| Clone Name | rbaal33h11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY714526.1| Aegilops tauschii protein kinase 1 mRNA, complete cds Length = 1438 Score = 801 bits (404), Expect = 0.0 Identities = 517/556 (92%), Gaps = 1/556 (0%) Strand = Plus / Minus Query: 2 aaacacatgtaatcatacaacagcacagcgcaaccctctgaaacaaacgacacaacagaa 61 ||||||||||||||||||||||||||| | ||||||||||||| ||| | |||||||||| Sbjct: 1364 aaacacatgtaatcatacaacagcacaccacaaccctctgaaataaatggcacaacagaa 1305 Query: 62 ggatgaacccattacaaacacaaaggccacaccaccagagggaaaccatcacgcctgctc 121 |||||||| |||||||||||||||||||||||||||| |||| |||| ||||||||||| Sbjct: 1304 ggatgaacacattacaaacacaaaggccacaccacca-aggggaaccgccacgcctgctc 1246 Query: 122 gtcacaatgcgcacacgaagtctccgctgtcctcgacgtccgcgtcgacgtcgtntatat 181 ||||||| |||||||| ||||| |||||||||||||||||| ||||||| || | ||| | Sbjct: 1245 gtcacaacgcgcacacaaagtcaccgctgtcctcgacgtccacgtcgacatcatctatgt 1186 Query: 182 catcgagctccatgctccctagcccgggcaccgacagctgcccggcgaacttggatccgt 241 | ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||| Sbjct: 1185 cgtcgagctccatgctccctagcccaggcactgacagctgcccggcgaacttggaaccgt 1126 Query: 242 cgcccggtatccgggcctcctggatgatggccatgatctcctccaggctctgcgggggcg 301 ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 1125 cgcccggtatccgcgcctcctggatgatggccatgatctcctccagggtctgcgggggag 1066 Query: 302 cattgacgccgaccatgtgcaggctcatttggtactcgtcggtcatctcgatcggcagat 361 | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1065 cgttgacgccgaccatgtgcaggctcatctggtactcgtcggtcatctcgatcggcagat 1006 Query: 362 tcttgaggaaccacgggtggttctttatctcctggattgttattcgttgctcggggtttg 421 ||||||||||||||||||||||||| ||||| ||||| |||||||||||||| ||||||| Sbjct: 1005 tcttgaggaaccacgggtggttcttgatctcttggatggttattcgttgctcagggtttg 946 Query: 422 ccacgaaaatccgggacagcaaatgtctgcactccattgaaatccggacgtaatcaggta 481 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 945 ccacgaaaatccgggacagcaaatgtctgcactccattgaaatccggacataatcaggta 886 Query: 482 ctgagtattgnacactgagtatnctagnaattgncttgcggaaattcttnggttcgnctg 541 |||||||||| ||||||||||| |||| ||||| ||||||||||||||| |||||| ||| Sbjct: 885 ctgagtattgtacactgagtatcctagtaattgtcttgcggaaattcttcggttcgtctg 826 Query: 542 ggtcctnaaaaggata 557 |||||| ||||||||| Sbjct: 825 ggtcctcaaaaggata 810
>ref|NM_189878.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1398 Score = 230 bits (116), Expect = 4e-57 Identities = 353/434 (81%), Gaps = 8/434 (1%) Strand = Plus / Minus Query: 119 ctcgtcacaatgcgcacacgaagtctccgctgtcctcgacgtccgcgtcgacgtcgtnta 178 ||||||||||||||||||||||||| ||||||||||||||||| |||| || || | Sbjct: 1246 ctcgtcacaatgcgcacacgaagtcgccgctgtcctcgacgtcgatgtcgtcggtgtcaa 1187 Query: 179 tatcatcgagctccatgctccctag-cccgggcaccgacagctgcccggcgaacttggat 237 || |||||||||||||||||||| |||||| | |||||||| ||| ||||| Sbjct: 1186 cgtcgtcgagctccatgctccctaggcccggg-------atctgcccggagaatttggag 1134 Query: 238 ccgtcgcccggtatccgggcctcctggatgatggccatgatctcctccaggctctgcggg 297 || || ||||| |||| |||||||| ||||||||||||||||||||||||| ||| | Sbjct: 1133 ccatcacccggcttccgcgcctcctgtatgatggccatgatctcctccaggccctgtgac 1074 Query: 298 ggcgcattgacgccgaccatgtgcaggctcatttggtactcgtcggtcatctcgatcggc 357 || | |||| | || ||| || | |||||| ||||||||||| ||||||||||||||| Sbjct: 1073 ggggtgttgatgtcgttcatctggacgctcatctggtactcgtcagtcatctcgatcggc 1014 Query: 358 agattcttgaggaaccacgggtggttctttatctcctggattgttattcgttgctcgggg 417 || |||||||||||||| ||||||||||| ||||| | || || ||||||||||| ||| Sbjct: 1013 aggttcttgaggaaccatgggtggttcttgatctcaggaatggtaattcgttgctctggg 954 Query: 418 tttgccacgaaaatccgggacagcaaatgtctgcactccattgaaatccggacgtaatca 477 ||||||||||||||||||||||| | ||||||||| ||||| |||| || || |||||| Sbjct: 953 tttgccacgaaaatccgggacagaagatgtctgcattccatcgaaactcgaacataatca 894 Query: 478 ggtactgagtattgnacactgagtatnctagnaattgncttgcggaaattcttnggttcg 537 || || |||||| || || ||||| | || ||||| ||||||||| || | |||||| Sbjct: 893 ggaaccatgtattgtacgcttagtatccgagtaattgtcttgcggaagtttcttggttcg 834 Query: 538 nctgggtcctnaaa 551 | ||||||| ||| Sbjct: 833 tcagggtcctcaaa 820
>ref|XM_506481.1| PREDICTED Oryza sativa (japonica cultivar-group), P0594D10.134 mRNA Length = 1414 Score = 230 bits (116), Expect = 4e-57 Identities = 353/434 (81%), Gaps = 8/434 (1%) Strand = Plus / Minus Query: 119 ctcgtcacaatgcgcacacgaagtctccgctgtcctcgacgtccgcgtcgacgtcgtnta 178 ||||||||||||||||||||||||| ||||||||||||||||| |||| || || | Sbjct: 1248 ctcgtcacaatgcgcacacgaagtcgccgctgtcctcgacgtcgatgtcgtcggtgtcaa 1189 Query: 179 tatcatcgagctccatgctccctag-cccgggcaccgacagctgcccggcgaacttggat 237 || |||||||||||||||||||| |||||| | |||||||| ||| ||||| Sbjct: 1188 cgtcgtcgagctccatgctccctaggcccggg-------atctgcccggagaatttggag 1136 Query: 238 ccgtcgcccggtatccgggcctcctggatgatggccatgatctcctccaggctctgcggg 297 || || ||||| |||| |||||||| ||||||||||||||||||||||||| ||| | Sbjct: 1135 ccatcacccggcttccgcgcctcctgtatgatggccatgatctcctccaggccctgtgac 1076 Query: 298 ggcgcattgacgccgaccatgtgcaggctcatttggtactcgtcggtcatctcgatcggc 357 || | |||| | || ||| || | |||||| ||||||||||| ||||||||||||||| Sbjct: 1075 ggggtgttgatgtcgttcatctggacgctcatctggtactcgtcagtcatctcgatcggc 1016 Query: 358 agattcttgaggaaccacgggtggttctttatctcctggattgttattcgttgctcgggg 417 || |||||||||||||| ||||||||||| ||||| | || || ||||||||||| ||| Sbjct: 1015 aggttcttgaggaaccatgggtggttcttgatctcaggaatggtaattcgttgctctggg 956 Query: 418 tttgccacgaaaatccgggacagcaaatgtctgcactccattgaaatccggacgtaatca 477 ||||||||||||||||||||||| | ||||||||| ||||| |||| || || |||||| Sbjct: 955 tttgccacgaaaatccgggacagaagatgtctgcattccatcgaaactcgaacataatca 896 Query: 478 ggtactgagtattgnacactgagtatnctagnaattgncttgcggaaattcttnggttcg 537 || || |||||| || || ||||| | || ||||| ||||||||| || | |||||| Sbjct: 895 ggaaccatgtattgtacgcttagtatccgagtaattgtcttgcggaagtttcttggttcg 836 Query: 538 nctgggtcctnaaa 551 | ||||||| ||| Sbjct: 835 tcagggtcctcaaa 822
