ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal32p05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MUC1_YEAST (P08640) Mucin-like protein 1 precursor 37 0.060
2MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, trac... 33 0.87
3YLU2_PICAN (P34735) Hypothetical protein in LEU2 3'region (Fragm... 33 0.87
4POLN_SPDV (Q8JJX1) Nonstructural polyprotein (Polyprotein nsP123... 33 0.87
5SP96_DICDI (P14328) Spore coat protein SP96 32 1.5
6PME17_CHICK (Q98917) Melanocyte protein Pmel 17 precursor (115 k... 32 1.5
7NAS34_CAEEL (Q21059) Zinc metalloproteinase nas-34 precursor (EC... 32 1.9
8CAPB_BACSU (P96736) PGA synthase capB (EC 6.3.2.-) (Gamma-polygl... 32 1.9
9XYNA_PSEFL (P14768) Endo-1,4-beta-xylanase A precursor (EC 3.2.1... 32 1.9
10MAP4_MOUSE (P27546) Microtubule-associated protein 4 (MAP 4) 32 1.9
11CLAP1_HUMAN (Q7Z460) CLIP-associating protein 1 (Cytoplasmic lin... 32 2.5
12HXA9_MORSA (Q9PWD5) Homeobox protein Hox-A9 32 2.5
13Y3535_METJA (Q60291) Hypothetical protein MJECL35 31 3.3
14WSC2_YEAST (P53832) Cell wall integrity and stress response comp... 30 5.6
15CHI3_CANAL (P40954) Chitinase 3 precursor (EC 3.2.1.14) 30 7.3
16BSN_RAT (O88778) Bassoon protein 30 9.6
17RNF39_RAT (Q920M2) RING finger protein 39 (LTP-induced RING fing... 30 9.6
18CTPI_MYCTU (Q10900) Probable cation-transporting ATPase I (EC 3.... 30 9.6
19CS007_HUMAN (Q9UPT8) Zinc finger CCCH-type domain-containing pro... 30 9.6
20IPL1_CANAL (Q59S66) Spindle assembly checkpoint kinase (EC 2.7.1... 30 9.6
21GIDA_CHLAB (Q5L6Z0) tRNA uridine 5-carboxymethylaminomethyl modi... 30 9.6

>MUC1_YEAST (P08640) Mucin-like protein 1 precursor|
          Length = 1367

 Score = 37.0 bits (84), Expect = 0.060
 Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 7/118 (5%)
 Frame = +2

Query: 119 SITHNSSV-VSKPRGSTLLFTSPSIVGSHERSSFGPEFEATHEA----ITSTSALTSSGT 283
           S T +SS  V  P  ST   +S  +  S   SS  P   +T E+    +TS++  +SS  
Sbjct: 386 STTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAP 445

Query: 284 CVRRTPE--SVPKVVPTSLATASHGVPVVRFARSSPPRLTASAIPGGTSGSTCCNGRP 451
               T E  S P   P+S  T S   PV     SS    +++ +P  +S +T  +  P
Sbjct: 446 VTSSTTESSSAPVPTPSSSTTESSSAPVT----SSTTESSSAPVPTPSSSTTESSSAP 499



 Score = 30.8 bits (68), Expect = 4.3
 Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 10/115 (8%)
 Frame = +2

Query: 119 SITHNSSV-VSKPRGSTLLFTSPSIVGSHERSSFGP-------EFEATHEAITSTSALTS 274
           S T +SS  V  P  ST   +S  +  S   SS  P         E++   +TS++  +S
Sbjct: 320 STTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESS 379

Query: 275 SGTCVRRTPE--SVPKVVPTSLATASHGVPVVRFARSSPPRLTASAIPGGTSGST 433
           S      T E  S P   P+S  T S   PV     SS    +++ +   T+ S+
Sbjct: 380 SAPVTSSTTESSSAPVPTPSSSTTESSSAPVT----SSTTESSSAPVTSSTTESS 430



 Score = 29.6 bits (65), Expect = 9.6
 Identities = 40/151 (26%), Positives = 58/151 (38%), Gaps = 17/151 (11%)
 Frame = +2

