgacaggtcctcaccgttcagcaccggcacagtgttgccaac 452 |||||| |||||||||||||| | ||||| || | ||||| || ||| | ||||| || Sbjct: 1868 gtccactagcaccctcactgaaaactcctcgccatcgagcacggggacaatattgcctac 1809 Query: 453 gaccctcttgacaatgtcattggcacgagacgaacgcgtctcgtcgtggcagaagtgtgt 512 |||| |||||||||| || |||||| |||| || ||||||||||||||||| |||||||| Sbjct: 1808 gaccttcttgacaatatcgttggcatgagatgagcgcgtctcgtcgtggcaaaagtgtgt 1749 Query: 513 gcgcatgcctccgtcgaggcccctcgatacatagaaatagacggaggtccgctccgcatc 572 ||||| ||| ||||||||||| || | || ||||| || ||| |||||||||| || Sbjct: 1748 gcgcaagccaccgtcgaggcctctggcgacgtagaagtacacgccggtccgctccatgtc 1689 Query: 573 accaccgtggtgcctggtatcggcgagcacgagcaggccgaagggtccgag 623 |||| ||||||||| | ||| || ||||| || ||||||||||| ||||| Sbjct: 1688 gccactgtggtgcctagcatcagcaagcacaaggaggccgaagggaccgag 1638
>gb|AY082350.1| Lolium perenne fructosyltransferase (FT2) mRNA, complete cds Length = 2337 Score = 272 bits (137), Expect = 1e-69 Identities = 338/405 (83%) Strand = Plus / Minus Query: 219 ctggttataggaggagtccatctcgtgggcgacgaggctggttacagtgacccgggcgcc 278 |||||| ||||||| ||||||||| ||| ||||||| ||||| | ||||||||||| || Sbjct: 2078 ctggttgtaggaggggtccatctcatggacgacgagactggtggcggtgacccgggcacc 2019 Query: 279 ggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcggatacac 338 ||||||||||||||||||||| ||||| || ||||| ||||||||||| ||||| || || Sbjct: 2018 ggtggcgttgttgaagaggtataccccggcattggcgtagatggcctcagtcgggtaaac 1959 Query: 339 ccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatggagtggtccac 398 ||||| |||||| |||||||| ||| ||| |||||||| || |||||||||||||| Sbjct: 1958 tcgtgaagtcaccaccgacctcccaccctgtgcgaagctctcgacaatggagtggtccac 1899 Query: 399 cagcaccctcactgacaggtcctcaccgttcagcaccggcacagtgttgccaacgaccct 458 ||| ||||| || ||||| |||| |||| ||||| ||||| |||||||||||||||| Sbjct: 1898 cagaaccctaacagacagcgcctctccgtcgagcactggcacgatgttgccaacgaccct 1839 Query: 459 cttgacaatgtcattggcacgagacgaacgcgtctcgtcgtggcagaagtgtgtgcgcat 518 |||||||||||| |||||||| || || || | |||||| ||||||||||| ||||||| Sbjct: 1838 cttgacaatgtcgttggcacgggatgaccgtgactcgtcatggcagaagtgcgtgcgcag 1779 Query: 519 gcctccgtcgaggcccctcgatacatagaaatagacggaggtccgctccgcatcaccacc 578 | || ||||||||||||| || ||||| ||||||| |||| |||||| || || || Sbjct: 1778 gttgccatcgaggcccctcgcgacgtagaagtagacggcggtctgctccgtgtccccgcc 1719 Query: 579 gtggtgcctggtatcggcgagcacgagcaggccgaagggtccgag 623 ||| |||||| ||||||||| ||||||||||| ||||| ||||| Sbjct: 1718 atggcgcctggcatcggcgagtacgagcaggccaaagggaccgag 1674
>emb|AJ623275.1| Hordeum vulgare mRNA for soluble acid invertase (sai gene) Length = 2038 Score = 230 bits (116), Expect = 4e-57 Identities = 251/296 (84%) Strand = Plus / Minus Query: 280 gtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcggatacacc 339 ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 1965 gtggcattgttgaagaggtacaccccagcgttggcgtagatggcctccgtcgggtacact 1906 Query: 340 cgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatggagtggtccacc 399 ||||| || |||| ||||||| ||||| |||||||| || ||||| || || ||||| Sbjct: 1905 cgtgatgttgccgtcaacctcccacccatcgcaaagctttcaacgatcgaatgatccact 1846 Query: 400 agcaccctcactgacaggtcctcaccgttcagcaccggcacagtgttgccaacgaccctc 459 ||||||||||||||||| || || || | ||||||||||| || ||||| || |||||| Sbjct: 1845 agcaccctcactgacagctcttcgccatcaagcaccggcacggtattgcctacaaccctc 1786 Query: 460 ttgacaatgtcattggcacgagacgaacgcgtctcgtcgtggcagaagtgtgtgcgcatg 519 ||||||||||| |||||| |||| || ||| |||| ||||||||||||||||| ||| | Sbjct: 1785 ttgacaatgtcgttggcatgagatgagcgcatctcatcgtggcagaagtgtgtatgcaag 1726 Query: 520 cctccgtcgaggcccctcgatacatagaaatagacggaggtccgctccgcatcacc 575 || |||||||||||||| | |||||||| ||||||| ||| |||||||| ||||| Sbjct: 1725 ccaccgtcgaggcccctggcgacatagaagtagacggcggtgcgctccgcgtcacc 1670
>gb|DQ267825.1| Dendrocalamopsis oldhamii vacuolar invertase BObetaFRUCT3 mRNA, complete cds Length = 2155 Score = 192 bits (97), Expect = 1e-45 Identities = 253/305 (82%) Strand = Plus / Minus Query: 213 gtaggcctggttataggaggagtccatctcgtgggcgacgaggctggttacagtgacccg 272 |||||| ||||| ||||||||||||||||||||| |||||||||| | | ||||| || Sbjct: 1968 gtaggcttggttgtaggaggagtccatctcgtggacgacgaggctcttggcggtgacgcg 1909 Query: 273 ggcgccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcgg 332 |||| |||||| |||||||||||||||||||| |||||||| ||||||||||| || || Sbjct: 1908 ggcgttggtggcattgttgaagaggtacacccctgcgttggcgtagatggcctccgttgg 1849 Query: 333 atacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatggagtg 392 ||||| || |||||| |||| |||||||||||| || |||||||| ||||||||||| Sbjct: 1848 gtacacgcgcgacgtcgccgtcgacctcccgccctgcgcgaagctctcgacgatggagtg 1789 Query: 393 gtccaccagcaccctcactgacaggtcctcaccgttcagcaccggcacagtgttgccaac 452 |||||||| |||||||| || || ||| || | ||||| ||||| ||||| || Sbjct: 1788 atccaccaggaccctcaccgagagcgtctcgccatcgagcacgggcacgacattgccgac 1729 Query: 453 gaccctcttgacaatgtcattggcacgagacgaacgcgtctcgtcgtggcagaagtgtgt 512 |||||||||||| ||||| |||||| ||||| | ||||||||| ||||||||||| || Sbjct: 1728 gaccctcttgacgatgtcgttggcatatgacgacctcgtctcgtcctggcagaagtgagt 1669 Query: 513 gcgca 517 ||||| Sbjct: 1668 gcgca 1664 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 592 tcggcgagcacgagcaggccgaagggtccgagggcgcc 629 |||| ||||||||||||||||||||| ||||| ||||| Sbjct: 1601 tcggtgagcacgagcaggccgaaggggccgagcgcgcc 1564 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 atcatggcatcttccactag 46 |||||||||||||||||||| Sbjct: 2124 atcatggcatcttccactag 2105
>emb|AJ532549.1|LTE532549 Lolium temulentum mRNA for putative soluble acid invertase (inv1:4 gene) Length = 2407 Score = 161 bits (81), Expect = 3e-36 Identities = 261/321 (81%) Strand = Plus / Minus Query: 213 gtaggcctggttataggaggagtccatctcgtgggcgacgaggctggttacagtgacccg 272 ||||||||| || |||||| |||||||||| || | ||||||| || | ||||| || Sbjct: 2152 gtaggcctgattgtaggagaagtccatctcatgtactgcgaggctagtggcggtgacgcg 2093 Query: 273 ggcgccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcgg 332 ||| |||||||| |||||||||||||||||||| | |||||| |||||||||||||| || Sbjct: 2092 ggcaccggtggcattgttgaagaggtacaccccggtgttggcgtagatggcctcggttgg 2033 Query: 333 atacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatggagtg 392 ||||| || || ||||| || |||||||| ||| |||||||||||| || |||||||| Sbjct: 2032 gtacactcgcgaagtcactgtcgacctcccaccctgtgcaaagctctcgacaatggagtg 1973 Query: 393 gtccaccagcaccctcactgacaggtcctcaccgttcagcaccggcacagtgttgccaac 452 ||||||||| || || | || || |||| || | ||||||||||| ||| || || Sbjct: 1972 gtccaccagtactctgatggatagtgcctcgccatcaagcaccggcacgacgttaccgac 1913 Query: 453 gaccctcttgacaatgtcattggcacgagacgaacgcgtctcgtcgtggcagaagtgtgt 512 |||||||| |||||||| |||||||| ||||| || | ||| || ||||||||||| || Sbjct: 1912 aaccctcttcacaatgtcgttggcacgcgacgaccgtgactcatcatggcagaagtgcgt 1853 Query: 513 gcgcatgcctccgtcgaggcc 533 ||||| ||| ||||| ||||| Sbjct: 1852 gcgcaggccgccgtcaaggcc 1832 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 74 gacaatgaatagacataataaaaatgaaaa 103 |||||||||||||||||||||| ||||||| Sbjct: 2260 gacaatgaatagacataataaagatgaaaa 2231
>gb|AY575717.1| Triticum monococcum vacuolar invertase1 (vin1) mRNA, complete cds Length = 2414 Score = 141 bits (71), Expect = 3e-30 Identities = 143/167 (85%) Strand = Plus / Minus Query: 274 gcgccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcgga 333 |||||||||||||||||||| |||||||| |||||| ||| ||||||||||| |||||| Sbjct: 1929 gcgccggtggcgttgttgaaaaggtacacgccagcggcggcgtagatggcctccgtcgga 1870 Query: 334 tacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatggagtgg 393 ||||||| |||||| | ||||||||||| ||||| || |||||||| || || |||||| Sbjct: 1869 tacaccctcgacgtcgcggtggacctcccacccatggcgaagctctccacaatcgagtgg 1810 Query: 394 tccaccagcaccctcactgacaggtcctcaccgttcagcaccggcac 440 ||||||| |||||| || || || |||||||||| ||||| ||||| Sbjct: 1809 tccaccaacaccctgacggatagatcctcaccgtcgagcacaggcac 1763
>gb|AY575557.1| Oryza sativa (indica cultivar-group) cultivar IR64 vacuolar invertase 2 mRNA, partial cds Length = 503 Score = 139 bits (70), Expect = 1e-29 Identities = 163/194 (84%) Strand = Plus / Minus Query: 213 gtaggcctggttataggaggagtccatctcgtgggcgacgaggctggttacagtgacccg 272 |||||| ||||| ||||||||||||||||||||| ||||||| | | | ||||| || Sbjct: 258 gtaggcttggttgtaggaggagtccatctcgtggacgacgagcttcttggccgtgacgcg 199 Query: 273 ggcgccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcgg 332 |||| ||||||||||||||||||| | || || |||||||| ||||||||||| || || Sbjct: 198 cgcgctggtggcgttgttgaagaggaagacgccggcgttggcgtagatggcctccgtggg 139 Query: 333 atacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatggagtg 392 |||||||| |||||| ||||||||||||| ||| || |||||||| ||||||||||| Sbjct: 138 gtacacccgcgacgtcgccgtggacctccccccctgcgcgaagctctcgacgatggagtg 79 Query: 393 gtccaccagcaccc 406 ||| || ||||||| Sbjct: 78 gtcgacgagcaccc 65
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 139 bits (70), Expect = 1e-29 Identities = 163/194 (84%) Strand = Plus / Minus Query: 213 gtaggcctggttataggaggagtccatctcgtgggcgacgaggctggttacagtgacccg 272 |||||| ||||| ||||||||||||||||||||| ||||||| | | | ||||| || Sbjct: 346510 gtaggcttggttgtaggaggagtccatctcgtggacgacgagcttcttggccgtgacgcg 346451 Query: 273 ggcgccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcgg 332 |||| ||||||||||||||||||| | || || |||||||| ||||||||||| || || Sbjct: 346450 cgcgctggtggcgttgttgaagaggaagacgccggcgttggcgtagatggcctccgtggg 346391 Query: 333 atacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatggagtg 392 |||||||| |||||| ||||||||||||| ||| || |||||||| ||||||||||| Sbjct: 346390 gtacacccgcgacgtcgccgtggacctccccccctgcgcgaagctctcgacgatggagtg 346331 Query: 393 gtccaccagcaccc 406 ||| || ||||||| Sbjct: 346330 gtcgacgagcaccc 346317 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Minus Query: 592 tcggcgagcacgagcaggccgaagggtccgagggcgcc 629 ||||||||||| ||||| |||||||| || |||||||| Sbjct: 346134 tcggcgagcaccagcagcccgaaggggcccagggcgcc 346097