>gb|AY207043.1| Oryza sativa (indica cultivar-group) abcisic acid-inducible protein kinanase mRNA, partial cds Length = 1089 Score = 230 bits (116), Expect = 4e-57 Identities = 353/434 (81%), Gaps = 8/434 (1%) Strand = Plus / Minus Query: 119 ctcgtcacaatgcgcacacgaagtctccgctgtcctcgacgtccgcgtcgacgtcgtnta 178 ||||||||||||||||||||||||| ||||||||||||||||| |||| || || | Sbjct: 1067 ctcgtcacaatgcgcacacgaagtcgccgctgtcctcgacgtcgatgtcgtcggtgtcaa 1008 Query: 179 tatcatcgagctccatgctccctag-cccgggcaccgacagctgcccggcgaacttggat 237 || |||||||||||||||||||| |||||| | |||||||| ||| ||||| Sbjct: 1007 cgtcgtcgagctccatgctccctaggcccggg-------atctgcccggagaatttggag 955 Query: 238 ccgtcgcccggtatccgggcctcctggatgatggccatgatctcctccaggctctgcggg 297 || || ||||| |||| |||||||| ||||||||||||||||||||||||| ||| | Sbjct: 954 ccatcacccggcttccgcgcctcctgtatgatggccatgatctcctccaggccctgtgac 895 Query: 298 ggcgcattgacgccgaccatgtgcaggctcatttggtactcgtcggtcatctcgatcggc 357 || | |||| | || ||| || | |||||| ||||||||||| ||||||||||||||| Sbjct: 894 ggggtgttgatgtcgttcatctggacgctcatctggtactcgtcagtcatctcgatcggc 835 Query: 358 agattcttgaggaaccacgggtggttctttatctcctggattgttattcgttgctcgggg 417 || |||||||||||||| ||||||||||| ||||| | || || ||||||||||| ||| Sbjct: 834 aggttcttgaggaaccatgggtggttcttgatctcaggaatggtaattcgttgctctggg 775 Query: 418 tttgccacgaaaatccgggacagcaaatgtctgcactccattgaaatccggacgtaatca 477 ||||||||||||||||||||||| | ||||||||| ||||| |||| || || |||||| Sbjct: 774 tttgccacgaaaatccgggacagaagatgtctgcattccatcgaaactcgaacataatca 715 Query: 478 ggtactgagtattgnacactgagtatnctagnaattgncttgcggaaattcttnggttcg 537 || || |||||| || || ||||| | || ||||| ||||||||| || | |||||| Sbjct: 714 ggaaccatgtattgtacgcttagtatccgagtaattgtcttgcggaagtttcttggttcg 655 Query: 538 nctgggtcctnaaa 551 | ||||||| ||| Sbjct: 654 tcagggtcctcaaa 641
>dbj|AB125303.1| Oryza sativa (japonica cultivar-group) sapk2 mRNA for serine/threonine protein kinase SAPK2, complete cds Length = 1401 Score = 230 bits (116), Expect = 4e-57 Identities = 353/434 (81%), Gaps = 8/434 (1%) Strand = Plus / Minus Query: 119 ctcgtcacaatgcgcacacgaagtctccgctgtcctcgacgtccgcgtcgacgtcgtnta 178 ||||||||||||||||||||||||| ||||||||||||||||| |||| || || | Sbjct: 1249 ctcgtcacaatgcgcacacgaagtcgccgctgtcctcgacgtcgatgtcgtcggtgtcaa 1190 Query: 179 tatcatcgagctccatgctccctag-cccgggcaccgacagctgcccggcgaacttggat 237 || |||||||||||||||||||| |||||| | |||||||| ||| ||||| Sbjct: 1189 cgtcgtcgagctccatgctccctaggcccggg-------atctgcccggagaatttggag 1137 Query: 238 ccgtcgcccggtatccgggcctcctggatgatggccatgatctcctccaggctctgcggg 297 || || ||||| |||| |||||||| ||||||||||||||||||||||||| ||| | Sbjct: 1136 ccatcacccggcttccgcgcctcctgtatgatggccatgatctcctccaggccctgtgac 1077 Query: 298 ggcgcattgacgccgaccatgtgcaggctcatttggtactcgtcggtcatctcgatcggc 357 || | |||| | || ||| || | |||||| ||||||||||| ||||||||||||||| Sbjct: 1076 ggggtgttgatgtcgttcatctggacgctcatctggtactcgtcagtcatctcgatcggc 1017 Query: 358 agattcttgaggaaccacgggtggttctttatctcctggattgttattcgttgctcgggg 417 || |||||||||||||| ||||||||||| ||||| | || || ||||||||||| ||| Sbjct: 1016 aggttcttgaggaaccatgggtggttcttgatctcaggaatggtaattcgttgctctggg 957 Query: 418 tttgccacgaaaatccgggacagcaaatgtctgcactccattgaaatccggacgtaatca 477 ||||||||||||||||||||||| | ||||||||| ||||| |||| || || |||||| Sbjct: 956 tttgccacgaaaatccgggacagaagatgtctgcattccatcgaaactcgaacataatca 897 Query: 478 ggtactgagtattgnacactgagtatnctagnaattgncttgcggaaattcttnggttcg 537 || || |||||| || || ||||| | || ||||| ||||||||| || | |||||| Sbjct: 896 ggaaccatgtattgtacgcttagtatccgagtaattgtcttgcggaagtttcttggttcg 837 Query: 538 nctgggtcctnaaa 551 | ||||||| ||| Sbjct: 836 tcagggtcctcaaa 823
>dbj|AK103945.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-A05, full insert sequence Length = 1397 Score = 230 bits (116), Expect = 4e-57 Identities = 353/434 (81%), Gaps = 8/434 (1%) Strand = Plus / Minus Query: 119 ctcgtcacaatgcgcacacgaagtctccgctgtcctcgacgtccgcgtcgacgtcgtnta 178 ||||||||||||||||||||||||| ||||||||||||||||| |||| || || | Sbjct: 1245 ctcgtcacaatgcgcacacgaagtcgccgctgtcctcgacgtcgatgtcgtcggtgtcaa 1186 Query: 179 tatcatcgagctccatgctccctag-cccgggcaccgacagctgcccggcgaacttggat 237 || |||||||||||||||||||| |||||| | |||||||| ||| ||||| Sbjct: 1185 cgtcgtcgagctccatgctccctaggcccggg-------atctgcccggagaatttggag 1133 Query: 238 ccgtcgcccggtatccgggcctcctggatgatggccatgatctcctccaggctctgcggg 297 || || ||||| |||| |||||||| ||||||||||||||||||||||||| ||| | Sbjct: 1132 ccatcacccggcttccgcgcctcctgtatgatggccatgatctcctccaggccctgtgac 1073 Query: 298 ggcgcattgacgccgaccatgtgcaggctcatttggtactcgtcggtcatctcgatcggc 357 || | |||| | || ||| || | |||||| ||||||||||| ||||||||||||||| Sbjct: 1072 ggggtgttgatgtcgttcatctggacgctcatctggtactcgtcagtcatctcgatcggc 1013 Query: 358 agattcttgaggaaccacgggtggttctttatctcctggattgttattcgttgctcgggg 417 || |||||||||||||| ||||||||||| ||||| | || || ||||||||||| ||| Sbjct: 1012 aggttcttgaggaaccatgggtggttcttgatctcaggaatggtaattcgttgctctggg 953 Query: 418 tttgccacgaaaatccgggacagcaaatgtctgcactccattgaaatccggacgtaatca 477 ||||||||||||||||||||||| | ||||||||| ||||| |||| || || |||||| Sbjct: 952 tttgccacgaaaatccgggacagaagatgtctgcattccatcgaaactcgaacataatca 893 Query: 478 ggtactgagtattgnacactgagtatnctagnaattgncttgcggaaattcttnggttcg 537 || || |||||| || || ||||| | || ||||| ||||||||| || | |||||| Sbjct: 892 ggaaccatgtattgtacgcttagtatccgagtaattgtcttgcggaagtttcttggttcg 833 Query: 538 nctgggtcctnaaa 551 | ||||||| ||| Sbjct: 832 tcagggtcctcaaa 819
