Clone Information

BLAST Search Result

Clone Name	rbaal33f17
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	APOD_MOUSE (P51910) Apolipoprotein D precursor (Apo-D) (ApoD)	51	3e-06
2	APOD_HUMAN (P05090) Apolipoprotein D precursor (Apo-D) (ApoD)	46	9e-05
3	PTGDS_MACFU (Q9TUI1) Prostaglandin-H2 D-isomerase precursor (EC ...	39	0.018
4	APOD_MACFA (Q8SPI0) Apolipoprotein D precursor (Apo-D) (ApoD)	38	0.023
5	PTGDS_HORSE (O97921) Prostaglandin-H2 D-isomerase precursor (EC ...	38	0.023
6	PTGDS_PONPY (Q8WNM0) Prostaglandin-H2 D-isomerase precursor (EC ...	37	0.040
7	PTGDS_HUMAN (P41222) Prostaglandin-H2 D-isomerase precursor (EC ...	37	0.040
8	APOD_RAT (P23593) Apolipoprotein D precursor (Apo-D) (ApoD)	37	0.040
9	PTGDS_GORGO (Q8WNM1) Prostaglandin-H2 D-isomerase precursor (EC ...	37	0.052
10	APOD_CAVPO (P51909) Apolipoprotein D precursor (Apo-D) (ApoD)	37	0.068
11	PTGDS_FELCA (Q29487) Prostaglandin-H2 D-isomerase precursor (EC ...	37	0.068
12	PTGDS_URSAR (Q29562) Prostaglandin-H2 D-isomerase precursor (EC ...	36	0.088
13	PTGDS_CANFA (Q9XS65) Prostaglandin-H2 D-isomerase precursor (EC ...	36	0.088
14	APOD_RABIT (P37153) Apolipoprotein D precursor (Apo-D) (ApoD)	36	0.088
15	BLG4_BLAGE (P54962) Allergen Bla g 4 precursor (Bla g IV) (Fragm...	34	0.44
16	PTGDS_SHEEP (Q9XSM0) Prostaglandin-H2 D-isomerase precursor (EC ...	33	0.57
17	EXFAB_COTJA (Q9I9P7) Extracellular fatty acid-binding protein pr...	33	0.75
18	RUSC2_MOUSE (Q80U22) RUN and SH3 domain-containing protein 2	33	0.98
19	CRA2_HOMGA (P80007) Crustacyanin-A2 subunit	33	0.98
20	NHR18_CAEEL (O16360) Nuclear hormone receptor family member nhr-18	32	1.3
21	PTGDS_PIG (Q29095) Prostaglandin-H2 D-isomerase precursor (EC 5....	32	1.3
22	PTGDS_BOVIN (O02853) Prostaglandin-H2 D-isomerase precursor (EC ...	32	1.7
23	LAZA_SCHAM (P49291) Lazarillo protein precursor	32	1.7
24	ISW1_YEAST (P38144) Chromatin remodelling complex ATPase chain I...	32	2.2
25	CRC1_HOMGA (P80029) Crustacyanin-C1 subunit	31	2.8
26	CRA1_HOMGA (P58989) Crustacyanin-A1 subunit	31	2.8
27	PURP_CHICK (P08938) Purpurin precursor	31	2.8
28	VL2_HPV55 (Q80939) Minor capsid protein L2	31	2.8
29	MFRP_MOUSE (Q8K480) Membrane frizzled-related protein (Membrane-...	31	2.8
30	NGAL_MOUSE (P11672) Neutrophil gelatinase-associated lipocalin p...	31	3.7
31	COMD5_RAT (Q9ERR2) COMM domain-containing protein 5 (Hypertensio...	31	3.7
32	YFCB_SALTY (P0A293) Hypothetical adenine-specific methylase yfcB...	31	3.7
33	YFCB_SALTI (P0A294) Hypothetical adenine-specific methylase yfcB...	31	3.7
34	YAN4_SCHPO (Q10070) Hypothetical protein C3H1.04c in chromosome I	30	4.9
35	FOS_AVINK (P23050) p55-v-Fos transforming protein	30	4.9
36	MYT1_HUMAN (Q01538) Myelin transcription factor 1 (MyT1) (MyTI) ...	30	4.9
37	COMD5_MOUSE (Q8R395) COMM domain-containing protein 5	30	4.9
38	FOS_PIG (O97930) Proto-oncogene protein c-fos (Cellular oncogene...	30	4.9
39	EXFAB_CHICK (P21760) Extracellular fatty acid-binding protein pr...	30	4.9
40	FOS_CHICK (P11939) Proto-oncogene protein c-fos (Cellular oncoge...	30	4.9
41	YFCB_ECOLI (P39199) Hypothetical adenine-specific methylase yfcB...	30	6.3
42	MUP3_MOUSE (P04939) Major urinary protein 3 precursor (MUP 3) (N...	30	8.3
43	RUSC2_HUMAN (Q8N2Y8) RUN and SH3 domain-containing protein 2	30	8.3

