ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal32p20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF384103.2| Triticum aestivum zeaxanthin epoxidase (WZE) mRNA... 841 0.0
2ref|XM_462664.1| Oryza sativa (japonica cultivar-group), predic... 190 4e-45
3dbj|AB050884.1| Oryza sativa (japonica cultivar-group) OsABA2 mR... 184 3e-43
4gb|AY104294.1| Zea mays PCO116917 mRNA sequence 168 2e-38
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 74 7e-10
6emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4,... 74 7e-10
7emb|AL139076.2|CJ11168X3 Campylobacter jejuni subsp. jejuni NCTC... 48 0.039
8gb|AY842302.1| Thellungiella halophila zeaxanthin epoxidase (ZEP... 46 0.15
9ref|NM_180954.1| Arabidopsis thaliana ABA1 (ABA DEFICIENT 1); ze... 46 0.15
10ref|NM_126103.2| Arabidopsis thaliana ABA1 (ABA DEFICIENT 1); ze... 46 0.15
11emb|CR388065.20| Zebrafish DNA sequence from clone DKEY-119P2 in... 46 0.15
12gb|AY093145.1| Arabidopsis thaliana zeaxanthin epoxidase precurs... 46 0.15
13gb|AY081304.1| Arabidopsis thaliana zeaxanthin epoxidase precurs... 46 0.15
14gb|AF281655.1|AF281655 Arabidopsis thaliana zeaxanthin epoxidase... 46 0.15
15gb|BT002560.1| Arabidopsis thaliana zeaxanthin epoxidase precurs... 46 0.15
16gb|AF134578.1|AF134578 Arabidopsis thaliana zeaxanthin epoxidase... 46 0.15
17dbj|AB030296.1| Arabidopsis thaliana AtABA1 mRNA, complete cds 46 0.15
18gb|AC154262.1| Mus musculus chromosome 14 clone RP24-304G19, com... 44 0.60
19gb|AF283761.1|AF283761 Arabidopsis thaliana zeaxanthin epoxidase... 44 0.60
20gb|AF134577.1|AF134577 Arabidopsis thaliana zeaxanthin epoxidase... 44 0.60
21dbj|AB026640.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 44 0.60
22emb|CT571274.6| Mouse DNA sequence from clone RP24-142M17 on chr... 44 0.60
23gb|AC103777.14| Homo sapiens chromosome 8, clone RP11-460G23, co... 42 2.4
24gb|AC006991.3|AC006991 Homo sapiens BAC clone RP11-270H4 from Y,... 42 2.4
25gb|AC009947.2|AC009947 Homo sapiens BAC clone RP11-39P20 from Y,... 42 2.4
26ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P... 42 2.4
27gb|AC131687.4| Mus musculus BAC clone RP23-379C1 from 14, comple... 42 2.4
28emb|AL844881.5| Mouse DNA sequence from clone RP23-244B19 on chr... 42 2.4
29gb|CP000025.1| Campylobacter jejuni RM1221, complete genome 40 9.4
30gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Ph... 40 9.4
31gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 9.4
32gb|AF308813.1| Lilium longiflorum COP8-like protein mRNA, partia... 40 9.4
33gb|AC130335.7| Homo sapiens chromosome 8, clone RP13-944D21, com... 40 9.4
34gb|AC146548.11| Medicago truncatula clone mth2-2p3, complete seq... 40 9.4
35gb|AF508278.1| Lilium longiflorum COP8-like protein mRNA, comple... 40 9.4
36gb|CP000302.1| Shewanella denitrificans OS217, complete genome 40 9.4
37emb|AL353730.13| Human DNA sequence from clone RP11-55P9 on chro... 40 9.4
38gb|AC105180.8| Homo sapiens chromosome 8, clone RP11-345J1, comp... 40 9.4
39emb|CR628336.1| Legionella pneumophila str. Paris complete genome 40 9.4
40gb|AC160145.6| Mus musculus 10 BAC RP24-160D12 (Roswell Park Can... 40 9.4
41dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
42gb|AC113191.13| Homo sapiens chromosome 8, clone RP11-598P20, co... 40 9.4
43gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic ... 40 9.4
44dbj|AP002840.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 9.4
45gb|AC133935.3| Mus musculus BAC clone RP24-387M21 from 3, comple... 40 9.4
46emb|AL671478.9| Mouse DNA sequence from clone RP23-110A15 on chr... 40 9.4 
>gb|AF384103.2| Triticum aestivum zeaxanthin epoxidase (WZE) mRNA, partial cds
          Length = 1411