Query: 119  SITHNSSV-VSKPRGSTLLFTS---PSIVGSHERSSFGPEFEATHEAITSTSALTSSGTC 286
            S T +SS  V  P  ST   +S   P+   S   SS  P    +  +  ++SA +S+   
Sbjct: 770  STTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSVAPVPTPSSSSNITSSAPSSTPFS 829

Query: 287  VRRTPESVPKVVPTSLATASHGVPVVRFAR----------SSPPRLTASA---IPGGTSG 427
                  SVP   P+S  T S   PV               SS   +T+SA   IP  ++ 
Sbjct: 830  SSTESSSVPVPTPSSSTTESSSAPVSSSTTESSVAPVPTPSSSSNITSSAPSSIPFSSTT 889

Query: 428  STCCNGRP*SPGSERIDISSSELMADSELST 520
             +   G   +P S +   S +E    S   T
Sbjct: 890  ESFSTGTTVTPSSSKYPGSQTETSVSSTTET 920



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>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)|
            (High molecular weight salivary mucin MG1) (Sublingual
            gland mucin)
          Length = 5703

 Score = 33.1 bits (74), Expect = 0.87
 Identities = 22/103 (21%), Positives = 47/103 (45%)
 Frame = +2

Query: 125  THNSSVVSKPRGSTLLFTSPSIVGSHERSSFGPEFEATHEAITSTSALTSSGTCVRRTPE 304
            T +++ +S   G+T + T PS   +    +      ++ +A   T  ++++ T    T  
Sbjct: 4375 TGSTATLSSTPGTTWILTEPSTTATVTVPTGSTATASSTQATAGTPHVSTTATTPTVTSS 4434

Query: 305  SVPKVVPTSLATASHGVPVVRFARSSPPRLTASAIPGGTSGST 433
               K  P+S    +  +P +R   ++P   + +AIP  + G+T
Sbjct: 4435 ---KATPSSSPGTATALPALRSTATTPTATSFTAIPSSSLGTT 4474



 Score = 33.1 bits (74), Expect = 0.87
 Identities = 22/103 (21%), Positives = 46/103 (44%)
 Frame = +2

Query: 125  THNSSVVSKPRGSTLLFTSPSIVGSHERSSFGPEFEATHEAITSTSALTSSGTCVRRTPE 304
            T +++  S   G+T + T P+   +   S+      ++ +A   T  ++++ T    T  
Sbjct: 1892 TSSTATPSSTPGTTWILTKPTTTATTTASTGSTATASSTQATAGTPHVSTTATTPTVTSS 1951

Query: 305  SVPKVVPTSLATASHGVPVVRFARSSPPRLTASAIPGGTSGST 433
               K  P S    +  +P +R   ++P   + +AIP  + G+T
Sbjct: 1952 ---KATPFSSPGTATALPALRSTATTPTATSFTAIPSSSLGTT 1991



 Score = 30.0 bits (66), Expect = 7.3
 Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 7/102 (6%)
 Frame = +2

Query: 146  SKPRGSTLLFTSPSIV-------GSHERSSFGPEFEATHEAITSTSALTSSGTCVRRTPE 304
            S   G+T + T PS         GS   +S       T + +TST A T +    R TP 
Sbjct: 3126 SSTPGTTWILTEPSTTATVTVPTGSTATASSTRATAGTLKVLTST-ATTPTVISSRATPS 3184

Query: 305  SVPKVVPTSLATASHGVPVVRFARSSPPRLTASAIPGGTSGS 430
            S P       ATA   +P +R   ++P   + +AIP  + G+
Sbjct: 3185 SSP-----GTATA---LPALRSTATTPTATSVTAIPSSSLGT 3218



 Score = 30.0 bits (66), Expect = 7.3
 Identities = 26/111 (23%), Positives = 44/111 (39%), Gaps = 17/111 (15%)
 Frame = +2