>dbj|AK070965.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068H23, full insert sequence Length = 1414 Score = 230 bits (116), Expect = 4e-57 Identities = 353/434 (81%), Gaps = 8/434 (1%) Strand = Plus / Minus Query: 119 ctcgtcacaatgcgcacacgaagtctccgctgtcctcgacgtccgcgtcgacgtcgtnta 178 ||||||||||||||||||||||||| ||||||||||||||||| |||| || || | Sbjct: 1248 ctcgtcacaatgcgcacacgaagtcgccgctgtcctcgacgtcgatgtcgtcggtgtcaa 1189 Query: 179 tatcatcgagctccatgctccctag-cccgggcaccgacagctgcccggcgaacttggat 237 || |||||||||||||||||||| |||||| | |||||||| ||| ||||| Sbjct: 1188 cgtcgtcgagctccatgctccctaggcccggg-------atctgcccggagaatttggag 1136 Query: 238 ccgtcgcccggtatccgggcctcctggatgatggccatgatctcctccaggctctgcggg 297 || || ||||| |||| |||||||| ||||||||||||||||||||||||| ||| | Sbjct: 1135 ccatcacccggcttccgcgcctcctgtatgatggccatgatctcctccaggccctgtgac 1076 Query: 298 ggcgcattgacgccgaccatgtgcaggctcatttggtactcgtcggtcatctcgatcggc 357 || | |||| | || ||| || | |||||| ||||||||||| ||||||||||||||| Sbjct: 1075 ggggtgttgatgtcgttcatctggacgctcatctggtactcgtcagtcatctcgatcggc 1016 Query: 358 agattcttgaggaaccacgggtggttctttatctcctggattgttattcgttgctcgggg 417 || |||||||||||||| ||||||||||| ||||| | || || ||||||||||| ||| Sbjct: 1015 aggttcttgaggaaccatgggtggttcttgatctcaggaatggtaattcgttgctctggg 956 Query: 418 tttgccacgaaaatccgggacagcaaatgtctgcactccattgaaatccggacgtaatca 477 ||||||||||||||||||||||| | ||||||||| ||||| |||| || || |||||| Sbjct: 955 tttgccacgaaaatccgggacagaagatgtctgcattccatcgaaactcgaacataatca 896 Query: 478 ggtactgagtattgnacactgagtatnctagnaattgncttgcggaaattcttnggttcg 537 || || |||||| || || ||||| | || ||||| ||||||||| || | |||||| Sbjct: 895 ggaaccatgtattgtacgcttagtatccgagtaattgtcttgcggaagtttcttggttcg 836 Query: 538 nctgggtcctnaaa 551 | ||||||| ||| Sbjct: 835 tcagggtcctcaaa 822
>gb|AY107474.1| Zea mays PCO105841 mRNA sequence Length = 970 Score = 180 bits (91), Expect = 3e-42 Identities = 261/320 (81%) Strand = Plus / Minus Query: 238 ccgtcgcccggtatccgggcctcctggatgatggccatgatctcctccaggctctgcggg 297 |||||||| || ||||||||||| | ||||||| |||||||||||||||||| |||| | Sbjct: 588 ccgtcgccgggcttccgggcctccagtatgatggacatgatctcctccaggctttgcgag 529 Query: 298 ggcgcattgacgccgaccatgtgcaggctcatttggtactcgtcggtcatctcgatcggc 357 || |||| | | |||| | || ||| |||| ||||||||||||||||||||||| ||| Sbjct: 528 gggacattcatgtcgactagctgtaggttcatctggtactcgtcggtcatctcgatgggc 469 Query: 358 agattcttgaggaaccacgggtggttctttatctcctggattgttattcgttgctcgggg 417 || ||||| |||||||| ||||||||||| ||||| |||| ||||| |||||||| || Sbjct: 468 aggttcttcaggaaccatgggtggttcttgatctctgggatggttatccgttgctcaggt 409 Query: 418 tttgccacgaaaatccgggacagcaaatgtctgcactccattgaaatccggacgtaatca 477 || ||||| || ||||| ||||||| ||| |||||||||||||||| ||||| ||||| Sbjct: 408 ttcgccacaaagatccgagacagcagatgcctgcactccattgaaactcggacaaaatca 349 Query: 478 ggtactgagtattgnacactgagtatnctagnaattgncttgcggaaattcttnggttcg 537 || || | ||| || || |||| || | || || | ||||||||||||||| |||||| Sbjct: 348 ggaaccgcgtactggacgctgataatccgagtaagcgtcttgcggaaattcttcggttcg 289 Query: 538 nctgggtcctnaaaaggata 557 | ||||||| ||| ||||| Sbjct: 288 tcggggtcctcaaagggata 269
>ref|XM_470803.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1468 Score = 163 bits (82), Expect = 8e-37 Identities = 258/319 (80%) Strand = Plus / Minus Query: 239 cgtcgcccggtatccgggcctcctggatgatggccatgatctcctccaggctctgcgggg 298 ||||||||||| ||||||||||||| ||||| ||||||| ||||||||||||||||| | Sbjct: 1117 cgtcgcccggtttccgggcctcctgaatgatcgccatgacctcctccaggctctgcgacg 1058 Query: 299 gcgcattgacgccgaccatgtgcaggctcatttggtactcgtcggtcatctcgatcggca 358 ||| || | | | ||| |||| |||| | ||||||||||||||||||||||| |||| Sbjct: 1057 gcgtgttcatgtccgccagctgcatgctcctctggtactcgtcggtcatctcgatgggca 998 Query: 359 gattcttgaggaaccacgggtggttctttatctcctggattgttattcgttgctcggggt 418 | ||||| |||||||| ||||||||||| ||||| |||| ||||| | ||||| || | Sbjct: 997 ggttcttcaggaaccatgggtggttcttgatctctgggatagttatcctctgctcaggat 938 Query: 419 ttgccacgaaaatccgggacagcaaatgtctgcactccattgaaatccggacgtaatcag 478 || | ||||||||||||||||| | ||||||||| ||| ||||| || ||||| || | Sbjct: 937 ttccaacgaaaatccgggacaggagatgtctgcagtccgctgaaactcgaacgtagtctg 878 Query: 479 gtactgagtattgnacactgagtatnctagnaattgncttgcggaaattcttnggttcgn 538 | | ||| || || ||||||||||| |||| || | ||||||||| ||| | || || Sbjct: 877 gaattgaatactgtacactgagtatcctagtgatcgtcttgcggaagttccttgggtcat 818 Query: 539 ctgggtcctnaaaaggata 557 | ||||||| ||||||||| Sbjct: 817 cagggtcctcaaaaggata 799 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 123 tcacaatgcgcacacgaagtctccgctgtcctcga 157 |||||| |||||||||||||| ||||||| ||||| Sbjct: 1236 tcacaaggcgcacacgaagtccccgctgttctcga 1202
>dbj|AB125302.1| Oryza sativa (japonica cultivar-group) SAPK1 mRNA for serine/threonine protein kinase SAPK1, complete cds Length = 1471 Score = 163 bits (82), Expect = 8e-37 Identities = 258/319 (80%) Strand = Plus / Minus Query: 239 cgtcgcccggtatccgggcctcctggatgatggccatgatctcctccaggctctgcgggg 298 ||||||||||| ||||||||||||| ||||| ||||||| ||||||||||||||||| | Sbjct: 1146 cgtcgcccggtttccgggcctcctgaatgatcgccatgacctcctccaggctctgcgacg 1087 Query: 299 gcgcattgacgccgaccatgtgcaggctcatttggtactcgtcggtcatctcgatcggca 358 ||| || | | | ||| |||| |||| | ||||||||||||||||||||||| |||| Sbjct: 1086 gcgtgttcatgtccgccagctgcatgctcctctggtactcgtcggtcatctcgatgggca 1027 Query: 359 gattcttgaggaaccacgggtggttctttatctcctggattgttattcgttgctcggggt 418 | ||||| |||||||| ||||||||||| ||||| |||| ||||| | ||||| || | Sbjct: 1026 ggttcttcaggaaccatgggtggttcttgatctctgggatagttatcctctgctcaggat 967 Query: 419 ttgccacgaaaatccgggacagcaaatgtctgcactccattgaaatccggacgtaatcag 478 || | ||||||||||||||||| | ||||||||| ||| ||||| || ||||| || | Sbjct: 966 ttccaacgaaaatccgggacaggagatgtctgcagtccgctgaaactcgaacgtagtctg 907 Query: 479 gtactgagtattgnacactgagtatnctagnaattgncttgcggaaattcttnggttcgn 538 | | ||| || || ||||||||||| |||| || | ||||||||| ||| | || || Sbjct: 906 gaattgaatactgtacactgagtatcctagtgatcgtcttgcggaagttccttgggtcat 847 Query: 539 ctgggtcctnaaaaggata 557 | ||||||| ||||||||| Sbjct: 846 cagggtcctcaaaaggata 828 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 123 tcacaatgcgcacacgaagtctccgctgtcctcga 157 |||||| |||||||||||||| ||||||| ||||| Sbjct: 1265 tcacaaggcgcacacgaagtccccgctgttctcga 1231
