| Clone Name | rbaal33e17 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase activase (RcaB) gene, complete cds; and ribulose 1,5-bisphosphate carboxylase activase (RcaA) gene, alternatively spliced, complete cds Length = 8766 Score = 1296 bits (654), Expect = 0.0 Identities = 676/681 (99%), Gaps = 2/681 (0%) Strand = Plus / Minus Query: 1 gtttgagtggatttcgggtccaaa-tagtcna-catatatatagtgcatgcatgcatctt 58 |||||||||||||||||||||||| ||||| | |||||||||||||||||||| ||||| Sbjct: 4120 gtttgagtggatttcgggtccaaaatagtccaacatatatatagtgcatgcatcgatctt 4061 Query: 59 aagtagagtaggaccttctacttgccgtagaaggcaccggtcttcatggcgtcgtcgttg 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4060 aagtagagtaggaccttctacttgccgtagaaggcaccggtcttcatggcgtcgtcgttg 4001 Query: 119 gcttggccgagcgccgcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttc 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4000 gcttggccgagcgccgcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttc 3941 Query: 179 tcctgctcctggaccagcatgtggccgtactccatgagcttctctatggtcatcttgggc 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3940 tcctgctcctggaccagcatgtggccgtactccatgagcttctctatggtcatcttgggc 3881 Query: 239 tggtcgaacgtgggcggcccctccctggagttgacgaggcgcttggagatgttctccacg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3880 tggtcgaacgtgggcggcccctccctggagttgacgaggcgcttggagatgttctccacg 3821 Query: 299 ccgatctcgccgacccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccg 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3820 ccgatctcgccgacccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccg 3761 Query: 359 aagaagtcgatggactgccccgggaaggtgtccaccagcctcaccacggcctcgtccggg 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3760 aagaagtcgatggactgccccgggaaggtgtccaccagcctcaccacggcctcgtccggg 3701 Query: 419 acgttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3700 acgttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcc 3641 Query: 479 cagtagaacttctccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaagtcg 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3640 cagtagaacttctccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaagtcg 3581 Query: 539 ttgccggtgacgatgatgggcacgcgggggttctcctccttgttgtacatccccgggagc 598 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3580 ttgccggtgacgatgatgggcacgcgggggttctcctccttgttgtacatccccgggagc 3521 Query: 599 tgcacgttggtgggcgcgtccgcgatgttcatcagggtggcgttcaccatctggttgttc 658 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3520 tgcacgttggtgggcgcgtccgcgatgttcatcagggtggcgttcaccatctggttgttc 3461 Query: 659 accgtgtactgcgtcgtcccg 679 ||||||||||||||||||||| Sbjct: 3460 accgtgtactgcgtcgtcccg 3440 Score = 283 bits (143), Expect = 4e-73 Identities = 224/251 (89%) Strand = Plus / Minus Query: 422 ttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccag 481 |||||||| ||||||| |||||||| || ||||| ||||| || |||||||| |||||| Sbjct: 6824 ttgtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccag 6765 Query: 482 tagaacttctccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaagtcgttg 541 |||||||||||||| || || ||||||||||| |||||||| ||||||||||| ||||| Sbjct: 6764 tagaacttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgtta 6705 Query: 542 ccggtgacgatgatgggcacgcgggggttctcctccttgttgtacatccccgggagctgc 601 |||||||||| ||||||||| |||||||||||| |||||||||||| || ||||||||| Sbjct: 6704 ccggtgacgacgatgggcacacgggggttctccctcttgttgtacatgccagggagctgc 6645 Query: 602 acgttggtgggcgcgtccgcgatgttcatcagggtggcgttcaccatctggttgttcacc 661 ||||||||||| || || |||||||||||||||||||||||||||||||||||||| || Sbjct: 6644 acgttggtgggggcatcggcgatgttcatcagggtggcgttcaccatctggttgttgacg 6585 Query: 662 gtgtactgcgt 672 ||||||||||| Sbjct: 6584 gtgtactgcgt 6574 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 158 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 217 ||||||||||||||||| || |||||||||||||| |||||||| |||||||| | ||| Sbjct: 7229 agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 7170 Query: 218 ttctctatggtcatcttgggctggtcgaa 246 ||||| | |||||||| ||||| ||||| Sbjct: 7169 ttctcgactgtcatctttggctgctcgaa 7141 Score = 71.9 bits (36), Expect = 3e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 307 gccgacccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtc 366 ||||||||||||||||||||| |||||||||||||| || ||||| || ||||| ||||| Sbjct: 7080 gccgacccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtc 7021
>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds Length = 1656 Score = 1296 bits (654), Expect = 0.0 Identities = 676/681 (99%), Gaps = 2/681 (0%) Strand = Plus / Minus Query: 1 gtttgagtggatttcgggtccaaa-tagtcna-catatatatagtgcatgcatgcatctt 58 |||||||||||||||||||||||| ||||| | |||||||||||||||||||| ||||| Sbjct: 1551 gtttgagtggatttcgggtccaaaatagtccaacatatatatagtgcatgcatcgatctt 1492 Query: 59 aagtagagtaggaccttctacttgccgtagaaggcaccggtcttcatggcgtcgtcgttg 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1491 aagtagagtaggaccttctacttgccgtagaaggcaccggtcttcatggcgtcgtcgttg 1432 Query: 119 gcttggccgagcgccgcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttc 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1431 gcttggccgagcgccgcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttc 1372 Query: 179 tcctgctcctggaccagcatgtggccgtactccatgagcttctctatggtcatcttgggc 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1371 tcctgctcctggaccagcatgtggccgtactccatgagcttctctatggtcatcttgggc 1312 Query: 239 tggtcgaacgtgggcggcccctccctggagttgacgaggcgcttggagatgttctccacg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1311 tggtcgaacgtgggcggcccctccctggagttgacgaggcgcttggagatgttctccacg 1252 Query: 299 ccgatctcgccgacccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccg 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1251 ccgatctcgccgacccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccg 1192 Query: 359 aagaagtcgatggactgccccgggaaggtgtccaccagcctcaccacggcctcgtccggg 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1191 aagaagtcgatggactgccccgggaaggtgtccaccagcctcaccacggcctcgtccggg 1132 Query: 419 acgttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1131 acgttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcc 1072 Query: 479 cagtagaacttctccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaagtcg 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1071 cagtagaacttctccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaagtcg 1012 Query: 539 ttgccggtgacgatgatgggcacgcgggggttctcctccttgttgtacatccccgggagc 598 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1011 ttgccggtgacgatgatgggcacgcgggggttctcctccttgttgtacatccccgggagc 952 Query: 599 tgcacgttggtgggcgcgtccgcgatgttcatcagggtggcgttcaccatctggttgttc 658 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 951 tgcacgttggtgggcgcgtccgcgatgttcatcagggtggcgttcaccatctggttgttc 892 Query: 659 accgtgtactgcgtcgtcccg 679 ||||||||||||||||||||| Sbjct: 891 accgtgtactgcgtcgtcccg 871
>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB) mRNA, complete cds; nuclear gene for chloroplast product Length = 1525 Score = 1076 bits (543), Expect = 0.0 Identities = 614/637 (96%), Gaps = 3/637 (0%) Strand = Plus / Minus Query: 43 tgcatgcatgcatcttaagtagagtaggaccttctacttgccgtagaaggcaccggtctt 102 |||| |||||||||||||||| |||||| |||||||||||||||||||| |||||| Sbjct: 1354 tgcacgcatgcatcttaagta---taggactttctacttgccgtagaaggcgccggtcgc 1298 Query: 103 catggcgtcgtcgttggcttggccgagcgccgcctcgctgaggtacttgtcggcgagctg 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1297 catggcgtcgtcgttggcttggccgagcgccgcctcgctgaggtacttgtcggcgagctg 1238 Query: 163 cacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagcttctc 222 ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1237 cacgcgcttcacgttctcctgctcctggaccagcatgtggccgtactccatgagcttctc 1178 Query: 223 tatggtcatcttgggctggtcgaacgtgggcggcccctccctggagttgacgaggcgctt 282 |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 1177 gatggtcatcttgggctggtcgaacgtcggcggcccctccctggagttgacgagccgctt 1118 Query: 283 ggagatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtacacccg 342 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1117 ggagatgttctcgacgccgatctcgccgacccacttgcgcacctcgtcgtcgtacacccg 1058 Query: 343 tgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggtgtccaccagcctcac 402 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1057 cgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggtgtccaccagcctcac 998 Query: 403 cacggcctcgtccgggacgttgtcggtgcggaagatgcccttgcacacgccgatgcggtc 462 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 997 cacggcctcgtcggggacgttgtcggtgcggaagatgcccttgcacacgccgatgcggtc 938 Query: 463 ctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacggatcaggggagcgta 522 ||| |||||||||||||||||||||||||||||||| ||||| ||||| ||||| ||||| Sbjct: 937 ctcccgggtgggcgcccagtagaacttctccatgcggccgtcccggatgaggggcgcgta 878 Query: 523 cagcgtcgagaagtcgttgccggtgacgatgatgggcacgcgggggttctcctccttgtt 582 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 877 cagcgtcgagaagtcgttgccggtgacgatgatgggcacgcgtgggttctcctccttgtt 818 Query: 583 gtacatccccgggagctgcacgttggtgggcgcgtccgcgatgttcatcagggtggcgtt 642 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 817 gtacatccccgggaactgcacgttggtgggcgcgtccgcgatgttcatcagggtggcgtt 758 Query: 643 caccatctggttgttcaccgtgtactgcgtcgtcccg 679 ||||||||||||||||||||||||||||||||||||| Sbjct: 757 caccatctggttgttcaccgtgtactgcgtcgtcccg 721
>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase precursor, mRNA, partial cds Length = 1336 Score = 618 bits (312), Expect = e-174 Identities = 507/572 (88%) Strand = Plus / Minus Query: 98 gtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctgaggtacttgtcggcg 157 |||||||||||||| |||||||||| || || || |||||| ||||||||||||| || Sbjct: 908 gtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggtacttgtcagca 849 Query: 158 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 217 |||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||| Sbjct: 848 agctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgtactccaagagc 789 Query: 218 ttctctatggtcatcttgggctggtcgaacgtgggcggcccctccctggagttgacgagg 277 ||||| || || ||||||||||| |||||||||||||| |||||| ||||||||||||| Sbjct: 788 ttctcgatcgttatcttgggctgctcgaacgtgggcgggccctccttggagttgacgagc 729 Query: 278 cgcttggagatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtac 337 | ||| ||||||||| |||||| |||||| |||||| || |||||||||||||| Sbjct: 728 ttcctggcgatgttctcgacgccggtctcgctcacccaccgtcggacctcgtcgtcgtag 669 Query: 338 acccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggtgtccaccagc 397 ||||| || ||||||||||||||||||||||||||||| || ||||||||||| |||||| Sbjct: 668 acccgggcacgcagcgcgccgaagaagtcgatggactggccagggaaggtgtcgaccagc 609 Query: 398 ctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgcacacgccgatg 457 || ||| ||| || |||| |||||||||||||||||||||||| ||||||||| Sbjct: 608 tggacgacgtgctcctcgtcgacgccgtcggtgcggaagatgcccttgcagacgccgatg 549 Query: 458 cggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacggatcagggga 517 ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| || || Sbjct: 548 cggtcctcgcgggtgggcgcccagtagaacttctccatgcggccgtcgcggatgagcggc 489 Query: 518 gcgtacagcgtcgagaagtcgttgccggtgacgatgatgggcacgcgggggttctcctcc 577 ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 488 gcgtagagcgtggagaagtcgttgccggtgacgatgatgggcacgcgggggttgtcctcc 429 Query: 578 ttgttgtacatccccgggagctgcacgttggtgggcgcgtccgcgatgttcatcagggtg 637 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 428 ttgttgtacatccccgggagctgcacgttggtggggttgtcggcgatgttcatcagggtg 369 Query: 638 gcgttcaccatctggttgttcaccgtgtactg 669 ||||| |||||||||||||||||||||||||| Sbjct: 368 gcgttgaccatctggttgttcaccgtgtactg 337
>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase precursor (rca1) mRNA, complete cds Length = 1424 Score = 611 bits (308), Expect = e-171 Identities = 506/572 (88%) Strand = Plus / Minus Query: 98 gtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctgaggtacttgtcggcg 157 |||||||||||||| |||||||||| || || || |||||| ||||||||||||| || Sbjct: 1303 gtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggtacttgtcagca 1244 Query: 158 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 217 |||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||| Sbjct: 1243 agctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgtactccaagagc 1184 Query: 218 ttctctatggtcatcttgggctggtcgaacgtgggcggcccctccctggagttgacgagg 277 ||||| || || ||||||||||| |||||||||||||| |||||| ||||||||||||| Sbjct: 1183 ttctcgatcgttatcttgggctgctcgaacgtgggcgggccctccttggagttgacgagc 1124 Query: 278 cgcttggagatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtac 337 | ||| ||||||||| |||||| |||||| |||||| || |||||||||||||| Sbjct: 1123 ttcctggcgatgttctcgacgccggtctcgctcacccaccgtcggacctcgtcgtcgtag 1064 Query: 338 acccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggtgtccaccagc 397 ||||| || ||||||||||||||||| ||||||||||| || ||||||||||| |||||| Sbjct: 1063 acccgggcacgcagcgcgccgaagaaatcgatggactggccagggaaggtgtcgaccagc 1004 Query: 398 ctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgcacacgccgatg 457 || ||| ||| || |||| |||||||||||||||||||||||| ||||||||| Sbjct: 1003 tggacgacgtgctcctcgtcgacgccgtcggtgcggaagatgcccttgcagacgccgatg 944 Query: 458 cggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacggatcagggga 517 ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| || || Sbjct: 943 cggtcctcgcgggtgggcgcccagtagaacttctccatgcggccgtcgcggatgagcggc 884 Query: 518 gcgtacagcgtcgagaagtcgttgccggtgacgatgatgggcacgcgggggttctcctcc 577 ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 883 gcgtagagcgtggagaagtcgttgccggtgacgatgatgggcacgcgggggttgtcctcc 824 Query: 578 ttgttgtacatccccgggagctgcacgttggtgggcgcgtccgcgatgttcatcagggtg 637 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 823 ttgttgtacatccccgggagctgcacgttggtggggttgtcggcgatgttcatcagggtg 764 Query: 638 gcgttcaccatctggttgttcaccgtgtactg 669 ||||| |||||||||||||||||||||||||| Sbjct: 763 gcgttgaccatctggttgttcaccgtgtactg 732
>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence Length = 1750 Score = 565 bits (285), Expect = e-158 Identities = 499/572 (87%) Strand = Plus / Minus Query: 98 gtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctgaggtacttgtcggcg 157 |||||||||||||| |||||||||| || || || |||||| ||||||||||||| || Sbjct: 1303 gtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggtacttgtcagca 1244 Query: 158 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 217 |||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||| Sbjct: 1243 agctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgtactccaagagc 1184 Query: 218 ttctctatggtcatcttgggctggtcgaacgtgggcggcccctccctggagttgacgagg 277 ||||| || || ||||||||||| |||||||||||||| |||||| ||||||||||||| Sbjct: 1183 ttctcgatcgttatcttgggctgctcgaacgtgggcgggccctccttggagttgacgagc 1124 Query: 278 cgcttggagatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtac 337 | ||| ||||||||| |||||| |||||| |||||| || |||||||||||||| Sbjct: 1123 ttcctggcgatgttctcgacgccggtctcgctcacccaccgtcggacctcgtcgtcgtag 1064 Query: 338 acccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggtgtccaccagc 397 ||| || ||||||||||||||||| ||||||||||| || ||||||||||| |||||| Sbjct: 1063 accgtggcacgcagcgcgccgaagaaatcgatggactggccggggaaggtgtcgaccagc 1004 Query: 398 ctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgcacacgccgatg 457 || ||| ||| || |||| |||||||||||||||||||||||| ||||||||| Sbjct: 1003 tggacgacgtgctcctcgtcgacgccgtcggtgcggaagatgcccttgcagacgccgatg 944 Query: 458 cggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacggatcagggga 517 ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| || || Sbjct: 943 cggtcctcgcgggtgggcgcccagtagaacttctccatgcggccgtcgcggatgagcggc 884 Query: 518 gcgtacagcgtcgagaagtcgttgccggtgacgatgatgggcacgcgggggttctcctcc 577 ||||| ||||| |||||||||||||||||||||||||||||||||| || |||||| Sbjct: 883 gcgtagagcgtggagaagtcgttgccggtgacgatgatgggcacgcnnnnnttgtcctcc 824 Query: 578 ttgttgtacatccccgggagctgcacgttggtgggcgcgtccgcgatgttcatcagggtg 637 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 823 ttgttgtacatccccgggagctgcacgttggtggggttgtcggcgatgttcatcagggtg 764 Query: 638 gcgttcaccatctggttgttcaccgtgtactg 669 ||||| |||||||||||||||||||||||||| Sbjct: 763 gcgttgaccatctggttgttcaccgtgtactg 732
>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate carboxylase activase large isoform precursor protein, complete cds, clone: 13YPR038 Length = 1558 Score = 474 bits (239), Expect = e-130 Identities = 500/587 (85%) Strand = Plus / Minus Query: 83 ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 142 |||||||||| ||| ||||||||||||||| ||| || | || || || |||||||| Sbjct: 1309 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1250 Query: 143 aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 202 | ||||| || || ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 1249 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1190 Query: 203 ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 262 ||||||||||||||||| || || |||||||||||||| |||||| || || |||||| Sbjct: 1189 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1130 Query: 263 ctggagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 322 || ||||| || || | |||| ||||||||||| || | || |||||||||||| Sbjct: 1129 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 1070 Query: 323 acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccggg 382 |||||||||||||| || || || || || ||||||||||| |||||||| || || ||| Sbjct: 1069 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatggattggcctggg 1010 Query: 383 aaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgccc 442 ||| |||| || | | | || | | ||||||| ||||||||||||||||||||||| ||| Sbjct: 1009 aagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtgcggaagataccc 950 Query: 443 ttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccg 502 ||||| ||||||| ||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 949 ttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttctccatacgcccg 890 Query: 503 tcacggatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgatgatgggcacg 562 |||||||| || || ||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 889 tcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatggggaca 830 Query: 563 cgggggttctcctccttgttgtacatccccgggagctgcacgttggtgggcgcgtccgcg 622 |||||||| |||||||||||||||||||| ||||||||||||||||| || ||| ||| Sbjct: 829 cgggggttgtcctccttgttgtacatcccggggagctgcacgttggttgggttgtcggcg 770 Query: 623 atgttcatcagggtggcgttcaccatctggttgttcaccgtgtactg 669 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 769 atgttcatcagggtggcgttcaccatctggttgttcaccgtgtactg 723
>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full insert sequence Length = 1721 Score = 474 bits (239), Expect = e-130 Identities = 500/587 (85%) Strand = Plus / Minus Query: 83 ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 142 |||||||||| ||| ||||||||||||||| ||| || | || || || |||||||| Sbjct: 1357 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1298 Query: 143 aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 202 | ||||| || || ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 1297 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1238 Query: 203 ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 262 ||||||||||||||||| || || |||||||||||||| |||||| || || |||||| Sbjct: 1237 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1178 Query: 263 ctggagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 322 || ||||| || || | |||| ||||||||||| || | || |||||||||||| Sbjct: 1177 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 1118 Query: 323 acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccggg 382 |||||||||||||| || || || || || ||||||||||| |||||||| || || ||| Sbjct: 1117 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatggattggcctggg 1058 Query: 383 aaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgccc 442 ||| |||| || | | | || | | ||||||| ||||||||||||||||||||||| ||| Sbjct: 1057 aagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtgcggaagataccc 998 Query: 443 ttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccg 502 ||||| ||||||| ||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 997 ttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttctccatacgcccg 938 Query: 503 tcacggatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgatgatgggcacg 562 |||||||| || || ||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 937 tcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatggggaca 878 Query: 563 cgggggttctcctccttgttgtacatccccgggagctgcacgttggtgggcgcgtccgcg 622 |||||||| |||||||||||||||||||| ||||||||||||||||| || ||| ||| Sbjct: 877 cgggggttgtcctccttgttgtacatcccggggagctgcacgttggttgggttgtcggcg 818 Query: 623 atgttcatcagggtggcgttcaccatctggttgttcaccgtgtactg 669 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 817 atgttcatcagggtggcgttcaccatctggttgttcaccgtgtactg 771