>gb|AF276704.1|AF276704 Oryza sativa vacuolar acid invertase (INV3) gene, complete cds Length = 3725 Score = 139 bits (70), Expect = 1e-29 Identities = 163/194 (84%) Strand = Plus / Minus Query: 213 gtaggcctggttataggaggagtccatctcgtgggcgacgaggctggttacagtgacccg 272 |||||| ||||| ||||||||||||||||||||| ||||||| | | | ||||| || Sbjct: 3557 gtaggcttggttgtaggaggagtccatctcgtggacgacgagcttcttggccgtgacgcg 3498 Query: 273 ggcgccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcgg 332 |||| ||||||||||||||||||| | || || |||||||| ||||||||||| || || Sbjct: 3497 cgcgctggtggcgttgttgaagaggaagacgccggcgttggcgtagatggcctccgtggg 3438 Query: 333 atacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatggagtg 392 |||||||| |||||| ||||||||||||| ||| || |||||||| ||||||||||| Sbjct: 3437 gtacacccgcgacgtcgccgtggacctccccccctgcgcgaagctctcgacgatggagtg 3378 Query: 393 gtccaccagcaccc 406 ||| || ||||||| Sbjct: 3377 gtcgacgagcaccc 3364 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Minus Query: 592 tcggcgagcacgagcaggccgaagggtccgagggcgcc 629 ||||||||||| ||||| |||||||| || |||||||| Sbjct: 3181 tcggcgagcaccagcagcccgaaggggcccagggcgcc 3144
>dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1359_D06 Length = 146805 Score = 139 bits (70), Expect = 1e-29 Identities = 163/194 (84%) Strand = Plus / Minus Query: 213 gtaggcctggttataggaggagtccatctcgtgggcgacgaggctggttacagtgacccg 272 |||||| ||||| ||||||||||||||||||||| ||||||| | | | ||||| || Sbjct: 75294 gtaggcttggttgtaggaggagtccatctcgtggacgacgagcttcttggccgtgacgcg 75235 Query: 273 ggcgccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcgg 332 |||| ||||||||||||||||||| | || || |||||||| ||||||||||| || || Sbjct: 75234 cgcgctggtggcgttgttgaagaggaagacgccggcgttggcgtagatggcctccgtggg 75175 Query: 333 atacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatggagtg 392 |||||||| |||||| ||||||||||||| ||| || |||||||| ||||||||||| Sbjct: 75174 gtacacccgcgacgtcgccgtggacctccccccctgcgcgaagctctcgacgatggagtg 75115 Query: 393 gtccaccagcaccc 406 ||| || ||||||| Sbjct: 75114 gtcgacgagcaccc 75101 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Minus Query: 592 tcggcgagcacgagcaggccgaagggtccgagggcgcc 629 ||||||||||| ||||| |||||||| || |||||||| Sbjct: 74918 tcggcgagcaccagcagcccgaaggggcccagggcgcc 74881
>dbj|AK072245.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002K22, full insert sequence Length = 2443 Score = 139 bits (70), Expect = 1e-29 Identities = 163/194 (84%) Strand = Plus / Minus Query: 213 gtaggcctggttataggaggagtccatctcgtgggcgacgaggctggttacagtgacccg 272 |||||| ||||| ||||||||||||||||||||| ||||||| | | | ||||| || Sbjct: 2078 gtaggcttggttgtaggaggagtccatctcgtggacgacgagcttcttggccgtgacgcg 2019 Query: 273 ggcgccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcgg 332 |||| ||||||||||||||||||| | || || |||||||| ||||||||||| || || Sbjct: 2018 cgcgctggtggcgttgttgaagaggaagacgccggcgttggcgtagatggcctccgtggg 1959 Query: 333 atacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatggagtg 392 |||||||| |||||| ||||||||||||| ||| || |||||||| ||||||||||| Sbjct: 1958 gtacacccgcgacgtcgccgtggacctccccccctgcgcgaagctctcgacgatggagtg 1899 Query: 393 gtccaccagcaccc 406 ||| || ||||||| Sbjct: 1898 gtcgacgagcaccc 1885 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Minus Query: 592 tcggcgagcacgagcaggccgaagggtccgagggcgcc 629 ||||||||||| ||||| |||||||| || |||||||| Sbjct: 1702 tcggcgagcaccagcagcccgaaggggcccagggcgcc 1665
>dbj|AB186920.1| Lolium perenne mRNA for putative fructosyltransferase1, complete cds Length = 2268 Score = 137 bits (69), Expect = 5e-29 Identities = 120/137 (87%) Strand = Plus / Minus Query: 273 ggcgccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcgg 332 ||||||||||||||||||||| |||||||||||||| |||| ||||||||||| ||||| Sbjct: 1865 ggcgccggtggcgttgttgaacaggtacaccccagccctggcgtagatggcctccgtcgg 1806 Query: 333 atacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatggagtg 392 ||||| || |||||| ||||| |||||| ||||| || ||||||| ||||||||||| Sbjct: 1805 gtacactcgcgacgtcgccgtgaccctcccacccatcgcgaagctctgcacgatggagtg 1746 Query: 393 gtccaccagcaccctca 409 |||||| |||||||||| Sbjct: 1745 gtccacgagcaccctca 1729
>gb|AF494041.1| Lolium perenne fructan 6-fructosyltransferase mRNA, complete cds Length = 2279 Score = 129 bits (65), Expect = 1e-26 Identities = 119/137 (86%) Strand = Plus / Minus Query: 273 ggcgccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcgg 332 ||||||||||||||||||||| |||||||||||||| |||| ||||||||||| ||||| Sbjct: 1871 ggcgccggtggcgttgttgaacaggtacaccccagccctggcgtagatggcctccgtcgg 1812 Query: 333 atacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatggagtg 392 ||||| || |||||| ||||| |||||| ||||| || ||||| | ||||||||||| Sbjct: 1811 gtacactcgcgacgtcgccgtgaccctcccacccatcgcgaagctttgcacgatggagtg 1752 Query: 393 gtccaccagcaccctca 409 |||||| |||||||||| Sbjct: 1751 gtccacgagcaccctca 1735
>gb|AF069309.1| Triticum aestivum vacuolar invertase (WIVRV) mRNA, partial cds Length = 1840 Score = 127 bits (64), Expect = 5e-26 Identities = 146/172 (84%), Gaps = 1/172 (0%) Strand = Plus / Minus Query: 274 gcgccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcgga 333 |||||||||||||||||||| |||||||| |||||| ||| ||||||||||| |||||| Sbjct: 1380 gcgccggtggcgttgttgaaaaggtacacgccagcggcggcgtagatggcctccgtcgga 1321 Query: 334 tacacccgtgacg-tcaccgtggacctcccgcccattgcaaagctctctacgatggagtg 392 ||||||| || | || | |||||||| || ||||| || |||||||| ||||| ||||| Sbjct: 1320 tacaccctcgatgttcgcggtggaccttccacccatggcgaagctctccacgatcgagtg 1261 Query: 393 gtccaccagcaccctcactgacaggtcctcaccgttcagcaccggcacagtg 444 ||||||||||||||| | || || |||||||||| ||||| ||||||||| Sbjct: 1260 gtccaccagcaccctgagggatagatcctcaccgtcgagcacaggcacagtg 1209
>gb|AY245431.1| Lolium perenne sucrose:sucrose 1-fructosyltransferase mRNA, complete cds Length = 1962 Score = 127 bits (64), Expect = 5e-26 Identities = 142/168 (84%) Strand = Plus / Minus Query: 273 ggcgccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcgg 332 |||||| |||||||||||||||||||| ||||| ||| || ||||||||||| ||||| Sbjct: 1884 ggcgcccgtggcgttgttgaagaggtagacccccgcggccgcgtagatggcctccgtcgg 1825 Query: 333 atacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatggagtg 392 ||| |||| |||||| ||||| |||||||||||| || ||||||| ||||||||||| Sbjct: 1824 gtacgcccgcgacgtcgccgtgatcctcccgcccatcgcgaagctctgcacgatggagtg 1765 Query: 393 gtccaccagcaccctcactgacaggtcctcaccgttcagcaccggcac 440 |||||| ||||||||||| || | | |||||||| ||||||||||| Sbjct: 1764 gtccactagcaccctcaccgaaaaggtctcaccgtcaagcaccggcac 1717
>gb|DQ073970.1| Lolium perenne fructosyltransferase-like protein mRNA, complete cds Length = 1962 Score = 111 bits (56), Expect = 3e-21 Identities = 158/192 (82%) Strand = Plus / Minus Query: 316 tagatggcctcggtcggatacacccgtgacgtcaccgtggacctcccgcccattgcaaag 375 ||||||||||| ||||| || ||||| ||||||||||| |||||||||||||| || ||| Sbjct: 1862 tagatggcctccgtcgggtatacccgcgacgtcaccgttgacctcccgcccatcgcgaag 1803 Query: 376 ctctctacgatggagtggtccaccagcaccctcactgacaggtcctcaccgttcagcacc 435 ||||||||||| || || ||||| |||||||| || || | ||||||||| |||||| Sbjct: 1802 ctctctacgatcgaatgatccacgagcaccctgacagataaagcctcaccgtggagcacc 1743 Query: 436 ggcacagtgttgccaacgaccctcttgacaatgtcattggcacgagacgaacgcgtctcg 495 ||||| ||| |||| || |||| ||| || | ||| ||| |||||||| || | |||| Sbjct: 1742 ggcacggtgctgcccaccacccgcttcaccacgtcccaggcccgagacgagcgggactcg 1683 Query: 496 tcgtggcagaag 507 |||||||||||| Sbjct: 1682 tcgtggcagaag 1671
>emb|AJ563384.1|ZMA563384 Zea mays partial ivr2 gene for vacuolar invertase, exons 1-2 Length = 1978 Score = 109 bits (55), Expect = 1e-20 Identities = 145/175 (82%) Strand = Plus / Minus Query: 232 gagtccatctcgtgggcgacgaggctggttacagtgacccgggcgccggtggcgttgttg 291 ||||||||||||||| ||||||| | || | |||||||| ||| |||||||||||||| Sbjct: 1661 gagtccatctcgtggacgacgagcttcgtggccgtgacccgcgcggcggtggcgttgttg 1602 Query: 292 aagaggtacaccccagcgttggcatagatggcctcggtcggatacacccgtgacgtcacc 351 |||||| | || || |||||||| |||||||||||||| || || || || || || | Sbjct: 1601 aagaggaagacgccggcgttggcgtagatggcctcggtggggtagacgcgcgatgtggcg 1542 Query: 352 gtggacctcccgcccattgcaaagctctctacgatggagtggtccaccagcaccc 406 ||||||||||||||| || |||||||| |||||||||||||| || ||||||| Sbjct: 1541 gtggacctcccgccctgcgcgaagctctcgacgatggagtggtcgacgagcaccc 1487 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 592 tcggcgagcacgagcaggccgaaggg 617 |||||||| ||||||||||||||||| Sbjct: 1307 tcggcgaggacgagcaggccgaaggg 1282
>gb|AY107166.1| Zea mays PCO109921 mRNA sequence Length = 1901 Score = 109 bits (55), Expect = 1e-20 Identities = 145/175 (82%) Strand = Plus / Minus Query: 232 gagtccatctcgtgggcgacgaggctggttacagtgacccgggcgccggtggcgttgttg 291 ||||||||||||||| ||||||| | || | |||||||| ||| |||||||||||||| Sbjct: 1501 gagtccatctcgtggacgacgagcttcgtggccgtgacccgcgcggcggtggcgttgttg 1442 Query: 292 aagaggtacaccccagcgttggcatagatggcctcggtcggatacacccgtgacgtcacc 351 |||||| | || || |||||||| |||||||||||||| || || || || || || | Sbjct: 1441 aagaggaagacgccggcgttggcgtagatggcctcggtggggtagacgcgcgatgtggcg 1382 Query: 352 gtggacctcccgcccattgcaaagctctctacgatggagtggtccaccagcaccc 406 ||||||||||||||| || |||||||| |||||||||||||| || ||||||| Sbjct: 1381 gtggacctcccgccctgcgcgaagctctcgacgatggagtggtcgacgagcaccc 1327 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 592 tcggcgagcacgagcaggccgaaggg 617 |||||||| ||||||||||||||||| Sbjct: 1147 tcggcgaggacgagcaggccgaaggg 1122
>gb|U31451.1|ZMU31451 Zea mays invertase mRNA, partial cds Length = 1530 Score = 109 bits (55), Expect = 1e-20 Identities = 145/175 (82%) Strand = Plus / Minus Query: 232 gagtccatctcgtgggcgacgaggctggttacagtgacccgggcgccggtggcgttgttg 291 ||||||||||||||| ||||||| | || | |||||||| ||| |||||||||||||| Sbjct: 1487 gagtccatctcgtggacgacgagcttcgtggccgtgacccgcgcggcggtggcgttgttg 1428 Query: 292 aagaggtacaccccagcgttggcatagatggcctcggtcggatacacccgtgacgtcacc 351 |||||| | || || |||||||| |||||||||||||| || || || || || || | Sbjct: 1427 aagaggaagacgccggcgttggcgtagatggcctcggtggggtagacgcgcgatgtggcg 1368 Query: 352 gtggacctcccgcccattgcaaagctctctacgatggagtggtccaccagcaccc 406 ||||||||||||||| || |||||||| |||||||||||||| || ||||||| Sbjct: 1367 gtggacctcccgccctgcgcgaagctctcgacgatggagtggtcgacgagcaccc 1313
