ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal32p05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK101565.1| Oryza sativa (japonica cultivar-group) cDNA clon... 442 e-121
2dbj|AK068579.1| Oryza sativa (japonica cultivar-group) cDNA clon... 442 e-121
3ref|XM_472392.1| Oryza sativa (japonica cultivar-group), predic... 402 e-109
4emb|AL731639.3|OSJN00288 Oryza sativa genomic DNA, chromosome 4,... 174 3e-40
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 174 3e-40
6ref|NM_124160.2| Arabidopsis thaliana unknown protein AT5G47860 ... 66 2e-07
7gb|AY142015.1| Arabidopsis thaliana At5g47860/MCA23_20 mRNA, com... 66 2e-07
8gb|AY058159.1| Arabidopsis thaliana AT5g47860/MCA23_20 mRNA, com... 66 2e-07
9emb|BX832182.1|CNS09ZRY Arabidopsis thaliana Full-length cDNA Co... 66 2e-07
10emb|BX832080.1|CNS09ZUF Arabidopsis thaliana Full-length cDNA Co... 66 2e-07
11emb|BX831123.1|CNS09ZHA Arabidopsis thaliana Full-length cDNA Co... 58 4e-05
12emb|BX832126.1|CNS09ZKJ Arabidopsis thaliana Full-length cDNA Co... 52 0.003
13dbj|AB016886.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 50 0.010
14emb|CR538724.4| Mouse DNA sequence from clone RP23-81N12 on chro... 44 0.63
15gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome 44 0.63
16ref|NM_127834.2| Arabidopsis thaliana ubiquitin-protein ligase/ ... 40 9.8
17ref|NM_001036320.1| Arabidopsis thaliana ubiquitin-protein ligas... 40 9.8
18gb|BC065522.1| Homo sapiens vascular endothelial growth factor, ... 40 9.8
19gb|AC124103.5| Mus musculus chromosome 15, clone RP24-271M13, co... 40 9.8
20ref|NM_001025369.1| Homo sapiens vascular endothelial growth fac... 40 9.8
21ref|NM_001025370.1| Homo sapiens vascular endothelial growth fac... 40 9.8
22ref|NM_001033756.1| Homo sapiens vascular endothelial growth fac... 40 9.8
23ref|NM_001025368.1| Homo sapiens vascular endothelial growth fac... 40 9.8
24ref|NM_001025366.1| Homo sapiens vascular endothelial growth fac... 40 9.8
25ref|NM_003376.4| Homo sapiens vascular endothelial growth factor... 40 9.8
26ref|NM_001025367.1| Homo sapiens vascular endothelial growth fac... 40 9.8
27gb|AC136956.4| Oryza sativa (japonica cultivar-group) chromosome... 40 9.8
28gb|AC122182.4| Mus musculus BAC clone RP23-12G9 from 1, complete... 40 9.8
29gb|AC110813.4| Homo sapiens BAC clone RP11-1336O20 from 4, compl... 40 9.8
30emb|AL139006.13| Human DNA sequence from clone RP11-30E17 on chr... 40 9.8
31emb|AL136131.15| Human DNA sequence from clone RP1-261G23 on chr... 40 9.8
32emb|CR592173.1| full-length cDNA clone CS0DD004YC18 of Neuroblas... 40 9.8
33dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, comple... 40 9.8
34gb|AC006340.5| Arabidopsis thaliana chromosome 2 clone T9I22 map... 40 9.8
35gb|AF437895.1|AF437895 Homo sapiens vascular endothelial growth ... 40 9.8
36emb|BX248329.10| Zebrafish DNA sequence from clone CH211-206P14,... 40 9.8
37gb|DQ059108.1| Arabidopsis thaliana RING finger family protein (... 40 9.8
38dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
39emb|BX820269.1|CNS0A80V Arabidopsis thaliana Full-length cDNA Co... 40 9.8
40gb|AY087983.1| Arabidopsis thaliana clone 4014 mRNA, complete se... 40 9.8
41gb|AC023701.4| Drosophila melanogaster X BAC RP98-29B16 (Roswell... 40 9.8
42gb|AC023695.4| Drosophila melanogaster X BAC RP98-25I9 (Roswell ... 40 9.8
43dbj|AK098750.1| Homo sapiens cDNA FLJ25884 fis, clone CBR02931 40 9.8
44gb|AF024710.1|AF024710 Homo sapiens vascular endothelial growth ... 40 9.8
45gb|AE003432.5| Drosophila melanogaster chromosome X, section 16 ... 40 9.8
46gb|AE015927.1| Clostridium tetani E88, complete genome 40 9.8
47gb|U72723.1|OLU72723 Oryza longistaminata receptor kinase-like p... 40 9.8
48gb|AF022375.1|AF022375 Homo sapiens vascular endothelial growth ... 40 9.8
49gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.8
50emb|CT009664.17| Pig DNA sequence from clone CH242-113D8 on chro... 40 9.8
51gb|BC058855.1| Homo sapiens cDNA clone IMAGE:5313912, containing... 40 9.8
52dbj|AB209485.1| Homo sapiens mRNA for vascular endothelial growt... 40 9.8
53emb|Y08736.1|HSVEGF3UT H.sapiens vegf gene, 3'UTR 40 9.8 
>dbj|AK101565.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050E24, full
            insert sequence
          Length = 1998