>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full insert sequence Length = 1682 Score = 474 bits (239), Expect = e-130 Identities = 500/587 (85%) Strand = Plus / Minus Query: 83 ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 142 |||||||||| ||| ||||||||||||||| ||| || | || || || |||||||| Sbjct: 1308 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1249 Query: 143 aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 202 | ||||| || || ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 1248 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1189 Query: 203 ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 262 ||||||||||||||||| || || |||||||||||||| |||||| || || |||||| Sbjct: 1188 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1129 Query: 263 ctggagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 322 || ||||| || || | |||| ||||||||||| || | || |||||||||||| Sbjct: 1128 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 1069 Query: 323 acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccggg 382 |||||||||||||| || || || || || ||||||||||| |||||||| || || ||| Sbjct: 1068 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatggattggcctggg 1009 Query: 383 aaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgccc 442 ||| |||| || | | | || | | ||||||| ||||||||||||||||||||||| ||| Sbjct: 1008 aagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtgcggaagataccc 949 Query: 443 ttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccg 502 ||||| ||||||| ||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 948 ttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttctccatacgcccg 889 Query: 503 tcacggatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgatgatgggcacg 562 |||||||| || || ||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 888 tcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatggggaca 829 Query: 563 cgggggttctcctccttgttgtacatccccgggagctgcacgttggtgggcgcgtccgcg 622 |||||||| |||||||||||||||||||| ||||||||||||||||| || ||| ||| Sbjct: 828 cgggggttgtcctccttgttgtacatcccggggagctgcacgttggttgggttgtcggcg 769 Query: 623 atgttcatcagggtggcgttcaccatctggttgttcaccgtgtactg 669 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 768 atgttcatcagggtggcgttcaccatctggttgttcaccgtgtactg 722
>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full insert sequence Length = 1680 Score = 474 bits (239), Expect = e-130 Identities = 500/587 (85%) Strand = Plus / Minus Query: 83 ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 142 |||||||||| ||| ||||||||||||||| ||| || | || || || |||||||| Sbjct: 1346 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1287 Query: 143 aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 202 | ||||| || || ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 1286 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1227 Query: 203 ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 262 ||||||||||||||||| || || |||||||||||||| |||||| || || |||||| Sbjct: 1226 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1167 Query: 263 ctggagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 322 || ||||| || || | |||| ||||||||||| || | || |||||||||||| Sbjct: 1166 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 1107 Query: 323 acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccggg 382 |||||||||||||| || || || || || ||||||||||| |||||||| || || ||| Sbjct: 1106 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatggattggcctggg 1047 Query: 383 aaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgccc 442 ||| |||| || | | | || | | ||||||| ||||||||||||||||||||||| ||| Sbjct: 1046 aagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtgcggaagataccc 987 Query: 443 ttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccg 502 ||||| ||||||| ||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 986 ttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttctccatacgcccg 927 Query: 503 tcacggatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgatgatgggcacg 562 |||||||| || || ||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 926 tcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatggggaca 867 Query: 563 cgggggttctcctccttgttgtacatccccgggagctgcacgttggtgggcgcgtccgcg 622 |||||||| |||||||||||||||||||| ||||||||||||||||| || ||| ||| Sbjct: 866 cgggggttgtcctccttgttgtacatcccggggagctgcacgttggttgggttgtcggcg 807 Query: 623 atgttcatcagggtggcgttcaccatctggttgttcaccgtgtactg 669 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 806 atgttcatcagggtggcgttcaccatctggttgttcaccgtgtactg 760
>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full insert sequence Length = 1691 Score = 474 bits (239), Expect = e-130 Identities = 500/587 (85%) Strand = Plus / Minus Query: 83 ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 142 |||||||||| ||| ||||||||||||||| ||| || | || || || |||||||| Sbjct: 1345 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1286 Query: 143 aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 202 | ||||| || || ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 1285 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1226 Query: 203 ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 262 ||||||||||||||||| || || |||||||||||||| |||||| || || |||||| Sbjct: 1225 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1166 Query: 263 ctggagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 322 || ||||| || || | |||| ||||||||||| || | || |||||||||||| Sbjct: 1165 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 1106 Query: 323 acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccggg 382 |||||||||||||| || || || || || ||||||||||| |||||||| || || ||| Sbjct: 1105 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatggattggcctggg 1046 Query: 383 aaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgccc 442 ||| |||| || | | | || | | ||||||| ||||||||||||||||||||||| ||| Sbjct: 1045 aagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtgcggaagataccc 986 Query: 443 ttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccg 502 ||||| ||||||| ||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 985 ttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttctccatacgcccg 926 Query: 503 tcacggatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgatgatgggcacg 562 |||||||| || || ||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 925 tcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatggggaca 866 Query: 563 cgggggttctcctccttgttgtacatccccgggagctgcacgttggtgggcgcgtccgcg 622 |||||||| |||||||||||||||||||| ||||||||||||||||| || ||| ||| Sbjct: 865 cgggggttgtcctccttgttgtacatcccagggagctgcacgttggttgggttgtcggcg 806 Query: 623 atgttcatcagggtggcgttcaccatctggttgttcaccgtgtactg 669 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 805 atgttcatcagggtggcgttcaccatctggttgttcaccgtgtactg 759
>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full insert sequence Length = 1470 Score = 474 bits (239), Expect = e-130 Identities = 500/587 (85%) Strand = Plus / Minus Query: 83 ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 142 |||||||||| ||| ||||||||||||||| ||| || | || || || |||||||| Sbjct: 1129 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1070 Query: 143 aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 202 | ||||| || || ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 1069 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1010 Query: 203 ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 262 ||||||||||||||||| || || |||||||||||||| |||||| || || |||||| Sbjct: 1009 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 950 Query: 263 ctggagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 322 || ||||| || || | |||| ||||||||||| || | || |||||||||||| Sbjct: 949 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 890 Query: 323 acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccggg 382 |||||||||||||| || || || || || ||||||||||| |||||||| || || ||| Sbjct: 889 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatggattggcctggg 830 Query: 383 aaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgccc 442 ||| |||| || | | | || | | ||||||| ||||||||||||||||||||||| ||| Sbjct: 829 aagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtgcggaagataccc 770 Query: 443 ttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccg 502 ||||| ||||||| ||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 769 ttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttctccatacgcccg 710 Query: 503 tcacggatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgatgatgggcacg 562 |||||||| || || ||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 709 tcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatggggaca 650 Query: 563 cgggggttctcctccttgttgtacatccccgggagctgcacgttggtgggcgcgtccgcg 622 |||||||| |||||||||||||||||||| ||||||||||||||||| || ||| ||| Sbjct: 649 cgggggttgtcctccttgttgtacatcccggggagctgcacgttggttgggttgtcggcg 590 Query: 623 atgttcatcagggtggcgttcaccatctggttgttcaccgtgtactg 669 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 589 atgttcatcagggtggcgttcaccatctggttgttcaccgtgtactg 543
>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform precursor, complete cds Length = 1706 Score = 474 bits (239), Expect = e-130 Identities = 500/587 (85%) Strand = Plus / Minus Query: 83 ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 142 |||||||||| ||| ||||||||||||||| ||| || | || || || |||||||| Sbjct: 1350 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1291 Query: 143 aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 202 | ||||| || || ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 1290 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1231 Query: 203 ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 262 ||||||||||||||||| || || |||||||||||||| |||||| || || |||||| Sbjct: 1230 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1171 Query: 263 ctggagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 322 || ||||| || || | |||| ||||||||||| || | || |||||||||||| Sbjct: 1170 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 1111 Query: 323 acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccggg 382 |||||||||||||| || || || || || ||||||||||| |||||||| || || ||| Sbjct: 1110 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatggattggcctggg 1051 Query: 383 aaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgccc 442 ||| |||| || | | | || | | ||||||| ||||||||||||||||||||||| ||| Sbjct: 1050 aagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtgcggaagataccc 991 Query: 443 ttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccg 502 ||||| ||||||| ||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 990 ttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttctccatacgcccg 931 Query: 503 tcacggatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgatgatgggcacg 562 |||||||| || || ||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 930 tcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatggggaca 871 Query: 563 cgggggttctcctccttgttgtacatccccgggagctgcacgttggtgggcgcgtccgcg 622 |||||||| |||||||||||||||||||| ||||||||||||||||| || ||| ||| Sbjct: 870 cgggggttgtcctccttgttgtacatcccggggagctgcacgttggttgggttgtcggcg 811 Query: 623 atgttcatcagggtggcgttcaccatctggttgttcaccgtgtactg 669 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 810 atgttcatcagggtggcgttcaccatctggttgttcaccgtgtactg 764
>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform precursor, complete cds Length = 1623 Score = 474 bits (239), Expect = e-130 Identities = 500/587 (85%) Strand = Plus / Minus Query: 83 ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 142 |||||||||| ||| ||||||||||||||| ||| || | || || || |||||||| Sbjct: 1344 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1285 Query: 143 aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 202 | ||||| || || ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 1284 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1225 Query: 203 ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 262 ||||||||||||||||| || || |||||||||||||| |||||| || || |||||| Sbjct: 1224 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1165 Query: 263 ctggagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 322 || ||||| || || | |||| ||||||||||| || | || |||||||||||| Sbjct: 1164 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 1105 Query: 323 acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccggg 382 |||||||||||||| || || || || || ||||||||||| |||||||| || || ||| Sbjct: 1104 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatggattggcctggg 1045 Query: 383 aaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgccc 442 ||| |||| || | | | || | | ||||||| ||||||||||||||||||||||| ||| Sbjct: 1044 aagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtgcggaagataccc 985 Query: 443 ttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccg 502 ||||| ||||||| ||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 984 ttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttctccatacgcccg 925 Query: 503 tcacggatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgatgatgggcacg 562 |||||||| || || ||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 924 tcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatggggaca 865 Query: 563 cgggggttctcctccttgttgtacatccccgggagctgcacgttggtgggcgcgtccgcg 622 |||||||| |||||||||||||||||||| ||||||||||||||||| || ||| ||| Sbjct: 864 cgggggttgtcctccttgttgtacatcccggggagctgcacgttggttgggttgtcggcg 805 Query: 623 atgttcatcagggtggcgttcaccatctggttgttcaccgtgtactg 669 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 804 atgttcatcagggtggcgttcaccatctggttgttcaccgtgtactg 758
>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase (rca) mRNA, complete cds Length = 1675 Score = 466 bits (235), Expect = e-128 Identities = 499/587 (85%) Strand = Plus / Minus Query: 83 ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 142 |||||||||| ||| ||||||||||||||| ||| || | || || || |||||||| Sbjct: 1314 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1255 Query: 143 aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 202 | ||||| || || ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 1254 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1195 Query: 203 ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 262 |||||||| |||||||| || || |||||||||||||| |||||| || || |||||| Sbjct: 1194 ccgtactcgatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1135 Query: 263 ctggagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 322 || ||||| || || | |||| ||||||||||| || | || |||||||||||| Sbjct: 1134 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 1075 Query: 323 acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccggg 382 |||||||||||||| || || || || || ||||||||||| |||||||| || || ||| Sbjct: 1074 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatggattggcctggg 1015 Query: 383 aaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgccc 442 ||| |||| || | | | || | | ||||||| ||||||||||||||||||||||| ||| Sbjct: 1014 aagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtgcggaagataccc 955 Query: 443 ttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccg 502 ||||| ||||||| ||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 954 ttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttctccatacgcccg 895 Query: 503 tcacggatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgatgatgggcacg 562 |||||||| || || ||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 894 tcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatggggaca 835 Query: 563 cgggggttctcctccttgttgtacatccccgggagctgcacgttggtgggcgcgtccgcg 622 |||||||| |||||||||||||||||||| ||||||||||||||||| || ||| ||| Sbjct: 834 cgggggttgtcctccttgttgtacatcccggggagctgcacgttggttgggttgtcggcg 775 Query: 623 atgttcatcagggtggcgttcaccatctggttgttcaccgtgtactg 669 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 774 atgttcatcagggtggcgttcaccatctggttgttcaccgtgtactg 728
>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1646 Score = 456 bits (230), Expect = e-125 Identities = 334/369 (90%) Strand = Plus / Minus Query: 311 acccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatg 370 ||||||||||||||||| ||||||||||||| || ||||| || ||||||||||||||| Sbjct: 1124 acccacttgcgcacctcaacgtcgtacacccgagcacgcagagcaccgaagaagtcgatg 1065 Query: 371 gactgccccgggaaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtg 430 ||||| || ||||| ||||| || | | | || || | |||||| |||||||||||| Sbjct: 1064 gactgtcctgggaangtgtcgacgatcttgacgacagactcgtcgctgacgttgtcggtc 1005 Query: 431 cggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttc 490 ||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1004 tggaagatacccttgcagacgccgatacggtcctcgcgggtgggcgcccagtagaacttc 945 Query: 491 tccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaagtcgttgccggtgacg 550 ||||| || ||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 944 tccatacgaccgtcacggatgaggggcgcgtacagcgtcgagaagtcgttgccggtgacg 885 Query: 551 atgatgggcacgcgggggttctcctccttgttgtacatccccgggagctgcacgttggtg 610 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 884 atgatggggacacgggggttctcctccttgttgtacatccccgggagctgcacgttggtg 825 Query: 611 ggcgcgtccgcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgc 670 |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 824 ggcgcgtcggcgatgttcatcagggtggcgttcaccatctggttgttcacggtgtactgg 765 Query: 671 gtcgtcccg 679 || |||||| Sbjct: 764 gtggtcccg 756 Score = 97.6 bits (49), Expect = 5e-17 Identities = 79/89 (88%) Strand = Plus / Minus Query: 158 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 217 ||||||||||||||||| || |||||||||||||| ||||||||||||||||||| | | Sbjct: 1277 agctgcacacgcttgacattgtcctgctcctggacaagcatgtggccgtactccagcaac 1218 Query: 218 ttctctatggtcatcttgggctggtcgaa 246 ||||| | |||||||||||||| ||||| Sbjct: 1217 ttctccaccgtcatcttgggctgctcgaa 1189
