ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal33f08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_468121.1| Oryza sativa (japonica cultivar-group), mRNA 109 1e-20
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
3dbj|AP004849.3| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
4dbj|AK067047.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 1e-20
5gb|AF040570.3| Amycolatopsis mediterranei rifamycin biosynthetic... 42 2.3
6gb|AY376435.1| Paracoccidioides brasiliensis thioredoxin mRNA, c... 42 2.3
7emb|AL096755.1|HS477J10A Human DNA sequence from clone RP3-477J1... 42 2.3
8gb|AC136767.6| Homo sapiens chromosome 11, clone RP13-25N22, com... 42 2.3
9gb|AC103791.17| Homo sapiens chromosome 11, clone CTD-2026O3, co... 42 2.3
10gb|AC091196.6| Homo sapiens chromosome 11, clone RP11-371C18, co... 42 2.3
11dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 42 2.3
12dbj|AP006285.2| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 2.3
13ref|XM_479940.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.3
14ref|XM_450920.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.3
15ref|NM_193195.1| Oryza sativa (japonica cultivar-group), predic... 40 9.3
16ref|XM_472350.1| Oryza sativa (japonica cultivar-group), predic... 40 9.3
17gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 9.3
18gb|AC146937.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.3
19gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 9.3
20gb|AY519500.1| Gallus gallus CNR/Pcdh-alpha gene cluster, comple... 40 9.3
21gb|CP000059.1| Pseudomonas syringae pv. phaseolicola 1448A large... 40 9.3
22gb|AC136965.2| Canis familiaris clone RP81-213K20, complete sequ... 40 9.3
23emb|BX649266.9| Zebrafish DNA sequence from clone DKEY-19J7 in l... 40 9.3
24emb|AL731642.3|OSJN00289 Oryza sativa genomic DNA, chromosome 4,... 40 9.3
25emb|AL606641.3|OSJN00074 Oryza sativa genomic DNA, chromosome 4,... 40 9.3
26gb|AC010007.4| Drosophila melanogaster 3L BAC RP98-17K17 (Roswel... 40 9.3
27ref|NM_057340.2| Drosophila melanogaster Protein tyrosine phosph... 40 9.3
28ref|NM_057339.3| Drosophila melanogaster Protein tyrosine phosph... 40 9.3
29gb|AF462346.1|AF462346 Pantoea agglomerans pv. gypsophilae plasm... 40 9.3
30emb|BX296542.12| Zebrafish DNA sequence from clone CH211-278C10 ... 40 9.3
31ref|NG_004818.1| Gallus gallus cadherin-related neuronal recepto... 40 9.3
32dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
33dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
34dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
35dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
36dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
37dbj|AP003350.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
38dbj|AP003447.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
39dbj|AP005491.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
40dbj|AP005250.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
41dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
42dbj|AP003537.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
43dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
44dbj|AP005907.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
45dbj|AP005577.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
46dbj|AP005904.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
47dbj|AP004553.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
48emb|AJ439731.1|PSA439731 Pseudomonas syringae pv. glycinea avrPp... 40 9.3
49emb|AJ439730.1|PSA439730 Pseudomonas syringae pv. savastanoi avr... 40 9.3
50dbj|AK105282.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.3
51dbj|AK104004.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.3
52dbj|AK101871.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.3
53dbj|AK073871.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.3
54dbj|AK061384.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.3
55emb|AL732352.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 9.3
56gb|AE003471.3| Drosophila melanogaster chromosome 3L, section 5 ... 40 9.3
57gb|AC003038.1|AC003038 Human DNA from chromosome 19-specific cos... 40 9.3
58gb|AC005847.1|AC005847 Drosophila melanogaster DNA sequence (P1s... 40 9.3
59gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 9.3
60gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.3
61gb|AC004447.1|AC004447 Homo sapiens chromosome 19, overlapping c... 40 9.3
62emb|AJ277494.1|PSY277494 Pseudomonas syringae pv. phaseolicola a... 40 9.3
63gb|L11249.1|DROPTP01 D.melanogaster protein tyrosine phosphatase... 40 9.3
64gb|L11253.1|DROPTPB D.melanogaster protein tyrosine phosphatase ... 40 9.3
65gb|L11252.1|DROPTPA D.melanogaster protein tyrosine phosphatase ... 40 9.3
66emb|AL807824.10| Mouse DNA sequence from clone RP23-37J21 on chr... 40 9.3 
>ref|XM_468121.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1404