 Score =  442 bits (223), Expect = e-121
 Identities = 442/515 (85%)
 Strand = Plus / Minus

                                                                        
Query: 199  tcatgaacgaagtagttttgggccagagtttgaagctacccatgaagcaattacatccac 258
            |||||||||||||| | |||| ||||| |||||  | | ||||||| ||||||| || ||
Sbjct: 1461 tcatgaacgaagtaatcttggaccagaatttgactcaatccatgaaacaattacgtcaac 1402

                                                                        
Query: 259  aagtgcattgacatcctcagggacctgtgttcgcagaacgccagagtcggtgccaaaagt 318
            ||||| |||||||||||  | ||  |||| ||| |||||||| || || |  || |||||
Sbjct: 1401 aagtgtattgacatcctttgagatttgtgctcgtagaacgcccgaatccgcacctaaagt 1342

                                                                        
Query: 319  ggtacctacctccttagcaacagcctcccatggcgtgcctgttgtaagatttgccaggag 378
            | ||||||||||||||||||||||||||||||| || |||||||  ||||||| ||||||
Sbjct: 1341 gctacctacctccttagcaacagcctcccatggtgtccctgttgctagatttgtcaggag 1282

                                                                        
Query: 379  ttcacctccacggctcactgcatcagccattcctggtggaacgtcaggaagtacctgttg 438
            ||||||||| | | | |||||||| |||||| |||||||||| |||||||||||||| ||
Sbjct: 1281 ttcacctcctctgtttactgcatcggccattgctggtggaacatcaggaagtacctgctg 1222

                                                                        
Query: 439  taatggaaggccatgatccccaggaagtgaacgaatcgacatatcaagcagtgagctaat 498
            ||| || || |||||||| ||||||||||| ||||| ||||| |||||||||||||||||
Sbjct: 1221 taacggtagtccatgatctccaggaagtgaccgaattgacatgtcaagcagtgagctaat 1162

                                                                        
Query: 499  ggcagattcagagcttagtacttgtgcaatgatggaggtttcatcaatttgatcatcttc 558
            ||||||||| |||||||||||||| ||||  || || |||||||||||||||||||||| 
Sbjct: 1161 ggcagattcggagcttagtacttgcgcaagaatagatgtttcatcaatttgatcatcttt 1102

                                                                        
Query: 559  gaactttataaggagatttcgagatattccgtagtaggattttattagccggcgtgtctc 618
            ||||||||| | ||| |||||||| || || |||||||||||||  ||||| ||||||||
Sbjct: 1101 gaactttatcaagaggtttcgagaaatcccatagtaggattttaccagccgacgtgtctc 1042

                                                                        
Query: 619  ctctggttttggaatgaagtcttctcggccctttactaagtccatatacagtggaggaag 678
             ||||| ||||||| ||| ||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 1041 ttctggctttggaacgaattcttctcggccttttactaaatccatatacagtggaggaag 982

                                               
Query: 679  ttgttgaattaagggaagaagctgcttaacaacag 713
            ||| |||| ||| || || ||||||||||||||||
Sbjct: 981  ttgctgaactaatggcaggagctgcttaacaacag 947
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>dbj|AK068579.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157C11, full
            insert sequence
          Length = 2126

 Score =  442 bits (223), Expect = e-121
 Identities = 442/515 (85%)
 Strand = Plus / Minus

                                                                        
Query: 199  tcatgaacgaagtagttttgggccagagtttgaagctacccatgaagcaattacatccac 258
            |||||||||||||| | |||| ||||| |||||  | | ||||||| ||||||| || ||
Sbjct: 1500 tcatgaacgaagtaatcttggaccagaatttgactcaatccatgaaacaattacgtcaac 1441

                                                                        
Query: 259  aagtgcattgacatcctcagggacctgtgttcgcagaacgccagagtcggtgccaaaagt 318
            ||||| |||||||||||  | ||  |||| ||| |||||||| || || |  || |||||
Sbjct: 1440 aagtgtattgacatcctttgagatttgtgctcgtagaacgcccgaatccgcacctaaagt 1381

                                                                        
Query: 319  ggtacctacctccttagcaacagcctcccatggcgtgcctgttgtaagatttgccaggag 378
            | ||||||||||||||||||||||||||||||| || |||||||  ||||||| ||||||
Sbjct: 1380 gctacctacctccttagcaacagcctcccatggtgtccctgttgctagatttgtcaggag 1321

                                                                        
Query: 379  ttcacctccacggctcactgcatcagccattcctggtggaacgtcaggaagtacctgttg 438
            ||||||||| | | | |||||||| |||||| |||||||||| |||||||||||||| ||
Sbjct: 1320 ttcacctcctctgtttactgcatcggccattgctggtggaacatcaggaagtacctgctg 1261