>gb|AF192394.1|AF192394 Poa secunda sucrose:fructan 6-fructosyltransferase (6-SFT) mRNA, complete cds Length = 2057 Score = 105 bits (53), Expect = 2e-19 Identities = 116/137 (84%) Strand = Plus / Minus Query: 273 ggcgccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcgg 332 ||||||||| ||||||||||| | ||||||||| ||| || ||||| ||||| ||||| Sbjct: 1824 ggcgccggttgcgttgttgaaaacgtacacccctgcggccgcgtagatagcctctgtcgg 1765 Query: 333 atacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatggagtg 392 |||||||| |||||| ||||| |||||||||||| || ||||||| ||||||||||| Sbjct: 1764 gtacacccgcgacgtcgccgtgaccctcccgcccatcgcgaagctctgcacgatggagtg 1705 Query: 393 gtccaccagcaccctca 409 ||| || |||||||||| Sbjct: 1704 gtctacgagcaccctca 1688
>gb|AF492836.1| Lolium perenne putative sucrose:sucrose 1-fructosyltransferase mRNA, complete cds Length = 2508 Score = 101 bits (51), Expect = 3e-18 Identities = 111/131 (84%) Strand = Plus / Minus Query: 283 gcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcggatacacccgt 342 ||||||||||| ||||||||||| || ||| ||||||||||| ||||| || |||| Sbjct: 1897 gcgttgttgaacaggtacacccctgccgcggcgtagatggcctccgtcgggtatgcccgc 1838 Query: 343 gacgtcaccgtggacctcccgcccattgcaaagctctctacgatggagtggtccaccagc 402 || |||||||||| |||||| ||||| | ||||||| ||||||||||||||||| ||| Sbjct: 1837 gatgtcaccgtggtcctcccacccatcacgaagctctgcacgatggagtggtccactagc 1778 Query: 403 accctcactga 413 ||||||||||| Sbjct: 1777 accctcactga 1767
>emb|AJ532550.1|LTE532550 Lolium temulentum mRNA for putative fructan 6-fructosyltransferase (6ft gene) Length = 2331 Score = 101 bits (51), Expect = 3e-18 Identities = 189/235 (80%) Strand = Plus / Minus Query: 273 ggcgccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcgg 332 |||||||||||| |||||||| ||||||||||| || | || ||||||||||| || || Sbjct: 1880 ggcgccggtggcattgttgaacaggtacacccctgccctagcgtagatggcctccgttgg 1821 Query: 333 atacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatggagtg 392 ||||||| || ||| ||||| |||||| ||||| || ||||||| ||||||||||| Sbjct: 1820 gtacaccctcgatgtcgccgtgaccctccctcccatcgcgaagctctgcacgatggagtg 1761 Query: 393 gtccaccagcaccctcactgacaggtcctcaccgttcagcaccggcacagtgttgccaac 452 |||||| |||||||||| |||| |||| |||| ||||||||||| ||| |||| || Sbjct: 1760 gtccacgagcaccctcatcgacaacgcctcgccgtcgagcaccggcaccgtgctgcccac 1701 Query: 453 gaccctcttgacaatgtcattggcacgagacgaacgcgtctcgtcgtggcagaag 507 |||| ||| | ||| ||||| || | ||| ||||||||||||| ||||||| Sbjct: 1700 cacccgcttcgtcacgtccttggcccgtgtcgaccgcgtctcgtcgttgcagaag 1646 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 601 acgagcaggccgaagggtccgagggcgcc 629 ||||||||||||||||| ||||| ||||| Sbjct: 1558 acgagcaggccgaaggggccgagagcgcc 1530
>dbj|AB125218.1| Lolium perenne mRNA for putative fructosyltransferase2, complete cds Length = 2462 Score = 101 bits (51), Expect = 3e-18 Identities = 111/131 (84%) Strand = Plus / Minus Query: 283 gcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcggatacacccgt 342 ||||||||||| ||||||||||| || ||| ||||||||||| ||||| || |||| Sbjct: 1882 gcgttgttgaacaggtacacccctgccgcggcgtagatggcctccgtcgggtatgcccgc 1823 Query: 343 gacgtcaccgtggacctcccgcccattgcaaagctctctacgatggagtggtccaccagc 402 || |||||||||| |||||| ||||| | ||||||| ||||||||||||||||| ||| Sbjct: 1822 gatgtcaccgtggtcctcccacccatcacgaagctctgcacgatggagtggtccactagc 1763 Query: 403 accctcactga 413 ||||||||||| Sbjct: 1762 accctcactga 1752
>gb|AF222937.1| Australopyrum retrofractum sucrose:fructan 6-fructosyltransferase (6-SFT) gene, partial cds Length = 311 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Minus Query: 329 tcggatacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatgg 388 |||| |||||||||||||||| ||||| |||||||||||| ||||||| || ||||||| Sbjct: 213 tcgggtacacccgtgacgtcatcgtggtcctcccgcccatcgcaaagccctgcacgatgg 154 Query: 389 agtggtccaccagcaccctca 409 |||||||||| |||||||||| Sbjct: 153 agtggtccacgagcaccctca 133
>gb|AF222948.1| Pascopyrum smithii sucrose:fructan 6-fructosyltransferase (6-SFT) gene, partial cds Length = 314 Score = 95.6 bits (48), Expect = 2e-16 Identities = 69/76 (90%) Strand = Plus / Minus Query: 334 tacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatggagtgg 393 |||||||||||||||| |||||||||||||||||| || |||| || |||||||||||| Sbjct: 208 tacacccgtgacgtcatcgtggacctcccgcccatcgcgaagccctgcacgatggagtgg 149 Query: 394 tccaccagcaccctca 409 ||||| |||||||||| Sbjct: 148 tccacgagcaccctca 133
>gb|AF222946.1| Triticum timopheevii sucrose:fructan 6-fructosyltransferase (6-SFT) gene, partial cds Length = 311 Score = 95.6 bits (48), Expect = 2e-16 Identities = 96/112 (85%) Strand = Plus / Minus Query: 329 tcggatacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatgg 388 |||| |||||||||||||||| ||||| |||||||||||| || |||| || ||||||| Sbjct: 213 tcgggtacacccgtgacgtcatcgtggtcctcccgcccatggcgaagccctgcacgatgg 154 Query: 389 agtggtccaccagcaccctcactgacaggtcctcaccgttcagcaccggcac 440 |||||||||| |||||||||| ||| | ||||||||| ||||||||||| Sbjct: 153 agtggtccacgagcaccctcattgagaaagcctcaccgtcgagcaccggcac 102
>gb|AF222945.1| Triticum turgidum sucrose:fructan 6-fructosyltransferase (6-SFT) gene, partial cds Length = 311 Score = 89.7 bits (45), Expect = 1e-14 Identities = 72/81 (88%) Strand = Plus / Minus Query: 329 tcggatacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatgg 388 |||| |||||||||||||||| ||||| |||||||||||| || |||| || ||||||| Sbjct: 213 tcgggtacacccgtgacgtcatcgtggtcctcccgcccatcgcgaagccctgcacgatgg 154 Query: 389 agtggtccaccagcaccctca 409 |||||||||| |||||||||| Sbjct: 153 agtggtccacgagcaccctca 133
>gb|AF222941.1| Aegilops tauschii sucrose:fructan 6-fructosyltransferase (6-SFT) gene, partial cds Length = 311 Score = 89.7 bits (45), Expect = 1e-14 Identities = 72/81 (88%) Strand = Plus / Minus Query: 329 tcggatacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatgg 388 |||| |||||||||||||||| ||||| |||||||||||| || |||| || ||||||| Sbjct: 213 tcgggtacacccgtgacgtcatcgtggtcctcccgcccatcgcgaagccctgcacgatgg 154 Query: 389 agtggtccaccagcaccctca 409 |||||||||| |||||||||| Sbjct: 153 agtggtccacgagcaccctca 133
>gb|AF222939.1| Aegilops speltoides sucrose:fructan 6-fructosyltransferase (6-SFT) gene, partial cds Length = 311 Score = 89.7 bits (45), Expect = 1e-14 Identities = 72/81 (88%) Strand = Plus / Minus Query: 329 tcggatacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatgg 388 |||| |||||||||||||||| ||||| |||||||||||| || |||| || ||||||| Sbjct: 213 tcgggtacacccgtgacgtcatcgtggtcctcccgcccatcgcgaagccctgcacgatgg 154 Query: 389 agtggtccaccagcaccctca 409 |||||||||| |||||||||| Sbjct: 153 agtggtccacgagcaccctca 133
>gb|AF222934.1| Thinopyrum bessarabicum sucrose:fructan 6-fructosyltransferase (6-SFT) gene, partial cds Length = 311 Score = 89.7 bits (45), Expect = 1e-14 Identities = 72/81 (88%) Strand = Plus / Minus Query: 329 tcggatacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatgg 388 |||| |||||||||||||||| ||||| |||||||||||| || |||| || ||||||| Sbjct: 213 tcgggtacacccgtgacgtcatcgtggtcctcccgcccatcgcgaagccctgcacgatgg 154 Query: 389 agtggtccaccagcaccctca 409 |||||||||| |||||||||| Sbjct: 153 agtggtccacgagcaccctca 133
>dbj|AB029887.1| Triticum aestivum 6-SFT mRNA for sucrose:fructan 6-fructosyltransferase, complete cds Length = 2220 Score = 89.7 bits (45), Expect = 1e-14 Identities = 72/81 (88%) Strand = Plus / Minus Query: 329 tcggatacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatgg 388 |||| |||||||||||||||| ||||| |||||||||||| || |||| || ||||||| Sbjct: 1752 tcgggtacacccgtgacgtcatcgtggtcctcccgcccatcgcgaagccctgcacgatgg 1693 Query: 389 agtggtccaccagcaccctca 409 |||||||||| |||||||||| Sbjct: 1692 agtggtccacgagcaccctca 1672
>gb|AF252607.1| Psathyrostachys juncea sucrose:fructan 6-fructosyltransferase (6-SFT) mRNA, partial cds Length = 1315 Score = 87.7 bits (44), Expect = 4e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 334 tacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatggagtgg 393 |||||||||||||||| ||||| |||||||||||| ||||||| || |||||||||||| Sbjct: 817 tacacccgtgacgtcatcgtggtcctcccgcccatcgcaaagccctgcacgatggagtgg 758 Query: 394 tccaccagcaccctca 409 ||||| || ||||||| Sbjct: 757 tccacgagtaccctca 742
>gb|AY302083.1| Saccharum hybrid cultivar soluble acid invertase (ShinvA) mRNA, partial cds Length = 2274 Score = 81.8 bits (41), Expect = 3e-12 Identities = 149/185 (80%) Strand = Plus / Minus Query: 220 tggttataggaggagtccatctcgtgggcgacgaggctggttacagtgacccgggcgccg 279 ||||| ||||| ||||||||||||||| ||||||| | | | ||||| || ||| || Sbjct: 1898 tggttgtaggacgagtccatctcgtggacgacgagcttcttggcggtgacgcgcgcggcg 1839 Query: 280 gtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcggatacacc 339 |||||||||||||||||| |||| || |||||||| |||||||||| ||| || || || Sbjct: 1838 gtggcgttgttgaagaggaacacgccggcgttggcgtagatggccttggtggggtagacg 1779 Query: 340 cgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatggagtggtccacc 399 || || || |||| ||||| || ||| || |||||||| |||||||||||||| || Sbjct: 1778 cgcgaggtggccgttgaccttccaccctgcgcgaagctctcgacgatggagtggtcgacg 1719 Query: 400 agcac 404 ||||| Sbjct: 1718 agcac 1714 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 592 tcggcgagcacgagcaggccgaagggtccgagggc 626 |||||||| || |||||||||||||| |||||||| Sbjct: 1535 tcggcgaggacaagcaggccgaaggggccgagggc 1501
>gb|AF481763.1| Lolium perenne fructosyltransferase (FT1) mRNA, complete cds Length = 2386 Score = 81.8 bits (41), Expect = 3e-12 Identities = 110/133 (82%) Strand = Plus / Minus Query: 275 cgccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcggat 334 ||||||||||||||||||| || ||| | || || | ||||||||||||| || || | Sbjct: 1911 cgccggtggcgttgttgaaaagatacgcaccggcagcgccatagatggcctccgttgggt 1852 Query: 335 acacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatggagtggt 394 |||||| || || |||||||||| |||||||| || |||||||| ||||| ||||||| Sbjct: 1851 acaccctcgatgttgccgtggacctgccgcccatggcgaagctctccacgattgagtggt 1792 Query: 395 ccaccagcaccct 407 |||| |||||||| Sbjct: 1791 ccacgagcaccct 1779
