| Clone Name | rbaal32p05 |
|---|---|
| Clone Library Name | barley_pub |
>MUC1_YEAST (P08640) Mucin-like protein 1 precursor| Length = 1367 Score = 37.0 bits (84), Expect = 0.060 Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 7/118 (5%) Frame = +2 Query: 119 SITHNSSV-VSKPRGSTLLFTSPSIVGSHERSSFGPEFEATHEA----ITSTSALTSSGT 283 S T +SS V P ST +S + S SS P +T E+ +TS++ +SS Sbjct: 386 STTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAP 445 Query: 284 CVRRTPE--SVPKVVPTSLATASHGVPVVRFARSSPPRLTASAIPGGTSGSTCCNGRP 451 T E S P P+S T S PV SS +++ +P +S +T + P Sbjct: 446 VTSSTTESSSAPVPTPSSSTTESSSAPVT----SSTTESSSAPVPTPSSSTTESSSAP 499 Score = 30.8 bits (68), Expect = 4.3 Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 10/115 (8%) Frame = +2 Query: 119 SITHNSSV-VSKPRGSTLLFTSPSIVGSHERSSFGP-------EFEATHEAITSTSALTS 274 S T +SS V P ST +S + S SS P E++ +TS++ +S Sbjct: 320 STTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESS 379 Query: 275 SGTCVRRTPE--SVPKVVPTSLATASHGVPVVRFARSSPPRLTASAIPGGTSGST 433 S T E S P P+S T S PV SS +++ + T+ S+ Sbjct: 380 SAPVTSSTTESSSAPVPTPSSSTTESSSAPVT----SSTTESSSAPVTSSTTESS 430 Score = 29.6 bits (65), Expect = 9.6 Identities = 40/151 (26%), Positives = 58/151 (38%), Gaps = 17/151 (11%) Frame = +2 Query: 119 SITHNSSV-VSKPRGSTLLFTS---PSIVGSHERSSFGPEFEATHEAITSTSALTSSGTC 286 S T +SS V P ST +S P+ S SS P + + ++SA +S+ Sbjct: 770 STTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSVAPVPTPSSSSNITSSAPSSTPFS 829 Query: 287 VRRTPESVPKVVPTSLATASHGVPVVRFAR----------SSPPRLTASA---IPGGTSG 427 SVP P+S T S PV SS +T+SA IP ++ Sbjct: 830 SSTESSSVPVPTPSSSTTESSSAPVSSSTTESSVAPVPTPSSSSNITSSAPSSIPFSSTT 889 Query: 428 STCCNGRP*SPGSERIDISSSELMADSELST 520 + G +P S + S +E S T Sbjct: 890 ESFSTGTTVTPSSSKYPGSQTETSVSSTTET 920
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 33.1 bits (74), Expect = 0.87 Identities = 22/103 (21%), Positives = 47/103 (45%) Frame = +2 Query: 125 THNSSVVSKPRGSTLLFTSPSIVGSHERSSFGPEFEATHEAITSTSALTSSGTCVRRTPE 304 T +++ +S G+T + T PS + + ++ +A T ++++ T T Sbjct: 4375 TGSTATLSSTPGTTWILTEPSTTATVTVPTGSTATASSTQATAGTPHVSTTATTPTVTSS 4434 Query: 305 SVPKVVPTSLATASHGVPVVRFARSSPPRLTASAIPGGTSGST 433 K P+S + +P +R ++P + +AIP + G+T Sbjct: 4435 ---KATPSSSPGTATALPALRSTATTPTATSFTAIPSSSLGTT 4474 Score = 33.1 bits (74), Expect = 0.87 Identities = 22/103 (21%), Positives = 46/103 (44%) Frame = +2 Query: 125 THNSSVVSKPRGSTLLFTSPSIVGSHERSSFGPEFEATHEAITSTSALTSSGTCVRRTPE 304 T +++ S G+T + T P+ + S+ ++ +A T ++++ T T Sbjct: 1892 TSSTATPSSTPGTTWILTKPTTTATTTASTGSTATASSTQATAGTPHVSTTATTPTVTSS 1951 Query: 305 SVPKVVPTSLATASHGVPVVRFARSSPPRLTASAIPGGTSGST 433 K P S + +P +R ++P + +AIP + G+T Sbjct: 1952 ---KATPFSSPGTATALPALRSTATTPTATSFTAIPSSSLGTT 1991 Score = 30.0 bits (66), Expect = 7.3 Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 7/102 (6%) Frame = +2 Query: 146 SKPRGSTLLFTSPSIV-------GSHERSSFGPEFEATHEAITSTSALTSSGTCVRRTPE 304 S G+T + T PS GS +S T + +TST A T + R TP Sbjct: 3126 SSTPGTTWILTEPSTTATVTVPTGSTATASSTRATAGTLKVLTST-ATTPTVISSRATPS 3184 Query: 305 SVPKVVPTSLATASHGVPVVRFARSSPPRLTASAIPGGTSGS 430 S P ATA +P +R ++P + +AIP + G+ Sbjct: 3185 SSP-----GTATA---LPALRSTATTPTATSVTAIPSSSLGT 3218 Score = 30.0 bits (66), Expect = 7.3 Identities = 26/111 (23%), Positives = 44/111 (39%), Gaps = 17/111 (15%) Frame = +2 Query: 152 PRGSTLLFTSPSIVGSHERSSFGPEFEATHEAITST--------------SALTSSGTCV 289 P+ T T+P+ S SS P T +TST S L ++GT Sbjct: 2994 PKVLTSQATTPTATSSKATSSSSPRTATTLPVLTSTATKSTATSFTPIPSSTLGTTGTSQ 3053 Query: 290 RRTPE---SVPKVVPTSLATASHGVPVVRFARSSPPRLTASAIPGGTSGST 433 R P ++ + P+S +H V+ ++ ++ + P T G+T Sbjct: 3054 NRPPHPMATMSTIHPSSTPETTHTSTVLTTKATTTRATSSMSTPSSTPGTT 3104
>YLU2_PICAN (P34735) Hypothetical protein in LEU2 3'region (Fragment)| Length = 373 Score = 33.1 bits (74), Expect = 0.87 Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 3/124 (2%) Frame = +2 Query: 80 SAIKNSPDMRSKISITHNSSVVSKPRGSTLLFTSPSIVGSHERSSFGPEFEATHEAITST 259 S +S S S + +S S P+ ST+ T S S +S T +I+S Sbjct: 129 STTSSSSSSLSSSSTSSSSKQSSSPQSSTMSSTDSSPTSSSLSAS-----STTTSSISSF 183 Query: 260 S---ALTSSGTCVRRTPESVPKVVPTSLATASHGVPVVRFARSSPPRLTASAIPGGTSGS 430 S + +SS T TP S + TS++ + ++ +S +ASA +S S Sbjct: 184 SFSQSSSSSSTTSSSTPSSESVRITTSVSPGNMQTSIIYITQSVATATSASAAASSSSAS 243 Query: 431 TCCN 442 + N Sbjct: 244 SANN 247
>POLN_SPDV (Q8JJX1) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)| [Contains: P123; mRNA capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1); Protease/triphosphatase/NTPase/helicase nsP2 (EC 3.4.22.-) (EC 3.1.3.33) (EC 3.6.1.1 Length = 2601 Score = 33.1 bits (74), Expect = 0.87 Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 4/72 (5%) Frame = +2 Query: 230 EATHEAITSTSALTSSGTCVRRTPESVPKVVPTSLATASHGVPVVRFARSSPPRLTASA- 406 E+ + S S++TSS V P P V SLA+++H R RS+P ASA Sbjct: 1817 ESRSSRMGSQSSVTSSAGSVPPAPRRAPAVSAASLASSAHS----RSVRSAPAMRAASAG 1872 Query: 407 ---IPGGTSGST 433 + SGST Sbjct: 1873 ARSVRSAQSGST 1884
>SP96_DICDI (P14328) Spore coat protein SP96| Length = 600 Score = 32.3 bits (72), Expect = 1.5 Identities = 29/109 (26%), Positives = 46/109 (42%) Frame = +2 Query: 80 SAIKNSPDMRSKISITHNSSVVSKPRGSTLLFTSPSIVGSHERSSFGPEFEATHEAITST 259 SA +SP + S +S+ S P S +SPS S SS P A+ + S+ Sbjct: 463 SAASSSPSSSAASSSPSSSAASSSPSSSASSSSSPS---SSASSSSAPSSSASSSSAPSS 519 Query: 260 SALTSSGTCVRRTPESVPKVVPTSLATASHGVPVVRFARSSPPRLTASA 406 SA +SS + + S T++AT + A ++ T +A Sbjct: 520 SASSSSAS--SSSASSAATTAATTIATTAATTTATTTATTATTTATTTA 566