>APOD_MOUSE (P51910) Apolipoprotein D precursor (Apo-D) (ApoD)|
          Length = 189

 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 40/145 (27%), Positives = 55/145 (37%), Gaps = 6/145 (4%)
 Frame = -3

Query: 647 EDCHCTQGVYTFDEKAGAIKVETFCVHGSPDGYITGIRGKVQCLSQEDMASAETDLEKEE 468
           E  +C Q  Y+  E      +E      SPDG +  ++G+                 K+ 
Sbjct: 57  EKGNCIQANYSLMENGN---IEVLNKELSPDGTMNQVKGEA----------------KQS 97

Query: 467 MISSKCFLRFPTLPFIPKLPYDVLATDYDNYAVVSGAK------DTSFIQIYSRTPNPGP 306
            +S    L     P +P  PY +LATDY+NYA+V             F+ I  R P   P
Sbjct: 98  NVSEPAKLEVQFFPLMPPAPYWILATDYENYALVYSCTTFFWLFHVDFVWILGRNPYLPP 157

Query: 305 EFIEKYKSYAAGFGYDPSKIKDTPQ 231
           E I   K      G D  K+  T Q
Sbjct: 158 ETITYLKDILTSNGIDIEKMTTTDQ 182

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>APOD_HUMAN (P05090) Apolipoprotein D precursor (Apo-D) (ApoD)|
          Length = 189

 Score = 46.2 bits (108), Expect = 9e-05
 Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 10/111 (9%)
 Frame = -3

Query: 533 GKVQCLSQEDMASAETDLEKEEM----ISSKCFLRFPTLPFIPKLPYDVLATDYDNYAVV 366
           GK++ L+QE  A    +  + E     ++    L      F+P  PY +LATDY+NYA+V
Sbjct: 72  GKIKVLNQELRADGTVNQIEGEATPVNLTEPAKLEVKFSWFMPSAPYWILATDYENYALV 131

Query: 365 SGAK------DTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKDTPQ 231
                        F  I +R PN  PE ++  K+       D  K+  T Q
Sbjct: 132 YSCTCIIQLFHVDFAWILARNPNLPPETVDSLKNILTSNNIDVKKMTVTDQ 182

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>PTGDS_MACFU (Q9TUI1) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)|
           (Lipocalin-type prostaglandin-D synthase)
           (Glutathione-independent PGD synthetase)
           (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2)
           (PGDS)
          Length = 190

 Score = 38.5 bits (88), Expect = 0.018
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
 Frame = -3

Query: 401 VLATDYDNYAVV--SGAK----DTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 240
           V+ TDYD+YA++   G+K    D     +YSRT  P  E  EK+ ++    G+    I  
Sbjct: 120 VVETDYDHYALLYSQGSKGPGEDFRMATLYSRTQTPRAELKEKFSAFCKAQGFTEDSIVF 179

Query: 239 TPQDCEVSSDQ 207
            PQ  +  ++Q
Sbjct: 180 LPQTDKCMTEQ 190

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>APOD_MACFA (Q8SPI0) Apolipoprotein D precursor (Apo-D) (ApoD)|
          Length = 189

 Score = 38.1 bits (87), Expect = 0.023
 Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 10/112 (8%)
 Frame = -3

Query: 533 GKVQCLSQEDMASAETDLEKEEM----ISSKCFLRFPTLPFIPKLPYDVLATDYDNYAVV 366
           GK++ L+QE  A    +  + E     I+    L      F+P  PY VLATDY+NYA+V
Sbjct: 72  GKIKVLNQELRADGTVNQIEGEASPVNITEPAKLEVKFFWFMPSAPYWVLATDYENYALV 131

Query: 365 SGAKD------TSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKDTPQD 228
                        +  I +R  +   E ++  K+       D  K+  T Q+
Sbjct: 132 YSCVSIINLFRVDYAWILARNRHLPSETVDFLKNILTSNNIDVKKMTVTDQE 183

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>PTGDS_HORSE (O97921) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)|
           (Lipocalin-type prostaglandin-D synthase)
           (Glutathione-independent PGD synthetase)
           (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2)
           (PGDS)
          Length = 194

 Score = 38.1 bits (87), Expect = 0.023
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 9/66 (13%)
 Frame = -3