>gb|BT009003.1| Triticum aestivum clone wdk2c.pk017.f14:fis, full insert mRNA sequence Length = 1612 Score = 81.8 bits (41), Expect = 3e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 329 tcggatacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatgg 388 |||| |||||||| ||||||| ||||| |||||||||||| || |||| || ||||||| Sbjct: 1273 tcgggtacacccgcgacgtcatcgtggtcctcccgcccatcgcgaagccctgcacgatgg 1214 Query: 389 agtggtccaccagcaccctca 409 |||||||||| |||||||||| Sbjct: 1213 agtggtccacgagcaccctca 1193
>gb|BT008969.1| Triticum aestivum clone wdk1c.pk014.c11:fis, full insert mRNA sequence Length = 1844 Score = 81.8 bits (41), Expect = 3e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 329 tcggatacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatgg 388 |||| |||||||| ||||||| ||||| |||||||||||| || |||| || ||||||| Sbjct: 1347 tcgggtacacccgcgacgtcatcgtggtcctcccgcccatcgcgaagccctgcacgatgg 1288 Query: 389 agtggtccaccagcaccctca 409 |||||||||| |||||||||| Sbjct: 1287 agtggtccacgagcaccctca 1267
>gb|AF211253.1| Agropyron cristatum sucrose:fructan 6-fructosyltransferase (6-SFT) mRNA, complete cds Length = 2174 Score = 81.8 bits (41), Expect = 3e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 329 tcggatacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatgg 388 |||| |||||||||||||||| |||| |||||||||||| || |||| || ||||||| Sbjct: 1793 tcgggtacacccgtgacgtcatcgtgatcctcccgcccatcgcgaagccctgcacgatgg 1734 Query: 389 agtggtccaccagcaccctca 409 |||||||||| |||||||||| Sbjct: 1733 agtggtccacgagcaccctca 1713
>gb|AF222947.1| Triticum aestivum sucrose:fructan 6-fructosyltransferase (6-SFT) gene, partial cds Length = 311 Score = 81.8 bits (41), Expect = 3e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 329 tcggatacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatgg 388 |||| |||||||| ||||||| ||||| |||||||||||| || |||| || ||||||| Sbjct: 213 tcgggtacacccgcgacgtcatcgtggtcctcccgcccatcgcgaagccctgcacgatgg 154 Query: 389 agtggtccaccagcaccctca 409 |||||||||| |||||||||| Sbjct: 153 agtggtccacgagcaccctca 133
>gb|AF222942.1| Secale cereale sucrose:fructan 6-fructosyltransferase (6-SFT) gene, partial cds Length = 311 Score = 81.8 bits (41), Expect = 3e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 329 tcggatacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatgg 388 |||| ||||||||||| |||| ||||| |||||||||||| || |||| || ||||||| Sbjct: 213 tcgggtacacccgtgatgtcatcgtggtcctcccgcccatcgcgaagccctgcacgatgg 154 Query: 389 agtggtccaccagcaccctca 409 |||||||||| |||||||||| Sbjct: 153 agtggtccacgagcaccctca 133
>gb|AF222931.1| Psathyrostachys juncea sucrose:fructan 6-fructosyltransferase (6-SFT) gene, partial cds Length = 311 Score = 81.8 bits (41), Expect = 3e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 329 tcggatacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatgg 388 |||| |||||||||||||||| ||||| |||||||||||| || |||| || ||||||| Sbjct: 213 tcgggtacacccgtgacgtcatcgtggtcctcccgcccatcgcgaagccctgcacgatgg 154 Query: 389 agtggtccaccagcaccctca 409 |||||||||| || ||||||| Sbjct: 153 agtggtccacaagtaccctca 133
>gb|AF222930.1| Agropyron puberulum sucrose:fructan 6-fructosyltransferase (6-SFT) gene, partial cds Length = 311 Score = 81.8 bits (41), Expect = 3e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 329 tcggatacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatgg 388 |||| |||||||||||||||| |||| |||||||||||| || |||| || ||||||| Sbjct: 213 tcgggtacacccgtgacgtcatcgtgatcctcccgcccatcgcgaagccctgcacgatgg 154 Query: 389 agtggtccaccagcaccctca 409 |||||||||| |||||||||| Sbjct: 153 agtggtccacgagcaccctca 133
>gb|AF253410.1| Triticum urartu sucrose:fructan 6-fructosyltransferase gene, partial cds Length = 311 Score = 81.8 bits (41), Expect = 3e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 329 tcggatacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatgg 388 |||| |||||||| ||||||| ||||| |||||||||||| || |||| || ||||||| Sbjct: 213 tcgggtacacccgcgacgtcatcgtggtcctcccgcccatcgcgaagccctgcacgatgg 154 Query: 389 agtggtccaccagcaccctca 409 |||||||||| |||||||||| Sbjct: 153 agtggtccacgagcaccctca 133
>gb|AF062735.1|AF062735 Saccharum officinarum soluble acid invertase mRNA, partial cds Length = 1808 Score = 81.8 bits (41), Expect = 3e-12 Identities = 149/185 (80%) Strand = Plus / Minus Query: 220 tggttataggaggagtccatctcgtgggcgacgaggctggttacagtgacccgggcgccg 279 ||||| ||||| ||||||||||||||| ||||||| | | | ||||| || ||| || Sbjct: 1679 tggttgtaggacgagtccatctcgtggacgacgagcttcttggcggtgacgcgcgcggcg 1620 Query: 280 gtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcggatacacc 339 |||||||||||||||||| |||| || |||||||| |||||||||| ||| || || || Sbjct: 1619 gtggcgttgttgaagaggaacacgccggcgttggcgtagatggccttggtggggtagacg 1560 Query: 340 cgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatggagtggtccacc 399 || || || |||| ||||| || ||| || |||||||| |||||||||||||| || Sbjct: 1559 cgcgaggtggccgttgaccttccaccctgcgcgaagctctcgacgatggagtggtcgacg 1500 Query: 400 agcac 404 ||||| Sbjct: 1499 agcac 1495 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 592 tcggcgagcacgagcaggccgaaggg 617 |||||||| ||||||||||||||||| Sbjct: 1316 tcggcgaggacgagcaggccgaaggg 1291
>gb|AF222929.1| Agropyron mongolicum sucrose:fructan 6-fructosyltransferase (6-SFT) gene, partial cds Length = 311 Score = 79.8 bits (40), Expect = 1e-11 Identities = 67/76 (88%) Strand = Plus / Minus Query: 334 tacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatggagtgg 393 |||||||||||||||| |||| |||||||||||| || |||| || |||||||||||| Sbjct: 208 tacacccgtgacgtcatcgtgatcctcccgcccatcgcgaagccctgcacgatggagtgg 149 Query: 394 tccaccagcaccctca 409 ||||| |||||||||| Sbjct: 148 tccacgagcaccctca 133
>gb|AF222940.1| Aegilops caudata sucrose:fructan 6-fructosyltransferase (6-SFT) gene, partial cds Length = 311 Score = 73.8 bits (37), Expect = 6e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 329 tcggatacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatgg 388 |||| |||||||| || |||| ||||| |||||||||||| || |||| || ||||||| Sbjct: 213 tcgggtacacccgcgaggtcatcgtggtcctcccgcccatcgcgaagccctgcacgatgg 154 Query: 389 agtggtccaccagcaccctca 409 |||||||||| |||||||||| Sbjct: 153 agtggtccacgagcaccctca 133
>gb|AF222936.1| Pseudoroegneria stipifolia sucrose:fructan 6-fructosyltransferase (6-SFT) gene, partial cds Length = 311 Score = 73.8 bits (37), Expect = 6e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 329 tcggatacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatgg 388 |||| |||||||| || |||| ||||||||||||||||| || ||||||| ||||||| Sbjct: 213 tcgggtacacccgcgaagtcattgtggacctcccgcccatcgcgaagctctgcacgatgg 154 Query: 389 agtggtccaccagcaccctca 409 |||||||||| || ||||||| Sbjct: 153 agtggtccacgagaaccctca 133
>gb|AF222933.1| Psathyrostachys huashanica sucrose:fructan 6-fructosyltransferase (6-SFT) gene, partial cds Length = 311 Score = 73.8 bits (37), Expect = 6e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 329 tcggatacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatgg 388 |||| |||||||||||||||| |||| |||||||||||| || |||| || ||||||| Sbjct: 213 tcgggtacacccgtgacgtcatagtggtcctcccgcccatcgcgaagccctgcacgatgg 154 Query: 389 agtggtccaccagcaccctca 409 |||||||||| || ||||||| Sbjct: 153 agtggtccacgagtaccctca 133
>gb|AF253411.1| Critesion violaceum sucrose:fructan 6-fructosyltransferase gene, partial cds Length = 311 Score = 73.8 bits (37), Expect = 6e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 329 tcggatacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatgg 388 |||| |||||||| || |||| ||||| |||||||||||| || |||| || ||||||| Sbjct: 213 tcgggtacacccgagaagtcatcgtggtcctcccgcccatcgcgaagccctgcacgatgg 154 Query: 389 agtggtccaccagcaccctca 409 |||||||||| |||||||||| Sbjct: 153 agtggtccacaagcaccctca 133
>dbj|AB159786.1| Triticum aestivum 1-SST gene for sucrose:sucrose 1-fructosyltransferase, complete cds Length = 3326 Score = 73.8 bits (37), Expect = 6e-10 Identities = 214/273 (78%) Strand = Plus / Minus Query: 276 gccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcggata 335 |||||||||||||||||| | ||| ||||| || || ||||||||||||||||| || Sbjct: 3233 gccggtggcgttgttgaacatgtagacccccgctgccgcgtagatggcctcggtcgggta 3174 Query: 336 cacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatggagtggtc 395 | ||| ||||| | || ||||||||||||| || ||||||| || ||||||||||| Sbjct: 3173 cgccctcgacgttgctgtcaacctcccgcccatcgcgaagctctgcacaatggagtggtc 3114 Query: 396 caccagcaccctcactgacaggtcctcaccgttcagcaccggcacagtgttgccaacgac 455 ||| |||||||| || || | || || |||| ||||| ||||| ||| | || || || Sbjct: 3113 cacgagcaccctaacggaaaaatcttcgccgtcgagcactggcaccgtgctacccaccac 3054 Query: 456 cctcttgacaatgtcattggcacgagacgaacgcgtctcgtcgtggcagaagtgtgtgcg 515 || ||| || | |||| | ||| | ||||| ||| |||||||||||||||||| || || Sbjct: 3053 ccgcttcaccacgtcactagcatgcgacgagcgcaactcgtcgtggcagaagtgagtccg 2994 Query: 516 catgcctccgtcgaggcccctcgatacatagaa 548 | || |||||||||||| | || |||||||| Sbjct: 2993 aagaccaccgtcgaggcccttggacacatagaa 2961
>dbj|AB029888.1| Triticum aestivum 1-SST mRNA for sucrose:sucrose 1-fructosytransferase, complete cds Length = 2330 Score = 73.8 bits (37), Expect = 6e-10 Identities = 214/273 (78%) Strand = Plus / Minus Query: 276 gccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcggata 335 |||||||||||||||||| | ||| ||||| || || ||||||||||||||||| || Sbjct: 1951 gccggtggcgttgttgaacatgtagacccccgctgccgcgtagatggcctcggtcgggta 1892 Query: 336 cacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatggagtggtc 395 | ||| ||||| | || ||||||||||||| || ||||||| || ||||||||||| Sbjct: 1891 cgccctcgacgttgctgtcaacctcccgcccatcgcgaagctctgcacaatggagtggtc 1832 Query: 396 caccagcaccctcactgacaggtcctcaccgttcagcaccggcacagtgttgccaacgac 455 ||| |||||||| || || | || || |||| ||||| ||||| ||| | || || || Sbjct: 1831 cacgagcaccctaacggaaaaatcttcgccgtcgagcactggcaccgtgctacccaccac 1772 Query: 456 cctcttgacaatgtcattggcacgagacgaacgcgtctcgtcgtggcagaagtgtgtgcg 515 || ||| || | |||| | ||| | ||||| ||| |||||||||||||||||| || || Sbjct: 1771 ccgcttcaccacgtcactagcatgcgacgagcgcaactcgtcgtggcagaagtgagtccg 1712 Query: 516 catgcctccgtcgaggcccctcgatacatagaa 548 | || |||||||||||| | || |||||||| Sbjct: 1711 aagaccaccgtcgaggcccttggacacatagaa 1679