 Score =  109 bits (55), Expect = 1e-20
 Identities = 124/147 (84%)
 Strand = Plus / Minus

                                                                       
Query: 502 gctcttggaggcttcccagagcccattgctgatgagccacgcttgttaatgccgttacat 561
           ||||||||||||||||||||| ||||||||||||| |||||||| ||||| || ||||||
Sbjct: 993 gctcttggaggcttcccagagtccattgctgatgaaccacgcttattaataccattacat 934

                                                                       
Query: 562 gaggctgcttctgcctctgtagctagcggaggtggtggagatggcggcgaggaaggggag 621
           || |  | ||||||||| |||||||  ||||| |||||||| || | |   |||||||||
Sbjct: 933 gatggcgattctgcctcagtagctactggaggcggtggagacggtgacatcgaaggggag 874

                                      
Query: 622 gtcgagaatgtttgagtctgtctttgg 648
           || ||| ||||| ||||||| ||||||
Sbjct: 873 gttgaggatgttcgagtctggctttgg 847



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                              
Query: 341  gcatctcgtcctcggacgagacatcgtgcttcgacgacagcttctgcttc 390
            ||||||||||||| |||||||| |||||||||||||||| ||||||||||
Sbjct: 1160 gcatctcgtcctcagacgagacgtcgtgcttcgacgacaccttctgcttc 1111
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  109 bits (55), Expect = 1e-20
 Identities = 124/147 (84%)
 Strand = Plus / Plus

                                                                            
Query: 502      gctcttggaggcttcccagagcccattgctgatgagccacgcttgttaatgccgttacat 561
                ||||||||||||||||||||| ||||||||||||| |||||||| ||||| || ||||||
Sbjct: 33190452 gctcttggaggcttcccagagtccattgctgatgaaccacgcttattaataccattacat 33190511

                                                                            
Query: 562      gaggctgcttctgcctctgtagctagcggaggtggtggagatggcggcgaggaaggggag 621
                || |  | ||||||||| |||||||  ||||| |||||||| || | |   |||||||||
Sbjct: 33190512 gatggcgattctgcctcagtagctactggaggcggtggagacggtgacatcgaaggggag 33190571

                                           
Query: 622      gtcgagaatgtttgagtctgtctttgg 648
                || ||| ||||| ||||||| ||||||
Sbjct: 33190572 gttgaggatgttcgagtctggctttgg 33190598



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                                  
Query: 341      gcatctcgtcctcggacgagacatcgtgcttcgacgacagcttctgcttc 390
                ||||||||||||| |||||||| |||||||||||||||| ||||||||||
Sbjct: 33188845 gcatctcgtcctcagacgagacgtcgtgcttcgacgacaccttctgcttc 33188894



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 604      ggcggcgaggaaggggaggt 623
                ||||||||||||||||||||
Sbjct: 27136704 ggcggcgaggaaggggaggt 27136723
to top
>dbj|AP004849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1311_D08
          Length = 163702

 Score =  109 bits (55), Expect = 1e-20
 Identities = 124/147 (84%)
 Strand = Plus / Plus

                                                                         
Query: 502   gctcttggaggcttcccagagcccattgctgatgagccacgcttgttaatgccgttacat 561
             ||||||||||||||||||||| ||||||||||||| |||||||| ||||| || ||||||
Sbjct: 19761 gctcttggaggcttcccagagtccattgctgatgaaccacgcttattaataccattacat 19820