Query: 401 VLATDYDNYAVVS---------GAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSK 249
           V+ TDY+ YA++          G +D     +YSR  +P PE  EK+ ++A   G+    
Sbjct: 120 VVETDYEEYALLYTHAESTKGLGGQDFRMATLYSRVQSPRPEVKEKFSTFAKAQGFTEDA 179

Query: 248 IKDTPQ 231
           I   PQ
Sbjct: 180 IVFLPQ 185

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>PTGDS_PONPY (Q8WNM0) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)|
           (Lipocalin-type prostaglandin-D synthase)
           (Glutathione-independent PGD synthetase)
           (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2)
           (PGDS)
          Length = 190

 Score = 37.4 bits (85), Expect = 0.040
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
 Frame = -3

Query: 401 VLATDYDNYAVV--SGAK----DTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 240
           V+ TDYD YA++   G+K    D     +YSRT  P  E  EK+ ++    G+    I  
Sbjct: 120 VVETDYDQYALLYSQGSKGPGEDFRMATLYSRTQTPRAELKEKFTAFCKAQGFTEDTIVF 179

Query: 239 TPQDCEVSSDQ 207
            PQ  +  ++Q
Sbjct: 180 LPQTDKCMTEQ 190

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>PTGDS_HUMAN (P41222) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)|
           (Lipocalin-type prostaglandin-D synthase)
           (Glutathione-independent PGD synthetase)
           (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2)
           (PGDS) (Beta-trace protein) (Cerebrin-28)
          Length = 190

 Score = 37.4 bits (85), Expect = 0.040
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
 Frame = -3

Query: 401 VLATDYDNYAVV--SGAK----DTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 240
           V+ TDYD YA++   G+K    D     +YSRT  P  E  EK+ ++    G+    I  
Sbjct: 120 VVETDYDQYALLYSQGSKGPGEDFRMATLYSRTQTPRAELKEKFTAFCKAQGFTEDTIVF 179

Query: 239 TPQDCEVSSDQ 207
            PQ  +  ++Q
Sbjct: 180 LPQTDKCMTEQ 190

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>APOD_RAT (P23593) Apolipoprotein D precursor (Apo-D) (ApoD)|
          Length = 189

 Score = 37.4 bits (85), Expect = 0.040
 Identities = 38/145 (26%), Positives = 54/145 (37%), Gaps = 6/145 (4%)
 Frame = -3

Query: 647 EDCHCTQGVYTFDEKAGAIKVETFCVHGSPDGYITGIRGKVQCLSQEDMASAETDLEKEE 468
           E  +C Q  Y+  E  G IKV    +   PDG +  + G+                 K+ 
Sbjct: 57  EKGNCIQANYSLMEN-GNIKVLNKELR--PDGTLNQVEGEA----------------KQS 97

Query: 467 MISSKCFLRFPTLPFIPKLPYDVLATDYDNYAVVSGAK------DTSFIQIYSRTPNPGP 306
            +S    L       +P  PY +LATDY++YA+V             ++ I  R P   P
Sbjct: 98  NMSEPAKLEVQFFSLMPPAPYWILATDYESYALVYSCTTFFWFFHVDYVWILGRNPYLPP 157

Query: 305 EFIEKYKSYAAGFGYDPSKIKDTPQ 231
           E I   K        D +KI    Q
Sbjct: 158 ETITYLKYILTSNDIDIAKITTKDQ 182

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>PTGDS_GORGO (Q8WNM1) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)|
           (Lipocalin-type prostaglandin-D synthase)
           (Glutathione-independent PGD synthetase)
           (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2)
           (PGDS)
          Length = 190

 Score = 37.0 bits (84), Expect = 0.052
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
 Frame = -3

Query: 401 VLATDYDNYAVV--SGAK----DTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 240
           V+ TDYD YA++   G+K    D     +YSRT  P  E  EK+ ++    G+    I  
Sbjct: 120 VVETDYDQYALLYSQGSKGPGEDFRMATLYSRTQTPRAELKEKFTAFCKAQGFTEDTIVF 179

Query: 239 TPQDCEVSSDQ 207
            PQ  +  ++Q
Sbjct: 180 LPQTDKCLTEQ 190

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>APOD_CAVPO (P51909) Apolipoprotein D precursor (Apo-D) (ApoD)|
          Length = 189

 Score = 36.6 bits (83), Expect = 0.068
 Identities = 27/94 (28%), Positives = 41/94 (43%)
 Frame = -3