                                                                        
Query: 439  taatggaaggccatgatccccaggaagtgaacgaatcgacatatcaagcagtgagctaat 498
            ||| || || |||||||| ||||||||||| ||||| ||||| |||||||||||||||||
Sbjct: 1260 taacggtagtccatgatctccaggaagtgaccgaattgacatgtcaagcagtgagctaat 1201

                                                                        
Query: 499  ggcagattcagagcttagtacttgtgcaatgatggaggtttcatcaatttgatcatcttc 558
            ||||||||| |||||||||||||| ||||  || || |||||||||||||||||||||| 
Sbjct: 1200 ggcagattcggagcttagtacttgcgcaagaatagatgtttcatcaatttgatcatcttt 1141

                                                                        
Query: 559  gaactttataaggagatttcgagatattccgtagtaggattttattagccggcgtgtctc 618
            ||||||||| | ||| |||||||| || || |||||||||||||  ||||| ||||||||
Sbjct: 1140 gaactttatcaagaggtttcgagaaatcccatagtaggattttaccagccgacgtgtctc 1081

                                                                        
Query: 619  ctctggttttggaatgaagtcttctcggccctttactaagtccatatacagtggaggaag 678
             ||||| ||||||| ||| ||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 1080 ttctggctttggaacgaattcttctcggccttttactaaatccatatacagtggaggaag 1021

                                               
Query: 679  ttgttgaattaagggaagaagctgcttaacaacag 713
            ||| |||| ||| || || ||||||||||||||||
Sbjct: 1020 ttgctgaactaatggcaggagctgcttaacaacag 986
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>ref|XM_472392.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 861

 Score =  402 bits (203), Expect = e-109
 Identities = 344/391 (87%)
 Strand = Plus / Minus

                                                                       
Query: 323 cctacctccttagcaacagcctcccatggcgtgcctgttgtaagatttgccaggagttca 382
           ||||||||||||||||||||||||||||| || |||||||  ||||||| ||||||||||
Sbjct: 671 cctacctccttagcaacagcctcccatggtgtccctgttgctagatttgtcaggagttca 612

                                                                       
Query: 383 cctccacggctcactgcatcagccattcctggtggaacgtcaggaagtacctgttgtaat 442
           ||||| | | | |||||||| |||||| |||||||||| |||||||||||||| ||||| 
Sbjct: 611 cctcctctgtttactgcatcggccattgctggtggaacatcaggaagtacctgctgtaac 552

                                                                       
Query: 443 ggaaggccatgatccccaggaagtgaacgaatcgacatatcaagcagtgagctaatggca 502
           || || |||||||| ||||||||||| ||||| ||||| |||||||||||||||||||||
Sbjct: 551 ggtagtccatgatctccaggaagtgaccgaattgacatgtcaagcagtgagctaatggca 492

                                                                       
Query: 503 gattcagagcttagtacttgtgcaatgatggaggtttcatcaatttgatcatcttcgaac 562
           ||||| |||||||||||||| ||||  || || |||||||||||||||||||||| ||||
Sbjct: 491 gattcggagcttagtacttgcgcaagaatagatgtttcatcaatttgatcatctttgaac 432

                                                                       
Query: 563 tttataaggagatttcgagatattccgtagtaggattttattagccggcgtgtctcctct 622
           ||||| | ||| |||||||| || || |||||||||||||  ||||| |||||||| |||
Sbjct: 431 tttatcaagaggtttcgagaaatcccatagtaggattttaccagccgacgtgtctcttct 372

                                                                       
Query: 623 ggttttggaatgaagtcttctcggccctttactaagtccatatacagtggaggaagttgt 682
           || ||||||| ||| ||||||||||| |||||||| ||||||||||||||||||||||| 
Sbjct: 371 ggctttggaacgaattcttctcggccttttactaaatccatatacagtggaggaagttgc 312

                                          
Query: 683 tgaattaagggaagaagctgcttaacaacag 713
           |||| ||| || || ||||||||||||||||
Sbjct: 311 tgaactaatggcaggagctgcttaacaacag 281
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>emb|AL731639.3|OSJN00288 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000315_02, complete
              sequence
          Length = 112404

 Score =  174 bits (88), Expect = 3e-40
 Identities = 151/172 (87%)
 Strand = Plus / Plus

                                                                          
Query: 431    acctgttgtaatggaaggccatgatccccaggaagtgaacgaatcgacatatcaagcagt 490
              ||||| ||||| || || |||||||| ||||||||||| ||||| ||||| |||||||||
Sbjct: 104175 acctgctgtaacggtagtccatgatctccaggaagtgaccgaattgacatgtcaagcagt 104234

                                                                          
Query: 491    gagctaatggcagattcagagcttagtacttgtgcaatgatggaggtttcatcaatttga 550
              ||||||||||||||||| |||||||||||||| ||||  || || |||||||||||||||
Sbjct: 104235 gagctaatggcagattcggagcttagtacttgcgcaagaatagatgtttcatcaatttga 104294