>gb|AF083856.1|AF083856 Saccharum hybrid cultivar H65-7052 soluble acid invertase (scinvh3'2) mRNA, partial cds Length = 1402 Score = 73.8 bits (37), Expect = 6e-10 Identities = 148/185 (80%) Strand = Plus / Minus Query: 220 tggttataggaggagtccatctcgtgggcgacgaggctggttacagtgacccgggcgccg 279 ||||| ||||| ||||||||||||||| ||||||| | | | ||||| || || || Sbjct: 1006 tggttgtaggacgagtccatctcgtggacgacgagcttcttggcggtgacgcgcacggcg 947 Query: 280 gtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcggatacacc 339 |||||||||||||||||| |||| || |||||||| |||||||||| ||| || || || Sbjct: 946 gtggcgttgttgaagaggaacacgccggcgttggcgtagatggccttggtggggtagacg 887 Query: 340 cgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatggagtggtccacc 399 || || || |||| ||||| || ||| || |||||||| |||||||||||||| || Sbjct: 886 cgcgaggtggccgttgaccttccaccctgcgcgaagctctcgacgatggagtggtcgacg 827 Query: 400 agcac 404 ||||| Sbjct: 826 agcac 822 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 592 tcggcgagcacgagcaggccgaagggtccgagggc 626 |||||||| ||||||||||||||||| |||||||| Sbjct: 643 tcggcgaggacgagcaggccgaaggggccgagggc 609
>emb|X83233.1|HVSF6FT Hordeum vulgare mRNA for sucrose:fructan 6-fructosyltransferase Length = 2091 Score = 71.9 bits (36), Expect = 2e-09 Identities = 93/112 (83%) Strand = Plus / Minus Query: 329 tcggatacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatgg 388 |||| |||||||| || |||| ||||| |||||||||||| | |||| || ||||||| Sbjct: 1759 tcgggtacacccgcgaggtcatcgtggtcctcccgcccatgtcgaagccctgcacgatgg 1700 Query: 389 agtggtccaccagcaccctcactgacaggtcctcaccgttcagcaccggcac 440 |||| ||||| |||||||||| ||||| ||||||||| ||||||||||| Sbjct: 1699 agtgatccacgagcaccctcattgacaaagcctcaccgtcgagcaccggcac 1648
>gb|AF062734.1|AF062734 Saccharum robustum soluble acid invertase mRNA, partial cds Length = 1808 Score = 69.9 bits (35), Expect = 1e-08 Identities = 147/185 (79%) Strand = Plus / Minus Query: 220 tggttataggaggagtccatctcgtgggcgacgaggctggttacagtgacccgggcgccg 279 ||||| ||||| ||||||||||||||| ||||||| | | | ||||| || ||| || Sbjct: 1679 tggttgtaggacgagtccatctcgtggacgacgagcttcttggcggtgacgcgcgcggcg 1620 Query: 280 gtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcggatacacc 339 |||||||||||||||||| |||| || |||||||| || ||||||| ||| || || || Sbjct: 1619 gtggcgttgttgaagaggaacacgccggcgttggcgtaaatggccttggtggggtagacg 1560 Query: 340 cgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatggagtggtccacc 399 || || || |||| ||||| || ||| || || ||||| |||||||||||||| || Sbjct: 1559 cgcgaggtggccgttgaccttccaccctgcgcgaarctctcgacgatggagtggtcgacg 1500 Query: 400 agcac 404 ||||| Sbjct: 1499 agcac 1495 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 592 tcggcgagcacgagcaggccgaaggg 617 |||||||| ||||||||||||||||| Sbjct: 1316 tcggcgaggacgagcaggccgaaggg 1291
>emb|AJ532551.1|LTE532551 Lolium temulentum partial mRNA for putative soluble acid invertase (inv1:2 gene) Length = 1998 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 316 tagatggcctcggtcggatacacccgtgacgtcaccgtggacctcccgcccattgcaaag 375 ||||| ||||| ||||| ||||||| |||||| | |||||||| || ||||| | ||| Sbjct: 1482 tagatagcctccgtcgggtacaccctcgacgtcgctgtggaccttcctcccatgacgaag 1423 Query: 376 ctctctacgatggagtggtccaccagcaccctca 409 ||||| ||||| ||||||||||| |||||||||| Sbjct: 1422 ctctccacgattgagtggtccacgagcaccctca 1389
>gb|AF222944.1| Heteranthelium piliferum sucrose:fructan 6-fructosyltransferase (6-SFT) gene, partial cds Length = 311 Score = 65.9 bits (33), Expect = 2e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 329 tcggatacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatgg 388 |||| |||||||| || |||| ||| | |||||||||||| || |||| || ||||||| Sbjct: 213 tcgggtacacccgcgaggtcatcgtcgtcctcccgcccatggcgaagccctgcacgatgg 154 Query: 389 agtggtccaccagcaccctca 409 |||||||||| |||||||||| Sbjct: 153 agtggtccacgagcaccctca 133
>gb|AF222935.1| Pseudoroegneria spicata sucrose:fructan 6-fructosyltransferase (6-SFT) gene, partial cds Length = 311 Score = 65.9 bits (33), Expect = 2e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 329 tcggatacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatgg 388 |||| |||||||| || |||| ||||||||||| ||||| || ||||||| ||||||| Sbjct: 213 tcgggtacacccgcgaagtcattgtggacctcccacccatcgcgaagctctgcacgatgg 154 Query: 389 agtggtccaccagcaccctca 409 |||||||||| || ||||||| Sbjct: 153 agtggtccacgagtaccctca 133
>gb|AF222932.1| Psathyrostachys fragilis sucrose:fructan 6-fructosyltransferase (6-SFT) gene, partial cds Length = 311 Score = 65.9 bits (33), Expect = 2e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 329 tcggatacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatgg 388 |||| ||||| |||||||||| |||| |||||||||||| || |||| || ||||||| Sbjct: 213 tcgggtacactcgtgacgtcatagtggtcctcccgcccatcgcgaagccctgcacgatgg 154 Query: 389 agtggtccaccagcaccctca 409 |||||||||| || ||||||| Sbjct: 153 agtggtccacgagtaccctca 133
>emb|AJ567377.2|HVU567377 Hordeum vulgare partial mRNA for sucrose-sucrose-1-fructosyltransferase (1-sst gene) Length = 2157 Score = 65.9 bits (33), Expect = 2e-07 Identities = 132/165 (80%) Strand = Plus / Minus Query: 276 gccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcggata 335 ||||||||| |||||||| ||||| ||||| || |||||||||||||||||||| || Sbjct: 1824 gccggtggcattgttgaacaggtagacccccgccgccgcatagatggcctcggtcgggta 1765 Query: 336 cacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatggagtggtc 395 | ||| |||||| ||| ||||||| ||||| || ||||| | || |||||||||| Sbjct: 1764 cgccctcgacgtcgtcgtcaacctcccacccatcgcgaagctttggacactggagtggtc 1705 Query: 396 caccagcaccctcactgacaggtcctcaccgttcagcaccggcac 440 ||| ||||||| || || | |||||| |||| ||||||||||| Sbjct: 1704 cacgagcacccggacagaaaagtcctcgccgtcgagcaccggcac 1660
>gb|AY023475.1| Oryza sativa microsatellite MRG5800 containing (TCT)X8, closest to marker C1357, genomic sequence Length = 224 Score = 63.9 bits (32), Expect = 6e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 213 gtaggcctggttataggaggagtccatctcgtgggcgacgaggctggttacagtgacccg 272 |||||| ||||| ||||||||||||||||||||| ||||||| | | | ||||| || Sbjct: 84 gtaggcttggttgtaggaggagtccatctcgtggacgacgagcttcttggccgtgacgcg 25 Query: 273 ggcgccggtggcgttgttgaagag 296 |||| |||||||||||||||||| Sbjct: 24 cgcgctggtggcgttgttgaagag 1
>gb|AF222943.1| Haynaldia villosa sucrose:fructan 6-fructosyltransferase (6-SFT) gene, partial cds Length = 311 Score = 63.9 bits (32), Expect = 6e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 334 tacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatggagtgg 393 |||||||| ||||||| ||| | |||||||||||| || |||| || || ||||||||| Sbjct: 208 tacacccgcgacgtcatcgtcgtcctcccgcccatggcgaagccctgcacaatggagtgg 149 Query: 394 tccaccagcaccctca 409 ||||| |||||||||| Sbjct: 148 tccacgagcaccctca 133
>dbj|AB088410.1| Triticum aestivum 1-FFT-B mRNA for fructan:fructan 1-fructosyltransferase, complete cds Length = 2251 Score = 63.9 bits (32), Expect = 6e-07 Identities = 134/168 (79%) Strand = Plus / Minus Query: 273 ggcgccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcgg 332 ||||| |||||| |||||||| ||||| ||||| || || || |||||||| ||||| Sbjct: 1902 ggcgctggtggcattgttgaacaggtagacccccgccgccgcgtaaatggcctccgtcgg 1843 Query: 333 atacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatggagtg 392 ||| ||| |||||| |||| |||||||||||| | ||||||| ||||||||||| Sbjct: 1842 gtacgccctcgacgtcgccgtcatcctcccgcccatgacgaagctctgcacgatggagtg 1783 Query: 393 gtccaccagcaccctcactgacaggtcctcaccgttcagcaccggcac 440 |||||| |||||||| || || | ||||| |||| ||||||||||| Sbjct: 1782 gtccacgagcaccctaacggaaaaatcctcgccgtcgagcaccggcac 1735
>dbj|AB088409.1| Triticum aestivum 1-FFT-A mRNA for fructan:fructan 1-fructosyltransferase, complete cds Length = 2304 Score = 61.9 bits (31), Expect = 2e-06 Identities = 109/135 (80%) Strand = Plus / Minus Query: 273 ggcgccggtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcgg 332 |||||||||||| |||||||| ||||| ||||| || || || |||||||| ||||| Sbjct: 1941 ggcgccggtggcattgttgaacaggtagacccccgccgccgcgtaaatggcctccgtcgg 1882 Query: 333 atacacccgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatggagtg 392 || ||| ||| ||| |||| |||||||||||| | ||||||| ||||||||||| Sbjct: 1881 gtaggcccttgatgtcgccgtcatcctcccgcccatcacgaagctctgcacgatggagtg 1822 Query: 393 gtccaccagcaccct 407 |||||| |||||||| Sbjct: 1821 gtccacgagcaccct 1807
>gb|AF252608.1| Pascopyrum smithii sucrose:fructan 6-fructosyltransferase (6-SFT) mRNA, partial cds Length = 1294 Score = 58.0 bits (29), Expect = 4e-05 Identities = 67/77 (87%), Gaps = 2/77 (2%) Strand = Plus / Minus Query: 334 tacacccgtgacgtcac-cgtggacctcccgcccattgcaaagctctctacgatggagtg 392 |||||||| ||||||| |||||||||||| ||||| || |||| || ||||||||||| Sbjct: 817 tacacccgcgacgtcattcgtggacctccc-cccatcgcgaagccctgcacgatggagtg 759 Query: 393 gtccaccagcaccctca 409 |||||| |||||||||| Sbjct: 758 gtccacgagcaccctca 742
>emb|AJ297369.1|FAR297369 Festuca arundinacea mRNA for sucrose:sucrose 1-fructosyltransferase (1-SST gene) Length = 2045 Score = 58.0 bits (29), Expect = 4e-05 Identities = 128/161 (79%) Strand = Plus / Minus Query: 280 gtggcgttgttgaagaggtacaccccagcgttggcatagatggcctcggtcggatacacc 339 |||||||||||||||||||| || || || || ||||| ||||| ||||| ||| || Sbjct: 1880 gtggcgttgttgaagaggtagactcccgccgctgcgtagatagcctcagtcgggtacgcc 1821 Query: 340 cgtgacgtcaccgtggacctcccgcccattgcaaagctctctacgatggagtggtccacc 399 || || ||| |||| |||||| ||||| || ||||||| || |||||||||||||| Sbjct: 1820 cgcgatgtcgccgtaatcctcccacccatcgcgaagctctgcacaatggagtggtccact 1761 Query: 400 agcaccctcactgacaggtcctcaccgttcagcaccggcac 440 || |||||||| || | | |||||||| ||||||||||| Sbjct: 1760 agaaccctcaccgagaaggtctcaccgtcaagcaccggcac 1720