>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1616 Score = 424 bits (214), Expect = e-115 Identities = 330/369 (89%) Strand = Plus / Minus Query: 311 acccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatg 370 |||||||||||||||||||||||||||||||| || ||||| || ||||||||||||||| Sbjct: 1134 acccacttgcgcacctcgtcgtcgtacacccgagcacgcagagcaccgaagaagtcgatg 1075 Query: 371 gactgccccgggaaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtg 430 ||||| || ||||||||||| || | | | || || | |||||| |||||||||||| Sbjct: 1074 gactgtcctgggaaggtgtcgacgatcttgacgacagactcgtcgctgacgttgtcggtc 1015 Query: 431 cggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttc 490 ||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||||| Sbjct: 1014 tggaagatacccttgcagacgccgatacggtcctcgcgggtgggcgcccagtaaaacttc 955 Query: 491 tccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaagtcgttgccggtgacg 550 ||||| || |||||| | || ||||| |||||||||||||| ||||||||||||||||| Sbjct: 954 tccatacgaccgtcaggaataaggggggcgtacagcgtcgaaaagtcgttgccggtgacn 895 Query: 551 atgatgggcacgcgggggttctcctccttgttgtacatccccgggagctgcacgttggtg 610 || ||||| || |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 894 ataatgggaacacgggggttctcctccttgttgtacatccccggaagctgcacgttggtg 835 Query: 611 ggcgcgtccgcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgc 670 |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 834 ggcgcgtcggcgatgttcatcagggtggcgttcaccatctggttgttcacggtgtactgg 775 Query: 671 gtcgtcccg 679 || |||||| Sbjct: 774 gtggtcccg 766 Score = 97.6 bits (49), Expect = 5e-17 Identities = 79/89 (88%) Strand = Plus / Minus Query: 158 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 217 ||||||||||||||||| || |||||||||||||| ||||||||||||||||||| | | Sbjct: 1287 agctgcacacgcttgacattgtcctgctcctggacaagcatgtggccgtactccagcaac 1228 Query: 218 ttctctatggtcatcttgggctggtcgaa 246 ||||| | |||||||||||||| ||||| Sbjct: 1227 ttctccaccgtcatcttgggctgctcgaa 1199
>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA, partial cds; nuclear gene for chloroplast product Length = 651 Score = 418 bits (211), Expect = e-113 Identities = 475/563 (84%) Strand = Plus / Minus Query: 83 ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 142 |||||||||| ||| ||||||||||||||| ||| || | || || || |||||||| Sbjct: 563 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 504 Query: 143 aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 202 | ||||| || || ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 503 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 444 Query: 203 ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 262 |||||||| |||||||| || || |||||||||||||| |||||| || || |||||| Sbjct: 443 ccgtactcgatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 384 Query: 263 ctggagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 322 || ||||| || || | |||| ||||||||||| || | || |||||||||||| Sbjct: 383 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 324 Query: 323 acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccggg 382 |||||||||||||| || || || || || ||||||||||| |||||||| || || ||| Sbjct: 323 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatggattggcctggg 264 Query: 383 aaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgccc 442 ||| |||| || | | | || | | ||||||| ||||||||||||||||||||||| ||| Sbjct: 263 aagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtgcggaagataccc 204 Query: 443 ttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccg 502 ||||| ||||||| ||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 203 ttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttctccatacgcccg 144 Query: 503 tcacggatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgatgatgggcacg 562 |||||||| || || ||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 143 tcacggatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatggggaca 84 Query: 563 cgggggttctcctccttgttgtacatccccgggagctgcacgttggtgggcgcgtccgcg 622 |||||||| |||||||||||||||||||| ||||||||||||||||| || ||| ||| Sbjct: 83 cgggggttgtcctccttgttgtacatcccggggagctgcacgttggttgggttgtcggcg 24 Query: 623 atgttcatcagggtggcgttcac 645 ||||||||||||||||||||||| Sbjct: 23 atgttcatcagggtggcgttcac 1
>gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 genomic sequence Length = 633 Score = 408 bits (206), Expect = e-111 Identities = 308/342 (90%) Strand = Plus / Minus Query: 328 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 387 ||||||||| |||| || || || ||||||||||||||||||||||| |||||||||| Sbjct: 633 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 574 Query: 388 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 447 ||| || ||| || ||| |||||| |||||| |||||||||||||||||||||||| Sbjct: 573 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 514 Query: 448 cacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacg 507 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 513 cacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcccgtcacg 454 Query: 508 gatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgatgatgggcacgcgggg 567 ||| || || ||||||||||| |||||||||||||||||||||||||||||||| || || Sbjct: 453 gatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggcacacgcgg 394 Query: 568 gttctcctccttgttgtacatccccgggagctgcacgttggtgggcgcgtccgcgatgtt 627 ||| ||| ||||| ||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 393 gttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcggcgatgtt 334 Query: 628 catcagggtggcgttcaccatctggttgttcaccgtgtactg 669 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 333 catcagggtggcgttcaccatctggttgttcaccgtgtactg 292
>gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 genomic sequence Length = 635 Score = 408 bits (206), Expect = e-111 Identities = 308/342 (90%) Strand = Plus / Minus Query: 328 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 387 ||||||||| |||| || || || ||||||||||||||||||||||| |||||||||| Sbjct: 635 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 576 Query: 388 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 447 ||| || ||| || ||| |||||| |||||| |||||||||||||||||||||||| Sbjct: 575 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 516 Query: 448 cacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacg 507 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 515 cacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcccgtcacg 456 Query: 508 gatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgatgatgggcacgcgggg 567 ||| || || ||||||||||| |||||||||||||||||||||||||||||||| || || Sbjct: 455 gatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggcacacgcgg 396 Query: 568 gttctcctccttgttgtacatccccgggagctgcacgttggtgggcgcgtccgcgatgtt 627 ||| ||| ||||| ||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 395 gttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcggcgatgtt 336 Query: 628 catcagggtggcgttcaccatctggttgttcaccgtgtactg 669 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 335 catcagggtggcgttcaccatctggttgttcaccgtgtactg 294
>gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 genomic sequence Length = 639 Score = 408 bits (206), Expect = e-111 Identities = 308/342 (90%) Strand = Plus / Minus Query: 328 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 387 ||||||||| |||| || || || ||||||||||||||||||||||| |||||||||| Sbjct: 639 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 580 Query: 388 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 447 ||| || ||| || ||| |||||| |||||| |||||||||||||||||||||||| Sbjct: 579 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 520 Query: 448 cacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacg 507 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 519 cacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcccgtcacg 460 Query: 508 gatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgatgatgggcacgcgggg 567 ||| || || ||||||||||| |||||||||||||||||||||||||||||||| || || Sbjct: 459 gatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggcacacgcgg 400 Query: 568 gttctcctccttgttgtacatccccgggagctgcacgttggtgggcgcgtccgcgatgtt 627 ||| ||| ||||| ||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 399 gttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcggcgatgtt 340 Query: 628 catcagggtggcgttcaccatctggttgttcaccgtgtactg 669 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 catcagggtggcgttcaccatctggttgttcaccgtgtactg 298
>gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 genomic sequence Length = 635 Score = 408 bits (206), Expect = e-111 Identities = 308/342 (90%) Strand = Plus / Minus Query: 328 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 387 ||||||||| |||| || || || ||||||||||||||||||||||| |||||||||| Sbjct: 635 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 576 Query: 388 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 447 ||| || ||| || ||| |||||| |||||| |||||||||||||||||||||||| Sbjct: 575 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 516 Query: 448 cacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacg 507 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 515 cacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcccgtcacg 456 Query: 508 gatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgatgatgggcacgcgggg 567 ||| || || ||||||||||| |||||||||||||||||||||||||||||||| || || Sbjct: 455 gatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggcacacgcgg 396 Query: 568 gttctcctccttgttgtacatccccgggagctgcacgttggtgggcgcgtccgcgatgtt 627 ||| ||| ||||| ||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 395 gttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcggcgatgtt 336 Query: 628 catcagggtggcgttcaccatctggttgttcaccgtgtactg 669 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 335 catcagggtggcgttcaccatctggttgttcaccgtgtactg 294
>gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 genomic sequence Length = 627 Score = 408 bits (206), Expect = e-111 Identities = 308/342 (90%) Strand = Plus / Minus Query: 328 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 387 ||||||||||||||| || || || ||||||||||||||||||||||| |||||||||| Sbjct: 627 gtcgtcgtacacccgggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 568 Query: 388 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 447 ||| || ||| || ||| |||||| |||||| |||||||||||||||||||||||| Sbjct: 567 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 508 Query: 448 cacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacg 507 |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || Sbjct: 507 cacgccgatgcggtcctcccgggtgggcgcccagtagaacttgtccatgcgcccgtcgcg 448 Query: 508 gatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgatgatgggcacgcgggg 567 ||| || || ||||||||||| |||||||||||||||||||||| ||||||||| || || Sbjct: 447 gatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgacgatgggcacacgcgg 388 Query: 568 gttctcctccttgttgtacatccccgggagctgcacgttggtgggcgcgtccgcgatgtt 627 ||| ||| ||||| ||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 387 gttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcggcgatgtt 328 Query: 628 catcagggtggcgttcaccatctggttgttcaccgtgtactg 669 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 327 catcagggtggcgttcaccatctggttgttcaccgtgtactg 286
>gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 genomic sequence Length = 635 Score = 408 bits (206), Expect = e-111 Identities = 308/342 (90%) Strand = Plus / Minus Query: 328 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 387 ||||||||| |||| || || || ||||||||||||||||||||||| |||||||||| Sbjct: 635 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 576 Query: 388 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 447 ||| || ||| || ||| |||||| |||||| |||||||||||||||||||||||| Sbjct: 575 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 516 Query: 448 cacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacg 507 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 515 cacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcccgtcacg 456 Query: 508 gatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgatgatgggcacgcgggg 567 ||| || || ||||||||||| |||||||||||||||||||||||||||||||| || || Sbjct: 455 gatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggcacacgcgg 396 Query: 568 gttctcctccttgttgtacatccccgggagctgcacgttggtgggcgcgtccgcgatgtt 627 ||| ||| ||||| ||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 395 gttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcggcgatgtt 336 Query: 628 catcagggtggcgttcaccatctggttgttcaccgtgtactg 669 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 335 catcagggtggcgttcaccatctggttgttcaccgtgtactg 294
>gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 genomic sequence Length = 635 Score = 408 bits (206), Expect = e-111 Identities = 308/342 (90%) Strand = Plus / Minus Query: 328 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 387 ||||||||| |||| || || || ||||||||||||||||||||||| |||||||||| Sbjct: 635 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 576 Query: 388 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 447 ||| || ||| || ||| |||||| |||||| |||||||||||||||||||||||| Sbjct: 575 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 516 Query: 448 cacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacg 507 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 515 cacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcccgtcacg 456 Query: 508 gatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgatgatgggcacgcgggg 567 ||| || || ||||||||||| |||||||||||||||||||||||||||||||| || || Sbjct: 455 gatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggcacacgcgg 396 Query: 568 gttctcctccttgttgtacatccccgggagctgcacgttggtgggcgcgtccgcgatgtt 627 ||| ||| ||||| ||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 395 gttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcggcgatgtt 336 Query: 628 catcagggtggcgttcaccatctggttgttcaccgtgtactg 669 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 335 catcagggtggcgttcaccatctggttgttcaccgtgtactg 294
>gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 genomic sequence Length = 635 Score = 408 bits (206), Expect = e-111 Identities = 308/342 (90%) Strand = Plus / Minus Query: 328 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 387 ||||||||| |||| || || || ||||||||||||||||||||||| |||||||||| Sbjct: 635 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 576 Query: 388 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 447 ||| || ||| || ||| |||||| |||||| |||||||||||||||||||||||| Sbjct: 575 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 516 Query: 448 cacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacg 507 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 515 cacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcccgtcacg 456 Query: 508 gatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgatgatgggcacgcgggg 567 ||| || || ||||||||||| |||||||||||||||||||||||||||||||| || || Sbjct: 455 gatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggcacacgcgg 396 Query: 568 gttctcctccttgttgtacatccccgggagctgcacgttggtgggcgcgtccgcgatgtt 627 ||| ||| ||||| ||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 395 gttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcggcgatgtt 336 Query: 628 catcagggtggcgttcaccatctggttgttcaccgtgtactg 669 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 335 catcagggtggcgttcaccatctggttgttcaccgtgtactg 294
>gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 genomic sequence Length = 637 Score = 408 bits (206), Expect = e-111 Identities = 308/342 (90%) Strand = Plus / Minus Query: 328 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 387 ||||||||| |||| || || || ||||||||||||||||||||||| |||||||||| Sbjct: 637 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 578 Query: 388 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 447 ||| || ||| || ||| |||||| |||||| |||||||||||||||||||||||| Sbjct: 577 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 518 Query: 448 cacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacg 507 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 517 cacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcccgtcacg 458 Query: 508 gatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgatgatgggcacgcgggg 567 ||| || || ||||||||||| |||||||||||||||||||||||||||||||| || || Sbjct: 457 gatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggcacacgcgg 398 Query: 568 gttctcctccttgttgtacatccccgggagctgcacgttggtgggcgcgtccgcgatgtt 627 ||| ||| ||||| ||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 397 gttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcggcgatgtt 338 Query: 628 catcagggtggcgttcaccatctggttgttcaccgtgtactg 669 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 337 catcagggtggcgttcaccatctggttgttcaccgtgtactg 296
>gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence Length = 619 Score = 400 bits (202), Expect = e-108 Identities = 307/342 (89%) Strand = Plus / Minus Query: 328 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 387 ||||||||||||||| || || || ||||||||||||||||||||||| |||||||||| Sbjct: 619 gtcgtcgtacacccgggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 560 Query: 388 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 447 ||| || ||| || ||| |||||| |||||| |||||||||||||||||||||||| Sbjct: 559 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 500 Query: 448 cacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacg 507 ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| || Sbjct: 499 cacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcccgtcgcg 440 Query: 508 gatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgatgatgggcacgcgggg 567 || || || ||||||||||| |||||||||||||||||||||| ||||||||| || || Sbjct: 439 aatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgacgatgggcacacgcgg 380 Query: 568 gttctcctccttgttgtacatccccgggagctgcacgttggtgggcgcgtccgcgatgtt 627 ||| ||| ||||| ||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 379 gttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcggcgatgtt 320 Query: 628 catcagggtggcgttcaccatctggttgttcaccgtgtactg 669 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 319 catcagggtggcgttcaccatctggttgttcaccgtgtactg 278
>gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 genomic sequence Length = 637 Score = 400 bits (202), Expect = e-108 Identities = 307/342 (89%) Strand = Plus / Minus Query: 328 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 387 ||||||||| |||| || || || ||||||||||||||||||||||| |||||||||| Sbjct: 637 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 578 Query: 388 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 447 ||| || ||| || ||| |||||| |||||| |||||||||||||||||||||||| Sbjct: 577 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 518 Query: 448 cacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacg 507 ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| || Sbjct: 517 cacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcccgtcgcg 458 Query: 508 gatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgatgatgggcacgcgggg 567 ||| || || ||||||||||| |||||||||||||||||||||||||||||||| || || Sbjct: 457 gatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggcacacgcgg 398 Query: 568 gttctcctccttgttgtacatccccgggagctgcacgttggtgggcgcgtccgcgatgtt 627 ||| ||| ||||| ||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 397 gttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcggcgatgtt 338 Query: 628 catcagggtggcgttcaccatctggttgttcaccgtgtactg 669 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 337 catcagggtggcgttcaccatctggttgttcaccgtgtactg 296
>gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 genomic sequence Length = 635 Score = 400 bits (202), Expect = e-108 Identities = 307/342 (89%) Strand = Plus / Minus Query: 328 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 387 ||||||||| |||| || || || ||||||||||||||||||||||| |||||||||| Sbjct: 635 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 576 Query: 388 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 447 ||| || ||| || ||| |||||| |||||| |||||||||||||||||||||||| Sbjct: 575 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 516 Query: 448 cacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacg 507 ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| || Sbjct: 515 cacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcccgtcgcg 456 Query: 508 gatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgatgatgggcacgcgggg 567 ||| || || ||||||||||| |||||||||||||||||||||||||||||||| || || Sbjct: 455 gatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggcacacgcgg 396 Query: 568 gttctcctccttgttgtacatccccgggagctgcacgttggtgggcgcgtccgcgatgtt 627 ||| ||| ||||| ||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 395 gttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcggcgatgtt 336 Query: 628 catcagggtggcgttcaccatctggttgttcaccgtgtactg 669 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 335 catcagggtggcgttcaccatctggttgttcaccgtgtactg 294
>gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 genomic sequence Length = 635 Score = 400 bits (202), Expect = e-108 Identities = 307/342 (89%) Strand = Plus / Minus Query: 328 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 387 ||||||||| |||| || || || ||||||||||||||||||||||| |||||||||| Sbjct: 635 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 576 Query: 388 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 447 ||| || ||| || ||| |||||| |||||| |||||||||||||||||||||||| Sbjct: 575 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 516 Query: 448 cacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacg 507 ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| || Sbjct: 515 cacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcccgtcgcg 456 Query: 508 gatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgatgatgggcacgcgggg 567 ||| || || ||||||||||| |||||||||||||||||||||||||||||||| || || Sbjct: 455 gatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggcacacgcgg 396 Query: 568 gttctcctccttgttgtacatccccgggagctgcacgttggtgggcgcgtccgcgatgtt 627 ||| ||| ||||| ||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 395 gttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcggcgatgtt 336 Query: 628 catcagggtggcgttcaccatctggttgttcaccgtgtactg 669 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 335 catcagggtggcgttcaccatctggttgttcaccgtgtactg 294
>gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genomic sequence Length = 639 Score = 400 bits (202), Expect = e-108 Identities = 307/342 (89%) Strand = Plus / Minus Query: 328 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 387 ||||||||| |||| || || || ||||||||||||||||||||||| |||||||||| Sbjct: 639 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 580 Query: 388 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 447 ||| || ||| || ||| |||||| |||||| |||||||||||||||||||||||| Sbjct: 579 gtcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgca 520 Query: 448 cacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacg 507 ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| || Sbjct: 519 cacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcccgtcgcg 460 Query: 508 gatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgatgatgggcacgcgggg 567 ||| || || ||||||||||| |||||||||||||||||||||||||||||||| || || Sbjct: 459 gatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggcacacgcgg 400 Query: 568 gttctcctccttgttgtacatccccgggagctgcacgttggtgggcgcgtccgcgatgtt 627 ||| ||| ||||| ||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 399 gttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcggcgatgtt 340 Query: 628 catcagggtggcgttcaccatctggttgttcaccgtgtactg 669 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 catcagggtggcgttcaccatctggttgttcaccgtgtactg 298
>gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 genomic sequence Length = 633 Score = 392 bits (198), Expect = e-106 Identities = 306/342 (89%) Strand = Plus / Minus Query: 328 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 387 ||||||||| |||| || || || ||||||||||||||||||||||| |||||||||| Sbjct: 633 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 574 Query: 388 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 447 ||| || ||| || ||| |||||| |||||| |||| ||||||||||||||||||| Sbjct: 573 gtcgacgagctggacgacgtgctcgtcggggacgccgtcgttgcggaagatgcccttgca 514 Query: 448 cacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacg 507 ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| || Sbjct: 513 cacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcccgtcgcg 454 Query: 508 gatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgatgatgggcacgcgggg 567 ||| || || ||||||||||| |||||||||||||||||||||||||||||||| || || Sbjct: 453 gatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggcacacgcgg 394 Query: 568 gttctcctccttgttgtacatccccgggagctgcacgttggtgggcgcgtccgcgatgtt 627 ||| ||| ||||| ||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 393 gttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcggcgatgtt 334 Query: 628 catcagggtggcgttcaccatctggttgttcaccgtgtactg 669 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 333 catcagggtggcgttcaccatctggttgttcaccgtgtactg 292
>gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 genomic sequence Length = 633 Score = 392 bits (198), Expect = e-106 Identities = 306/342 (89%) Strand = Plus / Minus Query: 328 gtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggt 387 ||||||||| |||| || || || ||||||||||||||||||||||| |||||||||| Sbjct: 633 gtcgtcgtataccctggcgcggagggcgccgaagaagtcgatggactggcccgggaaggc 574 Query: 388 gtccaccagcctcaccacggcctcgtccgggacgttgtcggtgcggaagatgcccttgca 447 ||| || ||| || ||| |||||| |||||| |||| ||||||||||||||||||| Sbjct: 573 gtcgacgagctggacgacgtgctcgtcggggacgccgtcgttgcggaagatgcccttgca 514 Query: 448 cacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacg 507 ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| || Sbjct: 513 cacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccatgcgcccgtcgcg 454 Query: 508 gatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgatgatgggcacgcgggg 567 ||| || || ||||||||||| |||||||||||||||||||||||||||||||| || || Sbjct: 453 gatgagcggcgcgtacagcgtggagaagtcgttgccggtgacgatgatgggcacacgcgg 394 Query: 568 gttctcctccttgttgtacatccccgggagctgcacgttggtgggcgcgtccgcgatgtt 627 ||| ||| ||||| ||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 393 gttgtccaccttgctgtacatccccgggagctgcacgttggtggggttgtcggcgatgtt 334 Query: 628 catcagggtggcgttcaccatctggttgttcaccgtgtactg 669 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 333 catcagggtggcgttcaccatctggttgttcaccgtgtactg 292
>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04 map S10003, complete sequence Length = 119238 Score = 353 bits (178), Expect = 5e-94 Identities = 241/262 (91%) Strand = Plus / Plus Query: 408 cctcgtccgggacgttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgc 467 ||||||| ||||||||||||||||||||||| |||||||| ||||||| ||||| |||| Sbjct: 108728 cctcgtcggggacgttgtcggtgcggaagatacccttgcagacgccgacacggtcgtcgc 108787 Query: 468 gggtgggcgcccagtagaacttctccatgcgcccgtcacggatcaggggagcgtacagcg 527 ||||||| |||||||||||||||||||| |||||||||||||| || || |||||||||| Sbjct: 108788 gggtgggagcccagtagaacttctccatacgcccgtcacggatgagcggcgcgtacagcg 108847 Query: 528 tcgagaagtcgttgccggtgacgatgatgggcacgcgggggttctcctccttgttgtaca 587 | ||||||||||||||||||||||||||||| || |||||||| |||||||||||||||| Sbjct: 108848 tggagaagtcgttgccggtgacgatgatggggacacgggggttgtcctccttgttgtaca 108907 Query: 588 tccccgggagctgcacgttggtgggcgcgtccgcgatgttcatcagggtggcgttcacca 647 |||| ||||||||||||||||| || ||| |||||||||||||||||||||||||||| Sbjct: 108908 tcccggggagctgcacgttggttgggttgtcggcgatgttcatcagggtggcgttcacca 108967 Query: 648 tctggttgttcaccgtgtactg 669 |||||||||||||||||||||| Sbjct: 108968 tctggttgttcaccgtgtactg 108989 Score = 143 bits (72), Expect = 9e-31 Identities = 90/96 (93%) Strand = Plus / Plus Query: 580 gttgtacatccccgggagctgcacgttggtgggcgcgtccgcgatgttcatcagggtggc 639 |||||||||||| |||||||||||||||||||| |||||||||||||||||| || || Sbjct: 112577 gttgtacatccctgggagctgcacgttggtggggttgtccgcgatgttcatcagcgtcgc 112636 Query: 640 gttcaccatctggttgttcaccgtgtactgcgtcgt 675 |||||||||||||||||||||||||||||||||||| Sbjct: 112637 gttcaccatctggttgttcaccgtgtactgcgtcgt 112672 Score = 137 bits (69), Expect = 5e-29 Identities = 228/281 (81%) Strand = Plus / Plus Query: 83 ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 142 |||||||||| ||| ||||||||||||||| ||| || | || || || |||||||| Sbjct: 108311 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 108370 Query: 143 aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 202 | ||||| || || ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 108371 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 108430 Query: 203 ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 262 ||||||||||||||||| || || |||||||||||||| |||||| || || |||||| Sbjct: 108431 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 108490 Query: 263 ctggagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 322 || ||||| || || | |||| ||||||||||| || | || |||||||||||| Sbjct: 108491 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 108550 Query: 323 acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaa 363 |||||||||||||| || || || || || ||||||||||| Sbjct: 108551 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaa 108591 Score = 135 bits (68), Expect = 2e-28 Identities = 92/100 (92%) Strand = Plus / Plus Query: 411 cgtccgggacgttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgcggg 470 |||| ||||| |||||| |||||||||||||| |||||||||| |||||||||||||||| Sbjct: 112435 cgtcggggaccttgtcgctgcggaagatgcccctgcacacgccaatgcggtcctcgcggg 112494 Query: 471 tgggcgcccagtagaacttctccatgcgcccgtcacggat 510 |||| |||||||||||||| |||||||||||||| ||||| Sbjct: 112495 tgggagcccagtagaacttgtccatgcgcccgtcgcggat 112534 Score = 109 bits (55), Expect = 1e-20 Identities = 104/120 (86%), Gaps = 4/120 (3%) Strand = Plus / Plus Query: 125 ccgagcgccgcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgc 184 |||||||||||||||||||||||||| ||||||||| |||| | |||||||||||||||| Sbjct: 112186 ccgagcgccgcctcgctgaggtacttatcggcgagccgcaccctcttgacgttctcctgc 112245 Query: 185 tcctggaccagcatgt----ggccgtactccatgagcttctctatggtcatcttgggctg 240 ||| |||||||||| | ||||||||||| ||||| || || |||||||||||||| Sbjct: 112246 tccctcaccagcatgtgccggcccgtactccatcagcttgtcgatcgtcatcttgggctg 112305 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 286 gatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtacacccgtgc 345 |||||||||||| |||||||| | |||||| |||||||||||| |||||||||| || Sbjct: 112344 gatgttctccaccccgatctccgccacccaccgccgcacctcgtcgccgtacacccgcgc 112403 Query: 346 ccgcagcgcgccgaagaagtcgatgg 371 ||||||||| |||||||||||||||| Sbjct: 112404 ccgcagcgccccgaagaagtcgatgg 112429 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 530 gagaagtcgttgccggtgacgatgatggg 558 ||||||||||||||||||||||||||||| Sbjct: 112541 gagaagtcgttgccggtgacgatgatggg 112569
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026K20 map S10559, complete sequence Length = 115996 Score = 353 bits (178), Expect = 5e-94 Identities = 241/262 (91%) Strand = Plus / Plus Query: 408 cctcgtccgggacgttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgc 467 ||||||| ||||||||||||||||||||||| |||||||| ||||||| ||||| |||| Sbjct: 30605 cctcgtcggggacgttgtcggtgcggaagatacccttgcagacgccgacacggtcgtcgc 30664 Query: 468 gggtgggcgcccagtagaacttctccatgcgcccgtcacggatcaggggagcgtacagcg 527 ||||||| |||||||||||||||||||| |||||||||||||| || || |||||||||| Sbjct: 30665 gggtgggagcccagtagaacttctccatacgcccgtcacggatgagcggcgcgtacagcg 30724 Query: 528 tcgagaagtcgttgccggtgacgatgatgggcacgcgggggttctcctccttgttgtaca 587 | ||||||||||||||||||||||||||||| || |||||||| |||||||||||||||| Sbjct: 30725 tggagaagtcgttgccggtgacgatgatggggacacgggggttgtcctccttgttgtaca 30784 Query: 588 tccccgggagctgcacgttggtgggcgcgtccgcgatgttcatcagggtggcgttcacca 647 |||| ||||||||||||||||| || ||| |||||||||||||||||||||||||||| Sbjct: 30785 tcccggggagctgcacgttggttgggttgtcggcgatgttcatcagggtggcgttcacca 30844 Query: 648 tctggttgttcaccgtgtactg 669 |||||||||||||||||||||| Sbjct: 30845 tctggttgttcaccgtgtactg 30866 Score = 143 bits (72), Expect = 9e-31 Identities = 90/96 (93%) Strand = Plus / Plus Query: 580 gttgtacatccccgggagctgcacgttggtgggcgcgtccgcgatgttcatcagggtggc 639 |||||||||||| |||||||||||||||||||| |||||||||||||||||| || || Sbjct: 34454 gttgtacatccctgggagctgcacgttggtggggttgtccgcgatgttcatcagcgtcgc 34513 Query: 640 gttcaccatctggttgttcaccgtgtactgcgtcgt 675 |||||||||||||||||||||||||||||||||||| Sbjct: 34514 gttcaccatctggttgttcaccgtgtactgcgtcgt 34549 Score = 137 bits (69), Expect = 5e-29 Identities = 228/281 (81%) Strand = Plus / Plus Query: 83 ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 142 |||||||||| ||| ||||||||||||||| ||| || | || || || |||||||| Sbjct: 30188 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 30247 Query: 143 aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 202 | ||||| || || ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 30248 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 30307 Query: 203 ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 262 ||||||||||||||||| || || |||||||||||||| |||||| || || |||||| Sbjct: 30308 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 30367 Query: 263 ctggagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 322 || ||||| || || | |||| ||||||||||| || | || |||||||||||| Sbjct: 30368 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 30427 Query: 323 acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaa 363 |||||||||||||| || || || || || ||||||||||| Sbjct: 30428 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaa 30468 Score = 135 bits (68), Expect = 2e-28 Identities = 92/100 (92%) Strand = Plus / Plus Query: 411 cgtccgggacgttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgcggg 470 |||| ||||| |||||| |||||||||||||| |||||||||| |||||||||||||||| Sbjct: 34312 cgtcggggaccttgtcgctgcggaagatgcccctgcacacgccaatgcggtcctcgcggg 34371 Query: 471 tgggcgcccagtagaacttctccatgcgcccgtcacggat 510 |||| |||||||||||||| |||||||||||||| ||||| Sbjct: 34372 tgggagcccagtagaacttgtccatgcgcccgtcgcggat 34411 Score = 109 bits (55), Expect = 1e-20 Identities = 104/120 (86%), Gaps = 4/120 (3%) Strand = Plus / Plus Query: 125 ccgagcgccgcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgc 184 |||||||||||||||||||||||||| ||||||||| |||| | |||||||||||||||| Sbjct: 34063 ccgagcgccgcctcgctgaggtacttatcggcgagccgcaccctcttgacgttctcctgc 34122 Query: 185 tcctggaccagcatgt----ggccgtactccatgagcttctctatggtcatcttgggctg 240 ||| |||||||||| | ||||||||||| ||||| || || |||||||||||||| Sbjct: 34123 tccctcaccagcatgtgccggcccgtactccatcagcttgtcgatcgtcatcttgggctg 34182 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 286 gatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtacacccgtgc 345 |||||||||||| |||||||| | |||||| |||||||||||| |||||||||| || Sbjct: 34221 gatgttctccaccccgatctccgccacccaccgccgcacctcgtcgccgtacacccgcgc 34280 Query: 346 ccgcagcgcgccgaagaagtcgatgg 371 ||||||||| |||||||||||||||| Sbjct: 34281 ccgcagcgccccgaagaagtcgatgg 34306 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 530 gagaagtcgttgccggtgacgatgatggg 558 ||||||||||||||||||||||||||||| Sbjct: 34418 gagaagtcgttgccggtgacgatgatggg 34446
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 353 bits (178), Expect = 5e-94 Identities = 241/262 (91%) Strand = Plus / Plus Query: 408 cctcgtccgggacgttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgc 467 ||||||| ||||||||||||||||||||||| |||||||| ||||||| ||||| |||| Sbjct: 28303867 cctcgtcggggacgttgtcggtgcggaagatacccttgcagacgccgacacggtcgtcgc 28303926 Query: 468 gggtgggcgcccagtagaacttctccatgcgcccgtcacggatcaggggagcgtacagcg 527 ||||||| |||||||||||||||||||| |||||||||||||| || || |||||||||| Sbjct: 28303927 gggtgggagcccagtagaacttctccatacgcccgtcacggatgagcggcgcgtacagcg 28303986 Query: 528 tcgagaagtcgttgccggtgacgatgatgggcacgcgggggttctcctccttgttgtaca 587 | ||||||||||||||||||||||||||||| || |||||||| |||||||||||||||| Sbjct: 28303987 tggagaagtcgttgccggtgacgatgatggggacacgggggttgtcctccttgttgtaca 28304046 Query: 588 tccccgggagctgcacgttggtgggcgcgtccgcgatgttcatcagggtggcgttcacca 647 |||| ||||||||||||||||| || ||| |||||||||||||||||||||||||||| Sbjct: 28304047 tcccggggagctgcacgttggttgggttgtcggcgatgttcatcagggtggcgttcacca 28304106 Query: 648 tctggttgttcaccgtgtactg 669 |||||||||||||||||||||| Sbjct: 28304107 tctggttgttcaccgtgtactg 28304128 Score = 143 bits (72), Expect = 9e-31 Identities = 90/96 (93%) Strand = Plus / Plus Query: 580 gttgtacatccccgggagctgcacgttggtgggcgcgtccgcgatgttcatcagggtggc 639 |||||||||||| |||||||||||||||||||| |||||||||||||||||| || || Sbjct: 28307716 gttgtacatccctgggagctgcacgttggtggggttgtccgcgatgttcatcagcgtcgc 28307775 Query: 640 gttcaccatctggttgttcaccgtgtactgcgtcgt 675 |||||||||||||||||||||||||||||||||||| Sbjct: 28307776 gttcaccatctggttgttcaccgtgtactgcgtcgt 28307811 Score = 137 bits (69), Expect = 5e-29 Identities = 228/281 (81%) Strand = Plus / Plus Query: 83 ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 142 |||||||||| ||| ||||||||||||||| ||| || | || || || |||||||| Sbjct: 28303450 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 28303509 Query: 143 aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 202 | ||||| || || ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 28303510 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 28303569 Query: 203 ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 262 ||||||||||||||||| || || |||||||||||||| |||||| || || |||||| Sbjct: 28303570 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 28303629 Query: 263 ctggagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 322 || ||||| || || | |||| ||||||||||| || | || |||||||||||| Sbjct: 28303630 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 28303689 Query: 323 acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaa 363 |||||||||||||| || || || || || ||||||||||| Sbjct: 28303690 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaa 28303730 Score = 135 bits (68), Expect = 2e-28 Identities = 92/100 (92%) Strand = Plus / Plus Query: 411 cgtccgggacgttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgcggg 470 |||| ||||| |||||| |||||||||||||| |||||||||| |||||||||||||||| Sbjct: 28307574 cgtcggggaccttgtcgctgcggaagatgcccctgcacacgccaatgcggtcctcgcggg 28307633 Query: 471 tgggcgcccagtagaacttctccatgcgcccgtcacggat 510 |||| |||||||||||||| |||||||||||||| ||||| Sbjct: 28307634 tgggagcccagtagaacttgtccatgcgcccgtcgcggat 28307673 Score = 109 bits (55), Expect = 1e-20 Identities = 104/120 (86%), Gaps = 4/120 (3%) Strand = Plus / Plus Query: 125 ccgagcgccgcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgc 184 |||||||||||||||||||||||||| ||||||||| |||| | |||||||||||||||| Sbjct: 28307325 ccgagcgccgcctcgctgaggtacttatcggcgagccgcaccctcttgacgttctcctgc 28307384 Query: 185 tcctggaccagcatgt----ggccgtactccatgagcttctctatggtcatcttgggctg 240 ||| |||||||||| | ||||||||||| ||||| || || |||||||||||||| Sbjct: 28307385 tccctcaccagcatgtgccggcccgtactccatcagcttgtcgatcgtcatcttgggctg 28307444 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 286 gatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtacacccgtgc 345 |||||||||||| |||||||| | |||||| |||||||||||| |||||||||| || Sbjct: 28307483 gatgttctccaccccgatctccgccacccaccgccgcacctcgtcgccgtacacccgcgc 28307542 Query: 346 ccgcagcgcgccgaagaagtcgatgg 371 ||||||||| |||||||||||||||| Sbjct: 28307543 ccgcagcgccccgaagaagtcgatgg 28307568 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 530 gagaagtcgttgccggtgacgatgatggg 558 ||||||||||||||||||||||||||||| Sbjct: 28307680 gagaagtcgttgccggtgacgatgatggg 28307708
