| Clone Name | rbaal33f13 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 236 bits (119), Expect = 7e-59 Identities = 273/332 (82%) Strand = Plus / Minus Query: 294 tttaaataatttagaactttgaaaaacttttgcaatttataaaactggaaattttgaaat 353 |||||||||||| |||||||||| ||||| ||||||||||||| ||||||||||| Sbjct: 69726 tttaaataatttcgaactttgaattttttttgaaatttataaaacttagaattttgaaat 69667 Query: 354 aaaatttcgaagaaagtataaaatgtttgtgaattcaaaaaatgctcaggacttttataa 413 | || || ||||||| ||||||||||| ||||||||||||||||| ||| |||| ||| Sbjct: 69666 agaagtttgaagaaaacataaaatgtttatgaattcaaaaaatgcttgggatttttgtaa 69607 Query: 414 aaatattcgcatattcagaannnnnnncataattttgagaacaatgttagtgaaaacaat 473 |||||||| ||||| | ||| |||||||||||||||||| |||||||||||||| Sbjct: 69606 aaatattcacatatgcggaaaaatgttcataattttgagaacaatcttagtgaaaacaat 69547 Query: 474 aaaagttcaggattttgnnnnnnnnttgcgtgttattttttgagtgcaattnnnnnnnnt 533 |||| | || ||||||| || || ||||||||||||||||||| | Sbjct: 69546 aaaattccatgattttgaaaaacaaatgtgtattattttttgagtgcaattgaaaaaaat 69487 Query: 534 gtttgctaattcaaaaaatgttcatgcatttcaagaaatgtcctaaaattttaaaggtat 593 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| || Sbjct: 69486 gtttgctaattcaaaaaatgttcatacatttcaagaaatgtcctaaaattgtaaagacat 69427 Query: 594 aatataatcagcaccattgaagattataattg 625 ||||| ||||||| ||||| |||||||||||| Sbjct: 69426 aatatgatcagcatcattggagattataattg 69395 Score = 119 bits (60), Expect = 1e-23 Identities = 82/88 (93%), Gaps = 1/88 (1%) Strand = Plus / Minus Query: 3 tgtttttctacgttaaataatttagaacttca-acaacttttctcaattttaagcaactg 61 ||||||||||| |||||||||||||||||||| | | |||||||||||||||| ||||| Sbjct: 70004 tgtttttctactttaaataatttagaacttcagatattttttctcaattttaagaaactg 69945 Query: 62 agaatttcgaaataaaatattcaaaaaa 89 |||||||||||||||||||||||||||| Sbjct: 69944 agaatttcgaaataaaatattcaaaaaa 69917
>gb|AY187021.1| Hordeum vulgare subsp. vulgare phosphate transporter HvPT5 gene, complete cds Length = 3187 Score = 188 bits (95), Expect = 2e-44 Identities = 149/168 (88%), Gaps = 1/168 (0%) Strand = Plus / Plus Query: 294 tttaaataatttagaactttgaaaaacttttgcaatttataaaactggaaattttgaaat 353 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 753 tttaaataatttagaactttgaaaaacttttgcaatttataaaacttagaattt-gaaat 811 Query: 354 aaaatttcgaagaaagtataaaatgtttgtgaattcaaaaaatgctcaggacttttataa 413 ||||||| ||||||| ||||||||||||||| || ||||||||||| ||| |||| ||| Sbjct: 812 aaaattttgaagaaaacataaaatgtttgtgagtttaaaaaatgctcgggatttttgtaa 871 Query: 414 aaatattcgcatattcagaannnnnnncataattttgagaacaatgtt 461 |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 872 aaatattcgcatattcagaaaaatgttcataattttgagaacaatgtt 919 Score = 135 bits (68), Expect = 2e-28 Identities = 92/100 (92%) Strand = Plus / Plus Query: 533 tgtttgctaattcaaaaaatgttcatgcatttcaagaaatgtcctaaaattttaaaggta 592 ||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||| | Sbjct: 991 tgtttgctaattcaaaaaatgttcatgcatttcaagaaaggtcttaaaatttaaaagaca 1050 Query: 593 taatataatcagcaccattgaagattataattgtttttct 632 |||||| |||||||| |||| ||||||||||||||||||| Sbjct: 1051 taatatgatcagcacgattggagattataattgtttttct 1090 Score = 103 bits (52), Expect = 7e-19 Identities = 80/88 (90%), Gaps = 1/88 (1%) Strand = Plus / Plus Query: 3 tgtttttctacgttaaataatttagaacttcaac-aacttttctcaattttaagcaactg 61 ||||||||||| ||||||||||||||||||||| ||||||||| ||||||||| |||| Sbjct: 458 tgtttttctactttaaataatttagaacttcaaataacttttcttaattttaagaaacta 517 Query: 62 agaatttcgaaataaaatattcaaaaaa 89 |||||||||| |||||||||||||||| Sbjct: 518 ggaatttcgaactaaaatattcaaaaaa 545 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 224 tcttaaaaacagttcgtgcctctg 247 |||||||||||||||||||||||| Sbjct: 684 tcttaaaaacagttcgtgcctctg 707
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 60.0 bits (30), Expect = 9e-06 Identities = 46/50 (92%), Gaps = 1/50 (2%) Strand = Plus / Minus Query: 539 ctaattcaaaaaatgttcatgcatttcaagaaatgtcctaaaattttaaa 588 ||||||||||| ||||| |||||||| || |||||||||||||||||||| Sbjct: 317738 ctaattcaaaatatgttaatgcatttaaa-aaatgtcctaaaattttaaa 317690 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ttaaataatttagaacttcaa 35 ||||||||||||||||||||| Sbjct: 317982 ttaaataatttagaacttcaa 317962 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 372 taaaatgtttgtgaattcaaaaaatgctc 400 |||||||||||||| |||||||| ||||| Sbjct: 317906 taaaatgtttgtgacttcaaaaactgctc 317878
>emb|X15694.1|HVBRNZ1H Barley bronze 1 homologue for UDPglucose flavonol 3,0 glucosyl transferase Length = 2326 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 593 taatataatcagcaccattgaagattataattgtttttctcc 634 |||||| ||||||| | ||||||||||||||| ||||||||| Sbjct: 14 taatatgatcagcatccttgaagattataattatttttctcc 55