>PME17_CHICK (Q98917) Melanocyte protein Pmel 17 precursor (115 kDa melanosomal| matrix protein) Length = 763 Score = 32.3 bits (72), Expect = 1.5 Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 5/103 (4%) Frame = +2 Query: 140 VVSKPRGSTLLFTSPSIVGSHERSSFGPEFEATHEAITSTSALTSSGTCVRRTPESVPKV 319 V + G+T + G+ + + GP AT E+I +A + G V T ES+ Sbjct: 445 VAAATPGATAADVAVDTAGATDGDAVGPTAAATAESIADPTAGATDGDAVGATAESIAD- 503 Query: 320 VPTSLATASHGVPVVRFARS---SPPRLTASAIPGG--TSGST 433 PT+ AT V A + + P A+A+ G T+G+T Sbjct: 504 -PTAGATDGDAVGPTAAATAESIADPTAGATAVSSGSATAGAT 545
>NAS34_CAEEL (Q21059) Zinc metalloproteinase nas-34 precursor (EC 3.4.24.21)| (Nematode astacin 34) (Defective hatching protein 1) Length = 605 Score = 32.0 bits (71), Expect = 1.9 Identities = 21/62 (33%), Positives = 29/62 (46%) Frame = +2 Query: 254 STSALTSSGTCVRRTPESVPKVVPTSLATASHGVPVVRFARSSPPRLTASAIPGGTSGST 433 STSA T++ T P +VP V PT+ T AR+S T A P T+ ++ Sbjct: 474 STSAPTTTSTTTTTAPITVPTVSPTTTTTRQ----TTTTARTSTTTTTTQAPPTTTTSTS 529 Query: 434 CC 439 C Sbjct: 530 QC 531
>CAPB_BACSU (P96736) PGA synthase capB (EC 6.3.2.-) (Gamma-polyglutamic acid| synthase) Length = 393 Score = 32.0 bits (71), Expect = 1.9 Identities = 17/40 (42%), Positives = 22/40 (55%) Frame = -3 Query: 390 RGGELLANLTTGTPWEAVAKEVGTTFGTDSGVLRTQVPED 271 RG + LTTG EA K VG T GTD+ ++ PE+ Sbjct: 39 RGKSTVTRLTTGILIEAGYKTVGKTTGTDARMIYWDTPEE 78
>XYNA_PSEFL (P14768) Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) (Xylanase| A) (1,4-beta-D-xylan xylanohydrolase A) (XYLA) Length = 611 Score = 32.0 bits (71), Expect = 1.9 Identities = 28/83 (33%), Positives = 41/83 (49%) Frame = +2 Query: 194 GSHERSSFGPEFEATHEAITSTSALTSSGTCVRRTPESVPKVVPTSLATASHGVPVVRFA 373 GS ER S G + A +S A + + +P SV V +S+A++S PV + Sbjct: 113 GSAERPSVGGSICSGSVASSSAPASSVPSSIASSSPSSVASSVISSMASSS---PV---S 166 Query: 374 RSSPPRLTASAIPGGTSGSTCCN 442 SS AS+ PG +SG+ CN Sbjct: 167 SSS----VASSTPGSSSGNQQCN 185
>MAP4_MOUSE (P27546) Microtubule-associated protein 4 (MAP 4)| Length = 1125 Score = 32.0 bits (71), Expect = 1.9 Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 1/84 (1%) Frame = +2 Query: 176 TSPSIVGSHERSSFGPEFEATHEAITSTSALTSSGTCVRRTPESVPKVVPTSLATASHGV 355 TSPS S GP+ T TS S L S+G R ++PK PTS+ T Sbjct: 759 TSPSKPSSAPALKPGPKTTPTVSKATSPSTLVSTGPSSRSPATTLPK-RPTSIKTEGKPA 817 Query: 356 PVVRF-ARSSPPRLTASAIPGGTS 424 V R A+S+ L+ S +S Sbjct: 818 DVKRMTAKSASADLSRSKTTSASS 841