                                                                         
Query: 562   gaggctgcttctgcctctgtagctagcggaggtggtggagatggcggcgaggaaggggag 621
             || |  | ||||||||| |||||||  ||||| |||||||| || | |   |||||||||
Sbjct: 19821 gatggcgattctgcctcagtagctactggaggcggtggagacggtgacatcgaaggggag 19880

                                        
Query: 622   gtcgagaatgtttgagtctgtctttgg 648
             || ||| ||||| ||||||| ||||||
Sbjct: 19881 gttgaggatgttcgagtctggctttgg 19907



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                               
Query: 341   gcatctcgtcctcggacgagacatcgtgcttcgacgacagcttctgcttc 390
             ||||||||||||| |||||||| |||||||||||||||| ||||||||||
Sbjct: 18154 gcatctcgtcctcagacgagacgtcgtgcttcgacgacaccttctgcttc 18203
to top
>dbj|AK067047.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092E02, full
           insert sequence
          Length = 1403

 Score =  109 bits (55), Expect = 1e-20
 Identities = 124/147 (84%)
 Strand = Plus / Minus

                                                                       
Query: 502 gctcttggaggcttcccagagcccattgctgatgagccacgcttgttaatgccgttacat 561
           ||||||||||||||||||||| ||||||||||||| |||||||| ||||| || ||||||
Sbjct: 992 gctcttggaggcttcccagagtccattgctgatgaaccacgcttattaataccattacat 933

                                                                       
Query: 562 gaggctgcttctgcctctgtagctagcggaggtggtggagatggcggcgaggaaggggag 621
           || |  | ||||||||| |||||||  ||||| |||||||| || | |   |||||||||
Sbjct: 932 gatggcgattctgcctcagtagctactggaggcggtggagacggtgacatcgaaggggag 873

                                      
Query: 622 gtcgagaatgtttgagtctgtctttgg 648
           || ||| ||||| ||||||| ||||||
Sbjct: 872 gttgaggatgttcgagtctggctttgg 846



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                              
Query: 341  gcatctcgtcctcggacgagacatcgtgcttcgacgacagcttctgcttc 390
            ||||||||||||| |||||||| |||||||||||||||| ||||||||||
Sbjct: 1159 gcatctcgtcctcagacgagacgtcgtgcttcgacgacaccttctgcttc 1110
to top
>gb|AF040570.3| Amycolatopsis mediterranei rifamycin biosynthetic gene cluster
          Length = 109528

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 592   ggtggtggagatggcggcgaggaag 616
             |||||||| ||||||||||||||||
Sbjct: 11798 ggtggtggcgatggcggcgaggaag 11774
to top
>gb|AY376435.1| Paracoccidioides brasiliensis thioredoxin mRNA, complete cds
          Length = 811

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 589 ggaggtggtggagatggcggcgaggaagg 617
           |||||||||||||||||||| || |||||
Sbjct: 355 ggaggtggtggagatggcggagacgaagg 327
to top
>emb|AL096755.1|HS477J10A Human DNA sequence from clone RP3-477J10 on chromosome 22q13.31-13.33,
             complete sequence
          Length = 96678

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 319   actctgggctgctgcgggctc 339
             |||||||||||||||||||||
Sbjct: 13741 actctgggctgctgcgggctc 13721
to top
>gb|AC136767.6| Homo sapiens chromosome 11, clone RP13-25N22, complete sequence
          Length = 76050

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 589  ggaggtggtggagatggcggc 609
            |||||||||||||||||||||
Sbjct: 4926 ggaggtggtggagatggcggc 4906
to top
>gb|AC103791.17| Homo sapiens chromosome 11, clone CTD-2026O3, complete sequence
          Length = 66781

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 589   ggaggtggtggagatggcggc 609
             |||||||||||||||||||||
Sbjct: 26254 ggaggtggtggagatggcggc 26274
to top
>gb|AC091196.6| Homo sapiens chromosome 11, clone RP11-371C18, complete sequence
          Length = 132211

