| Clone Name | rbaal33e14 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | CREG1_MOUSE (O88668) CREG1 protein precursor (Cellular repressor... | 29 | 4.8 | 2 | SO1A2_HUMAN (P46721) Solute carrier organic anion transporter fa... | 28 | 8.2 | 3 | ARR13_ARATH (Q9ZVD3) Putative two-component response regulator A... | 28 | 8.2 |
|---|
>CREG1_MOUSE (O88668) CREG1 protein precursor (Cellular repressor of| E1A-stimulated genes 1) Length = 220 Score = 29.3 bits (64), Expect = 4.8 Identities = 18/46 (39%), Positives = 20/46 (43%) Frame = +2 Query: 218 RQTRAKLLAQTSSALFISPVDTEGFLSSGDWGRIVIDFRPQATPPR 355 R A LLA AL +SP G GDW +D R PPR Sbjct: 10 RSLLAALLAPALVALLVSPASGRGGRDHGDWD---VDRRLPPLPPR 52
>SO1A2_HUMAN (P46721) Solute carrier organic anion transporter family member 1A2| (Solute carrier family 21 member 3) (Sodium-independent organic anion transporter) (Organic anion-transporting polypeptide 1) (OATP1) (OATP-A) Length = 670 Score = 28.5 bits (62), Expect = 8.2 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 4/44 (9%) Frame = -2 Query: 128 GTGIQLSDGDCSCPGTEIQLSDGVHLC----YCXVMIRYQLLLS 9 GTGI + +CSC T S + LC C +M++Y L+LS Sbjct: 474 GTGINMVFQNCSCIQTSGNSSAVLGLCDKGPDCSLMLQYFLILS 517
>ARR13_ARATH (Q9ZVD3) Putative two-component response regulator ARR13| Length = 572 Score = 28.5 bits (62), Expect = 8.2 Identities = 13/61 (21%), Positives = 28/61 (45%) Frame = +3 Query: 108 RQLYSRALIAHSRSRPDLQASITFSLTFYSYLARGKSARQEPSCLHKPAVLYSSALWIQK 287 R YS ++ HSR + + + ++ Y+Y+ R S +PS + ++ + K Sbjct: 328 RSFYSESVHGHSRLLSEAREPVRYNQMSYNYMNRNISFENQPSQNEETRTVFEPPVMANK 387 Query: 288 V 290 + Sbjct: 388 I 388 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,153,937 Number of Sequences: 219361 Number of extensions: 1330446 Number of successful extensions: 2983 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2904 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2981 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)