                                                                  
Query: 551    tcatcttcgaactttataaggagatttcgagatattccgtagtaggatttta 602
              ||||||| ||||||||| | ||| |||||||| || || |||||||||||||
Sbjct: 104295 tcatctttgaactttatcaagaggtttcgagaaatcccatagtaggatttta 104346



 Score =  168 bits (85), Expect = 2e-38
 Identities = 199/237 (83%)
 Strand = Plus / Plus

                                                                          
Query: 199    tcatgaacgaagtagttttgggccagagtttgaagctacccatgaagcaattacatccac 258
              |||||||||||||| | |||| ||||| |||||  | | ||||||| ||||||| || ||
Sbjct: 103764 tcatgaacgaagtaatcttggaccagaatttgactcaatccatgaaacaattacgtcaac 103823

                                                                          
Query: 259    aagtgcattgacatcctcagggacctgtgttcgcagaacgccagagtcggtgccaaaagt 318
              ||||| |||||||||||  | ||  |||| ||| |||||||| || || |  || |||||
Sbjct: 103824 aagtgtattgacatcctttgagatttgtgctcgtagaacgcccgaatccgcacctaaagt 103883

                                                                          
Query: 319    ggtacctacctccttagcaacagcctcccatggcgtgcctgttgtaagatttgccaggag 378
              | ||||||||||||||||||||||||||||||| || |||||||  ||||||| ||||||
Sbjct: 103884 gctacctacctccttagcaacagcctcccatggtgtccctgttgctagatttgtcaggag 103943

                                                                       
Query: 379    ttcacctccacggctcactgcatcagccattcctggtggaacgtcaggaagtacctg 435
              ||||||||| | | | |||||||| |||||| |||||||||| ||||||||||||||
Sbjct: 103944 ttcacctcctctgtttactgcatcggccattgctggtggaacatcaggaagtacctg 104000



 Score =  121 bits (61), Expect = 3e-24
 Identities = 97/109 (88%)
 Strand = Plus / Plus

                                                                          
Query: 605    agccggcgtgtctcctctggttttggaatgaagtcttctcggccctttactaagtccata 664
              ||||| |||||||| ||||| ||||||| ||| ||||||||||| |||||||| ||||||
Sbjct: 105965 agccgacgtgtctcttctggctttggaacgaattcttctcggccttttactaaatccata 106024

                                                               
Query: 665    tacagtggaggaagttgttgaattaagggaagaagctgcttaacaacag 713
              ||||||||||||||||| |||| ||| || || ||||||||||||||||
Sbjct: 106025 tacagtggaggaagttgctgaactaatggcaggagctgcttaacaacag 106073
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  174 bits (88), Expect = 3e-40
 Identities = 151/172 (87%)
 Strand = Plus / Plus

                                                                            
Query: 431      acctgttgtaatggaaggccatgatccccaggaagtgaacgaatcgacatatcaagcagt 490
                ||||| ||||| || || |||||||| ||||||||||| ||||| ||||| |||||||||
Sbjct: 20134270 acctgctgtaacggtagtccatgatctccaggaagtgaccgaattgacatgtcaagcagt 20134329

                                                                            
Query: 491      gagctaatggcagattcagagcttagtacttgtgcaatgatggaggtttcatcaatttga 550
                ||||||||||||||||| |||||||||||||| ||||  || || |||||||||||||||
Sbjct: 20134330 gagctaatggcagattcggagcttagtacttgcgcaagaatagatgtttcatcaatttga 20134389

                                                                    
Query: 551      tcatcttcgaactttataaggagatttcgagatattccgtagtaggatttta 602
                ||||||| ||||||||| | ||| |||||||| || || |||||||||||||
Sbjct: 20134390 tcatctttgaactttatcaagaggtttcgagaaatcccatagtaggatttta 20134441



 Score =  168 bits (85), Expect = 2e-38
 Identities = 199/237 (83%)
 Strand = Plus / Plus

                                                                            
Query: 199      tcatgaacgaagtagttttgggccagagtttgaagctacccatgaagcaattacatccac 258
                |||||||||||||| | |||| ||||| |||||  | | ||||||| ||||||| || ||
Sbjct: 20133859 tcatgaacgaagtaatcttggaccagaatttgactcaatccatgaaacaattacgtcaac 20133918

                                                                            
Query: 259      aagtgcattgacatcctcagggacctgtgttcgcagaacgccagagtcggtgccaaaagt 318
                ||||| |||||||||||  | ||  |||| ||| |||||||| || || |  || |||||
Sbjct: 20133919 aagtgtattgacatcctttgagatttgtgctcgtagaacgcccgaatccgcacctaaagt 20133978

                                                                            
Query: 319      ggtacctacctccttagcaacagcctcccatggcgtgcctgttgtaagatttgccaggag 378
                | ||||||||||||||||||||||||||||||| || |||||||  ||||||| ||||||
Sbjct: 20133979 gctacctacctccttagcaacagcctcccatggtgtccctgttgctagatttgtcaggag 20134038