>dbj|AK068899.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001G01, full insert sequence Length = 1674 Score = 163 bits (82), Expect = 8e-37 Identities = 258/319 (80%) Strand = Plus / Minus Query: 239 cgtcgcccggtatccgggcctcctggatgatggccatgatctcctccaggctctgcgggg 298 ||||||||||| ||||||||||||| ||||| ||||||| ||||||||||||||||| | Sbjct: 1127 cgtcgcccggtttccgggcctcctgaatgatcgccatgacctcctccaggctctgcgacg 1068 Query: 299 gcgcattgacgccgaccatgtgcaggctcatttggtactcgtcggtcatctcgatcggca 358 ||| || | | | ||| |||| |||| | ||||||||||||||||||||||| |||| Sbjct: 1067 gcgtgttcatgtccgccagctgcatgctcctctggtactcgtcggtcatctcgatgggca 1008 Query: 359 gattcttgaggaaccacgggtggttctttatctcctggattgttattcgttgctcggggt 418 | ||||| |||||||| ||||||||||| ||||| |||| ||||| | ||||| || | Sbjct: 1007 ggttcttcaggaaccatgggtggttcttgatctctgggatagttatcctctgctcaggat 948 Query: 419 ttgccacgaaaatccgggacagcaaatgtctgcactccattgaaatccggacgtaatcag 478 || | ||||||||||||||||| | ||||||||| ||| ||||| || ||||| || | Sbjct: 947 ttccaacgaaaatccgggacaggagatgtctgcagtccgctgaaactcgaacgtagtctg 888 Query: 479 gtactgagtattgnacactgagtatnctagnaattgncttgcggaaattcttnggttcgn 538 | | ||| || || ||||||||||| |||| || | ||||||||| ||| | || || Sbjct: 887 gaattgaatactgtacactgagtatcctagtgatcgtcttgcggaagttccttgggtcat 828 Query: 539 ctgggtcctnaaaaggata 557 | ||||||| ||||||||| Sbjct: 827 cagggtcctcaaaaggata 809 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 123 tcacaatgcgcacacgaagtctccgctgtcctcga 157 |||||| |||||||||||||| ||||||| ||||| Sbjct: 1246 tcacaaggcgcacacgaagtccccgctgttctcga 1212
>dbj|AK060856.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-F03, full insert sequence Length = 1390 Score = 163 bits (82), Expect = 8e-37 Identities = 258/319 (80%) Strand = Plus / Minus Query: 239 cgtcgcccggtatccgggcctcctggatgatggccatgatctcctccaggctctgcgggg 298 ||||||||||| ||||||||||||| ||||| ||||||| ||||||||||||||||| | Sbjct: 1084 cgtcgcccggtttccgggcctcctgaatgatcgccatgacctcctccaggctctgcgacg 1025 Query: 299 gcgcattgacgccgaccatgtgcaggctcatttggtactcgtcggtcatctcgatcggca 358 ||| || | | | ||| |||| |||| | ||||||||||||||||||||||| |||| Sbjct: 1024 gcgtgttcatgtccgccagctgcatgctcctctggtactcgtcggtcatctcgatgggca 965 Query: 359 gattcttgaggaaccacgggtggttctttatctcctggattgttattcgttgctcggggt 418 | ||||| |||||||| ||||||||||| ||||| |||| ||||| | ||||| || | Sbjct: 964 ggttcttcaggaaccatgggtggttcttgatctctgggatagttatcctctgctcaggat 905 Query: 419 ttgccacgaaaatccgggacagcaaatgtctgcactccattgaaatccggacgtaatcag 478 || | ||||||||||||||||| | ||||||||| ||| ||||| || ||||| || | Sbjct: 904 ttccaacgaaaatccgggacaggagatgtctgcagtccgctgaaactcgaacgtagtctg 845 Query: 479 gtactgagtattgnacactgagtatnctagnaattgncttgcggaaattcttnggttcgn 538 | | ||| || || ||||||||||| |||| || | ||||||||| ||| | || || Sbjct: 844 gaattgaatactgtacactgagtatcctagtgatcgtcttgcggaagttccttgggtcat 785 Query: 539 ctgggtcctnaaaaggata 557 | ||||||| ||||||||| Sbjct: 784 cagggtcctcaaaaggata 766 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 123 tcacaatgcgcacacgaagtctccgctgtcctcga 157 |||||| |||||||||||||| ||||||| ||||| Sbjct: 1203 tcacaaggcgcacacgaagtccccgctgttctcga 1169
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 155 bits (78), Expect = 2e-34 Identities = 226/275 (82%), Gaps = 8/275 (2%) Strand = Plus / Minus Query: 119 ctcgtcacaatgcgcacacgaagtctccgctgtcctcgacgtccgcgtcgacgtcgtnta 178 ||||||||||||||||||||||||| ||||||||||||||||| |||| || || | Sbjct: 25668263 ctcgtcacaatgcgcacacgaagtcgccgctgtcctcgacgtcgatgtcgtcggtgtcaa 25668204 Query: 179 tatcatcgagctccatgctccctag-cccgggcaccgacagctgcccggcgaacttggat 237 || |||||||||||||||||||| |||||| | |||||||| ||| ||||| Sbjct: 25668203 cgtcgtcgagctccatgctccctaggcccggg-------atctgcccggagaatttggag 25668151 Query: 238 ccgtcgcccggtatccgggcctcctggatgatggccatgatctcctccaggctctgcggg 297 || || ||||| |||| |||||||| ||||||||||||||||||||||||| ||| | Sbjct: 25668150 ccatcacccggcttccgcgcctcctgtatgatggccatgatctcctccaggccctgtgac 25668091 Query: 298 ggcgcattgacgccgaccatgtgcaggctcatttggtactcgtcggtcatctcgatcggc 357 || | |||| | || ||| || | |||||| ||||||||||| ||||||||||||||| Sbjct: 25668090 ggggtgttgatgtcgttcatctggacgctcatctggtactcgtcagtcatctcgatcggc 25668031 Query: 358 agattcttgaggaaccacgggtggttctttatctc 392 || |||||||||||||| ||||||||||| ||||| Sbjct: 25668030 aggttcttgaggaaccatgggtggttcttgatctc 25667996 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 408 ttgctcggggtttgccacgaaaatccgggacagcaaatgtctgcactccattgaaa 463 |||||| |||||||||||||||||||||||||| | ||||||||| ||||| |||| Sbjct: 25667900 ttgctctgggtttgccacgaaaatccgggacagaagatgtctgcattccatcgaaa 25667845