>gb|AC022535.6| Homo sapiens chromosome 10 clone RP11-34C15, complete sequence Length = 178864 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 70 gaaataaaatattcaaaaaacatat 94 ||||||||||||||||||||||||| Sbjct: 35822 gaaataaaatattcaaaaaacatat 35846
>emb|AL159158.12| Human DNA sequence from clone RP11-81G4 on chromosome 13 Contains the 5' end of a novel gene (KIAA0916) and two CpG islands, complete sequence Length = 154682 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 451 agaacaatgttagtgaaaacaata 474 |||||||||||||||||||||||| Sbjct: 49209 agaacaatgttagtgaaaacaata 49186
>gb|U39647.1| Caenorhabditis elegans cosmid C44E12, complete sequence Length = 17309 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 73 ataaaatattcaaaaaacatata 95 ||||||||||||||||||||||| Sbjct: 5380 ataaaatattcaaaaaacatata 5402
>gb|U97194.4| Caenorhabditis elegans cosmid C37A2, complete sequence Length = 27406 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 332 ataaaactggaaattttgaaata 354 ||||||||||||||||||||||| Sbjct: 9813 ataaaactggaaattttgaaata 9835
>ref|NM_001029294.1| Caenorhabditis elegans TWiK family of potassium channels family member (twk-17) (twk-17) mRNA, complete cds Length = 2218 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 73 ataaaatattcaaaaaacatata 95 ||||||||||||||||||||||| Sbjct: 2141 ataaaatattcaaaaaacatata 2119
>ref|NM_001025857.1| Caenorhabditis elegans CYclin E family member (cye-1) (cye-1) mRNA, complete cds Length = 2045 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 332 ataaaactggaaattttgaaata 354 ||||||||||||||||||||||| Sbjct: 1941 ataaaactggaaattttgaaata 1963
>dbj|AK173779.1| Ciona intestinalis cDNA, clone:citb008a03, full insert sequence Length = 1187 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 33 caacaacttttctcaattttaag 55 ||||||||||||||||||||||| Sbjct: 763 caacaacttttctcaattttaag 785
>dbj|AK114940.1| Ciona intestinalis cDNA, clone:cieg023m02, full insert sequence Length = 1474 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 33 caacaacttttctcaattttaag 55 ||||||||||||||||||||||| Sbjct: 1367 caacaacttttctcaattttaag 1345
>gb|AC093953.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1057_C01, complete sequence Length = 142752 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 339 tggaaattttgaaataaaattt 360 |||||||||||||||||||||| Sbjct: 106935 tggaaattttgaaataaaattt 106956
>gb|AC127588.3| Mus musculus BAC clone RP23-106G21 from chromosome 18, complete sequence Length = 180320 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 334 aaaactggaaattttgaaataa 355 |||||||||||||||||||||| Sbjct: 165625 aaaactggaaattttgaaataa 165604
>emb|Z83110.1|CEF57C2 Caenorhabditis elegans Cosmid F57C2, complete sequence Length = 14275 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 334 aaaactggaaattttgaaataaaatt 359 ||||||||||||||| |||||||||| Sbjct: 12558 aaaactggaaatttttaaataaaatt 12583
>gb|AC122304.4| Mus musculus BAC clone RP23-283G11 from 18, complete sequence Length = 184090 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 334 aaaactggaaattttgaaataa 355 |||||||||||||||||||||| Sbjct: 25539 aaaactggaaattttgaaataa 25518
>emb|AL138812.13| Human DNA sequence from clone RP1-276E15 on chromosome 11p12-14.1 Contains the start of the gene for DIPB protein, ESTs, STSs, GSSs and a CpG island, complete sequence Length = 112356 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 447 tttgagaacaatgttagtgaaa 468 |||||||||||||||||||||| Sbjct: 87589 tttgagaacaatgttagtgaaa 87568
>emb|AJ303345.1|LES303345 Lycopersicon esculentum lateral suppressor gene, ORF1 and ORF2 Length = 57047 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 327 aatttataaaactggaaatttt 348 |||||||||||||||||||||| Sbjct: 36091 aatttataaaactggaaatttt 36112
>gb|AC090467.6| Homo sapiens chromosome 11, clone RP11-634M17, complete sequence Length = 208525 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 tttgagaacaatgttagtgaaa 468 |||||||||||||||||||||| Sbjct: 105790 tttgagaacaatgttagtgaaa 105811
>emb|BX572078.5| Zebrafish DNA sequence from clone DKEY-77G12 in linkage group 14, complete sequence Length = 217034 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 293 gtttaaataatttagaactttgaaaa 318 |||||||||||||||||| ||||||| Sbjct: 39853 gtttaaataatttagaacattgaaaa 39878
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 339 tggaaattttgaaataaaattt 360 |||||||||||||||||||||| Sbjct: 13423472 tggaaattttgaaataaaattt 13423493