Query: 647 EDCHCTQGVYTFDEKAGAIKVETFCVHGSPDGYITGIRGKVQCLSQEDMASAETDLEKEE 468
           E  +C Q  Y+  E     +V+       PDG +  I G+          +  +++ +  
Sbjct: 57  EKGNCIQANYSLKENG---RVKVLNQELRPDGTVNQIEGE----------ATHSNITEPA 103

Query: 467 MISSKCFLRFPTLPFIPKLPYDVLATDYDNYAVV 366
            +  K F        +P  PY VLATDYDNYA+V
Sbjct: 104 KLGVKFF------QLMPSAPYWVLATDYDNYALV 131

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>PTGDS_FELCA (Q29487) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)|
           (Lipocalin-type prostaglandin-D synthase)
           (Glutathione-independent PGD synthetase)
           (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2)
           (PGDS)
          Length = 191

 Score = 36.6 bits (83), Expect = 0.068
 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
 Frame = -3

Query: 401 VLATDYDNYAVV------SGAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 240
           V+ATDY+ YA++      S  +D     +YSRT  P  E  EK+ ++A   G+    I  
Sbjct: 120 VVATDYEEYALLYTAGTKSPGQDFHMATLYSRTQTPRAEVKEKFSTFAKTRGFTEDAIVF 179

Query: 239 TPQ 231
            P+
Sbjct: 180 LPK 182

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>PTGDS_URSAR (Q29562) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)|
           (Lipocalin-type prostaglandin-D synthase)
           (Glutathione-independent PGD synthetase)
           (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2)
           (PGDS)
          Length = 191

 Score = 36.2 bits (82), Expect = 0.088
 Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
 Frame = -3

Query: 401 VLATDYDNYAVV--SGAK----DTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 240
           V  TDYD YA++  +G K    D     +YSRT  P  E  EK+ ++A   G+    I  
Sbjct: 120 VAMTDYDEYALLYTTGTKGLGQDFHMATLYSRTQTPRAEIKEKFTTFAKTQGFTEDAIVF 179

Query: 239 TPQ 231
            PQ
Sbjct: 180 LPQ 182

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>PTGDS_CANFA (Q9XS65) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)|
           (Lipocalin-type prostaglandin-D synthase)
           (Glutathione-independent PGD synthetase)
           (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2)
           (PGDS)
          Length = 191

 Score = 36.2 bits (82), Expect = 0.088
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
 Frame = -3

Query: 401 VLATDYDNYAVV--SGAK----DTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 240
           V+AT+Y+ YA++  +G+K    D     +YSRT  P  E  EK+ ++A   G+    I  
Sbjct: 120 VVATNYEEYALLYTAGSKGLGQDFHMATLYSRTQTPKAEIKEKFSTFAKTQGFTEDAIVF 179

Query: 239 TPQ 231
            PQ
Sbjct: 180 LPQ 182

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>APOD_RABIT (P37153) Apolipoprotein D precursor (Apo-D) (ApoD)|
          Length = 189

 Score = 36.2 bits (82), Expect = 0.088
 Identities = 31/94 (32%), Positives = 44/94 (46%)
 Frame = -3

Query: 647 EDCHCTQGVYTFDEKAGAIKVETFCVHGSPDGYITGIRGKVQCLSQEDMASAETDLEKEE 468
           E  +C Q  Y+  E  G IKV    +   PDG +  I G+          + +++L +  
Sbjct: 58  EKGNCIQANYSLMEN-GNIKVLNQELR--PDGTVNQIEGQ----------ATQSNLTEPA 104

Query: 467 MISSKCFLRFPTLPFIPKLPYDVLATDYDNYAVV 366
            +  K F   PT P      Y VLATDY+NYA+V
Sbjct: 105 KLGVKFFQLMPTAP------YWVLATDYENYALV 132

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>BLG4_BLAGE (P54962) Allergen Bla g 4 precursor (Bla g IV) (Fragment)|
          Length = 182

 Score = 33.9 bits (76), Expect = 0.44
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -3

Query: 410 PYDVLATDYDNYAVVSG 360
           PY VLATDY+NYA+V G
Sbjct: 101 PYSVLATDYENYAIVEG 117

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>PTGDS_SHEEP (Q9XSM0) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)|
           (Lipocalin-type prostaglandin-D synthase)
           (Glutathione-independent PGD synthetase)
           (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2)
           (PGDS)
          Length = 191

 Score = 33.5 bits (75), Expect = 0.57
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
 Frame = -3

Query: 401 VLATDYDNYAVV------SGAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 240
           V  TDY+ YA++          D+    +YSRT  P  E  EK+ ++A   G+    I  
Sbjct: 120 VAETDYETYALLYTESVRGPGPDSLMATLYSRTQTPRAEVKEKFTTFARSLGFTEEGIVF 179