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 353 bits (178), Expect = 5e-94 Identities = 241/262 (91%) Strand = Plus / Plus Query: 408 cctcgtccgggacgttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgc 467 ||||||| ||||||||||||||||||||||| |||||||| ||||||| ||||| |||| Sbjct: 28286316 cctcgtcggggacgttgtcggtgcggaagatacccttgcagacgccgacacggtcgtcgc 28286375 Query: 468 gggtgggcgcccagtagaacttctccatgcgcccgtcacggatcaggggagcgtacagcg 527 ||||||| |||||||||||||||||||| |||||||||||||| || || |||||||||| Sbjct: 28286376 gggtgggagcccagtagaacttctccatacgcccgtcacggatgagcggcgcgtacagcg 28286435 Query: 528 tcgagaagtcgttgccggtgacgatgatgggcacgcgggggttctcctccttgttgtaca 587 | ||||||||||||||||||||||||||||| || |||||||| |||||||||||||||| Sbjct: 28286436 tggagaagtcgttgccggtgacgatgatggggacacgggggttgtcctccttgttgtaca 28286495 Query: 588 tccccgggagctgcacgttggtgggcgcgtccgcgatgttcatcagggtggcgttcacca 647 |||| ||||||||||||||||| || ||| |||||||||||||||||||||||||||| Sbjct: 28286496 tcccggggagctgcacgttggttgggttgtcggcgatgttcatcagggtggcgttcacca 28286555 Query: 648 tctggttgttcaccgtgtactg 669 |||||||||||||||||||||| Sbjct: 28286556 tctggttgttcaccgtgtactg 28286577 Score = 143 bits (72), Expect = 9e-31 Identities = 90/96 (93%) Strand = Plus / Plus Query: 580 gttgtacatccccgggagctgcacgttggtgggcgcgtccgcgatgttcatcagggtggc 639 |||||||||||| |||||||||||||||||||| |||||||||||||||||| || || Sbjct: 28290165 gttgtacatccctgggagctgcacgttggtggggttgtccgcgatgttcatcagcgtcgc 28290224 Query: 640 gttcaccatctggttgttcaccgtgtactgcgtcgt 675 |||||||||||||||||||||||||||||||||||| Sbjct: 28290225 gttcaccatctggttgttcaccgtgtactgcgtcgt 28290260 Score = 137 bits (69), Expect = 5e-29 Identities = 228/281 (81%) Strand = Plus / Plus Query: 83 ccgtagaaggcaccggtcttcatggcgtcgtcgttggcttggccgagcgccgcctcgctg 142 |||||||||| ||| ||||||||||||||| ||| || | || || || |||||||| Sbjct: 28285899 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 28285958 Query: 143 aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 202 | ||||| || || ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 28285959 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 28286018 Query: 203 ccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggcggcccctcc 262 ||||||||||||||||| || || |||||||||||||| |||||| || || |||||| Sbjct: 28286019 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 28286078 Query: 263 ctggagttgacgaggcgcttggagatgttctccacgccgatctcgccgacccacttgcgc 322 || ||||| || || | |||| ||||||||||| || | || |||||||||||| Sbjct: 28286079 ctcgagttcaccagcctcttgccaatgttctccacacccgtgtccgacacccacttgcgc 28286138 Query: 323 acctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaa 363 |||||||||||||| || || || || || ||||||||||| Sbjct: 28286139 acctcgtcgtcgtaaacacgggcacgaagagcgccgaagaa 28286179 Score = 135 bits (68), Expect = 2e-28 Identities = 92/100 (92%) Strand = Plus / Plus Query: 411 cgtccgggacgttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgcggg 470 |||| ||||| |||||| |||||||||||||| |||||||||| |||||||||||||||| Sbjct: 28290023 cgtcggggaccttgtcgctgcggaagatgcccctgcacacgccaatgcggtcctcgcggg 28290082 Query: 471 tgggcgcccagtagaacttctccatgcgcccgtcacggat 510 |||| |||||||||||||| |||||||||||||| ||||| Sbjct: 28290083 tgggagcccagtagaacttgtccatgcgcccgtcgcggat 28290122 Score = 109 bits (55), Expect = 1e-20 Identities = 104/120 (86%), Gaps = 4/120 (3%) Strand = Plus / Plus Query: 125 ccgagcgccgcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgc 184 |||||||||||||||||||||||||| ||||||||| |||| | |||||||||||||||| Sbjct: 28289774 ccgagcgccgcctcgctgaggtacttatcggcgagccgcaccctcttgacgttctcctgc 28289833 Query: 185 tcctggaccagcatgt----ggccgtactccatgagcttctctatggtcatcttgggctg 240 ||| |||||||||| | ||||||||||| ||||| || || |||||||||||||| Sbjct: 28289834 tccctcaccagcatgtgccggcccgtactccatcagcttgtcgatcgtcatcttgggctg 28289893 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 286 gatgttctccacgccgatctcgccgacccacttgcgcacctcgtcgtcgtacacccgtgc 345 |||||||||||| |||||||| | |||||| |||||||||||| |||||||||| || Sbjct: 28289932 gatgttctccaccccgatctccgccacccaccgccgcacctcgtcgccgtacacccgcgc 28289991 Query: 346 ccgcagcgcgccgaagaagtcgatgg 371 ||||||||| |||||||||||||||| Sbjct: 28289992 ccgcagcgccccgaagaagtcgatgg 28290017 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 530 gagaagtcgttgccggtgacgatgatggg 558 ||||||||||||||||||||||||||||| Sbjct: 28290129 gagaagtcgttgccggtgacgatgatggg 28290157
>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 Score = 337 bits (170), Expect = 3e-89 Identities = 317/366 (86%) Strand = Plus / Minus Query: 307 gccgacccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtc 366 ||||||||||||||||||||| |||||||||||||| || ||||| || ||||| ||||| Sbjct: 1197 gccgacccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtc 1138 Query: 367 gatggactgccccgggaaggtgtccaccagcctcaccacggcctcgtccgggacgttgtc 426 ||||| || || ||||||||||| || | | | || || | |||||| ||| ||||| Sbjct: 1137 aatggattgtcctgggaaggtgtcgacgatctttacgacagactcgtcacagacattgtc 1078 Query: 427 ggtgcggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaa 486 ||| ||||||| |||||||| || ||||| ||||| || |||||||| ||||||||||| Sbjct: 1077 ggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaa 1018 Query: 487 cttctccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaagtcgttgccggt 546 ||||||||| || || ||||||||||| |||||||| ||||||||||| ||||| ||||| Sbjct: 1017 cttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggt 958 Query: 547 gacgatgatgggcacgcgggggttctcctccttgttgtacatccccgggagctgcacgtt 606 ||||| ||||||||| |||||||||||| |||||||||||| || |||||||||||||| Sbjct: 957 gacgacgatgggcacacgggggttctccctcttgttgtacatgccagggagctgcacgtt 898 Query: 607 ggtgggcgcgtccgcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgta 666 |||||| || || |||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 897 ggtgggggcatcggcgatgttcatcagggtggcgttcaccatctggttgttgacggtgta 838 Query: 667 ctgcgt 672 |||||| Sbjct: 837 ctgcgt 832 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 158 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 217 ||||||||||||||||| || |||||||||||||| |||||||| |||||||| | ||| Sbjct: 1346 agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 1287 Query: 218 ttctctatggtcatcttgggctggtcgaa 246 ||||| | |||||||| ||||| ||||| Sbjct: 1286 ttctcgactgtcatctttggctgctcgaa 1258
>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end Length = 1394 Score = 337 bits (170), Expect = 3e-89 Identities = 317/366 (86%) Strand = Plus / Minus Query: 307 gccgacccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtc 366 ||||||||||||||||||||| |||||||||||||| || ||||| || ||||| ||||| Sbjct: 942 gccgacccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtc 883 Query: 367 gatggactgccccgggaaggtgtccaccagcctcaccacggcctcgtccgggacgttgtc 426 ||||| || || ||||||||||| || | | | || || | |||||| ||| ||||| Sbjct: 882 aatggattgtcctgggaaggtgtcgacgatctttacgacagactcgtcacagacattgtc 823 Query: 427 ggtgcggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaa 486 ||| ||||||| |||||||| || ||||| ||||| || |||||||| ||||||||||| Sbjct: 822 ggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaa 763 Query: 487 cttctccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaagtcgttgccggt 546 ||||||||| || || ||||||||||| |||||||| ||||||||||| ||||| ||||| Sbjct: 762 cttctccatacgaccatcacggatcagaggagcgtagagcgtcgagaaatcgttaccggt 703 Query: 547 gacgatgatgggcacgcgggggttctcctccttgttgtacatccccgggagctgcacgtt 606 ||||| ||||||||| |||||||||||| |||||||||||| || |||||||||||||| Sbjct: 702 gacgacgatgggcacacgggggttctccctcttgttgtacatgccagggagctgcacgtt 643 Query: 607 ggtgggcgcgtccgcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgta 666 |||||| || || |||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 642 ggtgggggcatcggcgatgttcatcagggtggcgttcaccatctggttgttgacggtgta 583 Query: 667 ctgcgt 672 |||||| Sbjct: 582 ctgcgt 577 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 158 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 217 ||||||||||||||||| || |||||||||||||| |||||||| |||||||| | ||| Sbjct: 1091 agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 1032 Query: 218 ttctctatggtcatcttgggctggtcgaa 246 ||||| | |||||||| ||||| ||||| Sbjct: 1031 ttctcgactgtcatctttggctgctcgaa 1003
>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA Length = 1643 Score = 335 bits (169), Expect = 1e-88 Identities = 319/369 (86%) Strand = Plus / Minus Query: 311 acccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatg 370 |||||||||||||||||||||||||||||||| || ||||| || ||||| ||||||||| Sbjct: 1113 acccacttgcgcacctcgtcgtcgtacacccgagcacgcagagcaccgaaaaagtcgatg 1054 Query: 371 gactgccccgggaaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtg 430 || || || ||||||||||| || | | | || |||| |||||| ||| |||||||| Sbjct: 1053 gattgtcctgggaaggtgtcgacgatcttgacgacggactcgtcgctgacattgtcggtc 994 Query: 431 cggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttc 490 ||||||| |||||||| || ||||| ||||| ||||||||||| ||||||||||||||| Sbjct: 993 tggaagatacccttgcagacaccgatacggtcgtcgcgggtgggagcccagtagaacttc 934 Query: 491 tccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaagtcgttgccggtgacg 550 ||||| || || ||||||||||| || ||||||| ||||||||| ||||| || |||||| Sbjct: 933 tccatacgaccatcacggatcagaggggcgtacaacgtcgagaaatcgttaccagtgacg 874 Query: 551 atgatgggcacgcgggggttctcctccttgttgtacatccccgggagctgcacgttggtg 610 | ||||||||| || ||||||||||||||||||||||| || ||||||||||| |||||| Sbjct: 873 acgatgggcacacgtgggttctcctccttgttgtacatgcctgggagctgcacattggtg 814 Query: 611 ggcgcgtccgcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactgc 670 || || || ||||||||||| |||||||||||||||||||||||||| || |||||||| Sbjct: 813 ggggcatcggcgatgttcatgagggtggcgttcaccatctggttgttgacggtgtactgt 754 Query: 671 gtcgtcccg 679 || |||||| Sbjct: 753 gtggtcccg 745 Score = 77.8 bits (39), Expect = 4e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 158 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 217 ||||||||||||||||| || |||||||||||||| |||||||| |||||||| | ||| Sbjct: 1266 agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 1207 Query: 218 ttctctatggtcatcttgggctg 240 ||||| | |||||||| ||||| Sbjct: 1206 ttctccactgtcatctttggctg 1184
>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds Length = 1436 Score = 281 bits (142), Expect = 1e-72 Identities = 316/374 (84%) Strand = Plus / Minus Query: 296 acgccgatctcgccgacccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcg 355 |||||||| ||| | | |||||| | ||||||||||||||| |||| |||| ||| || Sbjct: 790 acgccgatttcggcaatccacttcctcacctcgtcgtcgtagaccctcgccctcagtgca 731 Query: 356 ccgaagaagtcgatggactgccccgggaaggtgtccaccagcctcaccacggcctcgtcc 415 ||||||||||| ||||| || || ||||||||||| || ||| | | || |||| | Sbjct: 730 ccgaagaagtcaatggattggccggggaaggtgtcgacgagcttgatgacatcctccttg 671 Query: 416 gggacgttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggc 475 ||||||||||||| | |||||| || |||| ||||||| ||||| || | |||||| Sbjct: 670 gggacgttgtcggacctgaagataccggtgcagacgccgacccggtcatccctggtggga 611 Query: 476 gcccagtagaacttctccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaag 535 |||||||||||||||||||| || ||||||||||| ||||| ||||| || || |||||| Sbjct: 610 gcccagtagaacttctccatacgaccgtcacggatgaggggggcgtagagggtggagaag 551 Query: 536 tcgttgccggtgacgatgatgggcacgcgggggttctcctccttgttgtacatccccggg 595 |||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||| Sbjct: 550 tcgttgccggtgacgatgatgggcacgcgggggttctcctgcttgttgtacatgccgggg 491 Query: 596 agctgcacgttggtgggcgcgtccgcgatgttcatcagggtggcgttcaccatctggttg 655 ||||| ||||||||||| ||| ||||||||||| |||||||||||||||||||||||| Sbjct: 490 agctggacgttggtggggttgtcggcgatgttcatgagggtggcgttcaccatctggttg 431 Query: 656 ttcaccgtgtactg 669 || || |||||||| Sbjct: 430 ttgacggtgtactg 417 Score = 137 bits (69), Expect = 5e-29 Identities = 114/129 (88%) Strand = Plus / Minus Query: 134 gcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggacc 193 |||||||| |||||||||||||| |||||||| | ||| ||||||||||||||||| ||| Sbjct: 952 gcctcgctcaggtacttgtcggccagctgcaccctcttcacgttctcctgctcctgcacc 893 Query: 194 agcatgtggccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggc 253 ||||||| ||||||||||| ||||| || | ||||||||||||||| ||||||| ||| Sbjct: 892 agcatgttgccgtactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggc 833 Query: 254 ggcccctcc 262 ||||||||| Sbjct: 832 ggcccctcc 824
>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds Length = 1597 Score = 281 bits (142), Expect = 1e-72 Identities = 316/374 (84%) Strand = Plus / Minus Query: 296 acgccgatctcgccgacccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcg 355 |||||||| ||| | | |||||| | ||||||||||||||| |||| |||| ||| || Sbjct: 984 acgccgatttcggcaatccacttcctcacctcgtcgtcgtagaccctcgccctcagtgca 925 Query: 356 ccgaagaagtcgatggactgccccgggaaggtgtccaccagcctcaccacggcctcgtcc 415 ||||||||||| ||||| || || ||||||||||| || ||| | | || |||| | Sbjct: 924 ccgaagaagtcaatggattggccggggaaggtgtcgacgagcttgatgacatcctccttg 865 Query: 416 gggacgttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggc 475 ||||||||||||| | |||||| || |||| ||||||| ||||| || | |||||| Sbjct: 864 gggacgttgtcggacctgaagataccggtgcagacgccgacccggtcatccctggtggga 805 Query: 476 gcccagtagaacttctccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaag 535 |||||||||||||||||||| || ||||||||||| ||||| ||||| || || |||||| Sbjct: 804 gcccagtagaacttctccatacgaccgtcacggatgaggggggcgtagagggtggagaag 745 Query: 536 tcgttgccggtgacgatgatgggcacgcgggggttctcctccttgttgtacatccccggg 595 |||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||| Sbjct: 744 tcgttgccggtgacgatgatgggcacgcgggggttctcctgcttgttgtacatgccgggg 685 Query: 596 agctgcacgttggtgggcgcgtccgcgatgttcatcagggtggcgttcaccatctggttg 655 ||||| ||||||||||| ||| ||||||||||| |||||||||||||||||||||||| Sbjct: 684 agctggacgttggtggggttgtcggcgatgttcatgagggtggcgttcaccatctggttg 625 Query: 656 ttcaccgtgtactg 669 || || |||||||| Sbjct: 624 ttgacggtgtactg 611 Score = 137 bits (69), Expect = 5e-29 Identities = 114/129 (88%) Strand = Plus / Minus Query: 134 gcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggacc 193 |||||||| |||||||||||||| |||||||| | ||| ||||||||||||||||| ||| Sbjct: 1146 gcctcgctcaggtacttgtcggccagctgcaccctcttcacgttctcctgctcctgcacc 1087 Query: 194 agcatgtggccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggc 253 ||||||| ||||||||||| ||||| || | ||||||||||||||| ||||||| ||| Sbjct: 1086 agcatgttgccgtactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggc 1027 Query: 254 ggcccctcc 262 ||||||||| Sbjct: 1026 ggcccctcc 1018
>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds Length = 1674 Score = 274 bits (138), Expect = 4e-70 Identities = 315/374 (84%) Strand = Plus / Minus Query: 296 acgccgatctcgccgacccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcg 355 |||||||| ||| | | |||||| | ||||||||||||||| |||| |||| ||| || Sbjct: 1091 acgccgatttcggcaatccacttcctcacctcgtcgtcgtagaccctcgccctcagtgca 1032 Query: 356 ccgaagaagtcgatggactgccccgggaaggtgtccaccagcctcaccacggcctcgtcc 415 ||||||||||| ||||| || || ||||||||||| || ||| | | || |||| | Sbjct: 1031 ccgaagaagtcaatggattggccggggaaggtgtcgacgagcttgatgacatcctccttg 972 Query: 416 gggacgttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggc 475 ||||||||||||| | |||||| || |||| ||||||| ||||| || | |||||| Sbjct: 971 gggacgttgtcggacctgaagataccggtgcagacgccgacccggtcatccctggtggga 912 Query: 476 gcccagtagaacttctccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaag 535 |||||||||||||||||||| || ||||||||||| ||||| ||||| || || |||||| Sbjct: 911 gcccagtagaacttctccatacgaccgtcacggatgaggggggcgtagagggtggagaag 852 Query: 536 tcgttgccggtgacgatgatgggcacgcgggggttctcctccttgttgtacatccccggg 595 |||||||||||||||||||||||||||||||||||||| | |||||||||||| || ||| Sbjct: 851 tcgttgccggtgacgatgatgggcacgcgggggttctcttgcttgttgtacatgccgggg 792 Query: 596 agctgcacgttggtgggcgcgtccgcgatgttcatcagggtggcgttcaccatctggttg 655 ||||| ||||||||||| ||| ||||||||||| |||||||||||||||||||||||| Sbjct: 791 agctggacgttggtggggttgtcggcgatgttcatgagggtggcgttcaccatctggttg 732 Query: 656 ttcaccgtgtactg 669 || || |||||||| Sbjct: 731 ttgacggtgtactg 718 Score = 121 bits (61), Expect = 3e-24 Identities = 112/129 (86%) Strand = Plus / Minus Query: 134 gcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggacc 193 |||||||| |||||||||||||| |||||||| | ||| ||||||||||| ||||| ||| Sbjct: 1253 gcctcgctcaggtacttgtcggccagctgcaccctcttcacgttctcctgttcctgcacc 1194 Query: 194 agcatgtggccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggc 253 ||||| | ||||||||||| ||||| || | ||||||||||||||| ||||||| ||| Sbjct: 1193 agcatattgccgtactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggc 1134 Query: 254 ggcccctcc 262 ||||||||| Sbjct: 1133 ggcccctcc 1125
>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds Length = 1494 Score = 274 bits (138), Expect = 4e-70 Identities = 315/374 (84%) Strand = Plus / Minus Query: 296 acgccgatctcgccgacccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcg 355 |||||||| ||| | | |||||| | ||||||||||||||| |||| |||| ||| || Sbjct: 954 acgccgatttcggcaatccacttcctcacctcgtcgtcgtagaccctcgccctcagtgca 895 Query: 356 ccgaagaagtcgatggactgccccgggaaggtgtccaccagcctcaccacggcctcgtcc 415 ||||||||||| ||||| || || ||||||||||| || ||| | | || |||| | Sbjct: 894 ccgaagaagtcaatggattggccggggaaggtgtcgacgagcttgatgacatcctccttg 835 Query: 416 gggacgttgtcggtgcggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggc 475 ||||||||||||| | |||||| || |||| ||||||| ||||| || | |||||| Sbjct: 834 gggacgttgtcggacctgaagataccggtgcagacgccgacccggtcatccctggtggga 775 Query: 476 gcccagtagaacttctccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaag 535 |||||||||||||||||||| || ||||||||||| ||||| ||||| || || |||||| Sbjct: 774 gcccagtagaacttctccatacgaccgtcacggatgaggggggcgtagagggtggagaag 715 Query: 536 tcgttgccggtgacgatgatgggcacgcgggggttctcctccttgttgtacatccccggg 595 |||||||||||||||||||||||||||||||||||||| | |||||||||||| || ||| Sbjct: 714 tcgttgccggtgacgatgatgggcacgcgggggttctcttgcttgttgtacatgccgggg 655 Query: 596 agctgcacgttggtgggcgcgtccgcgatgttcatcagggtggcgttcaccatctggttg 655 ||||| ||||||||||| ||| ||||||||||| |||||||||||||||||||||||| Sbjct: 654 agctggacgttggtggggttgtcggcgatgttcatgagggtggcgttcaccatctggttg 595 Query: 656 ttcaccgtgtactg 669 || || |||||||| Sbjct: 594 ttgacggtgtactg 581 Score = 121 bits (61), Expect = 3e-24 Identities = 112/129 (86%) Strand = Plus / Minus Query: 134 gcctcgctgaggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggacc 193 |||||||| |||||||||||||| |||||||| | ||| ||||||||||| ||||| ||| Sbjct: 1116 gcctcgctcaggtacttgtcggccagctgcaccctcttcacgttctcctgttcctgcacc 1057 Query: 194 agcatgtggccgtactccatgagcttctctatggtcatcttgggctggtcgaacgtgggc 253 ||||| | ||||||||||| ||||| || | ||||||||||||||| ||||||| ||| Sbjct: 1056 agcatattgccgtactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggc 997 Query: 254 ggcccctcc 262 ||||||||| Sbjct: 996 ggcccctcc 988
>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase activase mRNA, complete cds Length = 1693 Score = 218 bits (110), Expect = 2e-53 Identities = 206/238 (86%) Strand = Plus / Minus Query: 432 ggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttct 491 ||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 930 ggaagatgcccatgcacacgccgatgcggtcctcgcgggtggggttccagtagtacttct 871 Query: 492 ccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaagtcgttgccggtgacga 551 ||||||| || || ||||||||||| |||||||| || |||||||||||||| ||| | Sbjct: 870 ccatgcggccatcgcggatcaggggcgcgtacagggtggagaagtcgttgcccgtgcaca 811 Query: 552 tgatgggcacgcgggggttctcctccttgttgtacatccccgggagctgcacgttggtgg 611 ||||||||||| ||| ||||||| || ||||||| || || ||||| |||||||| | Sbjct: 810 caatgggcacgcgagggatctcctcgttcttgtacacaccgggcagctggacgttggtcg 751 Query: 612 gcgcgtccgcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactg 669 | ||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 750 ggttgtcggcgatgttcatcagggtggcgttcaccatctggttgttcacggtgtactg 693 Score = 87.7 bits (44), Expect = 4e-14 Identities = 74/84 (88%) Strand = Plus / Minus Query: 313 ccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatgga 372 ||||| ||||||| |||||||||||| || || ||||| |||||||||||||| ||||| Sbjct: 1049 ccactggcgcaccatgtcgtcgtacacgcgggcacgcagggcgccgaagaagtcaatgga 990 Query: 373 ctgccccgggaaggtgtccaccag 396 ||| || ||||||||||||||||| Sbjct: 989 ctggccggggaaggtgtccaccag 966 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 152 tcggcgagctgcacacgcttgacgttctcctgctc 186 ||||| |||||||| |||||||||||||||||||| Sbjct: 1207 tcggccagctgcacgcgcttgacgttctcctgctc 1173