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 589    ggaggtggtggagatggcggc 609
              |||||||||||||||||||||
Sbjct: 126534 ggaggtggtggagatggcggc 126514
to top
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 215     ccggcgctggcgctctatcgg 235
               |||||||||||||||||||||
Sbjct: 2788646 ccggcgctggcgctctatcgg 2788626
to top
>dbj|AP006285.2| Homo sapiens genomic DNA, chromosome 11 clone:RP13-25N22, complete
             sequence
          Length = 190267

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 589   ggaggtggtggagatggcggc 609
             |||||||||||||||||||||
Sbjct: 13203 ggaggtggtggagatggcggc 13183
to top
>ref|XM_479940.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 264

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 595 ggtggagatggcggcgaggaaggg 618
           |||||||| |||||||||||||||
Sbjct: 67  ggtggagaaggcggcgaggaaggg 44
to top
>ref|XM_450920.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 441

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 595 ggtggagatggcggcgaggaaggg 618
           |||||||| |||||||||||||||
Sbjct: 118 ggtggagaaggcggcgaggaaggg 95
to top
>ref|NM_193195.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 699

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 597 tggagatggcggcgaggaag 616
           ||||||||||||||||||||
Sbjct: 136 tggagatggcggcgaggaag 117
to top
>ref|XM_472350.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 876

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 603 tggcggcgaggaaggggagg 622
           ||||||||||||||||||||
Sbjct: 50  tggcggcgaggaaggggagg 69
to top
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 483    acccgcacccgcttccgcag 502
              ||||||||||||||||||||
Sbjct: 828595 acccgcacccgcttccgcag 828576
to top
>gb|AC146937.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0004O15 map near R3342S, complete sequence
          Length = 140142

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 587   gcggaggtggtggagatggcggcg 610
             |||| |||||||||||||||||||
Sbjct: 71745 gcggcggtggtggagatggcggcg 71768
to top
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 632    tttgagtctgtctttggaac 651
              ||||||||||||||||||||
Sbjct: 946140 tttgagtctgtctttggaac 946159
to top
>gb|AY519500.1| Gallus gallus CNR/Pcdh-alpha gene cluster, complete sequence
          Length = 187517

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 508    ggaggcttcccagagcccat 527
              ||||||||||||||||||||
Sbjct: 123227 ggaggcttcccagagcccat 123246
to top
>gb|CP000059.1| Pseudomonas syringae pv. phaseolicola 1448A large plasmid, complete
            sequence
          Length = 131950

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 632  tttgagtctgtctttggaac 651
            ||||||||||||||||||||
Sbjct: 7065 tttgagtctgtctttggaac 7084
to top
>gb|AC136965.2| Canis familiaris clone RP81-213K20, complete sequence
          Length = 157884

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 638   tctgtctttggaacgggtcatgat 661
             |||||||||||| |||||||||||
Sbjct: 55189 tctgtctttggatcgggtcatgat 55212
to top
>emb|BX649266.9| Zebrafish DNA sequence from clone DKEY-19J7 in linkage group 9, complete
              sequence
          Length = 235135

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 452    tcgtcccaaaacaaaactca 471
              ||||||||||||||||||||
Sbjct: 177337 tcgtcccaaaacaaaactca 177318
to top
>emb|AL731642.3|OSJN00289 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0014D23,
             complete sequence
          Length = 133759

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 603   tggcggcgaggaaggggagg 622
             ||||||||||||||||||||
Sbjct: 33326 tggcggcgaggaaggggagg 33345
to top
>emb|AL606641.3|OSJN00074 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032F06,
             complete sequence
          Length = 148023

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 593   gtggtggagatggcggcgaggaag 616
             ||||||| ||||||||||||||||
Sbjct: 69795 gtggtggcgatggcggcgaggaag 69818
to top
>gb|AC010007.4| Drosophila melanogaster 3L BAC RP98-17K17 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 175481

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 237    tgcagtgcgataccgagtga 256
              ||||||||||||||||||||
Sbjct: 131258 tgcagtgcgataccgagtga 131277
to top
>ref|NM_057340.2| Drosophila melanogaster Protein tyrosine phosphatase 61F CG9181-RB,
           transcript variant B (Ptp61F), mRNA
          Length = 1904