 Score =  841 bits (424), Expect = 0.0
 Identities = 612/668 (91%), Gaps = 11/668 (1%)
 Strand = Plus / Minus

                                                                        
Query: 24   tattacagtggcaacagctaaaa-ttgcctacccctattgtacaccctcagttctttc-c 81
            ||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||  |
Sbjct: 1320 tattacagtggcaacagctaaaaattgcctaccc-tattgtacaccctcggttctttttc 1262

                                                                        
Query: 82   atcgaactgcgacgtagtaactctgtcagaagctattcaaaaccctgttctggcatatct 141
             | ||||||| ||||||||| |||||||||||||| |||||| |||| | ||| ||||||
Sbjct: 1261 gtagaactgcaacgtagtaattctgtcagaagctactcaaaatcctgctttgg-atatct 1203

                                                                        
Query: 142  tgatgagtacaaaaattacaattccttttcttggcggtgatgcagtgtcggctgnnnnnn 201
             ||||||| ||||| ||||||||| |||||||  |  |||||||||||||||||      
Sbjct: 1202 ggatgagtgcaaaagttacaattctttttctttcca-tgatgcagtgtcggctgttt--- 1147

                                                                        
Query: 202  nactgaagaatgct--acagtggctggtgacaaggggtggctgaagtccccactcatgct 259
             |||||||||||||  |||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 1146 -actgaagaatgctgtacagtggctggtgacaaggggtcgttgaagtccccactcatgct 1088

                                                                        
Query: 260  gcctgcagaacttctcccccgcctctcgccgagtcgtatgggagcgcgctgagcaccttc 319
            |||||||||||||||||||| |||||||| |||||||| || |||| ||| |||||||||
Sbjct: 1087 gcctgcagaacttctccccctcctctcgcggagtcgtacggaagcgtgctcagcaccttc 1028

                                                                        
Query: 320  acccggaacatggccttcttgtctgaaccaaactcgatggcatccgaagggtgaaaacga 379
            |||||||||||||||||||||||||| ||||| ||||||||||| |||||||| ||||||
Sbjct: 1027 acccggaacatggccttcttgtctgagccaaattcgatggcatcggaagggtggaaacga 968

                                                                        
Query: 380  accgggaagtttggaggtaaccggtagcgcctaccttcgttgtcattaaaccatgtaccg 439
            || |||||||||||||||||||||||||| || ||||||||||| |||||||||||||||
Sbjct: 967  actgggaagtttggaggtaaccggtagcgtctgccttcgttgtcgttaaaccatgtaccg 908

                                                                        
Query: 440  tgctcgcttccgagatcggtcaaatagaaacccttgttcttgcatgtgatagtagcatgg 499
            ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 907  tgctcgcttcccagatcggtcaaatagaaacccttattcttgcatgtgatagtagcatgg 848

                                                                        
Query: 500  atctctgatacttgtggcaagggcaacgacaacgaagaatcagaattgctcggatctggt 559
            ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 847  atctctgatacttgtggcaaggggaacgacaacgaagaatcagaattgctcggatctggt 788

                                                                        
Query: 560  ttgcttccaatagagagtgtcctctgctcatccctgatcaaacgaatgggctgcaaggcg 619
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| 
Sbjct: 787  ttgcttccaatagagagtgtcctctgttcatccctgatcaaacgaatgggctgcaaggca 728