>gb|AC087077.1|AC087077 Caenorhabditis briggsae cosmid CB037G05, complete sequence Length = 67367 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 31 ttcaacaacttttctcaatttt 52 |||||||||||||||||||||| Sbjct: 25632 ttcaacaacttttctcaatttt 25653 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 taaaactggaaattttgaaa 352 |||||||||||||||||||| Sbjct: 60945 taaaactggaaattttgaaa 60964
>gb|DQ351213.1| Hordeum vulgare subsp. vulgare resistance protein (ABC1037) gene, complete cds Length = 25080 Score = 44.1 bits (22), Expect = 0.56 Identities = 49/58 (84%) Strand = Plus / Minus Query: 371 ataaaatgtttgtgaattcaaaaaatgctcaggacttttataaaaatattcgcatatt 428 |||||||||||| |||||||||| || || ||| |||| ||||||| || ||||||| Sbjct: 12162 ataaaatgtttgcaaattcaaaaattgttcgggatttttgtaaaaatgtttgcatatt 12105 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 372 taaaatgtttgtgaattcaaaaaatgctc 400 |||||||||||||| |||||||| ||||| Sbjct: 21604 taaaatgtttgtgacttcaaaaactgctc 21576
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 546 aaaaaatgttcatgcatttcaagaaatgt 574 |||||||| ||||||||||||| |||||| Sbjct: 9322 aaaaaatgatcatgcatttcaaaaaatgt 9350
>gb|AC123067.4| Mus musculus BAC clone RP23-20M6 from chromosome 12, complete sequence Length = 200251 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 467 aaacaataaaagttcaggatt 487 ||||||||||||||||||||| Sbjct: 6791 aaacaataaaagttcaggatt 6771
>gb|AC090976.2| Bos taurus clone RP42-400M23, complete sequence Length = 159952 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 71 aaataaaatattcaaaaaaca 91 ||||||||||||||||||||| Sbjct: 45149 aaataaaatattcaaaaaaca 45169
>gb|DP000008.1| Bos taurus target 1 genomic scaffold Length = 2072671 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 71 aaataaaatattcaaaaaaca 91 ||||||||||||||||||||| Sbjct: 268007 aaataaaatattcaaaaaaca 268027
>emb|CR847981.15| Zebrafish DNA sequence from clone CH211-195H23 in linkage group 15, complete sequence Length = 197506 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 ttcgaaataaaatattcaaaa 87 ||||||||||||||||||||| Sbjct: 5134 ttcgaaataaaatattcaaaa 5114
>emb|CR352331.8| Zebrafish DNA sequence from clone DKEY-171H2 in linkage group 17, complete sequence Length = 93120 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 379 tttgtgaattcaaaaaatgct 399 ||||||||||||||||||||| Sbjct: 1778 tttgtgaattcaaaaaatgct 1798
>gb|AC122307.4| Mus musculus BAC clone RP23-287C21 from 12, complete sequence Length = 194202 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 467 aaacaataaaagttcaggatt 487 ||||||||||||||||||||| Sbjct: 174363 aaacaataaaagttcaggatt 174343
>gb|AC113206.10| Mus musculus chromosome 6, clone RP23-320B19, complete sequence Length = 247349 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 617 ttataattgtttttctcctgt 637 ||||||||||||||||||||| Sbjct: 156785 ttataattgtttttctcctgt 156805
>emb|AL357934.29| Human DNA sequence from clone RP11-565P9 on chromosome 9 Contains part of the VAV2 gene for vav 2 oncogene, complete sequence Length = 95505 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 616 attataattgtttttctcctg 636 ||||||||||||||||||||| Sbjct: 41855 attataattgtttttctcctg 41875
>emb|AL359173.15| Human DNA sequence from clone RP11-769K12 on chromosome 6 Contains STSs and GSSs, complete sequence Length = 167904 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 371 ataaaatgtttgtgaattcaaaaaa 395 |||||||||||||||||| |||||| Sbjct: 104948 ataaaatgtttgtgaattaaaaaaa 104924
>emb|AL132661.32|HSDJ345E4 Human DNA sequence from clone RP3-345E4 on chromosome 6q26-27 Contains the 5' end of a gene for a novel protein and 2 CpG islands, complete sequence Length = 108865 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 618 tataattgtttttctcctgtt 638 ||||||||||||||||||||| Sbjct: 13502 tataattgtttttctcctgtt 13522
>emb|CR627496.8| Zebrafish DNA sequence from clone DKEY-223G10 in linkage group 17, complete sequence Length = 154593 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 379 tttgtgaattcaaaaaatgct 399 ||||||||||||||||||||| Sbjct: 223 tttgtgaattcaaaaaatgct 203
>gb|AC092867.7| Homo sapiens 12p BAC RP11-100C20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 195583 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 tctcaattttaagcaactgag 63 ||||||||||||||||||||| Sbjct: 73907 tctcaattttaagcaactgag 73927
>gb|AC023796.22| Homo sapiens 12p BAC RP11-625L16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 173342 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 tctcaattttaagcaactgag 63 ||||||||||||||||||||| Sbjct: 97699 tctcaattttaagcaactgag 97719
>gb|AC105417.1| Homo sapiens chromosome 4 clone RP11-378N18, complete sequence Length = 75994 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 346 tttgaaataaaatttcgaagaaagtataa 374 ||||||||||||||| |||||| |||||| Sbjct: 35258 tttgaaataaaatttagaagaatgtataa 35230