>CLAP1_HUMAN (Q7Z460) CLIP-associating protein 1 (Cytoplasmic linker-associated| protein 1) (Multiple asters homolog 1) Length = 1538 Score = 31.6 bits (70), Expect = 2.5 Identities = 36/126 (28%), Positives = 54/126 (42%), Gaps = 4/126 (3%) Frame = +2 Query: 107 RSKISITHNSSVVSKPRGSTLLFTSPSIVGSHERSSFGPEFEATHEAITSTSALTSSGTC 286 RS+ I N++ +K + S+ T+P ++ P A+ I + + S T Sbjct: 597 RSRSDIDVNAAASAKSKVSSSSGTTPF----SSAAALPPGSYASLGRIRTRRQSSGSATN 652 Query: 287 VRRTPE----SVPKVVPTSLATASHGVPVVRFARSSPPRLTASAIPGGTSGSTCCNGRP* 454 V TP+ S KVV S + S SSP +L S G T GS+ G P Sbjct: 653 VASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSS--RGPPV 710 Query: 455 SPGSER 472 +P SE+ Sbjct: 711 TPSSEK 716
>HXA9_MORSA (Q9PWD5) Homeobox protein Hox-A9| Length = 269 Score = 31.6 bits (70), Expect = 2.5 Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Frame = +3 Query: 270 HPQGPVFAERQSRCQKWYLPP*Q-QPPMACLL*DLPGVHLHG 392 HPQGPV A+ R Q W L P PMA LP H +G Sbjct: 86 HPQGPVGADTDGRYQSWLLEPMSGSLPMA----GLPTTHHYG 123
>Y3535_METJA (Q60291) Hypothetical protein MJECL35| Length = 630 Score = 31.2 bits (69), Expect = 3.3 Identities = 18/48 (37%), Positives = 27/48 (56%) Frame = -3 Query: 654 VKGREDFIPKPEETRRLIKSYYGISRNLLIKFEDDQIDETSIIAQVLS 511 +KG D +P+ T L KSY G+S N + DQI + I+A ++S Sbjct: 256 IKGSVDTYEQPDRTEILTKSYEGMSLNYELFGSGDQIID-GILASIIS 302
>WSC2_YEAST (P53832) Cell wall integrity and stress response component 2| precursor Length = 503 Score = 30.4 bits (67), Expect = 5.6 Identities = 28/115 (24%), Positives = 48/115 (41%) Frame = +2 Query: 89 KNSPDMRSKISITHNSSVVSKPRGSTLLFTSPSIVGSHERSSFGPEFEATHEAITSTSAL 268 K S + +K S T +S+ S ST TS + S +S ++ + TST++ Sbjct: 146 KTSTKLDTKTS-TSSSATHSSSSSST---TSTTTSSSETTTSSSSSSSSSSTSTTSTTST 201 Query: 269 TSSGTCVRRTPESVPKVVPTSLATASHGVPVVRFARSSPPRLTASAIPGGTSGST 433 TSS T +P + S ++ + + +S T++A T ST Sbjct: 202 TSSTTSTSSSPSTTSSSTSASSSSETSSTQATSSSTTSTSSSTSTATVTSTPSST 256
>CHI3_CANAL (P40954) Chitinase 3 precursor (EC 3.2.1.14)| Length = 567 Score = 30.0 bits (66), Expect = 7.3 Identities = 34/112 (30%), Positives = 48/112 (42%), Gaps = 1/112 (0%) Frame = +2 Query: 92 NSPDMRSKISITHN-SSVVSKPRGSTLLFTSPSIVGSHERSSFGPEFEATHEAITSTSAL 268 +S SK S T SS +S ST TS S S S+ ++ + TST A Sbjct: 339 SSSSKTSKTSTTSTTSSSISSTTSSTTSSTSSSSTSSSTSSTTSSSTTSSQISTTST-AP 397 Query: 269 TSSGTCVRRTPESVPKVVPTSLATASHGVPVVRFARSSPPRLTASAIPGGTS 424 TSS + T + T+ T+S PVV + S +A IPG ++ Sbjct: 398 TSSTSLSSSTISTSASTSDTTSVTSSETTPVVTPSSLS----SAITIPGDST 445
>BSN_RAT (O88778) Bassoon protein| Length = 3937 Score = 29.6 bits (65), Expect = 9.6 Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 2/86 (2%) Frame = +2 Query: 200 HERSSFGPEFEATHEAITSTSALTSSGTCVRRTPESVPKVVPTSLATASHG--VPVVRFA 373 HE S+ A A++S T S V+ PE +P+V P TA+ V +VR+ Sbjct: 2638 HEASASSSAAAAAARAMSSVGIQTISDCSVQTEPEQLPRVSPAIHITAATDPKVEIVRYI 2697 Query: 374 RSSPPRLTASAIPGGTSGSTCCNGRP 451 S P T G S C P Sbjct: 2698 --SAPEKT------GRGESLACQTEP 2715
