| Clone Name | rbaal33f04 |
|---|---|
| Clone Library Name | barley_pub |
>MAD14_ORYSA (Q7Y023) MADS-box transcription factor 14 (OsMADS14) (Protein| APETALA1-like B) (Protein AGAMOUS-like 10) (FDRMADS6) (RMADS211) Length = 246 Score = 62.8 bits (151), Expect = 5e-10 Identities = 31/55 (56%), Positives = 36/55 (65%) Frame = -1 Query: 498 TXXXXXSFMMRDAPPVADTSNHPAAAGERAEDVAVQPQVPLRTALPLWMVSHING 334 T SFMMR+A P + SN+PAAAGER EDVA +R LP WM+SHING Sbjct: 192 TSSSSSSFMMREALPTTNISNYPAAAGERIEDVAAGQPQHVRIGLPPWMLSHING 246
>MAD15_ORYSA (Q6Q9I2) MADS-box transcription factor 15 (OsMADS15) (Protein| APETALA1-like A) (FDRMADS3) (RMADS215) Length = 267 Score = 32.0 bits (71), Expect = 0.94 Identities = 21/42 (50%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Frame = -1 Query: 459 PPVADTSNHPAAAGERAEDVAVQPQVPLRTA-LPLWMVSHIN 337 PPV + AAA A VA Q QV LR LP WM+SH+N Sbjct: 228 PPVMMGERNDAAA---AAAVAAQGQVQLRIGGLPPWMLSHLN 266
>MYC_DROME (Q9W4S7) Myc protein (dMyc1) (dMyc) (Diminutive protein)| Length = 717 Score = 30.8 bits (68), Expect = 2.1 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 12/62 (19%) Frame = +2 Query: 35 IHRNNTQEQRVSSKVENSSL-MLHINYMVDYSYSHL-----------SPGGKETEVDEVK 178 I NN ++K++N+S MLH+ ++ D+SY+ +P + E+D V Sbjct: 358 ITTNNNNSNNKNNKLKNNSNGMLHMMHITDHSYTRCNDMVDDGPNLETPSDSDEEIDVVS 417 Query: 179 YT 184 YT Sbjct: 418 YT 419
>FCTA_STRAW (Q82M40) Probable formyl-coenzyme A transferase (EC 2.8.3.16)| (Formyl-CoA transferase) Length = 409 Score = 29.3 bits (64), Expect = 6.1 Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 6/48 (12%) Frame = +3 Query: 267 PGWPVQLVTR-TE*YAYM-----GWKPFSR*CGSPSTVEAPSGVGPEA 392 PGW V+ Y Y+ GWKP S G P + P PEA Sbjct: 245 PGWAVKCAPGGPNDYVYVIVQPVGWKPLSELIGRPELADDPEWATPEA 292
>LOZEN_DROME (Q9W349) Protein lozenge| Length = 826 Score = 29.3 bits (64), Expect = 6.1 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = -1 Query: 456 PVADTSNHPAAAGERAEDVAVQPQVPLRTALPL 358 P A S H AAGE D+A Q + L+ LPL Sbjct: 23 PSASPSGHTGAAGESQLDLASQTESQLQLGLPL 55
>DUFFY_BOVIN (Q9GLX0) Duffy antigen/chemokine receptor (CD234 antigen)| Length = 330 Score = 28.9 bits (63), Expect = 7.9 Identities = 14/43 (32%), Positives = 25/43 (58%) Frame = +2 Query: 83 NSSLMLHINYMVDYSYSHLSPGGKETEVDEVKYTHSCSLLLYS 211 ++ L + ++++D+ + P ET+V+ HSCSLL YS Sbjct: 13 STKLAIKEDFLIDFPEDYY-PDYNETDVEAAAPCHSCSLLNYS 54
>MOT2_HUMAN (O60669) Monocarboxylate transporter 2 (MCT 2)| Length = 478 Score = 24.3 bits (51), Expect(2) = 10.0 Identities = 13/45 (28%), Positives = 22/45 (48%) Frame = +2 Query: 137 LSPGGKETEVDEVKYTHSCSLLLYSDFFSSPLHGVSMFATA*YTR 271 L+P K+ +DE S++ + D F+ P V + A + Y R Sbjct: 268 LAPYAKDQGIDEYSAAFLLSVMAFVDMFARP--SVGLIANSKYIR 310 Score = 22.7 bits (47), Expect(2) = 10.0 Identities = 7/8 (87%), Positives = 8/8 (100%) Frame = +1 Query: 397 CHILCPLA 420 CH+LCPLA Sbjct: 327 CHLLCPLA 334 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,981,621 Number of Sequences: 219361 Number of extensions: 1547730 Number of successful extensions: 3472 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 3385 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3471 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3523384522 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)