                                                                        
Query: 620  gagtcatctccagagctcatagggaagangtaccactctccacccatagcttgttccagt 679
            |||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 727  gagtcgcctccagagctcatagggaagaggtaccactctccacccatagcttgttccaat 668

                    
Query: 680  gcatcgtc 687
            ||||||||
Sbjct: 667  gcatcgtc 660
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>ref|XM_462664.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1959

 Score =  190 bits (96), Expect = 4e-45
 Identities = 319/395 (80%), Gaps = 9/395 (2%)
 Strand = Plus / Minus

                                                                        
Query: 296  tatgggagcgcgctgagcaccttcacccggaacatggccttcttgtctgaaccaaactcg 355
            |||||||||| ||| ||||||||||| ||||||| |||||| || |||||||||||||| 
Sbjct: 1916 tatgggagcgtgctcagcaccttcacacggaacacggcctttttatctgaaccaaactca 1857

                                                                        
Query: 356  atggcatccgaagggtgaaaacgaaccgggaagtttggaggtaaccggtagcgcctacct 415
            ||||||||||| || || ||||| || |||||||| |||||||  || ||||| ||||||
Sbjct: 1856 atggcatccgagggatggaaacggacagggaagttcggaggtacgcgatagcgtctacct 1797

                                                                        
Query: 416  tcgttgtcattaaaccatgtaccgtgctcgcttccgagatcggtcaaatagaaacccttg 475
            ||||||||  ||| ||||||||| || || |||||   ||| |||| ||| ||  |||| 
Sbjct: 1796 tcgttgtcggtaatccatgtaccatgttcacttccattatcagtcacataaaaggcctta 1737

                                                                        
Query: 476  ttcttgcatgtgatagtagcatggatctctgatacttgtggcaagggcaacgacaacgaa 535
            |||||||||||||||||||||||| | |||||||  |||||||||||||| | ||  |||
Sbjct: 1736 ttcttgcatgtgatagtagcatggttttctgatatctgtggcaagggcaatgccagggaa 1677

                                                                        
Query: 536  gaatcagaattgctcggatctggtttgcttccaatagagagtgtcctctgctcatccctg 595
            | |   |||||||| |||||||    ||||||||| ||||||| | | |  |||||||||
Sbjct: 1676 gcagtcgaattgctgggatctgaccggcttccaatggagagtgactttttttcatccctg 1617

                                                                        
Query: 596  atcaaacgaatgggctgcaaggcggagtcatctccagagctcatagggaagangtaccac 655
            || || |||||||| ||| ||         |||||||| ||  | |||| || |||||||
Sbjct: 1616 attaatcgaatgggttgcgag---------tctccagaacttgtggggaggaggtaccac 1566

                                               
Query: 656  tctccacccatagcttgttccagtgcatcgtcatc 690
            ||||||||||| |||||||||| ||||||||||||
Sbjct: 1565 tctccacccatggcttgttccaatgcatcgtcatc 1531
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>dbj|AB050884.1| Oryza sativa (japonica cultivar-group) OsABA2 mRNA for zeaxanthin
            epoxidase, complete cds
          Length = 2345

 Score =  184 bits (93), Expect = 3e-43
 Identities = 320/396 (80%), Gaps = 10/396 (2%)
 Strand = Plus / Minus

                                                                        
Query: 296  tatgggagcgcgctgagcaccttcacccggaacatggccttcttgtctgaaccaaactcg 355
            |||||||||| ||| ||||||||||| ||||||| |||||| || |||||||||||||| 
Sbjct: 2109 tatgggagcgtgctcagcaccttcacacggaacacggcctttttatctgaaccaaactca 2050