Query: 239 TPQ 231
            P+
Sbjct: 180 LPK 182

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>EXFAB_COTJA (Q9I9P7) Extracellular fatty acid-binding protein precursor|
           (Ex-FABP) (Lipocalin Q83)
          Length = 178

 Score = 33.1 bits (74), Expect = 0.75
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
 Frame = -3

Query: 416 KLPYDVLATDYDNYAV-----VSGAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPS 252
           K   +VL TDY +YAV     V   +    +++YSR+P   P     ++  A    Y   
Sbjct: 103 KKKVEVLDTDYKSYAVIYATRVKDGRTLHMMRLYSRSPEVSPAATAIFRKLAGERNYTDE 162

Query: 251 KIKDTPQDCEVSSDQL 204
            +   P+  E + D++
Sbjct: 163 MVAMLPRQEECTVDEV 178

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>RUSC2_MOUSE (Q80U22) RUN and SH3 domain-containing protein 2|
          Length = 1514

 Score = 32.7 bits (73), Expect = 0.98
 Identities = 19/44 (43%), Positives = 22/44 (50%)
 Frame = -2

Query: 294  EVQVICCRLRLRPEQDQGHAAGLRGVLGPASADDVYARDGRGPD 163
            EVQ +C  L   P Q   H   +  VLGPA  D  + R  RGPD
Sbjct: 1449 EVQALCHHLATGPGQLSFHKGDILRVLGPARGD--WLRCSRGPD 1490

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>CRA2_HOMGA (P80007) Crustacyanin-A2 subunit|
          Length = 174

 Score = 32.7 bits (73), Expect = 0.98
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
 Frame = -3

Query: 428 PFIPKLPYDVLATDYDNYAVVSGAKDT-----SFIQIYSRTPNPGPEFIEK 291
           P +   PY+V+ TDY+ Y+ V     T      F  ++SRTP      +EK
Sbjct: 96  PSVFAAPYEVIETDYETYSCVYSCITTDNYKSEFAFVFSRTPQTSGPAVEK 146

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>NHR18_CAEEL (O16360) Nuclear hormone receptor family member nhr-18|
          Length = 394

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
 Frame = -3

Query: 527 VQCLSQEDMASAETDLEKEEMIS-SKCFLRFPTLPFIPKLPYDVLATDYDNYAVVSGAKD 351
           + C   +  +  +T ++   +++ ++  L+ PT   +P    + LAT  DN   V   K+
Sbjct: 107 ILCCEPDRASVLKTTIDVTRLVNIARDMLQKPTNHVLPSNSLEQLATTLDNMRCVESNKE 166

Query: 350 TSFIQIYSRTPNPGPEFIEKYKSYAAGF 267
             FI+ Y +        +E  KS+  GF
Sbjct: 167 VKFIEKYGK--------VETLKSWEQGF 186

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>PTGDS_PIG (Q29095) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)|
           (Lipocalin-type prostaglandin-D synthase)
           (Glutathione-independent PGD synthetase)
           (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2)
           (PGDS)
          Length = 189

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
 Frame = -3

Query: 413 LPYDVLATDYDNYAVVSGAKDTS------FIQIYSRTPNPGPEFIEKYKSYAAGFGYDPS 252
           L   V+ TDY NYA++      S         +YSR+  PG    EK+ ++A   G+   
Sbjct: 114 LEVSVVETDYKNYALLHTESGPSPGPAFRMATLYSRSQAPGAAVREKFTAFAKARGFTED 173

Query: 251 KIKDTPQD 228
            I   P++
Sbjct: 174 GIVFLPRN 181

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>PTGDS_BOVIN (O02853) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)|
           (Lipocalin-type prostaglandin-D synthase)
           (Glutathione-independent PGD synthetase)
           (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2)
           (PGDS)
          Length = 191

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
 Frame = -3

Query: 401 VLATDYDNYAVV------SGAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 240
           V  TDY+ YA++         +D     +YSR+ NP  E  E + ++A   G+    I  
Sbjct: 120 VAETDYETYALLYTEGVRGPGQDFRMATLYSRSQNPRAEVKEHFTTFAKSLGFTEEGIVF 179

Query: 239 TPQ 231
            P+
Sbjct: 180 LPK 182

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>LAZA_SCHAM (P49291) Lazarillo protein precursor|
          Length = 214

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 7/85 (8%)
 Frame = -3

Query: 455 KCFLRFPTLPFIPKLPYDVLATDYDNYAVV-------SGAKDTSFIQIYSRTPNPGPEFI 297
           K  + FP  P +    Y +L+TDYDNY++V         A  T    I  R+ N     +
Sbjct: 107 KLSVHFPNSPSVGN--YWILSTDYDNYSIVWSCVKRPDSAASTEISWILLRSRNSSNMTL 164