>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0594D10 Length = 143200 Score = 155 bits (78), Expect = 2e-34 Identities = 226/275 (82%), Gaps = 8/275 (2%) Strand = Plus / Minus Query: 119 ctcgtcacaatgcgcacacgaagtctccgctgtcctcgacgtccgcgtcgacgtcgtnta 178 ||||||||||||||||||||||||| ||||||||||||||||| |||| || || | Sbjct: 122236 ctcgtcacaatgcgcacacgaagtcgccgctgtcctcgacgtcgatgtcgtcggtgtcaa 122177 Query: 179 tatcatcgagctccatgctccctag-cccgggcaccgacagctgcccggcgaacttggat 237 || |||||||||||||||||||| |||||| | |||||||| ||| ||||| Sbjct: 122176 cgtcgtcgagctccatgctccctaggcccggg-------atctgcccggagaatttggag 122124 Query: 238 ccgtcgcccggtatccgggcctcctggatgatggccatgatctcctccaggctctgcggg 297 || || ||||| |||| |||||||| ||||||||||||||||||||||||| ||| | Sbjct: 122123 ccatcacccggcttccgcgcctcctgtatgatggccatgatctcctccaggccctgtgac 122064 Query: 298 ggcgcattgacgccgaccatgtgcaggctcatttggtactcgtcggtcatctcgatcggc 357 || | |||| | || ||| || | |||||| ||||||||||| ||||||||||||||| Sbjct: 122063 ggggtgttgatgtcgttcatctggacgctcatctggtactcgtcagtcatctcgatcggc 122004 Query: 358 agattcttgaggaaccacgggtggttctttatctc 392 || |||||||||||||| ||||||||||| ||||| Sbjct: 122003 aggttcttgaggaaccatgggtggttcttgatctc 121969 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 408 ttgctcggggtttgccacgaaaatccgggacagcaaatgtctgcactccattgaaa 463 |||||| |||||||||||||||||||||||||| | ||||||||| ||||| |||| Sbjct: 121873 ttgctctgggtttgccacgaaaatccgggacagaagatgtctgcattccatcgaaa 121818
>gb|AY108950.1| Zea mays PCO069505 mRNA sequence Length = 1328 Score = 127 bits (64), Expect = 4e-26 Identities = 165/200 (82%) Strand = Plus / Minus Query: 331 tggtactcgtcggtcatctcgatcggcagattcttgaggaaccacgggtggttctttatc 390 ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||| Sbjct: 951 tggtactcgtcggtcatctcgatgggcagattcttgaggaaccacgggtgcttcttgatc 892 Query: 391 tcctggattgttattcgttgctcggggtttgccacgaaaatccgggacagcaaatgtctg 450 || | || ||||||| ||||| || ||| | || || ||||| ||||||| ||||| | Sbjct: 891 tcaggaatggttattctctgctcaggatttccaacaaatatccgagacagcagatgtccg 832 Query: 451 cactccattgaaatccggacgtaatcaggtactgagtattgnacactgagtatnctagna 510 |||||||||| || || ||||| || || | |||||| || ||||||||||| || | Sbjct: 831 cactccattgtaacgcgaacgtagtctggaattgagtactgtacactgagtattctcgtg 772 Query: 511 attgncttgcggaaattctt 530 || | ||||||||| ||||| Sbjct: 771 atcgtcttgcggaagttctt 752 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Minus Query: 251 tccgggcctcctggatgatggccatgatctcctccaggct 290 |||| |||||||||||||| ||||| | |||||||||||| Sbjct: 1031 tccgcgcctcctggatgatcgccatcacctcctccaggct 992
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 123 bits (62), Expect = 7e-25 Identities = 131/154 (85%) Strand = Plus / Plus Query: 239 cgtcgcccggtatccgggcctcctggatgatggccatgatctcctccaggctctgcgggg 298 ||||||||||| ||||||||||||| ||||| ||||||| ||||||||||||||||| | Sbjct: 15466840 cgtcgcccggtttccgggcctcctgaatgatcgccatgacctcctccaggctctgcgacg 15466899 Query: 299 gcgcattgacgccgaccatgtgcaggctcatttggtactcgtcggtcatctcgatcggca 358 ||| || | | | ||| |||| |||| | ||||||||||||||||||||||| |||| Sbjct: 15466900 gcgtgttcatgtccgccagctgcatgctcctctggtactcgtcggtcatctcgatgggca 15466959 Query: 359 gattcttgaggaaccacgggtggttctttatctc 392 | ||||| |||||||| ||||||||||| ||||| Sbjct: 15466960 ggttcttcaggaaccatgggtggttcttgatctc 15466993 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 123 tcacaatgcgcacacgaagtctccgctgtcctcga 157 |||||| |||||||||||||| ||||||| ||||| Sbjct: 15466721 tcacaaggcgcacacgaagtccccgctgttctcga 15466755 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 424 acgaaaatccgggacagcaaatgtctgca 452 ||||||||||||||||| | ||||||||| Sbjct: 15467148 acgaaaatccgggacaggagatgtctgca 15467176
>gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 genomic sequence, complete sequence Length = 164705 Score = 123 bits (62), Expect = 7e-25 Identities = 131/154 (85%) Strand = Plus / Minus Query: 239 cgtcgcccggtatccgggcctcctggatgatggccatgatctcctccaggctctgcgggg 298 ||||||||||| ||||||||||||| ||||| ||||||| ||||||||||||||||| | Sbjct: 34686 cgtcgcccggtttccgggcctcctgaatgatcgccatgacctcctccaggctctgcgacg 34627 Query: 299 gcgcattgacgccgaccatgtgcaggctcatttggtactcgtcggtcatctcgatcggca 358 ||| || | | | ||| |||| |||| | ||||||||||||||||||||||| |||| Sbjct: 34626 gcgtgttcatgtccgccagctgcatgctcctctggtactcgtcggtcatctcgatgggca 34567 Query: 359 gattcttgaggaaccacgggtggttctttatctc 392 | ||||| |||||||| ||||||||||| ||||| Sbjct: 34566 ggttcttcaggaaccatgggtggttcttgatctc 34533 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 123 tcacaatgcgcacacgaagtctccgctgtcctcga 157 |||||| |||||||||||||| ||||||| ||||| Sbjct: 34805 tcacaaggcgcacacgaagtccccgctgttctcga 34771 Score = 42.1 bits (21), Expect = 1.9 Identities = 65/80 (81%) Strand = Plus / Minus Query: 424 acgaaaatccgggacagcaaatgtctgcactccattgaaatccggacgtaatcaggtact 483 ||||||||||||||||| | ||||||||| ||| ||||| || ||||| || || | | Sbjct: 34378 acgaaaatccgggacaggagatgtctgcagtccgctgaaactcgaacgtagtctggaatt 34319 Query: 484 gagtattgnacactgagtat 503 || || || ||||||||||| Sbjct: 34318 gaatactgtacactgagtat 34299
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 123 bits (62), Expect = 7e-25 Identities = 131/154 (85%) Strand = Plus / Plus Query: 239 cgtcgcccggtatccgggcctcctggatgatggccatgatctcctccaggctctgcgggg 298 ||||||||||| ||||||||||||| ||||| ||||||| ||||||||||||||||| | Sbjct: 15461374 cgtcgcccggtttccgggcctcctgaatgatcgccatgacctcctccaggctctgcgacg 15461433 Query: 299 gcgcattgacgccgaccatgtgcaggctcatttggtactcgtcggtcatctcgatcggca 358 ||| || | | | ||| |||| |||| | ||||||||||||||||||||||| |||| Sbjct: 15461434 gcgtgttcatgtccgccagctgcatgctcctctggtactcgtcggtcatctcgatgggca 15461493 Query: 359 gattcttgaggaaccacgggtggttctttatctc 392 | ||||| |||||||| ||||||||||| ||||| Sbjct: 15461494 ggttcttcaggaaccatgggtggttcttgatctc 15461527 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 123 tcacaatgcgcacacgaagtctccgctgtcctcga 157 |||||| |||||||||||||| ||||||| ||||| Sbjct: 15461255 tcacaaggcgcacacgaagtccccgctgttctcga 15461289 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 424 acgaaaatccgggacagcaaatgtctgca 452 ||||||||||||||||| | ||||||||| Sbjct: 15461682 acgaaaatccgggacaggagatgtctgca 15461710