>gb|AC102941.9| Homo sapiens chromosome 15, clone RP11-300A12, complete sequence Length = 174941 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 63 gaatttcgaaataaaatattcaaaa 87 ||||||| ||||||||||||||||| Sbjct: 110603 gaatttcaaaataaaatattcaaaa 110579
>gb|AC020580.11|AC020580 Arabidopsis thaliana chromosome 3 BAC F5E6 genomic sequence, complete sequence Length = 94704 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 332 ataaaactggaaattttgaaa 352 ||||||||||||||||||||| Sbjct: 87081 ataaaactggaaattttgaaa 87101
>gb|AC021443.27| Homo sapiens chromosome 11, clone RP11-692M12, complete sequence Length = 220283 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 577 taaaattttaaaggtataatataat 601 ||||||||||||||||||| ||||| Sbjct: 165939 taaaattttaaaggtataaaataat 165963
>gb|AC156365.3| Bos taurus clone RP42-18L9, complete sequence Length = 153415 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 71 aaataaaatattcaaaaaaca 91 ||||||||||||||||||||| Sbjct: 147517 aaataaaatattcaaaaaaca 147537
>gb|AY659987.1| Macropus eugenii prion protein PrP (PRNP) gene, complete cds Length = 66512 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 299 ataatttagaactttgaaaaacttt 323 |||| |||||||||||||||||||| Sbjct: 48155 ataagttagaactttgaaaaacttt 48179
>gb|AC021360.15| Homo sapiens chromosome 15, clone RP11-25D17, complete sequence Length = 147133 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 63 gaatttcgaaataaaatattcaaaa 87 ||||||| ||||||||||||||||| Sbjct: 101126 gaatttcaaaataaaatattcaaaa 101150
>emb|AL954656.9| Zebrafish DNA sequence from clone CH211-67N10 in linkage group 23, complete sequence Length = 180590 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 71 aaataaaatattcaaaaaacatata 95 ||||| ||||||||||||||||||| Sbjct: 159734 aaatataatattcaaaaaacatata 159710
>gb|AC147927.3| Ovis aries clone CH243-129I22, complete sequence Length = 187152 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 71 aaataaaatattcaaaaaaca 91 ||||||||||||||||||||| Sbjct: 57185 aaataaaatattcaaaaaaca 57205
>gb|AC154480.2| Mus musculus BAC clone RP24-135M1 from 13, complete sequence Length = 171846 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 567 agaaatgtcctaaaattttaa 587 ||||||||||||||||||||| Sbjct: 1097 agaaatgtcctaaaattttaa 1077
>gb|AC155272.3| Mus musculus BAC clone RP23-79N13 from chromosome 13, complete sequence Length = 213306 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 567 agaaatgtcctaaaattttaa 587 ||||||||||||||||||||| Sbjct: 196506 agaaatgtcctaaaattttaa 196486
>emb|CT486004.9| Mouse DNA sequence from clone RP23-424K3 on chromosome 9, complete sequence Length = 212874 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 445 attttgagaacaatgttagtgaaaa 469 |||||||||| |||||||||||||| Sbjct: 194505 attttgagaaaaatgttagtgaaaa 194529
>gb|AC141869.5| Mus musculus BAC clone RP24-424D1 from 8, complete sequence Length = 177664 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 618 tataattgtttttctcctgtt 638 ||||||||||||||||||||| Sbjct: 107708 tataattgtttttctcctgtt 107688
>gb|AC004389.1|AC004389 Homo Sapiens Chromosome X clone bWXD75, complete sequence Length = 89673 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 342 aaattttgaaataaaatttcgaagaaagtataa 374 ||||||||||| ||||||| |||||| |||||| Sbjct: 81462 aaattttgaaaaaaaatttagaagaatgtataa 81430
>gb|AC002322.1|AC002322 Genomic sequence from Human 9q34, complete sequence Length = 39000 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 616 attataattgtttttctcctg 636 ||||||||||||||||||||| Sbjct: 4410 attataattgtttttctcctg 4430
>emb|CT030158.4| M.truncatula DNA sequence from clone MTH2-49E10 on chromosome 3, complete sequence Length = 122591 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 594 aatataatcagcaccattgaa 614 ||||||||||||||||||||| Sbjct: 27364 aatataatcagcaccattgaa 27384 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 594 aatataatcagcaccattgaa 614 ||||||||||||||||||||| Sbjct: 9300 aatataatcagcaccattgaa 9320
>gb|AC173340.1| Mus musculus BAC clone RP24-257F22 from chromosome 9, complete sequence Length = 195116 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 445 attttgagaacaatgttagtgaaaa 469 |||||||||| |||||||||||||| Sbjct: 140023 attttgagaaaaatgttagtgaaaa 139999
>ref|XM_633481.1| Dictyostelium discoideum hypothetical protein (DDB0185961), partial mRNA Length = 1707 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 611 tgaagattataattgttttt 630 |||||||||||||||||||| Sbjct: 819 tgaagattataattgttttt 838