                                                                         
Query: 379      ttcacctccacggctcactgcatcagccattcctggtggaacgtcaggaagtacctg 435
                ||||||||| | | | |||||||| |||||| |||||||||| ||||||||||||||
Sbjct: 20134039 ttcacctcctctgtttactgcatcggccattgctggtggaacatcaggaagtacctg 20134095



 Score =  121 bits (61), Expect = 3e-24
 Identities = 97/109 (88%)
 Strand = Plus / Plus

                                                                            
Query: 605      agccggcgtgtctcctctggttttggaatgaagtcttctcggccctttactaagtccata 664
                ||||| |||||||| ||||| ||||||| ||| ||||||||||| |||||||| ||||||
Sbjct: 20136060 agccgacgtgtctcttctggctttggaacgaattcttctcggccttttactaaatccata 20136119

                                                                 
Query: 665      tacagtggaggaagttgttgaattaagggaagaagctgcttaacaacag 713
                ||||||||||||||||| |||| ||| || || ||||||||||||||||
Sbjct: 20136120 tacagtggaggaagttgctgaactaatggcaggagctgcttaacaacag 20136168
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>ref|NM_124160.2| Arabidopsis thaliana unknown protein AT5G47860 mRNA, complete cds
          Length = 1501

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 108/133 (81%)
 Strand = Plus / Minus

                                                                        
Query: 536  gtttcatcaatttgatcatcttcgaactttataaggagatttcgagatattccgtagtag 595
            |||||||| |||  |||||| ||||| ||||| |  ||||| | ||| ||||| ||||||
Sbjct: 1052 gtttcatctattgaatcatcctcgaattttatcaacagattcctagagattccatagtag 993

                                                                        
Query: 596  gattttattagccggcgtgtctcctctggttttggaatgaagtcttctcggccctttact 655
            ||| |||| || || | ||| || |||||||||||||  || |||||||  |||||||||
Sbjct: 992  gatcttataaggcgtcttgtttcttctggttttggaacaaaatcttctcttccctttact 933

                         
Query: 656  aagtccatataca 668
            |||||||| ||||
Sbjct: 932  aagtccatgtaca 920
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>gb|AY142015.1| Arabidopsis thaliana At5g47860/MCA23_20 mRNA, complete cds
          Length = 1296

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 108/133 (81%)
 Strand = Plus / Minus

                                                                       
Query: 536 gtttcatcaatttgatcatcttcgaactttataaggagatttcgagatattccgtagtag 595
           |||||||| |||  |||||| ||||| ||||| |  ||||| | ||| ||||| ||||||
Sbjct: 959 gtttcatctattgaatcatcctcgaattttatcaacagattcctagagattccatagtag 900

                                                                       
Query: 596 gattttattagccggcgtgtctcctctggttttggaatgaagtcttctcggccctttact 655
           ||| |||| || || | ||| || |||||||||||||  || |||||||  |||||||||
Sbjct: 899 gatcttataaggcgtcttgtttcttctggttttggaacaaaatcttctcttccctttact 840

                        
Query: 656 aagtccatataca 668
           |||||||| ||||
Sbjct: 839 aagtccatgtaca 827
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>gb|AY058159.1| Arabidopsis thaliana AT5g47860/MCA23_20 mRNA, complete cds
          Length = 1430

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 108/133 (81%)
 Strand = Plus / Minus

                                                                       
Query: 536 gtttcatcaatttgatcatcttcgaactttataaggagatttcgagatattccgtagtag 595
           |||||||| |||  |||||| ||||| ||||| |  ||||| | ||| ||||| ||||||
Sbjct: 982 gtttcatctattgaatcatcctcgaattttatcaacagattcctagagattccatagtag 923

                                                                       
Query: 596 gattttattagccggcgtgtctcctctggttttggaatgaagtcttctcggccctttact 655
           ||| |||| || || | ||| || |||||||||||||  || |||||||  |||||||||
Sbjct: 922 gatcttataaggcgtcttgtttcttctggttttggaacaaaatcttctcttccctttact 863

                        
Query: 656 aagtccatataca 668
           |||||||| ||||
Sbjct: 862 aagtccatgtaca 850
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>emb|BX832182.1|CNS09ZRY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH57ZD08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1392

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 108/133 (81%)
 Strand = Plus / Minus

                                                                       
Query: 536 gtttcatcaatttgatcatcttcgaactttataaggagatttcgagatattccgtagtag 595
           |||||||| |||  |||||| ||||| ||||| |  ||||| | ||| ||||| ||||||
Sbjct: 977 gtttcatctattgaatcatcctcgaattttatcaacagattcctagagattccatagtag 918

                                                                       
Query: 596 gattttattagccggcgtgtctcctctggttttggaatgaagtcttctcggccctttact 655
           ||| |||| || || | ||| || |||||||||||||  || |||||||  |||||||||
Sbjct: 917 gatcttataaggcgtcttgtttcttctggttttggaacaaaatcttctcttccctttact 858