>RNF39_RAT (Q920M2) RING finger protein 39 (LTP-induced RING finger protein)| Length = 352 Score = 29.6 bits (65), Expect = 9.6 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%) Frame = +3 Query: 42 IPLIFGF--PGQYESRPLKIAPTCDPKFPLLIIP 137 + L+F F PG R + TCDP+ PL I+P Sbjct: 316 LDLLFAFQAPGPLGERVFPLLCTCDPRAPLRIVP 349
>CTPI_MYCTU (Q10900) Probable cation-transporting ATPase I (EC 3.6.3.-)| Length = 1625 Score = 29.6 bits (65), Expect = 9.6 Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 2/91 (2%) Frame = +2 Query: 143 VSKPRGSTLLFTSPSIVGSHERSSFGPEFEAT--HEAITSTSALTSSGTCVRRTPESVPK 316 V+ P +++LF +IV H R+ T H AI++ + + ++ R E K Sbjct: 912 VNDPDRASMLFEGSTIVAGHARAIVVATGVGTAAHRAISAVADVETAAGVQARLRELTSK 971 Query: 317 VVPTSLATASHGVPVVRFARSSPPRLTASAI 409 V+P +LA + + R+S + A + Sbjct: 972 VLPMTLAGGAAVTALALLRRASLRQAVADGV 1002
>CS007_HUMAN (Q9UPT8) Zinc finger CCCH-type domain-containing protein C19orf7| Length = 1303 Score = 29.6 bits (65), Expect = 9.6 Identities = 16/52 (30%), Positives = 23/52 (44%) Frame = +2 Query: 326 TSLATASHGVPVVRFARSSPPRLTASAIPGGTSGSTCCNGRP*SPGSERIDI 481 T A A G P R+ + PR A+A P T+ + G P PG + + Sbjct: 1201 TGKAGADGGTPTDRYNSYNRPRPKAAAAPAATTATPPPEGAPPQPGVHNLPV 1252
>IPL1_CANAL (Q59S66) Spindle assembly checkpoint kinase (EC 2.7.11.1) (Aurora| kinase) Length = 530 Score = 29.6 bits (65), Expect = 9.6 Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 19/132 (14%) Frame = +2 Query: 95 SPDMRSKISIT---HNSSVVSKPRGSTLLFTSPSI-------------VGSHERSSFGPE 226 +P++ + + T ++SS S S+LL +SP + SH R++ + Sbjct: 91 NPNLNTSLVFTPTKNSSSSSSSSHSSSLLSSSPFVEEPENQPESNHTRATSHYRTTSTSQ 150 Query: 227 FEATHEAITSTSALTSS--GTCVRRTPESV-PKVVPTSLATASHGVPVVRFARSSPPRLT 397 ++++ S S +TSS T ++T ES PK T+ AT + + S + Sbjct: 151 YKSSANKDASHSLITSSKRKTSTKQTSESTNPKRRTTTTATQNTNNNKILNPSLSSSTIR 210 Query: 398 ASAIPGGTSGST 433 S + TS ST Sbjct: 211 FSTVSSSTSSST 222
>GIDA_CHLAB (Q5L6Z0) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 611 Score = 29.6 bits (65), Expect = 9.6 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = +2 Query: 311 PKVVPTSLATASHGVPVVRFARSSPPRLTASAI 409 P SLA G P+ R +PPRL AS+I Sbjct: 179 PAATGLSLALKERGFPISRLKTGTPPRLLASSI 211 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 99,461,643 Number of Sequences: 219361 Number of extensions: 2103461 Number of successful extensions: 6349 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 6100 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6339 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7252940416 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)