Query: 152  PRGSTLLFTSPSIVGSHERSSFGPEFEATHEAITST--------------SALTSSGTCV 289
            P+  T   T+P+   S   SS  P    T   +TST              S L ++GT  
Sbjct: 2994 PKVLTSQATTPTATSSKATSSSSPRTATTLPVLTSTATKSTATSFTPIPSSTLGTTGTSQ 3053

Query: 290  RRTPE---SVPKVVPTSLATASHGVPVVRFARSSPPRLTASAIPGGTSGST 433
             R P    ++  + P+S    +H   V+    ++    ++ + P  T G+T
Sbjct: 3054 NRPPHPMATMSTIHPSSTPETTHTSTVLTTKATTTRATSSMSTPSSTPGTT 3104



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>YLU2_PICAN (P34735) Hypothetical protein in LEU2 3'region (Fragment)|
          Length = 373

 Score = 33.1 bits (74), Expect = 0.87
 Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 3/124 (2%)
 Frame = +2

Query: 80  SAIKNSPDMRSKISITHNSSVVSKPRGSTLLFTSPSIVGSHERSSFGPEFEATHEAITST 259
           S   +S    S  S + +S   S P+ ST+  T  S   S   +S       T  +I+S 
Sbjct: 129 STTSSSSSSLSSSSTSSSSKQSSSPQSSTMSSTDSSPTSSSLSAS-----STTTSSISSF 183

Query: 260 S---ALTSSGTCVRRTPESVPKVVPTSLATASHGVPVVRFARSSPPRLTASAIPGGTSGS 430
           S   + +SS T    TP S    + TS++  +    ++   +S     +ASA    +S S
Sbjct: 184 SFSQSSSSSSTTSSSTPSSESVRITTSVSPGNMQTSIIYITQSVATATSASAAASSSSAS 243

Query: 431 TCCN 442
           +  N
Sbjct: 244 SANN 247



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>POLN_SPDV (Q8JJX1) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
            [Contains: P123; mRNA capping enzyme nsP1 (EC 2.1.1.-)
            (EC 2.7.7.-) (Nonstructural protein 1);
            Protease/triphosphatase/NTPase/helicase nsP2 (EC
            3.4.22.-) (EC 3.1.3.33) (EC 3.6.1.1
          Length = 2601

 Score = 33.1 bits (74), Expect = 0.87
 Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
 Frame = +2

Query: 230  EATHEAITSTSALTSSGTCVRRTPESVPKVVPTSLATASHGVPVVRFARSSPPRLTASA- 406
            E+    + S S++TSS   V   P   P V   SLA+++H     R  RS+P    ASA 
Sbjct: 1817 ESRSSRMGSQSSVTSSAGSVPPAPRRAPAVSAASLASSAHS----RSVRSAPAMRAASAG 1872

Query: 407  ---IPGGTSGST 433
               +    SGST
Sbjct: 1873 ARSVRSAQSGST 1884



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>SP96_DICDI (P14328) Spore coat protein SP96|
          Length = 600

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 29/109 (26%), Positives = 46/109 (42%)
 Frame = +2

Query: 80  SAIKNSPDMRSKISITHNSSVVSKPRGSTLLFTSPSIVGSHERSSFGPEFEATHEAITST 259
           SA  +SP   +  S   +S+  S P  S    +SPS   S   SS  P   A+  +  S+
Sbjct: 463 SAASSSPSSSAASSSPSSSAASSSPSSSASSSSSPS---SSASSSSAPSSSASSSSAPSS 519

Query: 260 SALTSSGTCVRRTPESVPKVVPTSLATASHGVPVVRFARSSPPRLTASA 406
           SA +SS +    +  S      T++AT +        A ++    T +A
Sbjct: 520 SASSSSAS--SSSASSAATTAATTIATTAATTTATTTATTATTTATTTA 566



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>PME17_CHICK (Q98917) Melanocyte protein Pmel 17 precursor (115 kDa melanosomal|
           matrix protein)
          Length = 763