>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase precursor RNA, partial cds; nuclear gene for chloroplast product Length = 850 Score = 212 bits (107), Expect = 1e-51 Identities = 224/263 (85%) Strand = Plus / Minus Query: 311 acccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatg 370 |||||||||||||||||||||||||||||||| || ||||| || ||||| ||||||||| Sbjct: 263 acccacttgcgcacctcgtcgtcgtacacccgagcacgcagagcaccgaaaaagtcgatg 204 Query: 371 gactgccccgggaaggtgtccaccagcctcaccacggcctcgtccgggacgttgtcggtg 430 || || || ||||||||||| || | | | || |||| |||||| ||| |||||||| Sbjct: 203 gattgtcctgggaaggtgtcgacgatcttgacgacggactcgtcgctgacattgtcggtc 144 Query: 431 cggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttc 490 ||||||| |||||||| || ||||| ||||| ||||||||||| ||||||||||||||| Sbjct: 143 tggaagatacccttgcagacaccgatacggtcgtcgcgggtgggagcccagtagaacttc 84 Query: 491 tccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaagtcgttgccggtgacg 550 ||||| || || ||||||||||| || ||||||| ||||||||| ||||| || |||||| Sbjct: 83 tccatacgaccatcacggatcagaggggcgtacaacgtcgagaaatcgttaccagtgacg 24 Query: 551 atgatgggcacgcgggggttctc 573 | ||||||||| || |||||||| Sbjct: 23 acgatgggcacacgtgggttctc 1 Score = 77.8 bits (39), Expect = 4e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 158 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 217 ||||||||||||||||| || |||||||||||||| |||||||| |||||||| | ||| Sbjct: 416 agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 357 Query: 218 ttctctatggtcatcttgggctg 240 ||||| | |||||||| ||||| Sbjct: 356 ttctccactgtcatctttggctg 334
>gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, complete cds Length = 1809 Score = 180 bits (91), Expect = 4e-42 Identities = 184/215 (85%) Strand = Plus / Minus Query: 452 ccgatgcggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacggatc 511 ||||| |||||||| |||||||| |||||||||||||||||||| || || |||||||| Sbjct: 1065 ccgatacggtcctcacgggtgggagcccagtagaacttctccatacgaccatcacggata 1006 Query: 512 aggggagcgtacagcgtcgagaagtcgttgccggtgacgatgatgggcacgcgggggttc 571 ||||||||||||| || ||||||||||| || |||||||| ||||| || |||| |||| Sbjct: 1005 aggggagcgtacaaggtggagaagtcgttaccagtgacgataatgggaacacgggcgttc 946 Query: 572 tcctccttgttgtacatccccgggagctgcacgttggtgggcgcgtccgcgatgttcatc 631 || | |||||||||||| || ||||| || || |||||||| ||| || |||||||| Sbjct: 945 tcttgcttgttgtacataccagggagttggacattggtggggttgtcagcaatgttcatg 886 Query: 632 agggtggcgttcaccatctggttgttcaccgtgta 666 ||||||||||| ||||||||||||||||| ||||| Sbjct: 885 agggtggcgttaaccatctggttgttcacggtgta 851
>gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase 1 mRNA, complete cds Length = 1559 Score = 178 bits (90), Expect = 2e-41 Identities = 171/198 (86%) Strand = Plus / Minus Query: 469 ggtgggcgcccagtagaacttctccatgcgcccgtcacggatcaggggagcgtacagcgt 528 |||||| |||||||| ||||||||||| || ||||||||||| || || ||||||||||| Sbjct: 993 ggtgggtgcccagtaaaacttctccatacgaccgtcacggatgagcggcgcgtacagcgt 934 Query: 529 cgagaagtcgttgccggtgacgatgatgggcacgcgggggttctcctccttgttgtacat 588 |||||| ||||| |||||||| ||||| || || || |||||||| |||||||||||||| Sbjct: 933 cgagaaatcgttaccggtgacaatgatcggaacacgagggttctcttccttgttgtacat 874 Query: 589 ccccgggagctgcacgttggtgggcgcgtccgcgatgttcatcagggtggcgttcaccat 648 || |||||||| ||||||||||| || ||||||||||| || |||||||||||||| Sbjct: 873 accggggagctgaacgttggtggggttatcagcgatgttcatgagtgtggcgttcaccat 814 Query: 649 ctggttgttcaccgtgta 666 ||||||||||| ||||| Sbjct: 813 ttggttgttcactgtgta 796
>gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase 2 mRNA, partial cds Length = 1462 Score = 157 bits (79), Expect = 6e-35 Identities = 163/191 (85%) Strand = Plus / Minus Query: 476 gcccagtagaacttctccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaag 535 |||||||| || |||||||| || ||||||||||| || ||||| ||||| || ||||| Sbjct: 801 gcccagtaaaatttctccatacgaccgtcacggatgagaggagcatacagtgtggagaaa 742 Query: 536 tcgttgccggtgacgatgatgggcacgcgggggttctcctccttgttgtacatccccggg 595 ||||| || |||||||||||||| || ||||||||||| |||||||||||||| || ||| Sbjct: 741 tcgttaccagtgacgatgatggggacacgggggttctcttccttgttgtacataccgggg 682 Query: 596 agctgcacgttggtgggcgcgtccgcgatgttcatcagggtggcgttcaccatctggttg 655 ||||| ||||||||||| || ||||||||||| ||||| ||||| |||||||||||| Sbjct: 681 agctggacgttggtggggttatcggcgatgttcatgagggtagcgttaaccatctggttg 622 Query: 656 ttcaccgtgta 666 || || ||||| Sbjct: 621 ttgacggtgta 611
>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase activase mRNA Length = 1853 Score = 157 bits (79), Expect = 6e-35 Identities = 172/203 (84%) Strand = Plus / Minus Query: 464 tcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacggatcaggggagcgtac 523 ||||||||||| |||||||||||||||||||| || ||||||||||| || ||||||||| Sbjct: 1014 tcgcgggtgggagcccagtagaacttctccatacgaccgtcacggatgagaggagcgtac 955 Query: 524 agcgtcgagaagtcgttgccggtgacgatgatgggcacgcgggggttctcctccttgttg 583 | || ||||| ||||| |||||||| ||||| || || ||||||||||||||||||||| Sbjct: 954 aatgttgagaaatcgttaccggtgacaatgattgggacacgggggttctcctccttgttg 895 Query: 584 tacatccccgggagctgcacgttggtgggcgcgtccgcgatgttcatcagggtggcgttc 643 ||||| || || ||||| ||||| || || || || |||||||| |||||||| ||| Sbjct: 894 tacatacctggaagctggacgtttgtcgggttatcagcaatgttcatgagggtggcattc 835 Query: 644 accatctggttgttcaccgtgta 666 ||||| |||||||| || ||||| Sbjct: 834 accatttggttgttgacagtgta 812
>gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA, complete cds; nuclear gene for chloroplast product Length = 1671 Score = 147 bits (74), Expect = 6e-32 Identities = 200/242 (82%) Strand = Plus / Minus Query: 425 tcggtgcggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtag 484 ||||||||||| || |||||||| || || | |||||| || | || || ||||||||| Sbjct: 1046 tcggtgcggaaaattcccttgcaaacaccaacgcggtcgtcccttgttggtgcccagtag 987 Query: 485 aacttctccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaagtcgttgccg 544 ||||||||||| ||||| ||||| || || ||||| |||||||| ||||| || || ||| Sbjct: 986 aacttctccatacgcccatcacgaatgagaggagcatacagcgttgagaaatcattaccg 927 Query: 545 gtgacgatgatgggcacgcgggggttctcctccttgttgtacatccccgggagctgcacg 604 ||||| ||||||||||| |||| |||||| |||||||||||||| || || |||||||| Sbjct: 926 gtgacaatgatgggcacacgggcgttctcttccttgttgtacataccaggaagctgcaca 867 Query: 605 ttggtgggcgcgtccgcgatgttcatcagggtggcgttcaccatctggttgttcaccgtg 664 || || || || || |||||||| || ||||| |||||||||||||||||||| ||| Sbjct: 866 tttgtagggttatcagcaatgttcatgagagtggcattcaccatctggttgttcacagtg 807 Query: 665 ta 666 || Sbjct: 806 ta 805
>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds Length = 4500 Score = 143 bits (72), Expect = 9e-31 Identities = 135/156 (86%) Strand = Plus / Minus Query: 432 ggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttct 491 ||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 2370 ggaagatgcccatgcacacgccgatgcggtcctcgcgggtggggttccagtagtacttct 2311 Query: 492 ccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaagtcgttgccggtgacga 551 ||||||| || || ||||||||||| |||||||| || |||||||||||||| ||| | Sbjct: 2310 ccatgcggccatcgcggatcaggggcgcgtacagggtggagaagtcgttgcccgtgcaca 2251 Query: 552 tgatgggcacgcgggggttctcctccttgttgtaca 587 ||||||||||| ||| ||||||| || ||||||| Sbjct: 2250 caatgggcacgcgagggatctcctcgttcttgtaca 2215 Score = 91.7 bits (46), Expect = 3e-15 Identities = 49/50 (98%) Strand = Plus / Minus Query: 620 gcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactg 669 ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1954 gcgatgttcatcagggtggcgttcaccatctggttgttcacggtgtactg 1905 Score = 87.7 bits (44), Expect = 4e-14 Identities = 74/84 (88%) Strand = Plus / Minus Query: 313 ccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatgga 372 ||||| ||||||| |||||||||||| || || ||||| |||||||||||||| ||||| Sbjct: 2739 ccactggcgcaccatgtcgtcgtacacgcgggcacgcagggcgccgaagaagtcaatgga 2680 Query: 373 ctgccccgggaaggtgtccaccag 396 ||| || ||||||||||||||||| Sbjct: 2679 ctggccggggaaggtgtccaccag 2656 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 152 tcggcgagctgcacacgcttgacgttctcctgctc 186 ||||| |||||||| |||||||||||||||||||| Sbjct: 3239 tcggccagctgcacgcgcttgacgttctcctgctc 3205
>gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase alpha 2 mRNA, complete cds Length = 1433 Score = 141 bits (71), Expect = 3e-30 Identities = 161/191 (84%) Strand = Plus / Minus Query: 476 gcccagtagaacttctccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaag 535 |||||||| || |||||||| || ||||||||||| || ||||| ||||| || ||||| Sbjct: 800 gcccagtaaaatttctccatacgaccgtcacggatgagaggagcatacagtgtggagaaa 741 Query: 536 tcgttgccggtgacgatgatgggcacgcgggggttctcctccttgttgtacatccccggg 595 ||||| || |||||||| ||||| || ||||||||||| |||||||||||||| || ||| Sbjct: 740 tcgttaccagtgacgataatggggacacgggggttctcttccttgttgtacataccgggg 681 Query: 596 agctgcacgttggtgggcgcgtccgcgatgttcatcagggtggcgttcaccatctggttg 655 ||||| ||||||||||| || ||||||||||| ||||| || || |||||||||||| Sbjct: 680 agctggacgttggtggggttatcggcgatgttcatgagggtagcattaaccatctggttg 621 Query: 656 ttcaccgtgta 666 || || ||||| Sbjct: 620 ttgacggtgta 610 Score = 42.1 bits (21), Expect = 2.3 Identities = 54/65 (83%) Strand = Plus / Minus Query: 326 tcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtcgatggactgccccgggaag 385 ||||| ||||| ||||| |||| || || |||||||| |||||||| || || |||||| Sbjct: 950 tcgtcatcgtaaacccgagccctcaaggcaccgaagaaatcgatggattggccggggaag 891 Query: 386 gtgtc 390 ||||| Sbjct: 890 gtgtc 886
>gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precursor, gene, partial cds Length = 1216 Score = 139 bits (70), Expect = 1e-29 Identities = 166/198 (83%) Strand = Plus / Minus Query: 469 ggtgggcgcccagtagaacttctccatgcgcccgtcacggatcaggggagcgtacagcgt 528 |||||||||||||||||| |||||||| || || ||||| || || |||||||||| || Sbjct: 836 ggtgggcgcccagtagaatttctccatacgaccatcacgaatgagaggagcgtacaatgt 777 Query: 529 cgagaagtcgttgccggtgacgatgatgggcacgcgggggttctcctccttgttgtacat 588 ||||||||| || || ||||||||||| || || || || ||||| |||||||||||||| Sbjct: 776 cgagaagtcattacctgtgacgatgatcggtacacgtggattctcttccttgttgtacat 717 Query: 589 ccccgggagctgcacgttggtgggcgcgtccgcgatgttcatcagggtggcgttcaccat 648 ||||||||||| || ||||| || ||| || |||||||| ||||| || |||||||| Sbjct: 716 acccgggagctgaacattggttggattgtcagcaatgttcatgagggtagcattcaccat 657 Query: 649 ctggttgttcaccgtgta 666 ||||||||||| ||||| Sbjct: 656 ttggttgttcacagtgta 639
>gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precursor, mRNA, complete cds Length = 1634 Score = 139 bits (70), Expect = 1e-29 Identities = 166/198 (83%) Strand = Plus / Minus Query: 469 ggtgggcgcccagtagaacttctccatgcgcccgtcacggatcaggggagcgtacagcgt 528 |||||||||||||||||| |||||||| || || ||||| || || |||||||||| || Sbjct: 1009 ggtgggcgcccagtagaatttctccatacgaccatcacgaatgagaggagcgtacaatgt 950 Query: 529 cgagaagtcgttgccggtgacgatgatgggcacgcgggggttctcctccttgttgtacat 588 ||||||||| || || ||||||||||| || || || || ||||| |||||||||||||| Sbjct: 949 cgagaagtcattacctgtgacgatgatcggtacacgtggattctcttccttgttgtacat 890 Query: 589 ccccgggagctgcacgttggtgggcgcgtccgcgatgttcatcagggtggcgttcaccat 648 ||||||||||| || ||||| || ||| || |||||||| ||||| || |||||||| Sbjct: 889 acccgggagctgaacattggttggattgtcagcaatgttcatgagggtagcattcaccat 830 Query: 649 ctggttgttcaccgtgta 666 ||||||||||| ||||| Sbjct: 829 ttggttgttcacagtgta 812
>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1694 Score = 133 bits (67), Expect = 8e-28 Identities = 160/191 (83%) Strand = Plus / Minus Query: 476 gcccagtagaacttctccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaag 535 ||||||||||| || ||||| || || |||||||| || |||||||||| ||||||||| Sbjct: 986 gcccagtagaatttttccatacgaccatcacggataagaggagcgtacaatgtcgagaag 927 Query: 536 tcgttgccggtgacgatgatgggcacgcgggggttctcctccttgttgtacatccccggg 595 ||||| || ||||| ||||| ||||| || |||||||| |||||||||||||| || ||| Sbjct: 926 tcgttaccagtgacaatgataggcacacgagggttctcttccttgttgtacataccaggg 867 Query: 596 agctgcacgttggtgggcgcgtccgcgatgttcatcagggtggcgttcaccatctggttg 655 ||||| || || || || ||| || |||||||| |||||||| ||||||||||||||| Sbjct: 866 agctggacatttgttgggttgtcagcaatgttcatgagggtggcattcaccatctggttg 807 Query: 656 ttcaccgtgta 666 || || ||||| Sbjct: 806 ttaacagtgta 796
>emb|Y10657.1|CLRCAGENE C.littorale rca gene Length = 2513 Score = 131 bits (66), Expect = 3e-27 Identities = 195/238 (81%) Strand = Plus / Minus Query: 432 ggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttct 491 ||||||| ||| |||| ||||||||||||||||| |||||||| ||||||| |||||| Sbjct: 1859 ggaagattcccatgcagacgccgatgcggtcctcacgggtggggttccagtagtacttct 1800 Query: 492 ccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaagtcgttgccggtgacga 551 ||||||| ||||||||||| ||||| |||||||| || ||||| ||||| || ||| || Sbjct: 1799 ccatgcggccgtcacggatgaggggggcgtacagggtggagaaatcgttacccgtgcaga 1740 Query: 552 tgatgggcacgcgggggttctcctccttgttgtacatccccgggagctgcacgttggtgg 611 ||||| || ||||| ||| | ||| ||||||| || || |||||||||||||| | Sbjct: 1739 caatgggaacacggggaatctgcacctccttgtacacgccgggcagctgcacgttggtag 1680 Query: 612 gcgcgtccgcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactg 669 | || ||||||||||| ||||| ||||| |||||||||||||| || |||||||| Sbjct: 1679 ggttatcagcgatgttcatgagggtagcgttgaccatctggttgttgacagtgtactg 1622 Score = 48.1 bits (24), Expect = 0.038 Identities = 30/32 (93%) Strand = Plus / Minus Query: 155 gcgagctgcacacgcttgacgttctcctgctc 186 ||||||||||| |||||||| ||||||||||| Sbjct: 2136 gcgagctgcacgcgcttgacattctcctgctc 2105 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 356 ccgaagaagtcgatggactgccccgggaagg 386 |||||||||||||| |||||||| ||||||| Sbjct: 1935 ccgaagaagtcgatcgactgcccggggaagg 1905
>gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1) mRNA, complete cds Length = 1627 Score = 131 bits (66), Expect = 3e-27 Identities = 198/242 (81%) Strand = Plus / Minus Query: 425 tcggtgcggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtag 484 ||||| ||||| || |||||||| || || |||||||| || | || || ||||||||| Sbjct: 1042 tcggtccggaaaattcccttgcaaacaccaatgcggtcttcccttgttggtgcccagtag 983 Query: 485 aacttctccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaagtcgttgccg 544 ||||||||||| || || |||||||| || ||||| || || || ||||| ||||| || Sbjct: 982 aacttctccatacgaccatcacggatgagaggagcataaagtgttgagaaatcgttacca 923 Query: 545 gtgacgatgatgggcacgcgggggttctcctccttgttgtacatccccgggagctgcacg 604 ||||| ||||||||||| |||| ||| || |||||||||||||| || || |||||||| Sbjct: 922 gtgacaatgatgggcacacgggcgttatcttccttgttgtacataccaggaagctgcaca 863 Query: 605 ttggtgggcgcgtccgcgatgttcatcagggtggcgttcaccatctggttgttcaccgtg 664 || ||||| || || |||||||| || ||||| |||||||||||||||||||| ||| Sbjct: 862 tttgtggggttatcagcaatgttcatgagagtggcattcaccatctggttgttcacagtg 803 Query: 665 ta 666 || Sbjct: 802 ta 801
>ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.2 mRNA, complete cds Length = 1815 Score = 129 bits (65), Expect = 1e-26 Identities = 194/237 (81%) Strand = Plus / Minus Query: 433 gaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctc 492 |||||| |||||||| || ||||| ||||| || ||||| || ||||||||||||||||| Sbjct: 1134 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 1075 Query: 493 catgcgcccgtcacggatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgat 552 ||| || || |||||||| || |||||||| || || ||||| ||||| || ||| || Sbjct: 1074 catacgtccatcacggatgagaggagcgtatagggtggagaaatcgttaccagtgcaaat 1015 Query: 553 gatgggcacgcgggggttctcctccttgttgtacatccccgggagctgcacgttggtggg 612 |||||| || || | |||||| |||||||||||||| || |||||||| |||||||| || Sbjct: 1014 gatggggacacgtgcgttctcttccttgttgtacattcctgggagctggacgttggttgg 955 Query: 613 cgcgtccgcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactg 669 || || |||||||| || || ||||| |||||||||||||| || |||||||| Sbjct: 954 gttatcagcaatgttcatgagtgttgcgttaaccatctggttgttgacagtgtactg 898
>ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.3 mRNA, complete cds Length = 1928 Score = 129 bits (65), Expect = 1e-26 Identities = 194/237 (81%) Strand = Plus / Minus Query: 433 gaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctc 492 |||||| |||||||| || ||||| ||||| || ||||| || ||||||||||||||||| Sbjct: 1134 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 1075 Query: 493 catgcgcccgtcacggatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgat 552 ||| || || |||||||| || |||||||| || || ||||| ||||| || ||| || Sbjct: 1074 catacgtccatcacggatgagaggagcgtatagggtggagaaatcgttaccagtgcaaat 1015 Query: 553 gatgggcacgcgggggttctcctccttgttgtacatccccgggagctgcacgttggtggg 612 |||||| || || | |||||| |||||||||||||| || |||||||| |||||||| || Sbjct: 1014 gatggggacacgtgcgttctcttccttgttgtacattcctgggagctggacgttggttgg 955 Query: 613 cgcgtccgcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactg 669 || || |||||||| || || ||||| |||||||||||||| || |||||||| Sbjct: 954 gttatcagcaatgttcatgagtgttgcgttaaccatctggttgttgacagtgtactg 898
>ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.1 mRNA, complete cds Length = 1833 Score = 129 bits (65), Expect = 1e-26 Identities = 194/237 (81%) Strand = Plus / Minus Query: 433 gaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctc 492 |||||| |||||||| || ||||| ||||| || ||||| || ||||||||||||||||| Sbjct: 1163 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 1104 Query: 493 catgcgcccgtcacggatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgat 552 ||| || || |||||||| || |||||||| || || ||||| ||||| || ||| || Sbjct: 1103 catacgtccatcacggatgagaggagcgtatagggtggagaaatcgttaccagtgcaaat 1044 Query: 553 gatgggcacgcgggggttctcctccttgttgtacatccccgggagctgcacgttggtggg 612 |||||| || || | |||||| |||||||||||||| || |||||||| |||||||| || Sbjct: 1043 gatggggacacgtgcgttctcttccttgttgtacattcctgggagctggacgttggttgg 984 Query: 613 cgcgtccgcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactg 669 || || |||||||| || || ||||| |||||||||||||| || |||||||| Sbjct: 983 gttatcagcaatgttcatgagtgttgcgttaaccatctggttgttgacagtgtactg 927
>gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890) unknown protein (At2g39730) mRNA, complete cds Length = 1697 Score = 129 bits (65), Expect = 1e-26 Identities = 194/237 (81%) Strand = Plus / Minus Query: 433 gaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctc 492 |||||| |||||||| || ||||| ||||| || ||||| || ||||||||||||||||| Sbjct: 1045 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 986 Query: 493 catgcgcccgtcacggatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgat 552 ||| || || |||||||| || |||||||| || || ||||| ||||| || ||| || Sbjct: 985 catacgtccatcacggatgagaggagcgtatagggtggagaaatcgttaccagtgcaaat 926 Query: 553 gatgggcacgcgggggttctcctccttgttgtacatccccgggagctgcacgttggtggg 612 |||||| || || | |||||| |||||||||||||| || |||||||| |||||||| || Sbjct: 925 gatggggacacgtgcgttctcttccttgttgtacattcctgggagctggacgttggttgg 866 Query: 613 cgcgtccgcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactg 669 || || |||||||| || || ||||| |||||||||||||| || |||||||| Sbjct: 865 gttatcagcaatgttcatgagtgttgcgttaaccatctggttgttgacagtgtactg 809