                                                                        
Query: 356  atggcatccgaagggtgaaaacgaaccgggaagtttggaggta-accggtagcgcctacc 414
            ||||||||||| || || ||||| || |||||||| |||||||  ||| ||||| |||||
Sbjct: 2049 atggcatccgagggatggaaacggacagggaagttcggaggtacgccgatagcgtctacc 1990

                                                                        
Query: 415  ttcgttgtcattaaaccatgtaccgtgctcgcttccgagatcggtcaaatagaaaccctt 474
            |||||||||  ||| ||||||||| || || |||||   ||| |||| ||| ||  ||||
Sbjct: 1989 ttcgttgtcggtaatccatgtaccatgttcacttccattatcagtcacataaaaggcctt 1930

                                                                        
Query: 475  gttcttgcatgtgatagtagcatggatctctgatacttgtggcaagggcaacgacaacga 534
             |||||||||||||||||||||||| | |||||||  |||||||||||||| | ||  ||
Sbjct: 1929 attcttgcatgtgatagtagcatggttttctgatatctgtggcaagggcaatgccaggga 1870

                                                                        
Query: 535  agaatcagaattgctcggatctggtttgcttccaatagagagtgtcctctgctcatccct 594
            || |   |||||||| |||||||    ||||||||| ||||||| | | |  ||||||||
Sbjct: 1869 agcagtcgaattgctgggatctgaccggcttccaatggagagtgactttttttcatccct 1810

                                                                        
Query: 595  gatcaaacgaatgggctgcaaggcggagtcatctccagagctcatagggaagangtacca 654
            ||| || |||||||| ||| ||         |||||||| ||  | |||| || ||||||
Sbjct: 1809 gattaatcgaatgggttgcgag---------tctccagaacttgtggggaggaggtacca 1759

                                                
Query: 655  ctctccacccatagcttgttccagtgcatcgtcatc 690
            |||||||||||| |||||||||| ||||||||||||
Sbjct: 1758 ctctccacccatggcttgttccaatgcatcgtcatc 1723
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>gb|AY104294.1| Zea mays PCO116917 mRNA sequence
          Length = 1342

 Score =  168 bits (85), Expect = 2e-38
 Identities = 196/233 (84%)
 Strand = Plus / Minus

                                                                       
Query: 293 tcgtatgggagcgcgctgagcaccttcacccggaacatggccttcttgtctgaaccaaac 352
           ||||||||||||| | | |||||||||||||||||||| |||||||| || |||||||||
Sbjct: 914 tcgtatgggagcgtgttcagcaccttcacccggaacatagccttcttatcggaaccaaac 855

                                                                       
Query: 353 tcgatggcatccgaagggtgaaaacgaaccgggaagtttggaggtaaccggtagcgccta 412
           || ||| |||| ||||| || |||||||||||||||||||| || |  ||||| || |||
Sbjct: 854 tcaatgacatcggaaggatggaaacgaaccgggaagtttggtggcacgcggtaacgtcta 795

                                                                       
Query: 413 ccttcgttgtcattaaaccatgtaccgtgctcgcttccgagatcggtcaaatagaaaccc 472
           ||||| |||||  ||| ||| ||||| || || || |||||||| |||| ||||||| ||
Sbjct: 794 ccttcattgtcggtaatccaggtaccatgttcactcccgagatcagtcagatagaaagcc 735

                                                                
Query: 473 ttgttcttgcatgtgatagtagcatggatctctgatacttgtggcaagggcaa 525
           || |||||||| ||||||||||||||  | |||||||  ||||| ||||||||
Sbjct: 734 ttattcttgcacgtgatagtagcatgcctttctgatatctgtggaaagggcaa 682



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                           
Query: 643 gaagangtaccactctccacccatagcttgttccagtgcatcgtcatc 690
           ||||| |||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 561 gaagaggtaccattctccacccatagcttgttccagcgcatcgtcatc 514