>gb|M94726.1|M94726 Triticum aestivum protein kinase mRNA, partial cds Length = 1210 Score = 79.8 bits (40), Expect = 9e-12 Identities = 115/140 (82%) Strand = Plus / Minus Query: 319 tgcaggctcatttggtactcgtcggtcatctcgatcggcagattcttgaggaaccacggg 378 |||| |||| |||||||||| ||||||||||| | |||| ||||||||||||| || Sbjct: 800 tgcatgctcctttggtactcatcggtcatctcaacgggcaatctcttgaggaaccatgga 741 Query: 379 tggttctttatctcctggattgttattcgttgctcggggtttgccacgaaaatccgggac 438 |||||||| |||||| |||| |||||||| |||| || ||| | |||||||| |||||| Sbjct: 740 tggttcttgatctccgggatggttattcgctgctgaggatttccaacgaaaatgcgggac 681 Query: 439 agcaaatgtctgcactccat 458 || | |||| |||| ||||| Sbjct: 680 agtagatgtatgcagtccat 661
>dbj|AB058923.1| Hordeum vulgare mRNA for protein kinase HvPKABA1, complete cds, cultivar:Himalaya Length = 1329 Score = 75.8 bits (38), Expect = 1e-10 Identities = 107/130 (82%) Strand = Plus / Minus Query: 329 tttggtactcgtcggtcatctcgatcggcagattcttgaggaaccacgggtggttcttta 388 ||||||||||||| |||||||| | ||||| ||||||||||| || |||||||| | Sbjct: 949 tttggtactcgtctgtcatctcaacgggcaggcgtttgaggaaccatggatggttcttga 890 Query: 389 tctcctggattgttattcgttgctcggggtttgccacgaaaatccgggacagcaaatgtc 448 ||||| |||| |||||||| |||| || ||| | |||||||| |||||||||| |||| Sbjct: 889 tctccgggatggttattcgctgctgaggatttccaacgaaaatgcgggacagcagatgta 830 Query: 449 tgcactccat 458 |||| ||||| Sbjct: 829 tgcaatccat 820
>emb|Z26846.1|MCGEPK M.crystallinum MCPK9 gene for protein kinase Length = 1371 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 370 aaccacgggtggttctttatctcctggattgttattcgttgctcggggtttgccacgaaa 429 |||||||||||||| ||||| || | |||||||||| | || ||||| ||||| || Sbjct: 897 aaccacgggtggttttttatttctggaattgttattctcttttcagggttggccacaaat 838 Query: 430 atccgggacagcaaatgtctgcactccattgaaat 464 || ||||| |||| ||||||||||||||||||||| Sbjct: 837 atacgggatagcagatgtctgcactccattgaaat 803
>gb|U29095.1|U29095 Triticum aestivum serine-threonine protein kinase (TaPK3) gene, exons 3 through 9 and complete cds Length = 2250 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 319 tgcaggctcatttggtactcgtcggtcatctcgatcggcagattcttgaggaaccacggg 378 |||| |||| |||||||||| ||||||||||| | ||||| | ||||||||||| || Sbjct: 1756 tgcatgctcctttggtactcatcggtcatctcaacgggcagttgtttgaggaaccatgga 1697 Query: 379 tggttctttatctcctggattgttattcg 407 |||||||| |||||| | || |||||||| Sbjct: 1696 tggttcttgatctccggcatggttattcg 1668
>dbj|AB058924.1| Hordeum vulgare gene for protein kinase HvPKABA1, complete cds, cultivar:Igri Length = 11684 Score = 54.0 bits (27), Expect = 5e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 329 tttggtactcgtcggtcatctcgatcggcagattcttgaggaaccacgggtggttcttta 388 ||||||||||||| |||||||| | ||||| ||||||||||| || |||||||| | Sbjct: 10562 tttggtactcgtctgtcatctcaacgggcaggcgtttgaggaaccatggatggttcttga 10503 Query: 389 tctcctggattgttattcg 407 ||||| |||| |||||||| Sbjct: 10502 tctccgggatggttattcg 10484
>ref|XM_474469.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1113 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 354 cggcagattcttgaggaaccacgggtggttctttatctc 392 |||||| |||||||||||||| |||||| |||| ||||| Sbjct: 795 cggcaggttcttgaggaaccaggggtggctcttgatctc 757
>emb|AL606656.3|OSJN00099 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0020J19, complete sequence Length = 123272 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 354 cggcagattcttgaggaaccacgggtggttctttatctc 392 |||||| |||||||||||||| |||||| |||| ||||| Sbjct: 5464 cggcaggttcttgaggaaccaggggtggctcttgatctc 5426
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 354 cggcagattcttgaggaaccacgggtggttctttatctc 392 |||||| |||||||||||||| |||||| |||| ||||| Sbjct: 35380661 cggcaggttcttgaggaaccaggggtggctcttgatctc 35380623
>dbj|AB125306.1| Oryza sativa (japonica cultivar-group) SAPK5 mRNA for serine/threonine protein kinase SAPK5, complete cds Length = 1604 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 354 cggcagattcttgaggaaccacgggtggttctttatctc 392 |||||| |||||||||||||| |||||| |||| ||||| Sbjct: 928 cggcaggttcttgaggaaccaggggtggctcttgatctc 890
>dbj|AK100269.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065E10, full insert sequence Length = 1636 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 354 cggcagattcttgaggaaccacgggtggttctttatctc 392 |||||| |||||||||||||| |||||| |||| ||||| Sbjct: 960 cggcaggttcttgaggaaccaggggtggctcttgatctc 922
>emb|AL732342.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0518A01, complete sequence Length = 32686 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 354 cggcagattcttgaggaaccacgggtggttctttatctc 392 |||||| |||||||||||||| |||||| |||| ||||| Sbjct: 12416 cggcaggttcttgaggaaccaggggtggctcttgatctc 12378
>ref|NM_197777.1| Oryza sativa (japonica cultivar-group) protein kinase REK (OSJNBa0027P10.6), mRNA Length = 1341 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Minus Query: 355 ggcagattcttgaggaaccacgggtggttctttatctc 392 ||||||||||| || ||||||| ||| ||||||||||| Sbjct: 797 ggcagattcttcagaaaccacgtgtgcttctttatctc 760
>emb|BX294012.1|NC80A10 Neurospora crassa DNA linkage group V Cosmid contig 80A10 Length = 161126 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 354 cggcagattcttgaggaaccacgggt 379 |||||||| ||||||||||||||||| Sbjct: 20259 cggcagatccttgaggaaccacgggt 20234
>gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 genomic sequence, complete sequence Length = 141307 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 355 ggcagattcttgaggaaccacgggtggttctttatctc 392 ||||||||||| || ||||||| ||| ||||||||||| Sbjct: 90387 ggcagattcttcagaaaccacgtgtgcttctttatctc 90424