>gb|BT000613.1| Arabidopsis thaliana Rubsico activase (At2g39730/T5I7.3) mRNA, complete cds Length = 1425 Score = 129 bits (65), Expect = 1e-26 Identities = 194/237 (81%) Strand = Plus / Minus Query: 433 gaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctc 492 |||||| |||||||| || ||||| ||||| || ||||| || ||||||||||||||||| Sbjct: 960 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 901 Query: 493 catgcgcccgtcacggatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgat 552 ||| || || |||||||| || |||||||| || || ||||| ||||| || ||| || Sbjct: 900 catacgtccatcacggatgagaggagcgtatagggtggagaaatcgttaccagtgcaaat 841 Query: 553 gatgggcacgcgggggttctcctccttgttgtacatccccgggagctgcacgttggtggg 612 |||||| || || | |||||| |||||||||||||| || |||||||| |||||||| || Sbjct: 840 gatggggacacgtgcgttctcttccttgttgtacattcctgggagctggacgttggttgg 781 Query: 613 cgcgtccgcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactg 669 || || |||||||| || || ||||| |||||||||||||| || |||||||| Sbjct: 780 gttatcagcaatgttcatgagtgttgcgttaaccatctggttgttgacagtgtactg 724
>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete sequence Length = 92624 Score = 129 bits (65), Expect = 1e-26 Identities = 194/237 (81%) Strand = Plus / Plus Query: 433 gaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctc 492 |||||| |||||||| || ||||| ||||| || ||||| || ||||||||||||||||| Sbjct: 14154 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 14213 Query: 493 catgcgcccgtcacggatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgat 552 ||| || || |||||||| || |||||||| || || ||||| ||||| || ||| || Sbjct: 14214 catacgtccatcacggatgagaggagcgtatagggtggagaaatcgttaccagtgcaaat 14273 Query: 553 gatgggcacgcgggggttctcctccttgttgtacatccccgggagctgcacgttggtggg 612 |||||| || || | |||||| |||||||||||||| || |||||||| |||||||| || Sbjct: 14274 gatggggacacgtgcgttctcttccttgttgtacattcctgggagctggacgttggttgg 14333 Query: 613 cgcgtccgcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactg 669 || || |||||||| || || ||||| |||||||||||||| || |||||||| Sbjct: 14334 gttatcagcaatgttcatgagtgttgcgttaaccatctggttgttgacagtgtactg 14390
>gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, complete cds Length = 1674 Score = 129 bits (65), Expect = 1e-26 Identities = 194/237 (81%) Strand = Plus / Minus Query: 433 gaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctc 492 |||||| |||||||| || ||||| ||||| || ||||| || ||||||||||||||||| Sbjct: 1048 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 989 Query: 493 catgcgcccgtcacggatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgat 552 ||| || || |||||||| || |||||||| || || ||||| ||||| || ||| || Sbjct: 988 catacgtccatcacggatgagaggagcgtatagggtggagaaatcgttaccagtgcaaat 929 Query: 553 gatgggcacgcgggggttctcctccttgttgtacatccccgggagctgcacgttggtggg 612 |||||| || || | |||||| |||||||||||||| || |||||||| |||||||| || Sbjct: 928 gatggggacacgtgcgttctcttccttgttgtacattcctgggagctggacgttggttgg 869 Query: 613 cgcgtccgcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactg 669 || || |||||||| || || ||||| |||||||||||||| || |||||||| Sbjct: 868 gttatcagcaatgttcatgagtgttgcgttaaccatctggttgttgacagtgtactg 812
>gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/oxygenase activase {alternatively spliced} [spinach, Genomic, 3691 nt] Length = 3691 Score = 129 bits (65), Expect = 1e-26 Identities = 173/209 (82%) Strand = Plus / Minus Query: 458 cggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacggatcagggga 517 |||||||| |||||||| |||||||||||||||||||| || || |||||||| |||||| Sbjct: 2801 cggtcctcacgggtgggagcccagtagaacttctccatacgaccatcacggataagggga 2742 Query: 518 gcgtacagcgtcgagaagtcgttgccggtgacgatgatgggcacgcgggggttctcctcc 577 ||||||| || ||||| ||||| || || || |||||||| || |||| || |||| | Sbjct: 2741 gcgtacaaggtggagaaatcgttaccagtaacaatgatggggacacgggcattgtcctgc 2682 Query: 578 ttgttgtacatccccgggagctgcacgttggtgggcgcgtccgcgatgttcatcagggtg 637 ||||||||||| || ||||| || || ||||| || ||| || |||||||| || ||| Sbjct: 2681 ttgttgtacataccagggagttggacattggttgggttgtcagcaatgttcatgagtgtg 2622 Query: 638 gcgttcaccatctggttgttcaccgtgta 666 ||||| |||||||||||||| || ||||| Sbjct: 2621 gcgttaaccatctggttgtttacggtgta 2593
>gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds Length = 1655 Score = 129 bits (65), Expect = 1e-26 Identities = 194/237 (81%) Strand = Plus / Minus Query: 433 gaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctc 492 |||||| |||||||| || ||||| ||||| || ||||| || ||||||||||||||||| Sbjct: 1045 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 986 Query: 493 catgcgcccgtcacggatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgat 552 ||| || || |||||||| || |||||||| || || ||||| ||||| || ||| || Sbjct: 985 catacgtccatcacggatgagaggagcgtatagggtggagaaatcgttaccagtgcaaat 926 Query: 553 gatgggcacgcgggggttctcctccttgttgtacatccccgggagctgcacgttggtggg 612 |||||| || || | |||||| |||||||||||||| || |||||||| |||||||| || Sbjct: 925 gatggggacacgtgcgttctcttccttgttgtacattcctgggagctggacgttggttgg 866 Query: 613 cgcgtccgcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactg 669 || || |||||||| || || ||||| |||||||||||||| || |||||||| Sbjct: 865 gttatcagcaatgttcatgagtgttgcgttaaccatctggttgttgacagtgtactg 809
>gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730/T5I7.3) mRNA, complete cds Length = 1674 Score = 129 bits (65), Expect = 1e-26 Identities = 194/237 (81%) Strand = Plus / Minus Query: 433 gaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctc 492 |||||| |||||||| || ||||| ||||| || ||||| || ||||||||||||||||| Sbjct: 1048 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 989 Query: 493 catgcgcccgtcacggatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgat 552 ||| || || |||||||| || |||||||| || || ||||| ||||| || ||| || Sbjct: 988 catacgtccatcacggatgagaggagcgtatagggtggagaaatcgttaccagtgcaaat 929 Query: 553 gatgggcacgcgggggttctcctccttgttgtacatccccgggagctgcacgttggtggg 612 |||||| || || | |||||| |||||||||||||| || |||||||| |||||||| || Sbjct: 928 gatggggacacgtgcgttctcttccttgttgtacattcctgggagctggacgttggttgg 869 Query: 613 cgcgtccgcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactg 669 || || |||||||| || || ||||| |||||||||||||| || |||||||| Sbjct: 868 gttatcagcaatgttcatgagtgttgcgttaaccatctggttgttgacagtgtactg 812
>gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphosphate carboxylase/oxygenase activase (rca) gene, complete cds Length = 3974 Score = 129 bits (65), Expect = 1e-26 Identities = 194/237 (81%) Strand = Plus / Minus Query: 433 gaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctc 492 |||||| |||||||| || ||||| ||||| || ||||| || ||||||||||||||||| Sbjct: 3129 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 3070 Query: 493 catgcgcccgtcacggatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgat 552 ||| || || |||||||| || |||||||| || || ||||| ||||| || ||| || Sbjct: 3069 catacgtccatcacggatgagaggagcgtatagggtggagaaatcgttaccagtgcaaat 3010 Query: 553 gatgggcacgcgggggttctcctccttgttgtacatccccgggagctgcacgttggtggg 612 |||||| || || | |||||| |||||||||||||| || |||||||| |||||||| || Sbjct: 3009 gatggggacacgtgcgttctcttccttgttgtacattcctgggagctggacgttggttgg 2950 Query: 613 cgcgtccgcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactg 669 || || |||||||| || || ||||| |||||||||||||| || |||||||| Sbjct: 2949 gttatcagcaatgttcatgagtgttgcgttaaccatctggttgttgacagtgtactg 2893
>gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds Length = 1693 Score = 121 bits (61), Expect = 3e-24 Identities = 193/237 (81%) Strand = Plus / Minus Query: 433 gaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctc 492 |||||| |||||||| || ||||| ||||| || ||||| || ||||||||||||||||| Sbjct: 1037 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 978 Query: 493 catgcgcccgtcacggatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgat 552 ||| || || |||||||| || |||||||| || || ||||| ||||| || ||| || Sbjct: 977 catacgtccatcacggatgagaggagcgtatagggtggagaaatcgttaccagtgcaaat 918 Query: 553 gatgggcacgcgggggttctcctccttgttgtacatccccgggagctgcacgttggtggg 612 |||||| || || | |||||| |||||||||||||| || || ||||| |||||||| || Sbjct: 917 gatggggacacgtgcgttctcttccttgttgtacattcctggaagctggacgttggttgg 858 Query: 613 cgcgtccgcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactg 669 || || |||||||| || || ||||| |||||||||||||| || |||||||| Sbjct: 857 gttatcagcaatgttcatgagtgttgcgttaaccatctggttgttgacagtgtactg 801
>gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete sequence Length = 1787 Score = 121 bits (61), Expect = 3e-24 Identities = 193/237 (81%) Strand = Plus / Minus Query: 433 gaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctc 492 |||||| |||||||| || ||||| ||||| || ||||| || ||||||||||||||||| Sbjct: 1163 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 1104 Query: 493 catgcgcccgtcacggatcaggggagcgtacagcgtcgagaagtcgttgccggtgacgat 552 ||| || || |||||||| || |||||||| || || ||||| ||||| || ||| || Sbjct: 1103 catacgtccatcacggatgagaggagcgtatagggtggagaaatcgttaccagtgcaaat 1044 Query: 553 gatgggcacgcgggggttctcctccttgttgtacatccccgggagctgcacgttggtggg 612 |||||| || || | |||||| |||||||||||||| || |||||||| |||||||| || Sbjct: 1043 gatggggacacgtgcgttctcttccttgttgtacattcctgggagctggacgttggttgg 984 Query: 613 cgcgtccgcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactg 669 || || |||||||| || || ||||| |||||||| ||||| || |||||||| Sbjct: 983 gttatcagcaatgttcatgagtgttgcgttaaccatctgattgttgacagtgtactg 927
>gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds Length = 1832 Score = 121 bits (61), Expect = 3e-24 Identities = 172/209 (82%) Strand = Plus / Minus Query: 458 cggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacggatcagggga 517 |||||||| |||||||| |||||||||||||||||||| || || |||||||| |||||| Sbjct: 1173 cggtcctcacgggtgggagcccagtagaacttctccatacgaccatcacggataagggga 1114 Query: 518 gcgtacagcgtcgagaagtcgttgccggtgacgatgatgggcacgcgggggttctcctcc 577 ||||||| || ||||| ||||| || || || |||||||| || |||| || |||| | Sbjct: 1113 gcgtacaaggtggagaaatcgttaccagtaacaatgatggggacacgggcattgtcctgc 1054 Query: 578 ttgttgtacatccccgggagctgcacgttggtgggcgcgtccgcgatgttcatcagggtg 637 ||||||||||| || ||||| || || ||||| || ||| || ||||||| || ||| Sbjct: 1053 ttgttgtacataccagggagttggacattggttgggttgtcagcaatgttcaggagtgtg 994 Query: 638 gcgttcaccatctggttgttcaccgtgta 666 ||||| |||||||||||||| || ||||| Sbjct: 993 gcgttaaccatctggttgtttacggtgta 965
>gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bisphosphate carboxylase activase (Rca) gene, partial sequence Length = 648 Score = 119 bits (60), Expect = 1e-23 Identities = 165/200 (82%) Strand = Plus / Minus Query: 458 cggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacggatcagggga 517 |||||||| || ||||| ||||||||||| |||||||| || || |||||||| || ||| Sbjct: 208 cggtcctcacgagtgggtgcccagtagaatttctccatacgaccatcacggatgagagga 149 Query: 518 gcgtacagcgtcgagaagtcgttgccggtgacgatgatgggcacgcgggggttctcctcc 577 || |||| || ||||||||||| || || ||||||||||| || || | || |||| | Sbjct: 148 gcatacaaggtagagaagtcgttaccagtaacgatgatgggtacacgagcattgtcctgc 89 Query: 578 ttgttgtacatccccgggagctgcacgttggtgggcgcgtccgcgatgttcatcagggtg 637 ||||||||||| || |||||||| || ||||| || ||| || |||||||| |||||| Sbjct: 88 ttgttgtacataccagggagctggacattggttgggttgtcagcaatgttcatgagggtg 29 Query: 638 gcgttcaccatctggttgtt 657 ||||| |||||||||||||| Sbjct: 28 gcgttaaccatctggttgtt 9
>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1724 Score = 113 bits (57), Expect = 8e-22 Identities = 171/209 (81%) Strand = Plus / Minus Query: 458 cggtcctcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacggatcagggga 517 |||||||| | |||||| ||||||||||| |||||||| || || |||||||| || || Sbjct: 1004 cggtcctccctggtgggtgcccagtagaatttctccatacggccatcacggataagaggg 945 Query: 518 gcgtacagcgtcgagaagtcgttgccggtgacgatgatgggcacgcgggggttctcctcc 577 || |||| || ||||||||||| || ||||| |||||||| || || |||||||| ||| Sbjct: 944 gcatacaatgttgagaagtcgttaccagtgacaatgatgggaacacgagggttctcttcc 885 Query: 578 ttgttgtacatccccgggagctgcacgttggtgggcgcgtccgcgatgttcatcagggtg 637 ||||||||||| || || ||||| || || || || ||| || |||||||| |||||| Sbjct: 884 ttgttgtacatgccaggaagctggacatttgttgggttgtcagctatgttcatgagggtg 825 Query: 638 gcgttcaccatctggttgttcaccgtgta 666 || ||||||||||| ||||| || ||||| Sbjct: 824 gcattcaccatctgattgttaacagtgta 796 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 169 cttgacgttctcctgctcctggaccagcatgtggccgtactccatgagcttctctatggt 228 |||||||||||||||||||||||| |||||| ||||| | | |||||| || || || Sbjct: 1293 cttgacgttctcctgctcctggacaagcatgcctccgtagccaaggagcttatcaattgt 1234 Query: 229 catcttgggctg 240 |||||||||||| Sbjct: 1233 catcttgggctg 1222
>gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase mRNA, complete cds Length = 1656 Score = 109 bits (55), Expect = 1e-20 Identities = 157/191 (82%) Strand = Plus / Minus Query: 476 gcccagtagaacttctccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaag 535 |||||||||||||||||||| || || |||||||| || ||||| |||| || |||||| Sbjct: 963 gcccagtagaacttctccatacgaccatcacggataagaggagcatacaatgtggagaag 904 Query: 536 tcgttgccggtgacgatgatgggcacgcgggggttctcctccttgttgtacatccccggg 595 ||||| || ||||| || ||||| || | || |||||| | |||||||||||| || ||| Sbjct: 903 tcgttaccagtgacaataatgggtaccctggcgttctcttgcttgttgtacataccgggg 844 Query: 596 agctgcacgttggtgggcgcgtccgcgatgttcatcagggtggcgttcaccatctggttg 655 ||||| || || || || ||| || |||||||| |||||||| ||||||||||||||| Sbjct: 843 agctggacatttgttgggttgtcagcaatgttcatgagggtggcattcaccatctggttg 784 Query: 656 ttcaccgtgta 666 || || ||||| Sbjct: 783 ttgacggtgta 773
>gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate carboxylase/oxygenase activase pseudogene, partial sequence Length = 472 Score = 99.6 bits (50), Expect = 1e-17 Identities = 104/122 (85%) Strand = Plus / Minus Query: 476 gcccagtagaacttctccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaag 535 |||||||||||||| ||||| || || || ||||| |||||||| || || | ||||| Sbjct: 416 gcccagtagaacttttccatacgaccatcgcggataaggggagcatatagtgctgagaaa 357 Query: 536 tcgttgccggtgacgatgatgggcacgcgggggttctcctccttgttgtacatccccggg 595 ||||| || ||||||||||||||||| ||||||||||||||||||| |||||| || ||| Sbjct: 356 tcgtttcctgtgacgatgatgggcacacgggggttctcctccttgtcgtacattccaggg 297 Query: 596 ag 597 || Sbjct: 296 ag 295
>gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, partial cds Length = 1063 Score = 93.7 bits (47), Expect = 7e-16 Identities = 155/191 (81%) Strand = Plus / Minus Query: 476 gcccagtagaacttctccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaag 535 |||||||||||||||||||| || || |||||||| || ||||| || || || ||||| Sbjct: 424 gcccagtagaacttctccatacgaccatcacggatgagaggagcataaagtgttgagaaa 365 Query: 536 tcgttgccggtgacgatgatgggcacgcgggggttctcctccttgttgtacatccccggg 595 || || |||||||| ||||||||||| || | || || |||||||||||||| || ||| Sbjct: 364 tcattaccggtgacaatgatgggcacacgagcattgtcttccttgttgtacataccaggg 305 Query: 596 agctgcacgttggtgggcgcgtccgcgatgttcatcagggtggcgttcaccatctggttg 655 || || || |||||||| || || |||||||| || ||||| |||||||| |||||| Sbjct: 304 agttggacattggtggggttatcagcaatgttcatgagtgtggcattcaccatttggttg 245 Query: 656 ttcaccgtgta 666 || || ||||| Sbjct: 244 ttgacagtgta 234
>gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence Length = 253 Score = 93.7 bits (47), Expect = 7e-16 Identities = 104/123 (84%) Strand = Plus / Minus Query: 464 tcgcgggtgggcgcccagtagaacttctccatgcgcccgtcacggatcaggggagcgtac 523 |||||||| || ||||||||||| |||||||| || || |||||||| |||||||| ||| Sbjct: 123 tcgcgggttggtgcccagtagaatttctccatacgaccatcacggataaggggagcatac 64 Query: 524 agcgtcgagaagtcgttgccggtgacgatgatgggcacgcgggggttctcctccttgttg 583 | || ||||| || || |||||||| |||| |||||| ||||||||||| || |||||| Sbjct: 63 aaggtggagaaatcattaccggtgacaatgacgggcacacgggggttctcttctttgttg 4 Query: 584 tac 586 ||| Sbjct: 3 tac 1
>emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphate carboxylase activase (pTA1.1) Length = 1011 Score = 93.7 bits (47), Expect = 7e-16 Identities = 155/191 (81%) Strand = Plus / Minus Query: 476 gcccagtagaacttctccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaag 535 ||||| |||||||||||||| || || |||||||| || ||||| |||| || |||||| Sbjct: 308 gcccaatagaacttctccatacgaccatcacggataagaggagcatacaatgtggagaag 249 Query: 536 tcgttgccggtgacgatgatgggcacgcgggggttctcctccttgttgtacatccccggg 595 ||||| || ||||| || ||||| || | || |||||| | |||||||||||| || ||| Sbjct: 248 tcgttaccagtgacaataatggggaccctggcgttctcttgcttgttgtacataccgggg 189 Query: 596 agctgcacgttggtgggcgcgtccgcgatgttcatcagggtggcgttcaccatctggttg 655 ||||| || || || || || ||||||||||| || ||||| ||||||||||||||| Sbjct: 188 agctggacatttgtcgggttatcagcgatgttcatgagagtggcattcaccatctggttg 129 Query: 656 ttcaccgtgta 666 || || ||||| Sbjct: 128 ttgacagtgta 118
>emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphosphate carboxylase activase (pJQ4) Length = 1655 Score = 93.7 bits (47), Expect = 7e-16 Identities = 155/191 (81%) Strand = Plus / Minus Query: 476 gcccagtagaacttctccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaag 535 ||||| |||||||||||||| || || |||||||| || ||||| |||| || |||||| Sbjct: 952 gcccaatagaacttctccatacgaccatcacggataagaggagcatacaatgtggagaag 893 Query: 536 tcgttgccggtgacgatgatgggcacgcgggggttctcctccttgttgtacatccccggg 595 ||||| || ||||| || ||||| || | || |||||| | |||||||||||| || ||| Sbjct: 892 tcgttaccagtgacaataatggggactctggcgttctcttgcttgttgtacataccgggg 833 Query: 596 agctgcacgttggtgggcgcgtccgcgatgttcatcagggtggcgttcaccatctggttg 655 ||||| ||||| || || || || |||||||| || ||||| ||||||||||||||| Sbjct: 832 agctggacgtttgtcgggttatcagcaatgttcatgagagtggcattcaccatctggttg 773 Query: 656 ttcaccgtgta 666 || || ||||| Sbjct: 772 ttgacagtgta 762
>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence Length = 108028 Score = 77.8 bits (39), Expect = 4e-11 Identities = 153/191 (80%) Strand = Plus / Plus Query: 476 gcccagtagaacttctccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaag 535 ||||||||||| || ||||| || || ||||| || | ||||| |||| ||| |||||| Sbjct: 6907 gcccagtagaatttttccatacgtccatcacgaattaaaggagcatacaacgtagagaag 6966 Query: 536 tcgttgccggtgacgatgatgggcacgcgggggttctcctccttgttgtacatccccggg 595 || ||||| ||||||||||| || ||||||| ||||| || ||||||||||| || || Sbjct: 6967 tcattgccagtgacgatgatagggacgcgggcattctcttctttgttgtacataccggga 7026 Query: 596 agctgcacgttggtgggcgcgtccgcgatgttcatcagggtggcgttcaccatctggttg 655 || || || ||||| || ||| || |||||||| ||||| || || |||||||||||| Sbjct: 7027 agttgaacattggtagggttgtcagcaatgttcatgagggttgcatttaccatctggttg 7086 Query: 656 ttcaccgtgta 666 || || ||||| Sbjct: 7087 ttgactgtgta 7097
>emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosphate carboxyase activase (pJQ11) Length = 883 Score = 77.8 bits (39), Expect = 4e-11 Identities = 153/191 (80%) Strand = Plus / Minus Query: 476 gcccagtagaacttctccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaag 535 |||||||||||||||||||| || || |||||||| || ||||| |||| || ||||| Sbjct: 222 gcccagtagaacttctccatacgaccatcacggataagtggagcatacaatgtggagaaa 163 Query: 536 tcgttgccggtgacgatgatgggcacgcgggggttctcctccttgttgtacatccccggg 595 ||||| || |||||||| || || || | || ||||| | |||||||||||| || ||| Sbjct: 162 tcgttaccagtgacgataatagggaccctggcattctcttgcttgttgtacataccgggg 103 Query: 596 agctgcacgttggtgggcgcgtccgcgatgttcatcagggtggcgttcaccatctggttg 655 ||||| || || || || ||| || |||||||| || ||||| |||||||| |||||| Sbjct: 102 agctggacatttgtcgggttgtcagcaatgttcatgagagtggcattcaccatttggttg 43 Query: 656 ttcaccgtgta 666 || || ||||| Sbjct: 42 ttgacagtgta 32 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 203 ccgtactccatgagcttctctatggtcatctt 234 |||||||| | ||||||||| ||||||||||| Sbjct: 495 ccgtactcgaggagcttctcaatggtcatctt 464
>emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putative rubisco activase (rba1 gene) Length = 321 Score = 77.8 bits (39), Expect = 4e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 158 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 217 ||||||||||||||||| || |||||||||||||| |||||||| |||||||| | ||| Sbjct: 210 agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 151 Query: 218 ttctctatggtcatcttgggctg 240 ||||| | |||||||| ||||| Sbjct: 150 ttctcgactgtcatctttggctg 128 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 311 acccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtc 366 |||||||||||||||||||||||||||||||| || ||||| || ||||| ||||| Sbjct: 57 acccacttgcgcacctcgtcgtcgtacacccgagcacgcagagcaccgaaaaagtc 2
>gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precursor (Rca) mRNA, complete cds Length = 1674 Score = 77.8 bits (39), Expect = 4e-11 Identities = 153/191 (80%) Strand = Plus / Minus Query: 476 gcccagtagaacttctccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaag 535 |||||||||||||||||||| || || |||||||| || ||||| |||| || ||||| Sbjct: 982 gcccagtagaacttctccatacgaccatcacggataagtggagcatacaatgtggagaaa 923 Query: 536 tcgttgccggtgacgatgatgggcacgcgggggttctcctccttgttgtacatccccggg 595 ||||| || |||||||| || || || | || ||||| | |||||||||||| || ||| Sbjct: 922 tcgttaccagtgacgataatagggaccctggcattctcttgcttgttgtacataccgggg 863 Query: 596 agctgcacgttggtgggcgcgtccgcgatgttcatcagggtggcgttcaccatctggttg 655 ||||| || || || || ||| || |||||||| || ||||| |||||||| |||||| Sbjct: 862 agctggacatttgtcgggttgtcagcaatgttcatgagagtggcattcaccatttggttg 803 Query: 656 ttcaccgtgta 666 || || ||||| Sbjct: 802 ttgacagtgta 792 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 203 ccgtactccatgagcttctctatggtcatctt 234 |||||||| | ||||||||| ||||||||||| Sbjct: 1255 ccgtactcgaggagcttctcaatggtcatctt 1224
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 71.9 bits (36), Expect = 3e-09 Identities = 81/96 (84%) Strand = Plus / Plus Query: 466 gcgggtgggcgcccagtagaacttctccatgcgcccgtcacggatcaggggagcgtacag 525 |||| ||||| ||||||||||||| ||||||||| || ||||| ||||| || || || Sbjct: 445517 gcggctgggctcccagtagaacttgcgcatgcgcccatcgcggatgaggggggcatagag 445576 Query: 526 cgtcgagaagtcgttgccggtgacgatgatgggcac 561 || || ||||||||||||||| ||||||||||||| Sbjct: 445577 ggtggaaaagtcgttgccggtggcgatgatgggcac 445612 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 596 agctgcacgttggtgggcgcgtccgcgatgttcatcagggtggcgttcaccatctggttg 655 ||||||||||||||||| ||| ||||||||||||||||||||| |||||| ||| || Sbjct: 445647 agctgcacgttggtggggttgtcggcgatgttcatcagggtggcgctcaccagttgggtg 445706 Query: 656 ttcaccgtgtactg 669 || || |||||||| Sbjct: 445707 ttgacggtgtactg 445720
>emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase Length = 1652 Score = 69.9 bits (35), Expect = 1e-08 Identities = 98/119 (82%) Strand = Plus / Minus Query: 551 atgatgggcacgcgggggttctcctccttgttgtacatccccgggagctgcacgttggtg 610 |||||||| || || | |||||| |||||||||||||| || |||||||| |||||||| Sbjct: 911 atgatggggacacgtgcgttctcttccttgttgtacattcctgggagctggacgttggtt 852 Query: 611 ggcgcgtccgcgatgttcatcagggtggcgttcaccatctggttgttcaccgtgtactg 669 || || || |||||||| || || ||||| |||||||||||||| || |||||||| Sbjct: 851 gggttatcagcaatgttcatgagtgttgcgttaaccatctggttgttgacagtgtactg 793
>emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubisco activase (rca gene) Length = 678 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 623 atgttcatcagggtggcgttcaccatctggttgttcaccgtgtactg 669 |||||||| |||||||| || ||||||||||||||||| |||||||| Sbjct: 533 atgttcatgagggtggcattgaccatctggttgttcacagtgtactg 487 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 478 ccagtagaacttctccatgcgcccgtcacggatca 512 |||||||||||||||||| ||||| ||||| |||| Sbjct: 678 ccagtagaacttctccatacgcccatcacgaatca 644
>emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase Length = 2031 Score = 61.9 bits (31), Expect = 3e-06 Identities = 160/203 (78%) Strand = Plus / Minus Query: 476 gcccagtagaacttctccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaag 535 ||||||||||| || ||||| || || ||||| || || || || || | ||| |||||| Sbjct: 997 gcccagtagaatttatccatccgaccatcacgaatgagaggtgcatataacgttgagaag 938 Query: 536 tcgttgccggtgacgatgatgggcacgcgggggttctcctccttgttgtacatccccggg 595 ||||| || || || |||||||| || | ||| || || |||||||| ||||| || || Sbjct: 937 tcgttaccagttactatgatgggaactctgggattttcttccttgttatacatgcctggt 878 Query: 596 agctgcacgttggtgggcgcgtccgcgatgttcatcagggtggcgttcaccatctggttg 655 |||||||| ||||| || ||| || |||||||| || || || || ||||||||||| Sbjct: 877 agctgcacattggttgggttgtcagcaatgttcataagagtagcatttaccatctggtta 818 Query: 656 ttcaccgtgtactgcgtcgtccc 678 ||||| |||||||| || ||||| Sbjct: 817 ttcactgtgtactgggtagtccc 795
>ref|NM_105969.1| Arabidopsis thaliana ATP binding / ATPase AT1G73110 mRNA, complete cds Length = 1437 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 478 ccagtagaacttctccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaagtc 537 |||||||||||||||||| | || ||||||||||| ||||| ||||| || ||||| || Sbjct: 970 ccagtagaacttctccattcttccttcacggatcagtggagcatacagtgtagagaaatc 911 Query: 538 gttgccggtgac 549 ||| || ||||| Sbjct: 910 gttccctgtgac 899
>gb|AY078044.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds Length = 1299 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 478 ccagtagaacttctccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaagtc 537 |||||||||||||||||| | || ||||||||||| ||||| ||||| || ||||| || Sbjct: 936 ccagtagaacttctccattcttccttcacggatcagtggagcatacagtgtagagaaatc 877 Query: 538 gttgccggtgac 549 ||| || ||||| Sbjct: 876 gttccctgtgac 865
>gb|AF361834.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds Length = 1437 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 478 ccagtagaacttctccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaagtc 537 |||||||||||||||||| | || ||||||||||| ||||| ||||| || ||||| || Sbjct: 970 ccagtagaacttctccattcttccttcacggatcagtggagcatacagtgtagagaaatc 911 Query: 538 gttgccggtgac 549 ||| || ||||| Sbjct: 910 gttccctgtgac 899
>emb|BX815704.1|CNS0AARM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS85ZG11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1496 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 478 ccagtagaacttctccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaagtc 537 |||||||||||||||||| | || ||||||||||| ||||| ||||| || ||||| || Sbjct: 944 ccagtagaacttctccattcttccttcacggatcagtggagcatacagtgtagagaaatc 885 Query: 538 gttgccggtgac 549 ||| || ||||| Sbjct: 884 gttccctgtgac 873
>dbj|AK118942.1| Arabidopsis thaliana At1g73110 mRNA for unknown protein, complete cds, clone: RAFL21-28-D21 Length = 1447 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 478 ccagtagaacttctccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaagtc 537 |||||||||||||||||| | || ||||||||||| ||||| ||||| || ||||| || Sbjct: 957 ccagtagaacttctccattcttccttcacggatcagtggagcatacagtgtagagaaatc 898 Query: 538 gttgccggtgac 549 ||| || ||||| Sbjct: 897 gttccctgtgac 886
>gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N23 genomic sequence, complete sequence Length = 116944 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 478 ccagtagaacttctccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaagtc 537 |||||||||||||||||| | || ||||||||||| ||||| ||||| || ||||| || Sbjct: 97615 ccagtagaacttctccattcttccttcacggatcagtggagcatacagtgtagagaaatc 97674 Query: 538 gttgccggtgac 549 ||| || ||||| Sbjct: 97675 gttccctgtgac 97686
>emb|BX813694.1|CNS0ADV2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB33ZF10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1426 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 478 ccagtagaacttctccatgcgcccgtcacggatcaggggagcgtacagcgtcgagaagtc 537 |||||||||||||||||| | || ||||||||||| ||||| ||||| || ||||| || Sbjct: 998 ccagtagaacttctccattcttccttcacggatcagtggagcatacagtgtagagaaatc 939 Query: 538 gtt 540 ||| Sbjct: 938 gtt 936
>gb|DQ123944.1| Coffea arabica x Coffea canephora clone HT-SSH2-H08 mRNA sequence Length = 488 Score = 48.1 bits (24), Expect = 0.038 Identities = 33/36 (91%) Strand = Plus / Minus Query: 173 acgttctcctgctcctggaccagcatgtggccgtac 208 |||||||||||||| ||||| ||||||| ||||||| Sbjct: 36 acgttctcctgctcttggacgagcatgttgccgtac 1
>emb|X60173.1|HVNAR7 Hordeum vulgare nar7 gene for NAD(P)H-bispecific nitrate reductase Length = 3538 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 529 cgagaagtcgttgccggtgacgatga 554 |||| ||||||||||||||||||||| Sbjct: 2530 cgagtagtcgttgccggtgacgatga 2505
>gb|AC140331.2| Mus musculus BAC clone RP23-406J20 from chromosome 13, complete sequence Length = 192473 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 168 gcttgacgttctcctgctcctggaccagc 196 ||||||| |||||||| |||||||||||| Sbjct: 170620 gcttgacattctcctgttcctggaccagc 170592
>ref|XM_974982.1| PREDICTED: Mus musculus desmoplakin (Dsp), mRNA Length = 8280 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 168 gcttgacgttctcctgctcctggaccagc 196 ||||||| |||||||| |||||||||||| Sbjct: 4777 gcttgacattctcctgttcctggaccagc 4749
>ref|XM_912083.2| PREDICTED: Mus musculus desmoplakin, transcript variant 3 (Dsp), mRNA Length = 8583 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 168 gcttgacgttctcctgctcctggaccagc 196 ||||||| |||||||| |||||||||||| Sbjct: 4996 gcttgacattctcctgttcctggaccagc 4968
>ref|XM_621314.3| PREDICTED: Mus musculus desmoplakin, transcript variant 1 (Dsp), mRNA Length = 9592 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 168 gcttgacgttctcctgctcctggaccagc 196 ||||||| |||||||| |||||||||||| Sbjct: 5360 gcttgacattctcctgttcctggaccagc 5332
>gb|AC124549.5| Mus musculus BAC clone RP23-284E24 from 13, complete sequence Length = 199240 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 168 gcttgacgttctcctgctcctggaccagc 196 ||||||| |||||||| |||||||||||| Sbjct: 40085 gcttgacattctcctgttcctggaccagc 40057
>dbj|AK009006.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2300002E22 product:desmoplakin, full insert sequence Length = 1423 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 168 gcttgacgttctcctgctcctggaccagc 196 ||||||| |||||||| |||||||||||| Sbjct: 803 gcttgacattctcctgttcctggaccagc 775
>emb|BX818441.1|CNS0ACQX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL79ZC02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 593 Score = 42.1 bits (21), Expect = 2.3 Identities = 61/73 (83%), Gaps = 1/73 (1%) Strand = Plus / Minus Query: 478 ccagtagaacttctccatgcgcccgtcacggatcag-gggagcgtacagcgtcgagaagt 536 |||||||||||||||||| | || ||||||||||| | |||| ||||| || ||||| | Sbjct: 208 ccagtagaacttctccattcttccttcacggatcagtgagagcatacagtgtagagaaat 149 Query: 537 cgttgccggtgac 549 |||| || ||||| Sbjct: 148 cgttccctgtgac 136
>gb|BC033467.1| Mus musculus desmoplakin, mRNA (cDNA clone IMAGE:4949004) Length = 2915 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 168 gcttgacgttctcctgctcctggaccagc 196 ||||||| |||||||| |||||||||||| Sbjct: 2607 gcttgacattctcctgttcctggaccagc 2579
>gb|AC161248.2| Mus musculus BAC clone RP24-530L5 from chromosome 12, complete sequence Length = 155861 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 ggtgtccaccagcctcacca 404 |||||||||||||||||||| Sbjct: 136818 ggtgtccaccagcctcacca 136799
>gb|BC033474.1| Homo sapiens renin, mRNA (cDNA clone MGC:34221 IMAGE:5188566), complete cds Length = 1475 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 ctccatgagcttctctatgg 227 |||||||||||||||||||| Sbjct: 956 ctccatgagcttctctatgg 937
>gb|AY664490.1| Macaca fascicularis renin (REN) mRNA, complete cds Length = 1280 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 ctccatgagcttctctatgg 227 |||||||||||||||||||| Sbjct: 989 ctccatgagcttctctatgg 970
>gb|BC047752.1| Homo sapiens renin, mRNA (cDNA clone MGC:54147 IMAGE:5590211), complete cds Length = 1471 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 ctccatgagcttctctatgg 227 |||||||||||||||||||| Sbjct: 959 ctccatgagcttctctatgg 940
>gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome Length = 2650701 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 541 gccggtgacgatgatgggca 560 |||||||||||||||||||| Sbjct: 703826 gccggtgacgatgatgggca 703845
>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence Length = 1519 Score = 40.1 bits (20), Expect = 9.3 Identities = 74/92 (80%) Strand = Plus / Minus Query: 143 aggtacttgtcggcgagctgcacacgcttgacgttctcctgctcctggaccagcatgtgg 202 ||||||||||| || | ||| || | ||| || ||||| ||||| || || ||||||| | Sbjct: 1332 aggtacttgtcagctaactgaactctcttaacattctcttgctcttgaacaagcatgttg 1273 Query: 203 ccgtactccatgagcttctctatggtcatctt 234 |||||||| | |||||| || || |||||||| Sbjct: 1272 ccgtactcgaggagcttatcgatagtcatctt 1241
>gb|AC124814.10| Mus musculus chromosome 1, clone RP24-119P5, complete sequence Length = 162020 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 32 catatatatagtgcatgcatgcat 55 ||||| |||||||||||||||||| Sbjct: 122744 catatgtatagtgcatgcatgcat 122721
>ref|NM_001032916.1| Macaca mulatta prorenin (REN), mRNA Length = 1461 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 ctccatgagcttctctatgg 227 |||||||||||||||||||| Sbjct: 974 ctccatgagcttctctatgg 955
>ref|XM_743857.1| Aspergillus fumigatus Af293 hypothetical protein (Afu7g05590) partial mRNA Length = 720 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 ccgtactccatgagcttctc 222 |||||||||||||||||||| Sbjct: 212 ccgtactccatgagcttctc 193
>gb|L00071.1|HUMREN08 Human renin gene, exon 8 Length = 172 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 ctccatgagcttctctatgg 227 |||||||||||||||||||| Sbjct: 124 ctccatgagcttctctatgg 105
>gb|AC093889.2| Homo sapiens BAC clone RP11-671G14 from 7, complete sequence Length = 198453 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 catatatatagtgcatgcat 51 |||||||||||||||||||| Sbjct: 31511 catatatatagtgcatgcat 31492
>ref|NM_000537.2| Homo sapiens renin (REN), mRNA Length = 1461 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 ctccatgagcttctctatgg 227 |||||||||||||||||||| Sbjct: 974 ctccatgagcttctctatgg 955
>emb|AL592146.8| Human DNA sequence from clone RP11-74C13 on chromosome 1 Contains the SOX13 gene for SOX13 SRY (sex determining region Y)-box 13, two novel genes, a novel gene (FLJ10761), the 3' end of the REN gene for renin and two CpG islands, complete sequence Length = 101862 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ctccatgagcttctctatgg 227 |||||||||||||||||||| Sbjct: 95051 ctccatgagcttctctatgg 95070
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 cccgtgcccgcagcgcgccg 358 |||||||||||||||||||| Sbjct: 2456174 cccgtgcccgcagcgcgccg 2456155
>emb|CR933822.8| Zebrafish DNA sequence from clone DKEY-30F7 in linkage group 19, complete sequence Length = 187377 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 tatatagtgcatgcatgcat 55 |||||||||||||||||||| Sbjct: 65570 tatatagtgcatgcatgcat 65551
>emb|X00063.1|HSRENK Human kidney mRNA fragment for renin (aa 105-401) Length = 1096 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 ctccatgagcttctctatgg 227 |||||||||||||||||||| Sbjct: 609 ctccatgagcttctctatgg 590
>emb|CR926484.1| Pongo pygmaeus mRNA; cDNA DKFZp469I191 (from clone DKFZp469I191) Length = 1474 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 ctccatgagcttctctatgg 227 |||||||||||||||||||| Sbjct: 974 ctccatgagcttctctatgg 955
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 534 agtcgttgccggtgacgatg 553 |||||||||||||||||||| Sbjct: 2128244 agtcgttgccggtgacgatg 2128263
>emb|CR536498.1| Homo sapiens full open reading frame cDNA clone RZPDo834A0620D for gene REN, renin; complete cds, incl. stopcodon Length = 1221 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 ctccatgagcttctctatgg 227 |||||||||||||||||||| Sbjct: 930 ctccatgagcttctctatgg 911
>gb|AY436324.1| Homo sapiens renin (REN) gene, complete cds Length = 14148 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 ctccatgagcttctctatgg 227 |||||||||||||||||||| Sbjct: 11638 ctccatgagcttctctatgg 11619
>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29 Length = 311000 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 ccacggcctcgtccgggacg 421 |||||||||||||||||||| Sbjct: 20046 ccacggcctcgtccgggacg 20027
>emb|AJ132342.1|CJA132342 Callithrix jacchus mRNA for preprorenin Length = 1203 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 ctccatgagcttctctatgg 227 |||||||||||||||||||| Sbjct: 912 ctccatgagcttctctatgg 893
>emb|CR857478.1| Pongo pygmaeus mRNA; cDNA DKFZp469O0929 (from clone DKFZp469O0929) Length = 2747 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 ggtgtccaccagcctcacca 404 |||||||||||||||||||| Sbjct: 224 ggtgtccaccagcctcacca 243
>gb|M10151.1|HUMRENA4 Homo sapiens renin (REN) gene, exons 6, 7, 8, and 9 Length = 3057 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 ctccatgagcttctctatgg 227 |||||||||||||||||||| Sbjct: 2172 ctccatgagcttctctatgg 2153
>gb|AF449411.1| Myxococcus xanthus cosmid pREG3E1, complete sequence Length = 36615 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 cctcgtccgggacgttgtcg 427 |||||||||||||||||||| Sbjct: 34609 cctcgtccgggacgttgtcg 34590
>gb|AC024259.17| Homo sapiens chromosome 7 clone RP11-105B19, complete sequence Length = 177303 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 catatatatagtgcatgcat 51 |||||||||||||||||||| Sbjct: 68633 catatatatagtgcatgcat 68652
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 cacgccgatctcgccgaccc 314 |||||||||||||||||||| Sbjct: 2558497 cacgccgatctcgccgaccc 2558516
>gb|AF193454.1|F193446S09 Pan troglodytes renin (REN) gene, exon 8 Length = 142 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 ctccatgagcttctctatgg 227 |||||||||||||||||||| Sbjct: 112 ctccatgagcttctctatgg 93
>gb|AC098590.3| Homo sapiens BAC clone RP11-324J13 from 4, complete sequence Length = 157544 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 31 acatatatatagtgcatgcatgca 54 ||||||||||||| |||||||||| Sbjct: 121059 acatatatatagtacatgcatgca 121036
>ref|NM_001009122.1| Pan troglodytes renin (REN), mRNA Length = 1221 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 ctccatgagcttctctatgg 227 |||||||||||||||||||| Sbjct: 930 ctccatgagcttctctatgg 911
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 607 ggtgggcgcgtccgcgatgttcatcagg 634 |||| ||||| ||||||||||||||||| Sbjct: 640709 ggtgagcgcgaccgcgatgttcatcagg 640682
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 cgcgccgaagaagtcgatgg 371 |||||||||||||||||||| Sbjct: 2367826 cgcgccgaagaagtcgatgg 2367845 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 cgcgccgaagaagtcgatgg 371 |||||||||||||||||||| Sbjct: 425250 cgcgccgaagaagtcgatgg 425231
>gb|AY845069.1| Olea europaea clone SRAP-12 SRAP marker genomic sequence Length = 262 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 623 atgttcatcagggtggcgttcaccatctggtt 654 |||||||| ||||| || |||||||||||||| Sbjct: 134 atgttcataagggttgcattcaccatctggtt 103
>gb|AY662332.2| Macaca mulatta prorenin (REN) mRNA, complete cds Length = 1461 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 ctccatgagcttctctatgg 227 |||||||||||||||||||| Sbjct: 974 ctccatgagcttctctatgg 955
>emb|BX936423.12| Zebrafish DNA sequence from clone DKEY-174M14 in linkage group 20, complete sequence Length = 170767 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 213 tgagcttctctatggtcatcttgg 236 |||||||||| ||||||||||||| Sbjct: 59941 tgagcttctcaatggtcatcttgg 59964
>emb|CT030164.9| Mouse DNA sequence from clone RP23-311P8 on chromosome 12, complete sequence Length = 224188 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 ggtgtccaccagcctcacca 404 |||||||||||||||||||| Sbjct: 69683 ggtgtccaccagcctcacca 69664
>emb|AL805929.7| Mouse DNA sequence from clone RP23-252O5 on chromosome X, complete sequence Length = 175802 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 tgcatgcatgcatcttaagt 62 |||||||||||||||||||| Sbjct: 22325 tgcatgcatgcatcttaagt 22306 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,232,693 Number of Sequences: 3902068 Number of extensions: 4232693 Number of successful extensions: 88413 Number of sequences better than 10.0: 143 Number of HSP's better than 10.0 without gapping: 143 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 87086 Number of HSP's gapped (non-prelim): 1252 length of query: 679 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 656 effective length of database: 17,143,297,704 effective search space: 11246003293824 effective search space used: 11246003293824 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)