Query: 296 EKYKSYAAGFGYDPSKIKDTPQDCE 222
           E+ +        D +K   T Q  +
Sbjct: 165 ERVEDELKNLQLDLNKYTKTEQSAK 189

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>ISW1_YEAST (P38144) Chromatin remodelling complex ATPase chain ISW1 (EC 3.6.1.-)|
          Length = 1129

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
 Frame = -3

Query: 389  DYDNYAVVSGAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKDTPQDCEVSSD 210
            ++  +  VSG    + IQ  +R   PG + +E+ ++YA  F  +  +I+D  +  ++  +
Sbjct: 891  EFRKFITVSGKYGRNSIQAIARELAPG-KTLEEVRAYAKAFWSNIERIEDYEKYLKIIEN 949

Query: 209  QLAQMMSMPGMDEAL-------TNQFPDLKLK 135
            +  ++  +    EAL        N F DLKLK
Sbjct: 950  EEEKIKRVKMQQEALRRKLSEYKNPFFDLKLK 981

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>CRC1_HOMGA (P80029) Crustacyanin-C1 subunit|
          Length = 181

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
 Frame = -3

Query: 410 PYDVLATDYDNYAVVSGAKD------TSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSK 249
           P  +L TDY NYA +    D      + F  I+SR+ N   ++++K ++       D ++
Sbjct: 104 PLVILETDYSNYACLYSCIDYNFGYHSDFSFIFSRSANLADQYVKKCEAAFKNINVDTTR 163

Query: 248 IKDTPQ 231
              T Q
Sbjct: 164 FVKTVQ 169

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>CRA1_HOMGA (P58989) Crustacyanin-A1 subunit|
          Length = 181

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
 Frame = -3

Query: 410 PYDVLATDYDNYAVVSGAKD------TSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSK 249
           P  +L TDY NYA +    D      + F  I+SR+ N   ++++K ++       D ++
Sbjct: 104 PLVILETDYSNYACLYSCIDYNFGYHSDFSFIFSRSANLADQYVKKCEAAFKNINVDTTR 163

Query: 248 IKDTPQ 231
              T Q
Sbjct: 164 FVKTVQ 169

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>PURP_CHICK (P08938) Purpurin precursor|
          Length = 196

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 8/47 (17%)
 Frame = -3

Query: 407 YDVLATDYDNYAVV--------SGAKDTSFIQIYSRTPNPGPEFIEK 291
           Y V+ TDYDNYA+          G+ D  +  I+SR P   P  I++
Sbjct: 126 YWVIDTDYDNYAITYACRSLKEDGSCDDGYSLIFSRNPRGLPPAIQR 172

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>VL2_HPV55 (Q80939) Minor capsid protein L2|
          Length = 460

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 2/109 (1%)
 Frame = -3

Query: 410 PYDVLATDYDNYAVVSGAKDTSFIQIYSRTPNPGPEFIEK--YKSYAAGFGYDPSKIKDT 237
           P    A + + + +V+ A DTS   IY+    P P+F E+    S++    +  S +  T
Sbjct: 326 PISAAAEEIELHPLVATAHDTSLFDIYA---EPDPDFTEEPVPLSFSTSTPFQRSSVSAT 382

Query: 236 PQDCEVSSDQLAQMMSMPGMDEALTNQFPDLKLKSSVAFDPFTSVTQTL 90
           P             +S+PG  +      PD+   ++    P++ VT  L
Sbjct: 383 PW------GNTTVPLSLPG--DMFVQPGPDIIFPTASTTTPYSPVTPAL 423

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>MFRP_MOUSE (Q8K480) Membrane frizzled-related protein (Membrane-type|
           frizzled-related protein)
          Length = 584

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 16/86 (18%)
 Frame = +1

Query: 52  VCVYLKYTSASFFRVWVTLVNGSNATDDLS----------------FRSGNWFVRASSIP 183
           +C+ L Y + +F  +WV L   +  TD L                 F  G    R +S+ 
Sbjct: 478 MCLGLSYNTTAFPNIWVGLATQTEVTDILRGYKSLTSLPCYQTFQRFLCGLLVPRCTSLG 537

Query: 184 GIDIICASWSEDTSQSCGVSLILLGS 261
            I   C S  +   Q C  SL LLG+
Sbjct: 538 TILPPCRSVCQAAEQQCQSSLALLGT 563