>gb|AF222938.1| Bromus tectorum sucrose:fructan 6-fructosyltransferase (6-SFT) gene, partial cds Length = 314 Score = 56.0 bits (28), Expect = 1e-04 Identities = 151/192 (78%) Strand = Plus / Minus Query: 316 tagatggcctcggtcggatacacccgtgacgtcaccgtggacctcccgcccattgcaaag 375 ||||||||||| | || |||||||| || |||| |||| |||||||||||| || ||| Sbjct: 226 tagatggcctccatggggtacacccgggaggtcatggtggtcctcccgcccatggcgaag 167 Query: 376 ctctctacgatggagtggtccaccagcaccctcactgacaggtcctcaccgttcagcacc 435 | || || ||||||||||| || |||||||||| || | | |||| |||| |||||| Sbjct: 166 ccctgcacaatggagtggtcgacgagcaccctcatcgaaaaggcctcgccgtcgagcacc 107 Query: 436 ggcacagtgttgccaacgaccctcttgacaatgtcattggcacgagacgaacgcgtctcg 495 ||||| ||| | || | ||||| |||| | ||| |||| || ||||| ||||||||| Sbjct: 106 ggcacggtgctcccgatgacccgcttggtcacgtctctggcgcgcgacgaccgcgtctcg 47 Query: 496 tcgtggcagaag 507 || ||||||||| Sbjct: 46 tcctggcagaag 35
>gb|AY037938.2| Ipomoea batatas soluble acid invertase Ib2FRUCT3 (Ibbfruct3) mRNA, complete cds Length = 2202 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 370 gcaaagctctctacgatggagtggtccacca 400 ||||||||||||||||| ||||||||||||| Sbjct: 1811 gcaaagctctctacgatcgagtggtccacca 1781
>gb|AF171874.1|AF171874 Zea mays soluble acid invertase IVR1 (Ivr1) mRNA, partial sequence Length = 1880 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 370 gcaaagctctctacgatggagtggtccaccag 401 ||||||||||| |||||||||||||| ||||| Sbjct: 1699 gcaaagctctccacgatggagtggtcaaccag 1668
>gb|AY110086.1| Zea mays CL1418_1 mRNA sequence Length = 2267 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 370 gcaaagctctctacgatggagtggtccaccag 401 ||||||||||| |||||||||||||| ||||| Sbjct: 1834 gcaaagctctccacgatggagtggtcaaccag 1803
>gb|AC175059.2| Pan troglodytes BAC clone CH251-777D16 from chromosome y, complete sequence Length = 166448 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 126 gaggagaaaatcagaaaggaaatt 149 |||||||||||||||||||||||| Sbjct: 8919 gaggagaaaatcagaaaggaaatt 8896
>emb|BX322655.10| Zebrafish DNA sequence from clone DKEYP-53E12 in linkage group 8, complete sequence Length = 184723 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 71 cttgacaatgaatagacataataaaaa 97 |||||||||||||||||| |||||||| Sbjct: 117622 cttgacaatgaatagacagaataaaaa 117648
>emb|AJ563423.1|ZMA563423 Zea mays partial ivr2b pseudogene Length = 7411 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Minus Query: 352 gtggacctcccgcccattgcaaagctctctacgatggagtggtccaccagcaccc 406 |||||||| |||||| || |||||||| |||||||||||||| || ||||||| Sbjct: 6496 gtggaccttccgccctgcgcgaagctctcgacgatggagtggtcgacgagcaccc 6442 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 592 tcggcgagcacgagcaggccgaaggg 617 |||||||| ||||||||||||||||| Sbjct: 6286 tcggcgaggacgagcaggccgaaggg 6261
>gb|AF002656.1|AF002656 Asparagus officinalis acid invertase mRNA, complete cds Length = 2388 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 370 gcaaagctctctacgatggagtggtccacca 400 ||||||||||| ||||| ||||||||||||| Sbjct: 1847 gcaaagctctccacgatcgagtggtccacca 1817 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 595 gcgagcacgagcaggccgaagggtccgag 623 |||||||||||||||||||| || ||||| Sbjct: 1634 gcgagcacgagcaggccgaacggcccgag 1606
>gb|BT013073.1| Lycopersicon esculentum clone 114330R, mRNA sequence Length = 853 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 328 gtcggatacacccgtgacgtcaccgt 353 ||||||| |||||||||||||||||| Sbjct: 340 gtcggatccacccgtgacgtcaccgt 365
>gb|AC146108.3| Pan troglodytes BAC clone RP43-22F10 from 7, complete sequence Length = 230349 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 81 aatagacataataaaaatgaaaaggg 106 |||||||||||||||||||| ||||| Sbjct: 190751 aatagacataataaaaatgataaggg 190726
>gb|AC115119.5| Mus musculus BAC clone RP23-87M19 from 18, complete sequence Length = 174491 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 144 gaaattacacatatatgtatat 165 |||||||||||||||||||||| Sbjct: 96886 gaaattacacatatatgtatat 96907
>ref|XM_960923.1| Plasmodium falciparum 3D7 hypothetical protein (PFF0125c) partial mRNA Length = 3894 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 88 ataataaaaatgaaaagggaaa 109 |||||||||||||||||||||| Sbjct: 1424 ataataaaaatgaaaagggaaa 1445
>emb|AL360272.23| Human DNA sequence from clone RP11-169I2 on chromosome 6 Contains the 3' end of the SUPT3H gene for suppressor of Ty 3 homolog (S. cerevisiae), complete sequence Length = 110382 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 129 gagaaaatcagaaaggaaatta 150 |||||||||||||||||||||| Sbjct: 14363 gagaaaatcagaaaggaaatta 14384
>emb|AL133420.28| Human DNA sequence from clone RP5-904D7 on chromosome 20 Contains ESTs, STSs and GSSs, complete sequence Length = 84722 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 149 tacacatatatgtatatgctat 170 |||||||||||||||||||||| Sbjct: 15368 tacacatatatgtatatgctat 15347
>emb|CR382398.1| Plasmodium falciparum chromosome 6, complete sequence; segment 1/5 Length = 349418 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 88 ataataaaaatgaaaagggaaa 109 |||||||||||||||||||||| Sbjct: 110238 ataataaaaatgaaaagggaaa 110217
>gb|AC068991.28| Homo sapiens 12 BAC RP11-300D9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 173639 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 129 gagaaaatcagaaaggaaatta 150 |||||||||||||||||||||| Sbjct: 19697 gagaaaatcagaaaggaaatta 19718
>gb|AC091639.5| Homo sapiens chromosome 8, clone RP11-61K18, complete sequence Length = 147480 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 146 aattacacatatatgtatatgc 167 |||||||||||||||||||||| Sbjct: 47094 aattacacatatatgtatatgc 47115
>gb|AC025828.3|AC025828 Homo sapiens, clone RP11-13I24, complete sequence Length = 152843 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 146 aattacacatatatgtatatgc 167 |||||||||||||||||||||| Sbjct: 149559 aattacacatatatgtatatgc 149538
>emb|BX664611.6| Mouse DNA sequence from clone RP24-201C13 on chromosome X, complete sequence Length = 59966 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 90 aataaaaatgaaaagggaaaca 111 |||||||||||||||||||||| Sbjct: 22332 aataaaaatgaaaagggaaaca 22311
>gb|AC007065.5|AC007065 Homo sapiens, clone hRPK.58_A_1, complete sequence Length = 169325 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 129 gagaaaatcagaaaggaaatta 150 |||||||||||||||||||||| Sbjct: 15429 gagaaaatcagaaaggaaatta 15450
>dbj|AP005361.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1538E2, complete sequence Length = 65355 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 146 aattacacatatatgtatatgc 167 |||||||||||||||||||||| Sbjct: 27123 aattacacatatatgtatatgc 27102
>gb|U16123.1|ZMU16123 Zea mays invertase (Ivr1) gene, complete cds Length = 4233 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 370 gcaaagctctctacgatggagtggtc 395 ||||||||||| |||||||||||||| Sbjct: 3829 gcaaagctctccacgatggagtggtc 3804
>emb|AJ293475.1|SHY293475 Saccharum hybrid cultivar R570 microsatellite DNA, clone mSSCIR2 Length = 384 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 370 gcaaagctctctacgatggagtggtc 395 ||||||||||| |||||||||||||| Sbjct: 36 gcaaagctctccacgatggagtggtc 61
>emb|AJ401339.1|SHY401339 Saccharum hybrid cultivar R570 microsatellite DNA, clone mSSCIR62 Length = 376 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 370 gcaaagctctctacgatggagtggtc 395 ||||||||||| |||||||||||||| Sbjct: 36 gcaaagctctccacgatggagtggtc 61
>gb|AC101748.7| Mus musculus chromosome 5, clone RP24-133H21, complete sequence Length = 168366 Score = 42.1 bits (21), Expect = 2.2 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 136 tcagaaaggaaattacacatatatgtata 164 ||||||||||||| ||||||||||||||| Sbjct: 108582 tcagaaaggaaat-acacatatatgtata 108609
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 80 gaatagacataataaaaatgaaaag 104 ||||| ||||||||||||||||||| Sbjct: 11690289 gaataaacataataaaaatgaaaag 11690265
>emb|CR759875.6| Zebrafish DNA sequence from clone DKEY-274K22 in linkage group 1, complete sequence Length = 216255 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 503 agaagtgtgtgcgcatgcctc 523 ||||||||||||||||||||| Sbjct: 37470 agaagtgtgtgcgcatgcctc 37450
>gb|AC118674.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0093J20, from chromosome 3, complete sequence Length = 148635 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 80 gaatagacataataaaaatgaaaag 104 ||||| ||||||||||||||||||| Sbjct: 79384 gaataaacataataaaaatgaaaag 79360
>emb|CR405706.7| Zebrafish DNA sequence from clone CH211-233D12 in linkage group 1, complete sequence Length = 181249 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 503 agaagtgtgtgcgcatgcctc 523 ||||||||||||||||||||| Sbjct: 128194 agaagtgtgtgcgcatgcctc 128174
>emb|BX936325.9| Zebrafish DNA sequence from clone CH211-74P16 in linkage group 1, complete sequence Length = 185075 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 503 agaagtgtgtgcgcatgcctc 523 ||||||||||||||||||||| Sbjct: 123093 agaagtgtgtgcgcatgcctc 123113
>gb|AC066593.4| Homo sapiens chromosome 3 clone RP11-344O5 map 3p, complete sequence Length = 165873 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 tgaatagacataataaaaatg 99 ||||||||||||||||||||| Sbjct: 59404 tgaatagacataataaaaatg 59384
>gb|AC021105.13| Homo sapiens BAC clone RP11-163O17 from 4, complete sequence Length = 187360 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 140 aaaggaaattacacatatatg 160 ||||||||||||||||||||| Sbjct: 26981 aaaggaaattacacatatatg 27001
>gb|AC158399.2| Mus musculus BAC clone RP23-246A2 from chromosome 14, complete sequence Length = 198948 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 tacacatatatgtatatgcta 169 ||||||||||||||||||||| Sbjct: 52520 tacacatatatgtatatgcta 52500
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 80 gaatagacataataaaaatgaaaag 104 ||||| ||||||||||||||||||| Sbjct: 11687052 gaataaacataataaaaatgaaaag 11687028