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                           
Query: 566 ccaatagagagtgtcctctgctcatccctgatcaaacgaatgggctgc 613
           |||| |||||||| ||||||||||||||| || |||||||||||||||
Sbjct: 641 ccaacagagagtgacctctgctcatccctaattaaacgaatgggctgc 594
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 70/81 (86%)
 Strand = Plus / Minus

                                                                            
Query: 341      tctgaaccaaactcgatggcatccgaagggtgaaaacgaaccgggaagtttggaggtaac 400
                |||||||||||||| ||||||||||| || || ||||| || |||||||| |||||||  
Sbjct: 22350882 tctgaaccaaactcaatggcatccgagggatggaaacggacagggaagttcggaggtacg 22350823

                                     
Query: 401      cggtagcgcctaccttcgttg 421
                || ||||| ||||||||||||
Sbjct: 22350822 cgatagcgtctaccttcgttg 22350802



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                     
Query: 654      actctccacccatagcttgttccagtgcatcgtcatc 690
                ||||||||||||| |||||||||| ||||||||||||
Sbjct: 22350073 actctccacccatggcttgttccaatgcatcgtcatc 22350037



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                       
Query: 471      ccttgttcttgcatgtgatagtagcatggatctctgata 509
                |||| |||||||||||||||||||||||| | |||||||
Sbjct: 22350662 ccttattcttgcatgtgatagtagcatggttttctgata 22350624



 Score = 48.1 bits (24), Expect = 0.039
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                        
Query: 296      tatgggagcgcgctgagcaccttcacccggaacatggcct 335
                |||||||||| ||| ||||||||||| ||||||| |||||
Sbjct: 22351048 tatgggagcgtgctcagcaccttcacacggaacacggcct 22351009



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 33       ggcaacagctaaaattgcctacccctattg 62
                ||||||||||||||||||||  ||||||||
Sbjct: 22351331 ggcaacagctaaaattgcctgtccctattg 22351302
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>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22,
              complete sequence
          Length = 147214

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 70/81 (86%)
 Strand = Plus / Minus

                                                                          
Query: 341    tctgaaccaaactcgatggcatccgaagggtgaaaacgaaccgggaagtttggaggtaac 400
              |||||||||||||| ||||||||||| || || ||||| || |||||||| |||||||  
Sbjct: 101786 tctgaaccaaactcaatggcatccgagggatggaaacggacagggaagttcggaggtacg 101727

                                   
Query: 401    cggtagcgcctaccttcgttg 421
              || ||||| ||||||||||||
Sbjct: 101726 cgatagcgtctaccttcgttg 101706



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                   
Query: 654    actctccacccatagcttgttccagtgcatcgtcatc 690
              ||||||||||||| |||||||||| ||||||||||||
Sbjct: 100977 actctccacccatggcttgttccaatgcatcgtcatc 100941



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                     
Query: 471    ccttgttcttgcatgtgatagtagcatggatctctgata 509
              |||| |||||||||||||||||||||||| | |||||||
Sbjct: 101566 ccttattcttgcatgtgatagtagcatggttttctgata 101528



 Score = 48.1 bits (24), Expect = 0.039
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                      
Query: 296    tatgggagcgcgctgagcaccttcacccggaacatggcct 335
              |||||||||| ||| ||||||||||| ||||||| |||||
Sbjct: 101952 tatgggagcgtgctcagcaccttcacacggaacacggcct 101913



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 33     ggcaacagctaaaattgcctacccctattg 62
              ||||||||||||||||||||  ||||||||
Sbjct: 102235 ggcaacagctaaaattgcctgtccctattg 102206
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>emb|AL139076.2|CJ11168X3 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment
              3/6
          Length = 317511

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 138    atcttgatgagtacaaaaattacaattc 165
              |||||||||||||||||||| |||||||
Sbjct: 283687 atcttgatgagtacaaaaataacaattc 283714
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>gb|AY842302.1| Thellungiella halophila zeaxanthin epoxidase (ZEP) mRNA, complete cds
          Length = 2162