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 355 ggcagattcttgaggaaccacgggtggttctttatctc 392 ||||||||||| || ||||||| ||| ||||||||||| Sbjct: 21775704 ggcagattcttcagaaaccacgtgtgcttctttatctc 21775741
>dbj|AB125304.1| Oryza sativa (japonica cultivar-group) SAPK3 mRNA for serine/threonine protein kinase SAPK3, complete cds Length = 1304 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Minus Query: 355 ggcagattcttgaggaaccacgggtggttctttatctc 392 ||||||||||| || ||||||| ||| ||||||||||| Sbjct: 917 ggcagattcttcagaaaccacgtgtgcttctttatctc 880
>gb|AY037858.1| Cercopithicine herpesvirus 15 strain LCL8664, complete genome Length = 171096 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 252 ccgggcctcctggatgatggcc 273 |||||||||||||||||||||| Sbjct: 47363 ccgggcctcctggatgatggcc 47384
>dbj|AK103690.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136G23, full insert sequence Length = 1304 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Minus Query: 355 ggcagattcttgaggaaccacgggtggttctttatctc 392 ||||||||||| || ||||||| ||| ||||||||||| Sbjct: 917 ggcagattcttcagaaaccacgtgtgcttctttatctc 880
>dbj|AK059800.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-F10, full insert sequence Length = 1189 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Minus Query: 355 ggcagattcttgaggaaccacgggtggttctttatctc 392 ||||||||||| || ||||||| ||| ||||||||||| Sbjct: 663 ggcagattcttcagaaaccacgtgtgcttctttatctc 626
>dbj|AB002109.1| Oryza sativa DNA for protein kinase, complete cds Length = 3678 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Minus Query: 355 ggcagattcttgaggaaccacgggtggttctttatctc 392 ||||||||||| || ||||||| ||| ||||||||||| Sbjct: 3319 ggcagattcttcagaaaccacgtgtgcttctttatctc 3282
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 355 ggcagattcttgaggaaccacgggtggttctttatctc 392 ||||||||||| || ||||||| ||| ||||||||||| Sbjct: 21787367 ggcagattcttcagaaaccacgtgtgcttctttatctc 21787404
>dbj|D88399.1| Oryza sativa mRNA for endosperm kinase, complete cds Length = 1186 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Minus Query: 355 ggcagattcttgaggaaccacgggtggttctttatctc 392 ||||||||||| || ||||||| ||| ||||||||||| Sbjct: 797 ggcagattcttcagaaaccacgtgtgcttctttatctc 760
>ref|XM_783071.1| PREDICTED: Strongylocentrotus purpuratus similar to Ankyrin-1 (Erythrocyte ankyrin) (LOC583146), partial mRNA Length = 953 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 gcaggctcatttggtactcgt 340 ||||||||||||||||||||| Sbjct: 29 gcaggctcatttggtactcgt 9
>ref|XM_789569.1| PREDICTED: Strongylocentrotus purpuratus similar to Ankyrin-3 (ANK-3) (Ankyrin G) (LOC589942), partial mRNA Length = 3374 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 gcaggctcatttggtactcgt 340 ||||||||||||||||||||| Sbjct: 29 gcaggctcatttggtactcgt 9
>gb|AC023279.2|AC023279 Genomic sequence for Arabidopsis thaliana BAC F12K21 from chromosome I, complete sequence Length = 117585 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 aacacatgtaatcatacaaca 23 ||||||||||||||||||||| Sbjct: 4659 aacacatgtaatcatacaaca 4639
>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia Length = 1923819 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 225 ggcgaacttggatccgtcgcc 245 ||||||||||||||||||||| Sbjct: 1415079 ggcgaacttggatccgtcgcc 1415099
>gb|AC007894.2|F21H2 Arabidopsis thaliana chromosome 1 BAC F21H2 sequence, complete sequence Length = 88512 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 aacacatgtaatcatacaaca 23 ||||||||||||||||||||| Sbjct: 68935 aacacatgtaatcatacaaca 68915
>emb|AJ871581.1| Streptomyces achromogenes subsp. rubradiris complete rubradirin gene cluster, strain NRRL 3061 Length = 105657 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 tgtcctcgacgtccgcgtcga 169 ||||||||||||||||||||| Sbjct: 31746 tgtcctcgacgtccgcgtcga 31726
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 cctcgacgtccgcgtcgacg 171 |||||||||||||||||||| Sbjct: 1576081 cctcgacgtccgcgtcgacg 1576062
>gb|DQ279927.1| Human herpesvirus 4 strain AG876, complete genome Length = 172764 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gggcctcctggatgatggcc 273 |||||||||||||||||||| Sbjct: 53667 gggcctcctggatgatggcc 53686
>ref|XM_789514.1| PREDICTED: Strongylocentrotus purpuratus similar to solute carrier family 43, member 2 (LOC589884), mRNA Length = 1404 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 cgacgtccgcgtcgacgtcg 174 |||||||||||||||||||| Sbjct: 717 cgacgtccgcgtcgacgtcg 736
>gb|AC095504.7| Rattus norvegicus 2 BAC CH230-7P18 (Children's Hospital Oakland Research Institute) complete sequence Length = 227012 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 gtggttctttatctcctgga 397 |||||||||||||||||||| Sbjct: 138710 gtggttctttatctcctgga 138729
>gb|AC048383.25| Homo sapiens chromosome 15, clone RP11-543G18, complete sequence Length = 192235 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 caaacacaaaggccacaccaccag 99 |||||| ||||||||||||||||| Sbjct: 191876 caaacataaaggccacaccaccag 191899
>emb|AL645570.13| Mouse DNA sequence from clone RP23-377H12 on chromosome 11 Contains two novel genes, the 3' end of the Meis1 gene for myeloid ecotropic viral integration site 1 and two CpG islands, complete sequence Length = 190198 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 caaaggccacaccaccagag 101 |||||||||||||||||||| Sbjct: 157183 caaaggccacaccaccagag 157164