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
 Frame = +2

Query: 140 VVSKPRGSTLLFTSPSIVGSHERSSFGPEFEATHEAITSTSALTSSGTCVRRTPESVPKV 319
           V +   G+T    +    G+ +  + GP   AT E+I   +A  + G  V  T ES+   
Sbjct: 445 VAAATPGATAADVAVDTAGATDGDAVGPTAAATAESIADPTAGATDGDAVGATAESIAD- 503

Query: 320 VPTSLATASHGVPVVRFARS---SPPRLTASAIPGG--TSGST 433
            PT+ AT    V     A +   + P   A+A+  G  T+G+T
Sbjct: 504 -PTAGATDGDAVGPTAAATAESIADPTAGATAVSSGSATAGAT 545



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>NAS34_CAEEL (Q21059) Zinc metalloproteinase nas-34 precursor (EC 3.4.24.21)|
           (Nematode astacin 34) (Defective hatching protein 1)
          Length = 605

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 21/62 (33%), Positives = 29/62 (46%)
 Frame = +2

Query: 254 STSALTSSGTCVRRTPESVPKVVPTSLATASHGVPVVRFARSSPPRLTASAIPGGTSGST 433
           STSA T++ T     P +VP V PT+  T          AR+S    T  A P  T+ ++
Sbjct: 474 STSAPTTTSTTTTTAPITVPTVSPTTTTTRQ----TTTTARTSTTTTTTQAPPTTTTSTS 529

Query: 434 CC 439
            C
Sbjct: 530 QC 531



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>CAPB_BACSU (P96736) PGA synthase capB (EC 6.3.2.-) (Gamma-polyglutamic acid|
           synthase)
          Length = 393

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = -3

Query: 390 RGGELLANLTTGTPWEAVAKEVGTTFGTDSGVLRTQVPED 271
           RG   +  LTTG   EA  K VG T GTD+ ++    PE+
Sbjct: 39  RGKSTVTRLTTGILIEAGYKTVGKTTGTDARMIYWDTPEE 78



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>XYNA_PSEFL (P14768) Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) (Xylanase|
           A) (1,4-beta-D-xylan xylanohydrolase A) (XYLA)
          Length = 611

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 28/83 (33%), Positives = 41/83 (49%)
 Frame = +2

Query: 194 GSHERSSFGPEFEATHEAITSTSALTSSGTCVRRTPESVPKVVPTSLATASHGVPVVRFA 373
           GS ER S G    +   A +S  A +   +    +P SV   V +S+A++S   PV   +
Sbjct: 113 GSAERPSVGGSICSGSVASSSAPASSVPSSIASSSPSSVASSVISSMASSS---PV---S 166

Query: 374 RSSPPRLTASAIPGGTSGSTCCN 442
            SS     AS+ PG +SG+  CN
Sbjct: 167 SSS----VASSTPGSSSGNQQCN 185



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>MAP4_MOUSE (P27546) Microtubule-associated protein 4 (MAP 4)|
          Length = 1125

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
 Frame = +2

Query: 176  TSPSIVGSHERSSFGPEFEATHEAITSTSALTSSGTCVRRTPESVPKVVPTSLATASHGV 355
            TSPS   S      GP+   T    TS S L S+G   R    ++PK  PTS+ T     
Sbjct: 759  TSPSKPSSAPALKPGPKTTPTVSKATSPSTLVSTGPSSRSPATTLPK-RPTSIKTEGKPA 817

Query: 356  PVVRF-ARSSPPRLTASAIPGGTS 424
             V R  A+S+   L+ S     +S
Sbjct: 818  DVKRMTAKSASADLSRSKTTSASS 841



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>CLAP1_HUMAN (Q7Z460) CLIP-associating protein 1 (Cytoplasmic linker-associated|
           protein 1) (Multiple asters homolog 1)
          Length = 1538

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 36/126 (28%), Positives = 54/126 (42%), Gaps = 4/126 (3%)
 Frame = +2

Query: 107 RSKISITHNSSVVSKPRGSTLLFTSPSIVGSHERSSFGPEFEATHEAITSTSALTSSGTC 286
           RS+  I  N++  +K + S+   T+P        ++  P   A+   I +    + S T 
Sbjct: 597 RSRSDIDVNAAASAKSKVSSSSGTTPF----SSAAALPPGSYASLGRIRTRRQSSGSATN 652