>gb|AC163996.6| Mus musculus chromosome 8, clone RP23-6B9, complete sequence Length = 206641 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 aatttagaactttgaaaaac 320 |||||||||||||||||||| Sbjct: 65572 aatttagaactttgaaaaac 65553
>gb|AC004043.1| Homo sapiens chromosome 5, P1 clone 1355a1, P1 5223 (LBNL H43), complete sequence Length = 76819 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 gaagaaagtataaaatgttt 381 |||||||||||||||||||| Sbjct: 22843 gaagaaagtataaaatgttt 22862
>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete genome Length = 3397754 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 ctttgaaaaacttttgcaat 329 |||||||||||||||||||| Sbjct: 2689175 ctttgaaaaacttttgcaat 2689156
>gb|AC012650.9| Drosophila melanogaster clone BACN24N09, complete sequence Length = 74083 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 465 gaaaacaataaaagttcaggattt 488 ||||||||| |||||||||||||| Sbjct: 23656 gaaaacaatcaaagttcaggattt 23633
>gb|AE002147.1| Ureaplasma parvum serovar 3 str. ATCC 700970 section 48 of 59 of the complete genome Length = 27093 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 tacgttaaataatttagaac 30 |||||||||||||||||||| Sbjct: 15991 tacgttaaataatttagaac 15972
>gb|AC158214.4| Mus musculus chromosome 7, clone RP24-208N15, complete sequence Length = 175320 Score = 40.1 bits (20), Expect = 8.7 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 328 atttataaaactggaaatt-ttgaaata 354 ||||||||||||||||||| |||||||| Sbjct: 159690 atttataaaactggaaattattgaaata 159717
>gb|AY251179.1| Frullania tamarisci tRNA-Leu and tRNA-Phe genes, partial sequence; chloroplast genes for chloroplast products Length = 522 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 aaataaaatattcaaaaaacatat 94 ||||||||||||||||||| |||| Sbjct: 407 aaataaaatattcaaaaaaaatat 430
>emb|Z19155.1|CEF54G8 Caenorhabditis elegans Cosmid F54G8, complete sequence Length = 31613 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 341 gaaattttgaaataaaatttcgaa 364 |||||||||||||||||| ||||| Sbjct: 25327 gaaattttgaaataaaatatcgaa 25304
>gb|AC122337.4| Mus musculus BAC clone RP23-351M10 from chromosome 12, complete sequence Length = 196396 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 tataaaatgtttgtgaattc 389 |||||||||||||||||||| Sbjct: 41101 tataaaatgtttgtgaattc 41120
>gb|AC122905.3| Mus musculus BAC clone RP23-47A1 from 10, complete sequence Length = 152690 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 295 ttaaataatttagaactttgaaaa 318 ||||||||||||||||||| |||| Sbjct: 102629 ttaaataatttagaactttaaaaa 102652
>gb|AC116323.6| Mus musculus BAC clone RP23-281F3 from 8, complete sequence Length = 182204 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 tcaattttaagcaactgaga 64 |||||||||||||||||||| Sbjct: 54573 tcaattttaagcaactgaga 54592
>gb|AC107819.8| Mus musculus chromosome 9, clone RP23-158E1, complete sequence Length = 172309 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 aatgttagtgaaaacaataa 475 |||||||||||||||||||| Sbjct: 14490 aatgttagtgaaaacaataa 14471
>gb|AC126793.13| Medicago truncatula clone mth2-17m16, complete sequence Length = 109787 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 taatttagaactttgaaaaa 319 |||||||||||||||||||| Sbjct: 3777 taatttagaactttgaaaaa 3796
>gb|AC155344.1| Brassica rapa subsp. pekinensis clone KBrH080A08, complete sequence Length = 110038 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 ggaaattttgaaataaaatt 359 |||||||||||||||||||| Sbjct: 46194 ggaaattttgaaataaaatt 46213
>emb|AL645817.1| Human DNA sequence from clone RP1-2A2 on chromosome Xq21, complete sequence Length = 129249 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 tttctacgttaaataattta 26 |||||||||||||||||||| Sbjct: 25240 tttctacgttaaataattta 25221
>emb|AL591344.1| Human DNA sequence from clone RP11-260H5 on chromosome 6 Contains the 3' end of the gene for RU2 (RU2S), complete sequence Length = 63676 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 tttagaactttgaaaaacttttgc 326 ||||||||||| |||||||||||| Sbjct: 7489 tttagaacttttaaaaacttttgc 7466
>emb|AL445435.11| Human DNA sequence from clone RP11-568G11 on chromosome 1 Contains the the 5' end of the RAB3-GAP150 gene for rab3 GTPase-activating protein the non-catalytic subunit, a mortality factor 4 like 1 (MORF4L1) processed pseudogene and the serine/threonine kinase 6 (STK6) known processed pseudogene, complete sequence Length = 189953 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 caacttttctcaattttaag 55 |||||||||||||||||||| Sbjct: 147370 caacttttctcaattttaag 147389