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>NGAL_MOUSE (P11672) Neutrophil gelatinase-associated lipocalin precursor|
           (NGAL) (p25) (SV-40-induced 24P3 protein) (Lipocalin-2)
          Length = 200

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 6/73 (8%)
 Frame = -3

Query: 428 PFIPKLPYDVLATDYDNYAVV-----SGAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFG 264
           P +      V  TDY+ +A+V     S  K    I +Y RT    PE  E++  +A   G
Sbjct: 123 PQVQSYNVQVATTDYNQFAMVFFRKTSENKQYFKITLYGRTKELSPELKERFTRFAKSLG 182

Query: 263 Y-DPSKIKDTPQD 228
             D + I   P D
Sbjct: 183 LKDDNIIFSVPTD 195

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>COMD5_RAT (Q9ERR2) COMM domain-containing protein 5 (Hypertension-related|
           calcium-regulated gene protein) (HCaRG)
          Length = 224

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
 Frame = +3

Query: 426 RECRESQKALAADHLLL---LEISLGTSHVLLRQALHLPP 536
           ++CRE+ + L A   L    L + L  +H LL+QAL LPP
Sbjct: 62  KDCREAVEQLGASANLSEERLAVLLAGTHTLLQQALRLPP 101

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>YFCB_SALTY (P0A293) Hypothetical adenine-specific methylase yfcB (EC 2.1.1.72)|
          Length = 310

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 19/81 (23%), Positives = 37/81 (45%)
 Frame = -3

Query: 629 QGVYTFDEKAGAIKVETFCVHGSPDGYITGIRGKVQCLSQEDMASAETDLEKEEMISSKC 450
           Q  Y  D   G+  +   C +  PD  +  +      +S + +A AE ++E+  +I    
Sbjct: 132 QPKYILDMCTGSGCIAIACAYAFPDAEVDAVD-----ISPDALAVAEHNIEEHGLIHHVT 186

Query: 449 FLRFPTLPFIPKLPYDVLATD 387
            +R      +PK+ YD++ T+
Sbjct: 187 PIRSDLFRDLPKVQYDLIVTN 207

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>YFCB_SALTI (P0A294) Hypothetical adenine-specific methylase yfcB (EC 2.1.1.72)|
          Length = 310

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 19/81 (23%), Positives = 37/81 (45%)
 Frame = -3

Query: 629 QGVYTFDEKAGAIKVETFCVHGSPDGYITGIRGKVQCLSQEDMASAETDLEKEEMISSKC 450
           Q  Y  D   G+  +   C +  PD  +  +      +S + +A AE ++E+  +I    
Sbjct: 132 QPKYILDMCTGSGCIAIACAYAFPDAEVDAVD-----ISPDALAVAEHNIEEHGLIHHVT 186

Query: 449 FLRFPTLPFIPKLPYDVLATD 387
            +R      +PK+ YD++ T+
Sbjct: 187 PIRSDLFRDLPKVQYDLIVTN 207

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>YAN4_SCHPO (Q10070) Hypothetical protein C3H1.04c in chromosome I|
          Length = 601

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
 Frame = -3

Query: 530 KVQCLSQEDMASAETDLEKEEMISSKCFLRFPTLPFIPKLPYDVLATDYDNYAVVSGA-- 357
           K   +S    AS +  L K+ ++ S  F  FPTLP        + A +  N  ++S    
Sbjct: 18  KPYLISYHVRASTQNALLKQTVLQSSSFKSFPTLP-------RLAARNISNSGILSRTTP 70

Query: 356 ---KDTSFIQIYSRTPNPGPEFIEKYKS 282
              K  S ++ YS      PE + K +S
Sbjct: 71  VIIKQISMVRSYSSGDVENPEILNKNES 98

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>FOS_AVINK (P23050) p55-v-Fos transforming protein|
          Length = 322

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 20/61 (32%), Positives = 28/61 (45%)
 Frame = -2

Query: 258 PEQDQGHAAGLRGVLGPASADDVYARDGRGPDKPVPGPEAQVVGRVRPVHERDPDPEEAR 79
           P Q++GH  G+     PA+    Y+R         PG   Q +GR   V +  P+ EE R
Sbjct: 42  PSQNRGHPYGVPAPAPPAA----YSRPAV---LKAPGGRGQSIGRRGKVEQLSPEEEEKR 94

Query: 78  R 76
           R
Sbjct: 95  R 95

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>MYT1_HUMAN (Q01538) Myelin transcription factor 1 (MyT1) (MyTI) (Proteolipid|
           protein-binding protein) (PLPB1)
          Length = 1121