>dbj|AB001103.2| Homo sapiens gene for H-cadherin, complete cds Length = 9069 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 41 gaaacaaacgacacaacagaagga 64 ||||||||||| |||||||||||| Sbjct: 2504 gaaacaaacgaaacaacagaagga 2481
>gb|AF448803.1|AF448803 Human herpesvirus 4 BPLF-1 mRNA, partial cds Length = 1532 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 gggcctcctggatgatggcc 273 |||||||||||||||||||| Sbjct: 258 gggcctcctggatgatggcc 239
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 205 ccgggcaccgacagctgcccggcg 228 ||||||||||||||| |||||||| Sbjct: 4126633 ccgggcaccgacagcagcccggcg 4126610
>emb|BX470158.9| Zebrafish DNA sequence from clone CH211-113P5 in linkage group 8, complete sequence Length = 119483 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 tctttatctcctggattgtt 402 |||||||||||||||||||| Sbjct: 54686 tctttatctcctggattgtt 54705
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 369 gaaccacgggtggttctttatctc 392 |||||| ||||||||||||||||| Sbjct: 24493420 gaaccatgggtggttctttatctc 24493443
>gb|AC098804.6| Homo sapiens chromosome 16 clone RP11-244P19, complete sequence Length = 62309 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 gaaacaaacgacacaacagaagga 64 ||||||||||| |||||||||||| Sbjct: 61766 gaaacaaacgaaacaacagaagga 61789
>gb|AF448220.1| Human herpesvirus 4 BPLF1 gene, complete cds Length = 9540 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gggcctcctggatgatggcc 273 |||||||||||||||||||| Sbjct: 3762 gggcctcctggatgatggcc 3781
>gb|AC011648.12| Homo sapiens chromosome 15, clone RP11-15F13, complete sequence Length = 107336 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 caaacacaaaggccacaccaccag 99 |||||| ||||||||||||||||| Sbjct: 20068 caaacataaaggccacaccaccag 20091
>dbj|AB125310.1| Oryza sativa (japonica cultivar-group) SAPK9 mRNA for serine/threonine protein kinase SAPK9, complete cds Length = 1519 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 369 gaaccacgggtggttctttatctc 392 |||||| ||||||||||||||||| Sbjct: 882 gaaccatgggtggttctttatctc 859
>dbj|AK069697.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023028J06, full insert sequence Length = 1641 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 369 gaaccacgggtggttctttatctc 392 |||||| ||||||||||||||||| Sbjct: 1046 gaaccatgggtggttctttatctc 1023
>emb|V01555.2|EBV Epstein-Barr virus (EBV) genome, strain B95-8 Length = 172281 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gggcctcctggatgatggcc 273 |||||||||||||||||||| Sbjct: 65839 gggcctcctggatgatggcc 65858
>gb|AF059718.1|AF059718 Nelson Bay virus segment S2 major inner capsid protein sigma 1 gene, complete cds Length = 1322 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 ccagagggaaaccatcacgc 115 |||||||||||||||||||| Sbjct: 669 ccagagggaaaccatcacgc 650
>emb|AL355076.5|CNS05TCA Human chromosome 14 DNA sequence BAC C-2509G16 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 215936 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 tgcaggctcatttggtactc 338 |||||||||||||||||||| Sbjct: 32216 tgcaggctcatttggtactc 32197
>gb|AY961628.3| Human herpesvirus 4 strain GD1, complete genome Length = 171657 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gggcctcctggatgatggcc 273 |||||||||||||||||||| Sbjct: 53486 gggcctcctggatgatggcc 53505
>gb|AC174761.1| Gasterosteus aculeatus clone VMRC26-231K14, complete sequence Length = 162397 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tgaacccattacaaacacaa 84 |||||||||||||||||||| Sbjct: 154626 tgaacccattacaaacacaa 154607
>emb|AJ507799.2|HHV507799 Human herpesvirus 4 complete wild type genome Length = 171823 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gggcctcctggatgatggcc 273 |||||||||||||||||||| Sbjct: 53551 gggcctcctggatgatggcc 53570
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 369 gaaccacgggtggttctttatctc 392 |||||| ||||||||||||||||| Sbjct: 24421626 gaaccatgggtggttctttatctc 24421649
>emb|AL844880.3|CNS08CB3 Oryza sativa chromosome 12, . BAC OSJNBb0049H14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 120071 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 369 gaaccacgggtggttctttatctc 392 |||||| ||||||||||||||||| Sbjct: 64451 gaaccatgggtggttctttatctc 64474
>gb|DQ295068.1| Secale cereale PKABA1 gene, partial sequence Length = 1082 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 376 gggtggttctttatctcctggattgttattcg 407 ||||||||||| |||||| |||| |||||||| Sbjct: 1081 gggtggttcttgatctccgggatggttattcg 1050
>gb|M80517.1|HS4B958RAJ Epstein-Barr virus, artifactual joining of B95-8 complete genome and the sequences from Raji of the large deletion found in B95-8 Length = 184113 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gggcctcctggatgatggcc 273 |||||||||||||||||||| Sbjct: 65839 gggcctcctggatgatggcc 65858
>gb|AC125793.2| Homo sapiens chromosome 16 clone CTD-3253I12, complete sequence Length = 117647 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 41 gaaacaaacgacacaacagaagga 64 ||||||||||| |||||||||||| Sbjct: 113277 gaaacaaacgaaacaacagaagga 113254 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,259,518 Number of Sequences: 3902068 Number of extensions: 3259518 Number of successful extensions: 57235 Number of sequences better than 10.0: 73 Number of HSP's better than 10.0 without gapping: 73 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 56949 Number of HSP's gapped (non-prelim): 280 length of query: 557 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 534 effective length of database: 17,143,297,704 effective search space: 9154520973936 effective search space used: 9154520973936 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)