>emb|BX294653.11| Zebrafish DNA sequence from clone CH211-196H24 in linkage group 20, complete sequence Length = 208836 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 agacataataaaaatgaaaag 104 ||||||||||||||||||||| Sbjct: 86937 agacataataaaaatgaaaag 86917
>emb|AJ277858.1|MTR277858 Medicago truncatula nod25 gene for nodulin 25, exons 1-13 Length = 10581 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 aaattacacatatatgtatat 165 ||||||||||||||||||||| Sbjct: 3963 aaattacacatatatgtatat 3983
>dbj|AB104414.1| Cucumis melo GeAAT-2 mRNA for alcohol acyltransferase, complete cds Length = 1567 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 78 atgaatagacataataaaaat 98 ||||||||||||||||||||| Sbjct: 1263 atgaatagacataataaaaat 1283
>gb|AC126020.4| Mus musculus BAC clone RP24-364O7 from 8, complete sequence Length = 179287 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 135 atcagaaaggaaattacacatatat 159 |||||||||||||||| |||||||| Sbjct: 81322 atcagaaaggaaattaaacatatat 81298
>gb|AC147720.1| Gallus gallus BAC clone CH261-46I14 from chromosome unknown, complete sequence Length = 204711 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 ttgacaatgaatagacataat 92 ||||||||||||||||||||| Sbjct: 109228 ttgacaatgaatagacataat 109208
>gb|AC123689.8| Mus musculus chromosome 15, clone RP23-321P10, complete sequence Length = 218071 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 150 acacatatatgtatatgctat 170 ||||||||||||||||||||| Sbjct: 166156 acacatatatgtatatgctat 166176
>gb|AC157602.8| Mus musculus chromosome 15 clone RP23-104H10, complete sequence Length = 211648 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 acacatatatgtatatgctat 170 ||||||||||||||||||||| Sbjct: 161076 acacatatatgtatatgctat 161056
>emb|AL845290.7| Mouse DNA sequence from clone RP23-201A19 on chromosome 2, complete sequence Length = 146005 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 aaatgaaaagggaaacaaaga 115 ||||||||||||||||||||| Sbjct: 4750 aaatgaaaagggaaacaaaga 4770
>emb|AL840623.10| Mouse DNA sequence from clone RP23-289L17 on chromosome 4, complete sequence Length = 112610 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 aaattacacatatatgtatat 165 ||||||||||||||||||||| Sbjct: 18204 aaattacacatatatgtatat 18224
>gb|AC109157.10| Mus musculus chromosome 7, clone RP24-169M16, complete sequence Length = 164968 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 90 aataaaaatgaaaagggaaacaaagata 117 |||||||||||| | ||||||||||||| Sbjct: 41306 aataaaaatgaatatggaaacaaagata 41333
>ref|XM_526131.1| PREDICTED: Pan troglodytes similar to Fanconi anemia, complementation group D2 (LOC470748), mRNA Length = 2469 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 gtgacgtcaccgtggacctc 360 |||||||||||||||||||| Sbjct: 1994 gtgacgtcaccgtggacctc 2013
>gb|AC113600.19| Mus musculus chromosome 6, clone RP23-110A19, complete sequence Length = 212705 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 acataataaaaatgaaaagg 105 |||||||||||||||||||| Sbjct: 201500 acataataaaaatgaaaagg 201519
>gb|AC099621.12| Mus musculus chromosome 15, clone RP23-468J2, complete sequence Length = 178810 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 aaaaatgaaaagggaaacaa 112 |||||||||||||||||||| Sbjct: 142411 aaaaatgaaaagggaaacaa 142430
>emb|CT009713.8| Mouse DNA sequence from clone RP23-151C6 on chromosome 13, complete sequence Length = 217752 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 attacacatatatgtatatg 166 |||||||||||||||||||| Sbjct: 75763 attacacatatatgtatatg 75782
>gb|AC116656.5| Mus musculus BAC clone RP23-10A7 from chromosome 15, complete sequence Length = 198019 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 aaaaatgaaaagggaaacaa 112 |||||||||||||||||||| Sbjct: 108989 aaaaatgaaaagggaaacaa 108970
>gb|AC121974.3| Mus musculus BAC clone RP24-285E14 from chromosome 16, complete sequence Length = 159535 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 aaatgaaaagggaaacaaag 114 |||||||||||||||||||| Sbjct: 56953 aaatgaaaagggaaacaaag 56934
>gb|AC108945.4| Mus musculus BAC clone RP23-119J11 from 15, complete sequence Length = 200294 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 gcctggttataggaggagtc 236 |||||||||||||||||||| Sbjct: 53135 gcctggttataggaggagtc 53116
>gb|AC110374.3| Mus musculus BAC clone RP23-293P18 from 15, complete sequence Length = 199869 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 gcctggttataggaggagtc 236 |||||||||||||||||||| Sbjct: 9207 gcctggttataggaggagtc 9226
>gb|AC117598.7| Mus musculus chromosome 1, clone RP23-398H16, complete sequence Length = 196300 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aaaatcagaaaggaaattac 151 |||||||||||||||||||| Sbjct: 51377 aaaatcagaaaggaaattac 51358
>gb|AC146308.2| Medicago truncatula clone mth2-10a12, complete sequence Length = 112733 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 aaaatgaaaagggaaacaaa 113 |||||||||||||||||||| Sbjct: 73784 aaaatgaaaagggaaacaaa 73803
>gb|AC137554.15| Medicago truncatula clone mth2-17j18, complete sequence Length = 121248 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 aaaatgaaaagggaaacaaa 113 |||||||||||||||||||| Sbjct: 96296 aaaatgaaaagggaaacaaa 96277
>emb|BX936404.9| Zebrafish DNA sequence from clone CH211-237F6 in linkage group 17, complete sequence Length = 86765 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 72 ttgacaatgaatagacataataaaaatgaaaa 103 |||||||| |||| | |||||||||||||||| Sbjct: 82597 ttgacaattaataaaaataataaaaatgaaaa 82566
>emb|AL606759.8| Human DNA sequence from clone CTD-2319N17 on chromosome X, complete sequence Length = 30082 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 attacacatatatgtatatg 166 |||||||||||||||||||| Sbjct: 652 attacacatatatgtatatg 633
>emb|AL591202.8| Human DNA sequence from clone RP11-262B12 on chromosome X, complete sequence Length = 92817 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 aatagacataataaaaatga 100 |||||||||||||||||||| Sbjct: 27866 aatagacataataaaaatga 27847
>emb|AL512324.14| Human DNA sequence from clone RP11-432I13 on chromosome 10 Contains the 3' end of a breast cancer antigen (NY-BR-1) pseudogene, the 3' end of a novel gene, a pseudogene similar to part of cubilin (intrinsic factor-cobalamin receptor, CUBN), a seven transmembrane helix receptor (FLJ31393) pseudogene, the OR13A1 gene for olfactory receptor family 13 subfamily A member 1 and two CpG islands, complete sequence Length = 168473 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 aatagacataataaaaatga 100 |||||||||||||||||||| Sbjct: 125203 aatagacataataaaaatga 125184
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 gcgttggcatagatggcctcggtc 330 |||||||||| ||||||||||||| Sbjct: 1434599 gcgttggcattgatggcctcggtc 1434576
>emb|AL365400.19| Human DNA sequence from clone RP11-471G13 on chromosome Xq21.32-22.1 Contains a novel pseudogene, a heterogeneous nuclear ribonucleoprotein D-like (HNRPDL) pseudogene and a ribosomal protein S7 (RPS7) pseudogene, complete sequence Length = 176391 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 aatagacataataaaaatga 100 |||||||||||||||||||| Sbjct: 142791 aatagacataataaaaatga 142810
>emb|AL356739.11| Human DNA sequence from clone RP11-324P13 on chromosome 6, complete sequence Length = 98548 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 aaaggaaattacacatatat 159 |||||||||||||||||||| Sbjct: 72636 aaaggaaattacacatatat 72617
>gb|AC111653.8| Rattus norvegicus 2 BAC CH230-108E11 (Children's Hospital Oakland Research Institute) complete sequence Length = 247105 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 acatatatgtatatgctatc 171 |||||||||||||||||||| Sbjct: 112984 acatatatgtatatgctatc 113003
>emb|AL137026.21| Human DNA sequence from clone RP11-20J15 on chromosome 10 Contains CXCL12 gene for chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1), two putative transcripts and two putative CpG islands, complete sequence Length = 184474 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 aatagacataataaaaatga 100 |||||||||||||||||||| Sbjct: 21558 aatagacataataaaaatga 21539
>emb|AL022148.1|HS435A7 Human DNA sequence from clone RP3-435A7 on chromosome Xq22.1-22.3, complete sequence Length = 98067 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 attacacatatatgtatatg 166 |||||||||||||||||||| Sbjct: 96719 attacacatatatgtatatg 96700
>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29 Length = 299050 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 606 caggccgaagggtccgagggcgcc 629 |||||||| ||||||||||||||| Sbjct: 258180 caggccgacgggtccgagggcgcc 258157
>emb|AL929355.1|PFA929355 Plasmodium falciparum strain 3D7, chromosome 9; segment 1/5 Length = 330050 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 145 aaattacacatatatgtatatgct 168 |||||||| ||||||||||||||| Sbjct: 121170 aaattacatatatatgtatatgct 121147
>emb|CR933104.2| Medicago truncatula chromosome 5 clone mth2-25b3, COMPLETE SEQUENCE Length = 117135 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 81 aatagacataataaaaatgaaaagggaa 108 |||||| || |||||||||||||||||| Sbjct: 59216 aatagatatgataaaaatgaaaagggaa 59189
>gb|AC163900.3| Mus musculus BAC clone RP23-151K15 from chromosome 12, complete sequence Length = 200606 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gaaaatcagaaaggaaatta 150 |||||||||||||||||||| Sbjct: 177163 gaaaatcagaaaggaaatta 177144
>gb|AC025028.21| Homo sapiens 3 BAC RP11-238M12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 145969 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 aatagacataataaaaatga 100 |||||||||||||||||||| Sbjct: 49230 aatagacataataaaaatga 49249
>dbj|AB120741.1| Rhizophora stylosa DNA, microsatellite marker Rhst13 Length = 352 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 gaatagacataataaaaatgaaaa 103 |||||||||||| ||||||||||| Sbjct: 205 gaatagacataaaaaaaatgaaaa 182