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -2

Query: 174 RGPDKPVPGPEAQVVGRVRPVHERDPDPEEARRSV 70
           RGP+ P P PE  V+  VR   ++D D    + +V
Sbjct: 329 RGPESPSPKPEYSVIVEVRSDDDKDEDTHSRKSTV 363

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>COMD5_MOUSE (Q8R395) COMM domain-containing protein 5|
          Length = 224

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
 Frame = +3

Query: 426 RECRESQKALAADHLLL---LEISLGTSHVLLRQALHLPP 536
           ++CRE+ + L A   L    L + L  +H LL+QAL LPP
Sbjct: 62  KDCREAVQHLGASANLSEERLAVLLAGTHTLLQQALRLPP 101

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>FOS_PIG (O97930) Proto-oncogene protein c-fos (Cellular oncogene fos)|
          Length = 380

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = -2

Query: 210 PASADDVYARDGRGPDKPVPGPEAQVVGRVRPVHERDPDPEEARR 76
           P  +   Y+R   G  K +PG  AQ +GR   V +  P+ EE RR
Sbjct: 99  PTPSAGAYSR--AGAVKTMPGGRAQSIGRRGKVEQLSPEEEEKRR 141

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>EXFAB_CHICK (P21760) Extracellular fatty acid-binding protein precursor|
           (Ex-FABP) (Quiescence-specific protein) (p20K) (Ch21
           protein)
          Length = 178

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
 Frame = -3

Query: 404 DVLATDYDNYAV-----VSGAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 240
           +VL TDY +YAV     V   +    +++YSR+    P  +  ++  A    Y    +  
Sbjct: 107 EVLDTDYKSYAVIFATRVKDGRTLHMMRLYSRSREVSPTAMAIFRKLARERNYTDEMVAV 166

Query: 239 TPQDCEVSSDQL 204
            P   E S D++
Sbjct: 167 LPSQEECSVDEV 178

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>FOS_CHICK (P11939) Proto-oncogene protein c-fos (Cellular oncogene fos)|
          Length = 367

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 20/61 (32%), Positives = 28/61 (45%)
 Frame = -2

Query: 258 PEQDQGHAAGLRGVLGPASADDVYARDGRGPDKPVPGPEAQVVGRVRPVHERDPDPEEAR 79
           P Q++GH  G+     PA+    Y+R         PG   Q +GR   V +  P+ EE R
Sbjct: 87  PSQNRGHPYGVPAPAPPAA----YSRPAV---LKAPGGRGQSIGRRGKVEQLSPEEEEKR 139

Query: 78  R 76
           R
Sbjct: 140 R 140

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>YFCB_ECOLI (P39199) Hypothetical adenine-specific methylase yfcB (EC 2.1.1.72)|
          Length = 310

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 18/81 (22%), Positives = 38/81 (46%)
 Frame = -3

Query: 629 QGVYTFDEKAGAIKVETFCVHGSPDGYITGIRGKVQCLSQEDMASAETDLEKEEMISSKC 450
           Q  +  D   G+  +   C +  PD  +  +      +S + +A AE ++E+  +I +  
Sbjct: 132 QPQHILDMCTGSGCIAIACAYAFPDAEVDAVD-----ISPDALAVAEQNIEEHGLIHNVI 186

Query: 449 FLRFPTLPFIPKLPYDVLATD 387
            +R      +PK+ YD++ T+
Sbjct: 187 PIRSDLFRDLPKVQYDLIVTN 207

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>MUP3_MOUSE (P04939) Major urinary protein 3 precursor (MUP 3) (Non-group|
           1/group 2 MUP15)
          Length = 184

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
 Frame = -3

Query: 407 YDVLATDYDNYAVV-----SGAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIK 243
           + +L TDYDNY ++        K    +++Y R P+   +  EK+       G     I 
Sbjct: 112 FSILKTDYDNYIMIHLINKKDGKTFQLMELYGREPDLSLDIKEKFAKLCEEHGIIRENII 171

Query: 242 D 240
           D
Sbjct: 172 D 172

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>RUSC2_HUMAN (Q8N2Y8) RUN and SH3 domain-containing protein 2|
          Length = 1516

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 18/44 (40%), Positives = 21/44 (47%)
 Frame = -2

Query: 294  EVQVICCRLRLRPEQDQGHAAGLRGVLGPASADDVYARDGRGPD 163
            EVQ +C  L   P Q   H   +  VLG A  D  + R  RGPD
Sbjct: 1451 EVQALCHHLATGPGQLSFHKGDILRVLGRAGGD--WLRCSRGPD 1492


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,776,738
Number of Sequences: 219361
Number of extensions: 1972536
Number of successful extensions: 6316
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 5930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6287
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6257125380
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result