                        
Query: 656 aagtccatataca 668
           |||||||| ||||
Sbjct: 857 aagtccatgtaca 845
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>emb|BX832080.1|CNS09ZUF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH50ZB04 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1503

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 108/133 (81%)
 Strand = Plus / Minus

                                                                        
Query: 536  gtttcatcaatttgatcatcttcgaactttataaggagatttcgagatattccgtagtag 595
            |||||||| |||  |||||| ||||| ||||| |  ||||| | ||| ||||| ||||||
Sbjct: 1053 gtttcatctattgaatcatcctcgaattttatcaacagattcctagagattccatagtag 994

                                                                        
Query: 596  gattttattagccggcgtgtctcctctggttttggaatgaagtcttctcggccctttact 655
            ||| |||| || || | ||| || |||||||||||||  || |||||||  |||||||||
Sbjct: 993  gatcttataaggcgtcttgtttcttctggttttggaacaaaatcttctcttccctttact 934

                         
Query: 656  aagtccatataca 668
            |||||||| ||||
Sbjct: 933  aagtccatgtaca 921
to top
>emb|BX831123.1|CNS09ZHA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS5ZC04 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1432

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 71/85 (83%)
 Strand = Plus / Minus

                                                                       
Query: 584 attccgtagtaggattttattagccggcgtgtctcctctggttttggaatgaagtcttct 643
           ||||| ||||||||| |||| || || | ||| || |||||||||||||  || ||||||
Sbjct: 966 attccatagtaggatcttataaggcgtcttgtttcttctggttttggaacaaaatcttct 907

                                    
Query: 644 cggccctttactaagtccatataca 668
           |  ||||||||||||||||| ||||
Sbjct: 906 cttccctttactaagtccatgtaca 882
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>emb|BX832126.1|CNS09ZKJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH53ZC09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1370

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 108/134 (80%), Gaps = 1/134 (0%)
 Strand = Plus / Minus

                                                                       
Query: 536 gtttcatcaatttgatcatcttcgaactttataaggagatttcgagatattccgtagtag 595
           |||||||| |||  |||||| ||||| ||||| |  ||||| | ||| ||||| ||||||
Sbjct: 976 gtttcatctattgaatcatcctcgaattttatcaacagattcctagagattccatagtag 917

                                                                       
Query: 596 gattttat-tagccggcgtgtctcctctggttttggaatgaagtcttctcggccctttac 654
           ||| |||| ||| || | ||| || ||| |||||||||  || |||||||  ||||||||
Sbjct: 916 gatcttatataggcgtcttgtttcttcttgttttggaacaaaatcttctcttccctttac 857

                         
Query: 655 taagtccatataca 668
           ||||||||| ||||
Sbjct: 856 taagtccatgtaca 843
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>dbj|AB016886.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCA23
          Length = 82503

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                              
Query: 620   tctggttttggaatgaagtcttctcggccctttactaagtccatataca 668
             |||||||||||||  || |||||||  ||||||||||||||||| ||||
Sbjct: 60824 tctggttttggaacaaaatcttctcttccctttactaagtccatgtaca 60776
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>emb|CR538724.4| Mouse DNA sequence from clone RP23-81N12 on chromosome X, complete
             sequence
          Length = 44445

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 440   aatggaaggccatgatccccaggaag 465
             |||||||||||||||||| |||||||
Sbjct: 24341 aatggaaggccatgatcctcaggaag 24316
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>gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome
          Length = 1992676

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 537     tttcatcaatttgatcatcttc 558
               ||||||||||||||||||||||
Sbjct: 1582508 tttcatcaatttgatcatcttc 1582529
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>ref|NM_127834.2| Arabidopsis thaliana ubiquitin-protein ligase/ zinc ion binding
           AT2G22690 transcript variant AT2G22690.1 mRNA, complete
           cds
          Length = 1386

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 222 cagagtttgaagctacccat 241
           ||||||||||||||||||||
Sbjct: 621 cagagtttgaagctacccat 602
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>ref|NM_001036320.1| Arabidopsis thaliana ubiquitin-protein ligase/ zinc ion binding
           AT2G22690 transcript variant AT2G22690.2 mRNA, complete
           cds
          Length = 1553

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 222 cagagtttgaagctacccat 241
           ||||||||||||||||||||
Sbjct: 788 cagagtttgaagctacccat 769
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>gb|BC065522.1| Homo sapiens vascular endothelial growth factor, mRNA (cDNA clone
            IMAGE:6006890), complete cds
          Length = 2851

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 575  tttcgagatattccgtagta 594
            ||||||||||||||||||||
Sbjct: 2723 tttcgagatattccgtagta 2742
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>gb|AC124103.5| Mus musculus chromosome 15, clone RP24-271M13, complete sequence
          Length = 177753

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 19     taatgttcttataatactcctgcatacc 46
              ||||||| |||||| |||||||||||||
Sbjct: 139848 taatgttattataaaactcctgcatacc 139821
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>ref|NM_001025369.1| Homo sapiens vascular endothelial growth factor (VEGF), transcript
            variant 5, mRNA
          Length = 3507