>gb|AC008603.7| Homo sapiens chromosome 5 clone CTB-107P3, complete sequence Length = 123866 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 aatagacataataaaaatga 100 |||||||||||||||||||| Sbjct: 64547 aatagacataataaaaatga 64566
>gb|AC107383.3| Homo sapiens BAC clone RP11-125C20 from 4, complete sequence Length = 173808 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 147 attacacatatatgtatatgctat 170 |||||| ||||||||||||||||| Sbjct: 56808 attacatatatatgtatatgctat 56785
>gb|AC093848.2| Homo sapiens BAC clone RP11-486G21 from 4, complete sequence Length = 175064 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 90 aataaaaatgaaaagggaaacaaa 113 ||||||||||| |||||||||||| Sbjct: 124644 aataaaaatgataagggaaacaaa 124667
>gb|AC172372.2| Pan troglodytes BAC clone CH251-1067L6 from chromosome y, complete sequence Length = 192570 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 agaaaatcagaaaggaaatt 149 |||||||||||||||||||| Sbjct: 61916 agaaaatcagaaaggaaatt 61897 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 agaaaatcagaaaggaaatt 149 |||||||||||||||||||| Sbjct: 48088 agaaaatcagaaaggaaatt 48107
>gb|AC080172.5| Homo sapiens chromosome 11, clone CTC-790M5, complete sequence Length = 152435 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 aataaaaatgaaaagggaaa 109 |||||||||||||||||||| Sbjct: 143218 aataaaaatgaaaagggaaa 143199
>emb|BX649412.8| Zebrafish DNA sequence from clone DKEY-116G10 in linkage group 1, complete sequence Length = 78932 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 gacaatgaatagacataataaaaa 97 ||||||||||||||| |||||||| Sbjct: 36559 gacaatgaatagacagaataaaaa 36536
>gb|AC012378.10| Homo sapiens chromosome 15 clone RP11-420M1 map 15q21.3, complete sequence Length = 199289 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 aataaaaatgaaaagggaaa 109 |||||||||||||||||||| Sbjct: 82794 aataaaaatgaaaagggaaa 82775
>emb|BX004804.10| Zebrafish DNA sequence from clone CH211-39M5 in linkage group 5, complete sequence Length = 170010 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 gacaatgaatagacataataaaaa 97 |||| ||||||||||||||||||| Sbjct: 146952 gacactgaatagacataataaaaa 146975
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 taataaaaatgaaaagggaaacaa 112 |||||||||||||||||| ||||| Sbjct: 11611954 taataaaaatgaaaaggggaacaa 11611931
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 ccgggcgccggtggcgttgt 289 |||||||||||||||||||| Sbjct: 24600216 ccgggcgccggtggcgttgt 24600235
>gb|AC008364.5|AC008364 Drosophila melanogaster, chromosome 3R, region 92D-92D, BAC clone BACR09G02, complete sequence Length = 166642 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 ataataaaaatgaaaagggaaaca 111 ||||||||||||||||| |||||| Sbjct: 115617 ataataaaaatgaaaagagaaaca 115594
>gb|AC092609.2| Homo sapiens BAC clone RP11-160A16 from 4, complete sequence Length = 150751 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 attacacatatatgtatatg 166 |||||||||||||||||||| Sbjct: 77678 attacacatatatgtatatg 77659
>gb|AC154582.2| Mus musculus BAC clone RP23-381N7 from chromosome 12, complete sequence Length = 194302 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 attacacatatatgtatatg 166 |||||||||||||||||||| Sbjct: 121904 attacacatatatgtatatg 121885
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 gtgacccgggcgccggtggc 284 |||||||||||||||||||| Sbjct: 2769290 gtgacccgggcgccggtggc 2769309
>gb|AC172373.3| Pan troglodytes BAC clone CH251-1081D19 from chromosome y, complete sequence Length = 194913 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 agaaaatcagaaaggaaatt 149 |||||||||||||||||||| Sbjct: 5879 agaaaatcagaaaggaaatt 5860
>gb|AY957562.1| Bombina orientalis mitochondrion, complete genome Length = 17173 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 aaattacacatatatgtata 164 |||||||||||||||||||| Sbjct: 17088 aaattacacatatatgtata 17069
>gb|AC027045.21| Homo sapiens chromosome 17, clone RP11-477N12, complete sequence Length = 188646 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 atagacataataaaaatgaa 101 |||||||||||||||||||| Sbjct: 75121 atagacataataaaaatgaa 75140
>gb|AC125041.2| Mus musculus BAC clone RP23-337J19 from chromosome 12, complete sequence Length = 202288 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gaaaatcagaaaggaaatta 150 |||||||||||||||||||| Sbjct: 54314 gaaaatcagaaaggaaatta 54295
>gb|AC122918.4| Mus musculus chromosome 6 clone RP23-29F15, complete sequence Length = 210315 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 taaaaatgaaaagggaaaca 111 |||||||||||||||||||| Sbjct: 207560 taaaaatgaaaagggaaaca 207579
>gb|AC004672.1|AC004672 Homo sapiens 12p13.3-0-2.7 BAC RP5-951N9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 85420 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 aaattacacatatatgtata 164 |||||||||||||||||||| Sbjct: 39786 aaattacacatatatgtata 39805
>dbj|AP005836.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0013F08 Length = 166989 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 taataaaaatgaaaagggaaacaa 112 |||||||||||||||||| ||||| Sbjct: 127961 taataaaaatgaaaaggggaacaa 127938
>dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0711F01 Length = 193091 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 taataaaaatgaaaagggaaacaa 112 |||||||||||||||||| ||||| Sbjct: 46588 taataaaaatgaaaaggggaacaa 46565
>dbj|AP005809.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0039M16 Length = 133229 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 ccgggcgccggtggcgttgt 289 |||||||||||||||||||| Sbjct: 56283 ccgggcgccggtggcgttgt 56302
>emb|BX571982.6| Zebrafish DNA sequence from clone CH211-204K19 in linkage group 6, complete sequence Length = 162020 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 ggcagaagtgtgtgcgcatg 519 |||||||||||||||||||| Sbjct: 12714 ggcagaagtgtgtgcgcatg 12733
>gb|AC155838.7| Mus musculus 6 BAC RP24-441P8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 196288 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 acataataaaaatgaaaagg 105 |||||||||||||||||||| Sbjct: 156175 acataataaaaatgaaaagg 156156
>dbj|AP005807.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0018H10 Length = 135879 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 ccgggcgccggtggcgttgt 289 |||||||||||||||||||| Sbjct: 93510 ccgggcgccggtggcgttgt 93529
>gb|AC002071.1|AC002071 Human PAC clone RP1-2C6 from Xq23, complete sequence Length = 63726 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 aatagacataataaaaatga 100 |||||||||||||||||||| Sbjct: 37956 aatagacataataaaaatga 37937
>gb|AC115020.11| Mus musculus chromosome 1, clone RP24-231D14, complete sequence Length = 188569 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 aaaatcagaaaggaaattac 151 |||||||||||||||||||| Sbjct: 15850 aaaatcagaaaggaaattac 15869
>gb|AC101703.11| Mus musculus chromosome 1, clone RP23-248B15, complete sequence Length = 208984 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 aaaaatgaaaagggaaacaa 112 |||||||||||||||||||| Sbjct: 32207 aaaaatgaaaagggaaacaa 32188
>gb|AE003729.3| Drosophila melanogaster chromosome 3R, section 67 of 118 of the complete sequence Length = 232477 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 ataataaaaatgaaaagggaaaca 111 ||||||||||||||||| |||||| Sbjct: 185569 ataataaaaatgaaaagagaaaca 185546
>gb|AC174597.2| Mus musculus BAC clone RP24-418F6 from chromosome 6, complete sequence Length = 188358 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 taaaaatgaaaagggaaaca 111 |||||||||||||||||||| Sbjct: 92718 taaaaatgaaaagggaaaca 92737
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 570 atcaccaccgtggtgcctgg 589 |||||||||||||||||||| Sbjct: 2533767 atcaccaccgtggtgcctgg 2533748
>dbj|AP002444.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-262A12, complete sequence Length = 174558 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 aataaaaatgaaaagggaaa 109 |||||||||||||||||||| Sbjct: 22814 aataaaaatgaaaagggaaa 22833
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 382 acgatggagtggtccaccagcacc 405 |||||||||| ||||||||||||| Sbjct: 220982 acgatggagtcgtccaccagcacc 221005
>gb|AC157825.3| Mus musculus BAC clone RP23-230M23 from chromosome 16, complete sequence Length = 207864 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 acataataaaaatgaaaagg 105 |||||||||||||||||||| Sbjct: 58700 acataataaaaatgaaaagg 58719
>emb|CT010565.14| Mouse DNA sequence from clone RP23-263E11 on chromosome 16, complete sequence Length = 200242 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 acataataaaaatgaaaagg 105 |||||||||||||||||||| Sbjct: 41698 acataataaaaatgaaaagg 41679
>gb|AC140368.3| Mus musculus BAC clone RP23-198E1 from 14, complete sequence Length = 177084 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 aataaaaatgaaaagggaaa 109 |||||||||||||||||||| Sbjct: 75792 aataaaaatgaaaagggaaa 75811
>gb|AY823304.1| Norovirus swine/GII/OH-QW101/03/US RNA-dependent RNA polymerase gene, partial cds; and capsid protein and VP2 small basic protein genes, complete cds Length = 3316 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 aaaatgaaaagggaaacaaagata 117 |||| ||||||||||||||||||| Sbjct: 3300 aaaaggaaaagggaaacaaagata 3277
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 382 acgatggagtggtccaccagcacc 405 |||||||||| ||||||||||||| Sbjct: 3076072 acgatggagtcgtccaccagcacc 3076095 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,810,481 Number of Sequences: 3902068 Number of extensions: 5810481 Number of successful extensions: 158999 Number of sequences better than 10.0: 174 Number of HSP's better than 10.0 without gapping: 173 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 158000 Number of HSP's gapped (non-prelim): 983 length of query: 635 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 612 effective length of database: 17,143,297,704 effective search space: 10491698194848 effective search space used: 10491698194848 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