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 332  gccttcttgtctgaaccaaactcgatg 358
            |||||||| ||||||||||||||||||
Sbjct: 1982 gccttcttatctgaaccaaactcgatg 1956
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>ref|NM_180954.1| Arabidopsis thaliana ABA1 (ABA DEFICIENT 1); zeaxanthin epoxidase
            AT5G67030 (ABA1) transcript variant AT5G67030.1 mRNA,
            complete cds
          Length = 2373

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 332  gccttcttgtctgaaccaaactcgatg 358
            |||||||| ||||||||||||||||||
Sbjct: 2062 gccttcttatctgaaccaaactcgatg 2036
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>ref|NM_126103.2| Arabidopsis thaliana ABA1 (ABA DEFICIENT 1); zeaxanthin epoxidase
            AT5G67030 (ABA1) transcript variant AT5G67030.2 mRNA,
            complete cds
          Length = 2377

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 332  gccttcttgtctgaaccaaactcgatg 358
            |||||||| ||||||||||||||||||
Sbjct: 2066 gccttcttatctgaaccaaactcgatg 2040
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>emb|CR388065.20| Zebrafish DNA sequence from clone DKEY-119P2 in linkage group 5,
             complete sequence
          Length = 122916

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 573   agagtgtcctctgctcatccctg 595
             |||||||||||||||||||||||
Sbjct: 77003 agagtgtcctctgctcatccctg 76981
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>gb|AY093145.1| Arabidopsis thaliana zeaxanthin epoxidase precursor (At5g67030) mRNA,
            complete cds
          Length = 2297

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 332  gccttcttgtctgaaccaaactcgatg 358
            |||||||| ||||||||||||||||||
Sbjct: 1996 gccttcttatctgaaccaaactcgatg 1970
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>gb|AY081304.1| Arabidopsis thaliana zeaxanthin epoxidase precursor (At5g67030) mRNA,
            complete cds
          Length = 2520

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 332  gccttcttgtctgaaccaaactcgatg 358
            |||||||| ||||||||||||||||||
Sbjct: 2209 gccttcttatctgaaccaaactcgatg 2183
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>gb|AF281655.1|AF281655 Arabidopsis thaliana zeaxanthin epoxidase (ZEP) mRNA, complete cds
          Length = 2314

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 332  gccttcttgtctgaaccaaactcgatg 358
            |||||||| ||||||||||||||||||
Sbjct: 2002 gccttcttatctgaaccaaactcgatg 1976
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>gb|BT002560.1| Arabidopsis thaliana zeaxanthin epoxidase precursor (At5g67030) mRNA,
            complete cds
          Length = 2178

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 332  gccttcttgtctgaaccaaactcgatg 358
            |||||||| ||||||||||||||||||
Sbjct: 2121 gccttcttatctgaaccaaactcgatg 2095
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>gb|AF134578.1|AF134578 Arabidopsis thaliana zeaxanthin epoxidase mRNA, complete cds
          Length = 2323

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 332  gccttcttgtctgaaccaaactcgatg 358
            |||||||| ||||||||||||||||||
Sbjct: 2057 gccttcttatctgaaccaaactcgatg 2031
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>dbj|AB030296.1| Arabidopsis thaliana AtABA1 mRNA, complete cds
          Length = 2345

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 332  gccttcttgtctgaaccaaactcgatg 358
            |||||||| ||||||||||||||||||
Sbjct: 2062 gccttcttatctgaaccaaactcgatg 2036
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>gb|AC154262.1| Mus musculus chromosome 14 clone RP24-304G19, complete sequence
          Length = 162962

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 152    aaaaattacaattccttttctt 173
              ||||||||||||||||||||||
Sbjct: 132787 aaaaattacaattccttttctt 132766
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>gb|AF283761.1|AF283761 Arabidopsis thaliana zeaxanthin epoxidase (ZEP) gene, complete cds
          Length = 3605