Query: 287 VRRTPE----SVPKVVPTSLATASHGVPVVRFARSSPPRLTASAIPGGTSGSTCCNGRP* 454
           V  TP+    S  KVV  S  + S          SSP +L  S   G T GS+   G P 
Sbjct: 653 VASTPDNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLTGGSS--RGPPV 710

Query: 455 SPGSER 472
           +P SE+
Sbjct: 711 TPSSEK 716



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>HXA9_MORSA (Q9PWD5) Homeobox protein Hox-A9|
          Length = 269

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +3

Query: 270 HPQGPVFAERQSRCQKWYLPP*Q-QPPMACLL*DLPGVHLHG 392
           HPQGPV A+   R Q W L P     PMA     LP  H +G
Sbjct: 86  HPQGPVGADTDGRYQSWLLEPMSGSLPMA----GLPTTHHYG 123



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>Y3535_METJA (Q60291) Hypothetical protein MJECL35|
          Length = 630

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 18/48 (37%), Positives = 27/48 (56%)
 Frame = -3

Query: 654 VKGREDFIPKPEETRRLIKSYYGISRNLLIKFEDDQIDETSIIAQVLS 511
           +KG  D   +P+ T  L KSY G+S N  +    DQI +  I+A ++S
Sbjct: 256 IKGSVDTYEQPDRTEILTKSYEGMSLNYELFGSGDQIID-GILASIIS 302



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>WSC2_YEAST (P53832) Cell wall integrity and stress response component 2|
           precursor
          Length = 503

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 28/115 (24%), Positives = 48/115 (41%)
 Frame = +2

Query: 89  KNSPDMRSKISITHNSSVVSKPRGSTLLFTSPSIVGSHERSSFGPEFEATHEAITSTSAL 268
           K S  + +K S T +S+  S    ST   TS +   S   +S      ++  + TST++ 
Sbjct: 146 KTSTKLDTKTS-TSSSATHSSSSSST---TSTTTSSSETTTSSSSSSSSSSTSTTSTTST 201

Query: 269 TSSGTCVRRTPESVPKVVPTSLATASHGVPVVRFARSSPPRLTASAIPGGTSGST 433
           TSS T    +P +       S ++ +        + +S    T++A    T  ST
Sbjct: 202 TSSTTSTSSSPSTTSSSTSASSSSETSSTQATSSSTTSTSSSTSTATVTSTPSST 256



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>CHI3_CANAL (P40954) Chitinase 3 precursor (EC 3.2.1.14)|
          Length = 567

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 34/112 (30%), Positives = 48/112 (42%), Gaps = 1/112 (0%)
 Frame = +2

Query: 92  NSPDMRSKISITHN-SSVVSKPRGSTLLFTSPSIVGSHERSSFGPEFEATHEAITSTSAL 268
           +S    SK S T   SS +S    ST   TS S   S   S+      ++  + TST A 
Sbjct: 339 SSSSKTSKTSTTSTTSSSISSTTSSTTSSTSSSSTSSSTSSTTSSSTTSSQISTTST-AP 397

Query: 269 TSSGTCVRRTPESVPKVVPTSLATASHGVPVVRFARSSPPRLTASAIPGGTS 424
           TSS +    T  +      T+  T+S   PVV  +  S    +A  IPG ++
Sbjct: 398 TSSTSLSSSTISTSASTSDTTSVTSSETTPVVTPSSLS----SAITIPGDST 445



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>BSN_RAT (O88778) Bassoon protein|
          Length = 3937

 Score = 29.6 bits (65), Expect = 9.6
 Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
 Frame = +2

Query: 200  HERSSFGPEFEATHEAITSTSALTSSGTCVRRTPESVPKVVPTSLATASHG--VPVVRFA 373
            HE S+      A   A++S    T S   V+  PE +P+V P    TA+    V +VR+ 
Sbjct: 2638 HEASASSSAAAAAARAMSSVGIQTISDCSVQTEPEQLPRVSPAIHITAATDPKVEIVRYI 2697