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 237 tgcagtgcgataccgagtga 256
           ||||||||||||||||||||
Sbjct: 39  tgcagtgcgataccgagtga 20
to top
>ref|NM_057339.3| Drosophila melanogaster Protein tyrosine phosphatase 61F CG9181-RA,
           transcript variant A (Ptp61F), mRNA
          Length = 2556

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 237 tgcagtgcgataccgagtga 256
           ||||||||||||||||||||
Sbjct: 39  tgcagtgcgataccgagtga 20
to top
>gb|AF462346.1|AF462346 Pantoea agglomerans pv. gypsophilae plasmid pPATHehg virulence
           factor avrPphD gene, complete cds
          Length = 2701

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 632 tttgagtctgtctttggaac 651
           ||||||||||||||||||||
Sbjct: 114 tttgagtctgtctttggaac 133
to top
>emb|BX296542.12| Zebrafish DNA sequence from clone CH211-278C10 in linkage group 9,
             complete sequence
          Length = 174884

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 452   tcgtcccaaaacaaaactca 471
             ||||||||||||||||||||
Sbjct: 74363 tcgtcccaaaacaaaactca 74344
to top
>ref|NG_004818.1| Gallus gallus cadherin-related neuronal receptor 10 pseudogene (CNRV10)
          Length = 98944

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 508   ggaggcttcccagagcccat 527
             ||||||||||||||||||||
Sbjct: 44768 ggaggcttcccagagcccat 44787
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 593      gtggtggagatggcggcgaggaag 616
                ||||||| ||||||||||||||||
Sbjct: 34863682 gtggtggcgatggcggcgaggaag 34863705



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 603      tggcggcgaggaaggggagg 622
                ||||||||||||||||||||
Sbjct: 19744864 tggcggcgaggaaggggagg 19744883
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 587      gcggaggtggtggagatggcggcg 610
                |||| |||||||||||||||||||
Sbjct: 27650228 gcggcggtggtggagatggcggcg 27650205



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 595      ggtggagatggcggcgaggaaggg 618
                |||||||| |||||||||||||||
Sbjct: 27288037 ggtggagaaggcggcgaggaaggg 27288060



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 595      ggtggagatggcggcgaggaaggg 618
                |||||||| |||||||||||||||
Sbjct: 27287798 ggtggagaaggcggcgaggaaggg 27287821
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 595      ggtggagatggcggcgaggaaggg 618
                |||||||| |||||||||||||||
Sbjct: 13753848 ggtggagaaggcggcgaggaaggg 13753871



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 595     ggtggagatggcggcgaggaaggg 618
               |||||||| |||||||||||||||
Sbjct: 6587069 ggtggagaaggcggcgaggaaggg 6587046



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 595     ggtggagatggcggcgaggaaggg 618
               |||||||| |||||||||||||||
Sbjct: 6586830 ggtggagaaggcggcgaggaaggg 6586807
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 595      ggtggagatggcggcgaggaaggg 618
                |||||||| |||||||||||||||
Sbjct: 15328807 ggtggagaaggcggcgaggaaggg 15328784



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 595     ggtggagatggcggcgaggaaggg 618
               |||||||| |||||||||||||||
Sbjct: 1772807 ggtggagaaggcggcgaggaaggg 1772784
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 597      tggagatggcggcgaggaag 616
                ||||||||||||||||||||
Sbjct: 19197169 tggagatggcggcgaggaag 19197188



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 588      cggaggtggtggagatggcggcga 611
                |||||||||||||| |||||||||
Sbjct: 12953533 cggaggtggtggaggtggcggcga 12953556
to top
>dbj|AP003350.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0702H08
          Length = 166899

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 597    tggagatggcggcgaggaag 616
              ||||||||||||||||||||
Sbjct: 162586 tggagatggcggcgaggaag 162605
to top
>dbj|AP003447.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1619_F12
          Length = 133028