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 333  ccttcttgtctgaaccaaactcgatg 358
            ||||||| ||||||||||||||||||
Sbjct: 3238 ccttcttatctgaaccaaactcgatg 3213
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>gb|AF134577.1|AF134577 Arabidopsis thaliana zeaxanthin epoxidase gene, complete cds
          Length = 4807

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 333  ccttcttgtctgaaccaaactcgatg 358
            ||||||| ||||||||||||||||||
Sbjct: 3745 ccttcttatctgaaccaaactcgatg 3720
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>dbj|AB026640.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K8A10
          Length = 31132

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 333   ccttcttgtctgaaccaaactcgatg 358
             ||||||| ||||||||||||||||||
Sbjct: 26568 ccttcttatctgaaccaaactcgatg 26593
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>emb|CT571274.6| Mouse DNA sequence from clone RP24-142M17 on chromosome 14, complete
              sequence
          Length = 178159

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 152    aaaaattacaattccttttctt 173
              ||||||||||||||||||||||
Sbjct: 128657 aaaaattacaattccttttctt 128636
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>gb|AC103777.14| Homo sapiens chromosome 8, clone RP11-460G23, complete sequence
          Length = 164588

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 457    ggtcaaatagaaacccttgtt 477
              |||||||||||||||||||||
Sbjct: 125779 ggtcaaatagaaacccttgtt 125799
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>gb|AC006991.3|AC006991 Homo sapiens BAC clone RP11-270H4 from Y, complete sequence
          Length = 173242

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 572    gagagtgtcctctgctcatcc 592
              |||||||||||||||||||||
Sbjct: 142378 gagagtgtcctctgctcatcc 142398
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>gb|AC009947.2|AC009947 Homo sapiens BAC clone RP11-39P20 from Y, complete sequence
          Length = 149230

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 572   gagagtgtcctctgctcatcc 592
             |||||||||||||||||||||
Sbjct: 22639 gagagtgtcctctgctcatcc 22619
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>ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P3 and inverted repeat IR2
               (P1-P2-P3-IR2@) on chromosome Y
          Length = 4538292

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 572     gagagtgtcctctgctcatcc 592
               |||||||||||||||||||||
Sbjct: 4401156 gagagtgtcctctgctcatcc 4401176



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 572     gagagtgtcctctgctcatcc 592
               |||||||||||||||||||||
Sbjct: 1647684 gagagtgtcctctgctcatcc 1647664
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>gb|AC131687.4| Mus musculus BAC clone RP23-379C1 from 14, complete sequence
          Length = 176044

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 478    cttgcatgtgatagtagcatg 498
              |||||||||||||||||||||
Sbjct: 158657 cttgcatgtgatagtagcatg 158637
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>emb|AL844881.5| Mouse DNA sequence from clone RP23-244B19 on chromosome 2, complete
             sequence
          Length = 219340

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 461   aaatagaaacccttgttcttg 481
             |||||||||||||||||||||
Sbjct: 31326 aaatagaaacccttgttcttg 31346
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>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome
          Length = 1777831

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 138    atcttgatgagtacaaaaattacaattc 165
              ||||||||||||| |||||| |||||||
Sbjct: 984508 atcttgatgagtataaaaataacaattc 984535
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>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete
               genome
          Length = 3397754

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 139     tcttgatgagtacaaaaatt 158
               ||||||||||||||||||||
Sbjct: 1314619 tcttgatgagtacaaaaatt 1314638
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 154      aaattacaattccttttctt 173
                ||||||||||||||||||||
Sbjct: 34148352 aaattacaattccttttctt 34148371
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>gb|AF308813.1| Lilium longiflorum COP8-like protein mRNA, partial cds
          Length = 490

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 667 agcttgttccagtgcatcgtcatc 690
           |||||||||||||||||| |||||
Sbjct: 269 agcttgttccagtgcatcttcatc 246
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>gb|AC130335.7| Homo sapiens chromosome 8, clone RP13-944D21, complete sequence
          Length = 121868