>emb|AL160401.12| Human DNA sequence from clone RP11-442J1 on chromosome 6 Contains the 3' end of the BAI3 gene for brain-specific angiogenesis inhibitor 3, complete sequence Length = 121606 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 301 aatttagaactttgaaaaactttt 324 ||||||||| |||||||||||||| Sbjct: 55774 aatttagaagtttgaaaaactttt 55797
>emb|AL117352.12|HSJ876B10 Human DNA sequence from clone RP5-876B10 on chromosome 1q42.12-43 Contains the 3' end of the GNPAT gene for glyceronephosphate O-acyltransferase, the EXOC8 gene for exocyst complex component 8, the gene for novel protein (DKFZp547N043, FLJ14707, FLJ14411), the 3' end of the EGLN1 gene for egl nine homolog 1 (C. elegans) and a CpG island, complete sequence Length = 138056 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 300 taatttagaactttgaaaaacttttgca 327 ||||||||||| |||| ||||||||||| Sbjct: 72890 taatttagaacattgagaaacttttgca 72917
>emb|AL109754.13|HSDJ839B4 Human DNA sequence from clone RP5-839B4 on chromosome 20 Contains the 3' end of a novel gene, part of a novel gene, the ANKRD5 gene for ankyrin repeat domain 5 and a CpG island, complete sequence Length = 165010 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 ttataaaactggaaattttg 349 |||||||||||||||||||| Sbjct: 94122 ttataaaactggaaattttg 94103
>emb|CR378680.1| Photobacterium profundum SS9 chromosome 2; segment 6/7 Length = 349751 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 cgaaataaaatattcaaaaaacat 92 |||||||||||||| ||||||||| Sbjct: 225985 cgaaataaaatattaaaaaaacat 226008
>emb|AL627129.8| Zebrafish DNA sequence from clone RP71-1F1 in linkage group 24 Contains a novel gene for a protein similar to acyl-CoA thioester hydrolases, a novel gene similar to human SAT (spermidine/spermine N1-acetyltransferase), two novel genes, three novel genes for proteins similar to arylamine N-acetyltransferases, a novel gene similar to human ASP (AKAP-associated sperm protein), the 3' part of the dap1a gene for death associated protein 1a and a CpG island, complete sequence Length = 141894 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 aaattttgaaataaaatttc 361 |||||||||||||||||||| Sbjct: 50717 aaattttgaaataaaatttc 50736
>gb|AC165290.2| Mus musculus BAC clone RP23-343A4 from chromosome 13, complete sequence Length = 206249 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 578 aaaattttaaaggtataata 597 |||||||||||||||||||| Sbjct: 107804 aaaattttaaaggtataata 107823
>gb|AC022450.5| Homo sapiens chromosome 5 clone RP11-96F10, complete sequence Length = 160076 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 564 tcaagaaatgtcctaaaatt 583 |||||||||||||||||||| Sbjct: 90923 tcaagaaatgtcctaaaatt 90904
>gb|AC148335.4| Mus musculus BAC clone RP23-103H10 from chromosome 10, complete sequence Length = 210685 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 295 ttaaataatttagaactttgaaaa 318 ||||||||||||||||||| |||| Sbjct: 60848 ttaaataatttagaactttaaaaa 60871
>emb|AJ515099.1|HBI515099 Hyphaeta birramosa mitochondrial 16S rRNA (partial), tRNA-Leu and nad1 (partial) genes Length = 802 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 taaaatattcaaaaaacata 93 |||||||||||||||||||| Sbjct: 556 taaaatattcaaaaaacata 537
>emb|BX927338.6| Zebrafish DNA sequence from clone CH211-223O15 in linkage group 5, complete sequence Length = 187498 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aaataaaatattcaaaaaac 90 |||||||||||||||||||| Sbjct: 161983 aaataaaatattcaaaaaac 161964
>dbj|AK056756.1| Homo sapiens cDNA FLJ32194 fis, clone PLACE6002419, weakly similar to TRICHOHYALIN Length = 2083 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 aaatgctcaggacttttata 412 |||||||||||||||||||| Sbjct: 1660 aaatgctcaggacttttata 1679
>gb|AC079910.18| Homo sapiens 3 BAC RP11-418B12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167434 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 tgaaaacaataaaagttcag 483 |||||||||||||||||||| Sbjct: 130674 tgaaaacaataaaagttcag 130693
>gb|AC104513.8| Homo sapiens 3q BAC RP11-115O24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 162500 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 464 tgaaaacaataaaagttcag 483 |||||||||||||||||||| Sbjct: 126646 tgaaaacaataaaagttcag 126627
>gb|AC016966.19| Homo sapiens 3 BAC RP11-53D15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 94125 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 aaattttgaaataaaatttcgaag 365 ||||||||||||||||||| |||| Sbjct: 44311 aaattttgaaataaaatttggaag 44334
>gb|AC183493.1| Brassica oleracea Contig B, complete sequence Length = 284024 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 caataaaagttcaggatttt 489 |||||||||||||||||||| Sbjct: 183359 caataaaagttcaggatttt 183378