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 597   tggagatggcggcgaggaag 616
             ||||||||||||||||||||
Sbjct: 16790 tggagatggcggcgaggaag 16809
to top
>dbj|AP005491.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0062G05
          Length = 152802

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 595    ggtggagatggcggcgaggaaggg 618
              |||||||| |||||||||||||||
Sbjct: 114438 ggtggagaaggcggcgaggaaggg 114415
to top
>dbj|AP005250.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBb0009H02
          Length = 155388

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 595   ggtggagatggcggcgaggaaggg 618
             |||||||| |||||||||||||||
Sbjct: 55168 ggtggagaaggcggcgaggaaggg 55145
to top
>dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1725_H08
          Length = 155431

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 604   ggcggcgaggaaggggaggt 623
             ||||||||||||||||||||
Sbjct: 33153 ggcggcgaggaaggggaggt 33172
to top
>dbj|AP003537.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1140D12
          Length = 139301

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 588    cggaggtggtggagatggcggcga 611
              |||||||||||||| |||||||||
Sbjct: 104974 cggaggtggtggaggtggcggcga 104997
to top
>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1486_E07
          Length = 110494

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 604    ggcggcgaggaaggggaggt 623
              ||||||||||||||||||||
Sbjct: 108353 ggcggcgaggaaggggaggt 108372
to top
>dbj|AP005907.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1151D08
          Length = 152824

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 595   ggtggagatggcggcgaggaaggg 618
             |||||||| |||||||||||||||
Sbjct: 85739 ggtggagaaggcggcgaggaaggg 85716



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 595   ggtggagatggcggcgaggaaggg 618
             |||||||| |||||||||||||||
Sbjct: 85500 ggtggagaaggcggcgaggaaggg 85477
to top
>dbj|AP005577.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
            clone:OJ1655_B12
          Length = 132736

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 595  ggtggagatggcggcgaggaaggg 618
            |||||||| |||||||||||||||
Sbjct: 3332 ggtggagaaggcggcgaggaaggg 3355
to top
>dbj|AP005904.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1040D06
          Length = 155034

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 595    ggtggagatggcggcgaggaaggg 618
              |||||||| |||||||||||||||
Sbjct: 151962 ggtggagaaggcggcgaggaaggg 151985
to top
>dbj|AP004553.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1790_D02
          Length = 162928

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 595   ggtggagatggcggcgaggaaggg 618
             |||||||| |||||||||||||||
Sbjct: 14383 ggtggagaaggcggcgaggaaggg 14360
to top
>emb|AJ439731.1|PSA439731 Pseudomonas syringae pv. glycinea avrPphDPgy gene
          Length = 2348

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 632 tttgagtctgtctttggaac 651
           ||||||||||||||||||||
Sbjct: 29  tttgagtctgtctttggaac 48
to top
>emb|AJ439730.1|PSA439730 Pseudomonas syringae pv. savastanoi avrPphDPsv gene
          Length = 2450

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 632 tttgagtctgtctttggaac 651
           ||||||||||||||||||||
Sbjct: 143 tttgagtctgtctttggaac 162
to top
>dbj|AK105282.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-D03, full
           insert sequence
          Length = 1578

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 603 tggcggcgaggaaggggagg 622
           ||||||||||||||||||||
Sbjct: 438 tggcggcgaggaaggggagg 457
to top
>dbj|AK104004.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-C04, full
           insert sequence
          Length = 1190

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 593 gtggtggagatggcggcgaggaag 616
           ||||||| ||||||||||||||||
Sbjct: 261 gtggtggcgatggcggcgaggaag 284
to top
>dbj|AK101871.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070F06, full
           insert sequence
          Length = 3349

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 604 ggcggcgaggaaggggaggt 623
           ||||||||||||||||||||
Sbjct: 208 ggcggcgaggaaggggaggt 227
to top
>dbj|AK073871.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075F07, full
           insert sequence
          Length = 2028

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 593 gtggtggagatggcggcgaggaag 616
           ||||||| ||||||||||||||||
Sbjct: 262 gtggtggcgatggcggcgaggaag 285
to top
>dbj|AK061384.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-H09, full
           insert sequence
          Length = 1232