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 575  tttcgagatattccgtagta 594
            ||||||||||||||||||||
Sbjct: 3386 tttcgagatattccgtagta 3405
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>ref|NM_001025370.1| Homo sapiens vascular endothelial growth factor (VEGF), transcript
            variant 6, mRNA
          Length = 3410

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 575  tttcgagatattccgtagta 594
            ||||||||||||||||||||
Sbjct: 3289 tttcgagatattccgtagta 3308
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>ref|NM_001033756.1| Homo sapiens vascular endothelial growth factor (VEGF), transcript
            variant 7, mRNA
          Length = 3476

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 575  tttcgagatattccgtagta 594
            ||||||||||||||||||||
Sbjct: 3355 tttcgagatattccgtagta 3374
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>ref|NM_001025368.1| Homo sapiens vascular endothelial growth factor (VEGF), transcript
            variant 4, mRNA
          Length = 3542

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 575  tttcgagatattccgtagta 594
            ||||||||||||||||||||
Sbjct: 3421 tttcgagatattccgtagta 3440
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>ref|NM_001025366.1| Homo sapiens vascular endothelial growth factor (VEGF), transcript
            variant 1, mRNA
          Length = 3665

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 575  tttcgagatattccgtagta 594
            ||||||||||||||||||||
Sbjct: 3544 tttcgagatattccgtagta 3563
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>ref|NM_003376.4| Homo sapiens vascular endothelial growth factor (VEGF), transcript
            variant 2, mRNA
          Length = 3614

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 575  tttcgagatattccgtagta 594
            ||||||||||||||||||||
Sbjct: 3493 tttcgagatattccgtagta 3512
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>ref|NM_001025367.1| Homo sapiens vascular endothelial growth factor (VEGF), transcript
            variant 3, mRNA
          Length = 3596

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 575  tttcgagatattccgtagta 594
            ||||||||||||||||||||
Sbjct: 3475 tttcgagatattccgtagta 3494
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>gb|AC136956.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038B22,
              complete sequence
          Length = 177557

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 569    aggagatttcgagatattcc 588
              ||||||||||||||||||||
Sbjct: 154709 aggagatttcgagatattcc 154690
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>gb|AC122182.4| Mus musculus BAC clone RP23-12G9 from 1, complete sequence
          Length = 197197

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 482    tcaagcagtgagctaatggc 501
              ||||||||||||||||||||
Sbjct: 142470 tcaagcagtgagctaatggc 142489
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>gb|AC110813.4| Homo sapiens BAC clone RP11-1336O20 from 4, complete sequence
          Length = 117167

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 647   ccctttactaagtccatata 666
             ||||||||||||||||||||
Sbjct: 55114 ccctttactaagtccatata 55095
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>emb|AL139006.13| Human DNA sequence from clone RP11-30E17 on chromosome 13q33.3-34
            Contains the 5' end of the C13orf10 gene for chromosome
            13 open reading frame 10, a novel gene and a CpG island,
            complete sequence
          Length = 37241

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 406  cattcctggtggaacgtcaggaag 429
            |||||||||||||| |||||||||
Sbjct: 4989 cattcctggtggaaagtcaggaag 5012
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>emb|AL136131.15| Human DNA sequence from clone RP1-261G23 on chromosome 6p12.2-21.1
              Contains the KIAA0110 gene, the FLJ30845 gene, the MRPS18A
              gene for mitochondrial ribosomal protein S18A, a pseudogene
              similar to OPA-interacting protein (OIP21) a novel gene,
              the VEGF gene for vascular endothelial growth factor and
              two CpG islands, complete sequence
          Length = 172033

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 575    tttcgagatattccgtagta 594
              ||||||||||||||||||||
Sbjct: 152094 tttcgagatattccgtagta 152113
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>emb|CR592173.1| full-length cDNA clone CS0DD004YC18 of Neuroblastoma Cot
           50-normalized of Homo sapiens (human)
          Length = 563

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 575 tttcgagatattccgtagta 594
           ||||||||||||||||||||
Sbjct: 488 tttcgagatattccgtagta 507
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>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome
          Length = 2685015

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 536     gtttcatcaatttgatcatc 555
               ||||||||||||||||||||
Sbjct: 1375990 gtttcatcaatttgatcatc 1375971
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>gb|AC006340.5| Arabidopsis thaliana chromosome 2 clone T9I22 map CIC06C07, complete
             sequence
          Length = 95375

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 222   cagagtttgaagctacccat 241
             ||||||||||||||||||||
Sbjct: 60956 cagagtttgaagctacccat 60975
to top
>gb|AF437895.1|AF437895 Homo sapiens vascular endothelial growth factor (VEGF) gene, partial
             cds
          Length = 15442

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 575   tttcgagatattccgtagta 594
             ||||||||||||||||||||
Sbjct: 14111 tttcgagatattccgtagta 14130
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>emb|BX248329.10| Zebrafish DNA sequence from clone CH211-206P14, complete sequence
          Length = 151789