Query: 374  RSSPPRLTASAIPGGTSGSTCCNGRP 451
              S P  T      G   S  C   P
Sbjct: 2698 --SAPEKT------GRGESLACQTEP 2715



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>RNF39_RAT (Q920M2) RING finger protein 39 (LTP-induced RING finger protein)|
          Length = 352

 Score = 29.6 bits (65), Expect = 9.6
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = +3

Query: 42  IPLIFGF--PGQYESRPLKIAPTCDPKFPLLIIP 137
           + L+F F  PG    R   +  TCDP+ PL I+P
Sbjct: 316 LDLLFAFQAPGPLGERVFPLLCTCDPRAPLRIVP 349



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>CTPI_MYCTU (Q10900) Probable cation-transporting ATPase I (EC 3.6.3.-)|
          Length = 1625

 Score = 29.6 bits (65), Expect = 9.6
 Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
 Frame = +2

Query: 143  VSKPRGSTLLFTSPSIVGSHERSSFGPEFEAT--HEAITSTSALTSSGTCVRRTPESVPK 316
            V+ P  +++LF   +IV  H R+        T  H AI++ + + ++     R  E   K
Sbjct: 912  VNDPDRASMLFEGSTIVAGHARAIVVATGVGTAAHRAISAVADVETAAGVQARLRELTSK 971

Query: 317  VVPTSLATASHGVPVVRFARSSPPRLTASAI 409
            V+P +LA  +    +    R+S  +  A  +
Sbjct: 972  VLPMTLAGGAAVTALALLRRASLRQAVADGV 1002



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>CS007_HUMAN (Q9UPT8) Zinc finger CCCH-type domain-containing protein C19orf7|
          Length = 1303

 Score = 29.6 bits (65), Expect = 9.6
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = +2

Query: 326  TSLATASHGVPVVRFARSSPPRLTASAIPGGTSGSTCCNGRP*SPGSERIDI 481
            T  A A  G P  R+   + PR  A+A P  T+ +    G P  PG   + +
Sbjct: 1201 TGKAGADGGTPTDRYNSYNRPRPKAAAAPAATTATPPPEGAPPQPGVHNLPV 1252



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>IPL1_CANAL (Q59S66) Spindle assembly checkpoint kinase (EC 2.7.11.1) (Aurora|
           kinase)
          Length = 530

 Score = 29.6 bits (65), Expect = 9.6
 Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 19/132 (14%)
 Frame = +2

Query: 95  SPDMRSKISIT---HNSSVVSKPRGSTLLFTSPSI-------------VGSHERSSFGPE 226
           +P++ + +  T   ++SS  S    S+LL +SP +               SH R++   +
Sbjct: 91  NPNLNTSLVFTPTKNSSSSSSSSHSSSLLSSSPFVEEPENQPESNHTRATSHYRTTSTSQ 150

Query: 227 FEATHEAITSTSALTSS--GTCVRRTPESV-PKVVPTSLATASHGVPVVRFARSSPPRLT 397
           ++++     S S +TSS   T  ++T ES  PK   T+ AT +     +     S   + 
Sbjct: 151 YKSSANKDASHSLITSSKRKTSTKQTSESTNPKRRTTTTATQNTNNNKILNPSLSSSTIR 210

Query: 398 ASAIPGGTSGST 433
            S +   TS ST
Sbjct: 211 FSTVSSSTSSST 222



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>GIDA_CHLAB (Q5L6Z0) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 611

 Score = 29.6 bits (65), Expect = 9.6
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +2

Query: 311 PKVVPTSLATASHGVPVVRFARSSPPRLTASAI 409
           P     SLA    G P+ R    +PPRL AS+I
Sbjct: 179 PAATGLSLALKERGFPISRLKTGTPPRLLASSI 211


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,461,643
Number of Sequences: 219361
Number of extensions: 2103461
Number of successful extensions: 6349
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 6100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6339
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7252940416
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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