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 593 gtggtggagatggcggcgaggaag 616
           ||||||| ||||||||||||||||
Sbjct: 296 gtggtggcgatggcggcgaggaag 319
to top
>emb|AL732352.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0124B04, complete
             sequence
          Length = 115564

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 593   gtggtggagatggcggcgaggaag 616
             ||||||| ||||||||||||||||
Sbjct: 43321 gtggtggcgatggcggcgaggaag 43344
to top
>gb|AE003471.3| Drosophila melanogaster chromosome 3L, section 5 of 83 of the complete
              sequence
          Length = 302131

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 237    tgcagtgcgataccgagtga 256
              ||||||||||||||||||||
Sbjct: 118000 tgcagtgcgataccgagtga 118019
to top
>gb|AC003038.1|AC003038 Human DNA from chromosome 19-specific cosmid R30923, genomic sequence,
             complete sequence
          Length = 40016

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 563   aggctgcttctgcctctgta 582
             ||||||||||||||||||||
Sbjct: 10332 aggctgcttctgcctctgta 10313
to top
>gb|AC005847.1|AC005847 Drosophila melanogaster DNA sequence (P1s DS03179 (D226), DS06357
             (D230), DS03404 (D231), DS06962 (D232), and DS07291
             (D240)), complete sequence
          Length = 268369

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   tgcagtgcgataccgagtga 256
             ||||||||||||||||||||
Sbjct: 94408 tgcagtgcgataccgagtga 94389
to top
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 478     ccgtaacccgcacccgcttccgca 501
               |||| |||||||||||||||||||
Sbjct: 2229609 ccgtcacccgcacccgcttccgca 2229632
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 587      gcggaggtggtggagatggcggcg 610
                |||| |||||||||||||||||||
Sbjct: 27674216 gcggcggtggtggagatggcggcg 27674193
to top
>gb|AC004447.1|AC004447 Homo sapiens chromosome 19, overlapping cosmids R27918 and R33775,
             complete sequence
          Length = 73007

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 563   aggctgcttctgcctctgta 582
             ||||||||||||||||||||
Sbjct: 67315 aggctgcttctgcctctgta 67296
to top
>emb|AJ277494.1|PSY277494 Pseudomonas syringae pv. phaseolicola avrPphD gene
          Length = 2650

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 632 tttgagtctgtctttggaac 651
           ||||||||||||||||||||
Sbjct: 91  tttgagtctgtctttggaac 110
to top
>gb|L11249.1|DROPTP01 D.melanogaster protein tyrosine phosphatase gene, exon 1
          Length = 314

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 237 tgcagtgcgataccgagtga 256
           ||||||||||||||||||||
Sbjct: 40  tgcagtgcgataccgagtga 21
to top
>gb|L11253.1|DROPTPB D.melanogaster protein tyrosine phosphatase mRNA, complete cds
          Length = 2165

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 237 tgcagtgcgataccgagtga 256
           ||||||||||||||||||||
Sbjct: 40  tgcagtgcgataccgagtga 21
to top
>gb|L11252.1|DROPTPA D.melanogaster protein tyrosine phosphatase mRNA, complete cds
          Length = 1906

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 237 tgcagtgcgataccgagtga 256
           ||||||||||||||||||||
Sbjct: 40  tgcagtgcgataccgagtga 21
to top
>emb|AL807824.10| Mouse DNA sequence from clone RP23-37J21 on chromosome 11, complete
             sequence
          Length = 178597

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 561   tgaggctgcttctgcctctg 580
             ||||||||||||||||||||
Sbjct: 60521 tgaggctgcttctgcctctg 60540


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,066,081
Number of Sequences: 3902068
Number of extensions: 5066081
Number of successful extensions: 91608
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90970
Number of HSP's gapped (non-prelim): 634
length of query: 678
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 655
effective length of database: 17,143,297,704
effective search space: 11228859996120
effective search space used: 11228859996120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top