>gb|AC020734.6| Homo sapiens BAC clone RP11-665I14 from 4, complete sequence Length = 196550 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 aaactggaaattttgaaata 354 |||||||||||||||||||| Sbjct: 58927 aaactggaaattttgaaata 58946
>emb|BX664745.13| Zebrafish DNA sequence from clone DKEY-242A8 in linkage group 23, complete sequence Length = 261934 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 gaaataaaatattcaaaaaa 89 |||||||||||||||||||| Sbjct: 25389 gaaataaaatattcaaaaaa 25408
>emb|AL772391.18| Zebrafish DNA sequence from clone CH211-35J18 in linkage group 23, complete sequence Length = 146397 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 aataaaatattcaaaaaacatata 95 |||||||||||||||| ||||||| Sbjct: 6541 aataaaatattcaaaacacatata 6518
>ref|NG_002588.1| Homo sapiens mortality factor 4 like pseudogene 1 (MORF4LP1) on chromosome 1 Length = 4856 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 caacttttctcaattttaag 55 |||||||||||||||||||| Sbjct: 230 caacttttctcaattttaag 249
>ref|XM_392497.2| PREDICTED: Apis mellifera similar to ENSANGP00000005619 (LOC408968), mRNA Length = 1492 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 aaataaaatttcgaagaaag 369 |||||||||||||||||||| Sbjct: 1309 aaataaaatttcgaagaaag 1328
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 aattttaagcaactgagaat 66 |||||||||||||||||||| Sbjct: 1597577 aattttaagcaactgagaat 1597558
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 taaaatgtttgtgaattcaa 391 |||||||||||||||||||| Sbjct: 23816248 taaaatgtttgtgaattcaa 23816267
>gb|AC154436.2| Mus musculus BAC clone RP24-192B24 from chromosome 14, complete sequence Length = 180476 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 aaattttgaaataaaatttc 361 |||||||||||||||||||| Sbjct: 54984 aaattttgaaataaaatttc 55003
>gb|AC122693.1| Homo sapiens X BAC RP11-379L22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 152457 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 365 gaaagtataaaatgtttgtgaatt 388 |||||||||||||||||| ||||| Sbjct: 85718 gaaagtataaaatgtttgggaatt 85695
>gb|AC131983.11| Mus musculus chromosome 7, clone RP24-173C11, complete sequence Length = 158500 Score = 40.1 bits (20), Expect = 8.7 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 328 atttataaaactggaaatt-ttgaaata 354 ||||||||||||||||||| |||||||| Sbjct: 47946 atttataaaactggaaattattgaaata 47973
>gb|AC009497.3| Homo sapiens BAC clone RP11-502N7 from 2, complete sequence Length = 183105 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 agaaagtataaaatgtttgt 383 |||||||||||||||||||| Sbjct: 79586 agaaagtataaaatgtttgt 79605
>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence Length = 3288558 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 546 aaaaaatgttcatgcatttcaaga 569 |||||||| ||||||||||||||| Sbjct: 1934159 aaaaaatgctcatgcatttcaaga 1934136
>ref|NM_152446.2| Homo sapiens chromosome 14 open reading frame 145 (C14orf145), mRNA Length = 4454 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 aaatgctcaggacttttata 412 |||||||||||||||||||| Sbjct: 3969 aaatgctcaggacttttata 3988
>gb|AC018513.5|AC018513 Homo sapiens chromosome 14 clone RP11-58H3 map 14q31, complete sequence Length = 190773 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 aaatgctcaggacttttata 412 |||||||||||||||||||| Sbjct: 52401 aaatgctcaggacttttata 52382
>dbj|AP005391.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0092C08 Length = 131049 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 taaaatgtttgtgaattcaa 391 |||||||||||||||||||| Sbjct: 105448 taaaatgtttgtgaattcaa 105467
>dbj|AP004213.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1111_H02 Length = 108603 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 taaaatgtttgtgaattcaa 391 |||||||||||||||||||| Sbjct: 7952 taaaatgtttgtgaattcaa 7971
>dbj|AP005746.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0018I03 Length = 145818 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 aattttaagcaactgagaat 66 |||||||||||||||||||| Sbjct: 125821 aattttaagcaactgagaat 125802
>gb|AC102861.12| Mus musculus chromosome 7, clone RP24-532A16, complete sequence Length = 162039 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 ttcatgcatttcaagaaatg 573 |||||||||||||||||||| Sbjct: 92395 ttcatgcatttcaagaaatg 92414
>emb|Z84816.1|HS2A2B Human DNA sequence from PAC 2A2 on chromosome X contains ESTs Length = 96355 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tttctacgttaaataattta 26 |||||||||||||||||||| Sbjct: 71116 tttctacgttaaataattta 71135