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   actgaagaatgctacagtgg 222
             ||||||||||||||||||||
Sbjct: 29954 actgaagaatgctacagtgg 29935
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>gb|AC146548.11| Medicago truncatula clone mth2-2p3, complete sequence
          Length = 129327

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 52   tacccctattgtacaccctc 71
            ||||||||||||||||||||
Sbjct: 8056 tacccctattgtacaccctc 8075
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>gb|AF508278.1| Lilium longiflorum COP8-like protein mRNA, complete cds
          Length = 1627

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 667 agcttgttccagtgcatcgtcatc 690
           |||||||||||||||||| |||||
Sbjct: 758 agcttgttccagtgcatcttcatc 735
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>gb|CP000302.1| Shewanella denitrificans OS217, complete genome
          Length = 4545906

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 165     ccttttcttggcggtgatgc 184
               ||||||||||||||||||||
Sbjct: 3710763 ccttttcttggcggtgatgc 3710744
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>emb|AL353730.13| Human DNA sequence from clone RP11-55P9 on chromosome 9, complete
             sequence
          Length = 147810

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   ggaacatggccttcttgtct 343
             ||||||||||||||||||||
Sbjct: 17183 ggaacatggccttcttgtct 17164
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>gb|AC105180.8| Homo sapiens chromosome 8, clone RP11-345J1, complete sequence
          Length = 174617

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   actgaagaatgctacagtgg 222
             ||||||||||||||||||||
Sbjct: 46165 actgaagaatgctacagtgg 46184
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>emb|CR628336.1| Legionella pneumophila str. Paris complete genome
          Length = 3503610

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 139     tcttgatgagtacaaaaatt 158
               ||||||||||||||||||||
Sbjct: 1327540 tcttgatgagtacaaaaatt 1327559
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>gb|AC160145.6| Mus musculus 10 BAC RP24-160D12 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 155235

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    tgtacaccctcagttctttc 80
             ||||||||||||||||||||
Sbjct: 96594 tgtacaccctcagttctttc 96613
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 154      aaattacaattccttttctt 173
                ||||||||||||||||||||
Sbjct: 34238824 aaattacaattccttttctt 34238843
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>gb|AC113191.13| Homo sapiens chromosome 8, clone RP11-598P20, complete sequence
          Length = 166669

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 107   tcagaagctattcaaaaccctgtt 130
             ||||||||||||||||| ||||||
Sbjct: 99157 tcagaagctattcaaaagcctgtt 99180
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>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete
              sequence
          Length = 163828

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 154    aaattacaattccttttctt 173
              ||||||||||||||||||||
Sbjct: 112164 aaattacaattccttttctt 112183
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>dbj|AP002840.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-159N11, complete
             sequence
          Length = 177031

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 577   tgtcctctgctcatccctga 596
             ||||||||||||||||||||
Sbjct: 99900 tgtcctctgctcatccctga 99881
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>gb|AC133935.3| Mus musculus BAC clone RP24-387M21 from 3, complete sequence
          Length = 182101

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 215   tacagtggctggtgacaagg 234
             ||||||||||||||||||||
Sbjct: 63651 tacagtggctggtgacaagg 63632
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>emb|AL671478.9| Mouse DNA sequence from clone RP23-110A15 on chromosome X, complete
             sequence
          Length = 208695

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 145   tgagtacaaaaattacaattcctt 168
             |||||||||||||| |||||||||
Sbjct: 69405 tgagtacaaaaattccaattcctt 69382


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,663,816
Number of Sequences: 3902068
Number of extensions: 5663816
Number of successful extensions: 93177
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92898
Number of HSP's gapped (non-prelim): 272
length of query: 690
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 667
effective length of database: 17,143,297,704
effective search space: 11434579568568
effective search space used: 11434579568568
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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