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 528   tgatggaggtttcatcaatt 547
             ||||||||||||||||||||
Sbjct: 65433 tgatggaggtttcatcaatt 65452
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>gb|DQ059108.1| Arabidopsis thaliana RING finger family protein (At2g22690) mRNA,
           complete cds
          Length = 1146

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 222 cagagtttgaagctacccat 241
           ||||||||||||||||||||
Sbjct: 511 cagagtttgaagctacccat 492
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 569      aggagatttcgagatattcc 588
                ||||||||||||||||||||
Sbjct: 19977642 aggagatttcgagatattcc 19977623
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>emb|BX820269.1|CNS0A80V Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH16ZA07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1336

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 222 cagagtttgaagctacccat 241
           ||||||||||||||||||||
Sbjct: 601 cagagtttgaagctacccat 582
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>gb|AY087983.1| Arabidopsis thaliana clone 4014 mRNA, complete sequence
          Length = 1361

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 222 cagagtttgaagctacccat 241
           ||||||||||||||||||||
Sbjct: 598 cagagtttgaagctacccat 579
to top
>gb|AC023701.4| Drosophila melanogaster X BAC RP98-29B16 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 198245

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 1      gttgttttaatttatncttaatg 23
              ||||||||||||||| |||||||
Sbjct: 173731 gttgttttaatttatacttaatg 173753
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>gb|AC023695.4| Drosophila melanogaster X BAC RP98-25I9 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 164761

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 1      gttgttttaatttatncttaatg 23
              ||||||||||||||| |||||||
Sbjct: 120496 gttgttttaatttatacttaatg 120474
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>dbj|AK098750.1| Homo sapiens cDNA FLJ25884 fis, clone CBR02931
          Length = 2906

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 575  tttcgagatattccgtagta 594
            ||||||||||||||||||||
Sbjct: 2843 tttcgagatattccgtagta 2862
to top
>gb|AF024710.1|AF024710 Homo sapiens vascular endothelial growth factor (VEGF) mRNA, 3'UTR
          Length = 1923

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 575  tttcgagatattccgtagta 594
            ||||||||||||||||||||
Sbjct: 1814 tttcgagatattccgtagta 1833
to top
>gb|AE003432.5| Drosophila melanogaster chromosome X, section 16 of 74 of the complete
              sequence
          Length = 319328

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 1      gttgttttaatttatncttaatg 23
              ||||||||||||||| |||||||
Sbjct: 187864 gttgttttaatttatacttaatg 187842
to top
>gb|AE015927.1| Clostridium tetani E88, complete genome
          Length = 2799251

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 109     atccaaaatttccattactcataa 132
               ||||||||||||||||||| ||||
Sbjct: 2597745 atccaaaatttccattactaataa 2597768
to top
>gb|U72723.1|OLU72723 Oryza longistaminata receptor kinase-like protein (Xa21) gene, complete
             cds and family member C, pseudogene
          Length = 19639

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 569   aggagatttcgagatattcc 588
             ||||||||||||||||||||
Sbjct: 19082 aggagatttcgagatattcc 19063
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>gb|AF022375.1|AF022375 Homo sapiens vascular endothelial growth factor mRNA, complete cds
          Length = 3166

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 575  tttcgagatattccgtagta 594
            ||||||||||||||||||||
Sbjct: 3091 tttcgagatattccgtagta 3110
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 569      aggagatttcgagatattcc 588
                ||||||||||||||||||||
Sbjct: 20262621 aggagatttcgagatattcc 20262602
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>emb|CT009664.17| Pig DNA sequence from clone CH242-113D8 on chromosome 7, complete
              sequence
          Length = 182046

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 575    tttcgagatattccgtagta 594
              ||||||||||||||||||||
Sbjct: 107872 tttcgagatattccgtagta 107891
to top
>gb|BC058855.1| Homo sapiens cDNA clone IMAGE:5313912, containing frame-shift errors
          Length = 3562

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 575  tttcgagatattccgtagta 594
            ||||||||||||||||||||
Sbjct: 3423 tttcgagatattccgtagta 3442
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>dbj|AB209485.1| Homo sapiens mRNA for vascular endothelial growth factor variant
             protein
          Length = 12171

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 575   tttcgagatattccgtagta 594
             ||||||||||||||||||||
Sbjct: 12062 tttcgagatattccgtagta 12081
to top
>emb|Y08736.1|HSVEGF3UT H.sapiens vegf gene, 3'UTR
          Length = 1921

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 575  tttcgagatattccgtagta 594
            ||||||||||||||||||||
Sbjct: 1801 tttcgagatattccgtagta 1820


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,611,224
Number of Sequences: 3902068
Number of extensions: 6611224
Number of successful extensions: 107635
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107377
Number of HSP's gapped (non-prelim): 254
length of query: 713
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 690
effective length of database: 17,143,297,704
effective search space: 11828875415760
effective search space used: 11828875415760
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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