>emb|AL132862.1|CEY73F8A Caenorhabditis elegans YAC Y73F8A, complete sequence Length = 322774 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 60 tgagaatttcgaaataaaatattc 83 ||||||||| |||||||||||||| Sbjct: 205896 tgagaatttagaaataaaatattc 205919
>emb|BX000468.5| Zebrafish DNA sequence from clone DKEY-1J5 in linkage group 20, complete sequence Length = 208583 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 533 tgtttgctaattcaaaaaat 552 |||||||||||||||||||| Sbjct: 96773 tgtttgctaattcaaaaaat 96792
>emb|Z68296.1|CEC46C2 Caenorhabditis elegans Cosmid C46C2, complete sequence Length = 41115 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 gaaataaaatattcaaaaaa 89 |||||||||||||||||||| Sbjct: 23156 gaaataaaatattcaaaaaa 23137
>gb|AF100616.1|AF100616 Homo sapiens chromosome 1 MRG1 pseudogene, complete sequence Length = 4856 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 caacttttctcaattttaag 55 |||||||||||||||||||| Sbjct: 230 caacttttctcaattttaag 249
>gb|AE003571.4| Drosophila melanogaster chromosome X, section 68 of 74 of the complete sequence Length = 302538 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 465 gaaaacaataaaagttcaggattt 488 ||||||||| |||||||||||||| Sbjct: 285612 gaaaacaatcaaagttcaggattt 285635
>gb|AC024796.1| Caenorhabditis elegans cosmid Y48G1C, complete sequence Length = 60391 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 gaaattttgaaataaaattt 360 |||||||||||||||||||| Sbjct: 3804 gaaattttgaaataaaattt 3823
>gb|AC161446.3| Mus musculus BAC clone RP24-260B15 from chromosome 13, complete sequence Length = 181988 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 578 aaaattttaaaggtataata 597 |||||||||||||||||||| Sbjct: 785 aaaattttaaaggtataata 804
>emb|CT025528.10| Mouse DNA sequence from clone RP23-205O23 on chromosome 14, complete sequence Length = 224168 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 aaattttgaaataaaatttc 361 |||||||||||||||||||| Sbjct: 198312 aaattttgaaataaaatttc 198331
>emb|AL132853.2|CEY80D3A Caenorhabditis elegans YAC Y80D3A, complete sequence Length = 102495 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 gaatttcgaaataaaatattcaaa 86 |||||||||| ||||||||||||| Sbjct: 99451 gaatttcgaattaaaatattcaaa 99474
>gb|AC001012.1|HSAC001012 Homo sapiens (subclone 1_g6 from P1 H43) DNA sequence, complete sequence Length = 3256 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 gaagaaagtataaaatgttt 381 |||||||||||||||||||| Sbjct: 1093 gaagaaagtataaaatgttt 1074
>gb|J04498.1|HIV2ISY Human immunodeficiency virus type 2, isolate SBLISY, complete genome Length = 9636 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 552 tgttcatgcatttcaagaaa 571 |||||||||||||||||||| Sbjct: 5574 tgttcatgcatttcaagaaa 5593
>emb|AL935198.6| Zebrafish DNA sequence from clone CH211-198E13, complete sequence Length = 200697 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aaataaaatattcaaaaaac 90 |||||||||||||||||||| Sbjct: 179871 aaataaaatattcaaaaaac 179852
>gb|AC133516.3| Mus musculus BAC clone RP23-260G15 from chromosome 10, complete sequence Length = 203750 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 gaaattttgaaataaaattt 360 |||||||||||||||||||| Sbjct: 77616 gaaattttgaaataaaattt 77597
>gb|AC167975.3| Mus musculus BAC clone RP23-171A14 from chromosome 13, complete sequence Length = 220418 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 578 aaaattttaaaggtataata 597 |||||||||||||||||||| Sbjct: 193935 aaaattttaaaggtataata 193954
>gb|AC165235.11| Mus musculus chromosome 8, clone RP23-332G19, complete sequence Length = 220008 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 aatttagaactttgaaaaac 320 |||||||||||||||||||| Sbjct: 218020 aatttagaactttgaaaaac 218001
>gb|AC135851.1| Homo sapiens chromosome 3 clone RP11-152N21, complete sequence Length = 157652 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 362 gaagaaagtataaaatgtttgtga 385 |||||||| ||||||||||||||| Sbjct: 112526 gaagaaaggataaaatgtttgtga 112549 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9,658,047 Number of Sequences: 3902068 Number of extensions: 9658047 Number of successful extensions: 210006 Number of sequences better than 10.0: 122 Number of HSP's better than 10.0 without gapping: 120 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 209283 Number of HSP's gapped (non-prelim): 719 length of query: 638 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 615 effective length of database: 17,143,297,704 effective search space: 10543128087960 effective search space used: 10543128087960 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)