ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal32m21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_469450.1| Oryza sativa (japonica cultivar-group), mRNA 363 5e-97
2dbj|AK070474.1| Oryza sativa (japonica cultivar-group) cDNA clon... 363 5e-97
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 105 2e-19
4gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genom... 105 2e-19
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 105 2e-19
6emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete ... 50 0.010
7gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 48 0.038
8emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome... 48 0.038
9emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 48 0.038
10gb|AE005834.1| Caulobacter crescentus CB15 section 160 of 359 of... 48 0.038
11gb|AF466646.1| Zea mays putative transposase (Z195D10.1) gene, p... 46 0.15
12dbj|AK127800.1| Homo sapiens cDNA FLJ45901 fis, clone OCBBF3025887 44 0.59
13gb|AC094086.2| Homo sapiens chromosome 5 clone CTD-2170G1, compl... 44 0.59
14gb|AC026746.6| Homo sapiens chromosome 5 clone RP11-2O17, comple... 44 0.59
15gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 44 0.59
16gb|AC169378.2| Sorghum bicolor clone SB_BBc0007L02, complete seq... 42 2.3
17gb|AY169814.1| HIV-1 isolate 99USTWLA from USA, complete genome 42 2.3
18emb|AL356220.12| Human DNA sequence from clone RP11-97H1 on chro... 42 2.3
19gb|AC114478.2| Homo sapiens chromosome 3 clone RP11-333K5, compl... 42 2.3
20gb|AC090283.7| Homo sapiens chromosome 17, clone RP11-605F20, co... 42 2.3
21gb|AC073429.6| Homo sapiens BAC clone RP11-775H9 from 4, complet... 42 2.3
22gb|CP000249.1| Frankia sp. CcI3, complete genome 42 2.3
23gb|AC010851.2| Leishmania major chromosome 22 clone L4134, compl... 42 2.3
24gb|AC160649.2| Pan troglodytes BAC clone CH251-568N12 from chrom... 42 2.3
25dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 2.3
26gb|AC019254.12| Homo sapiens chromosome 15, clone RP11-424I19, c... 42 2.3
27emb|BX511193.5| Zebrafish DNA sequence from clone DKEY-149J18 in... 42 2.3
28emb|AL162759.4|CNS01RHZ Human chromosome 14 DNA sequence BAC R-7... 42 2.3
29gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 2.3
30gb|AC004231.1|AC004231 Homo sapiens chromosome 17, clone hRPC.11... 42 2.3
31emb|AL163953.3|CNS05TBQ Human chromosome 14 DNA sequence BAC R-5... 42 2.3
32dbj|AB070952.1| Streptomyces avermitilis peptide-3 biosynthetic ... 42 2.3
33gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 9.3
34gb|AC158579.7| Mus musculus chromosome 7, clone RP24-180F12, com... 40 9.3
35gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 9.3
36gb|AC146066.4| Pan troglodytes BAC clone RP43-60F19 from 7, comp... 40 9.3
37gb|AC158947.4| Mus musculus chromosome 7, clone RP23-230A4, comp... 40 9.3
38emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 9.3
39emb|CT025685.5| Mouse DNA sequence from clone RP24-116B6 on chro... 40 9.3
40emb|AL591791.1|SME591791 Sinorhizobium meliloti 1021 complete ch... 40 9.3
41gb|AC003079.2| Homo sapiens BAC clone GS1-303P24 from 7, complet... 40 9.3
42gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 9.3
43gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 9.3
44gb|AC090786.6| Homo sapiens chromosome 8, clone RP11-381G11, com... 40 9.3
45emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 9.3
46gb|BC076452.1| Danio rerio zgc:91884, mRNA (cDNA clone MGC:91884... 40 9.3
47gb|AE011954.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 9.3
48gb|AC016525.11| Homo sapiens chromosome 15 clone RP11-358M11 map... 40 9.3
49gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 9.3
50gb|AC110187.11| Mus musculus chromosome 7, clone RP24-541E23, co... 40 9.3
51gb|AC007419.7| Drosophila melanogaster, chromosome 2L, region 25... 40 9.3
52gb|AC008131.25| Homo sapiens chromosome 15 clone ctd-2265b18 map... 40 9.3
53gb|AC175822.2| Pan troglodytes BAC clone CH251-442M6 from chromo... 40 9.3
54dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
55gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B... 40 9.3
56gb|AC017118.3|AC017118 Genomic sequence for Arabidopsis thaliana... 40 9.3
57ref|NM_001002329.1| Danio rerio zgc:91884 (zgc:91884), mRNA 40 9.3
58dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 9.3
59dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 9.3
60dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 9.3
61dbj|AP005808.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
62gb|AC006424.5|AC006424 Arabidopsis thaliana chromosome I BAC F9L... 40 9.3
63emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 9.3
64gb|AE014299.1| Shewanella oneidensis MR-1, complete genome 40 9.3
65emb|Z49538.1|SCYJR038C S.cerevisiae chromosome X reading frame O... 40 9.3
66gb|AE003611.3| Drosophila melanogaster chromosome 2L, section 20... 40 9.3
67dbj|AP001561.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 9.3
68gb|L36344.1|YSCTGGMS Saccharomyces cerevisiae tRNA-Met, tRNA-Ser... 40 9.3
69emb|AL627229.10| Mouse DNA sequence from clone RP23-354L19 on ch... 40 9.3 
>ref|XM_469450.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1067

 Score =  363 bits (183), Expect = 5e-97
 Identities = 411/487 (84%)
 Strand = Plus / Minus

                                                                       
Query: 190 ttattacaacggaactcggtataatgggtcgaccatcttcagcacgaacaagttcccctt 249
           ||||||||| ||||||| ||||  |||||| ||||| ||||| | |||||| ||||||||
Sbjct: 829 ttattacaatggaactctgtatgttgggtcaaccattttcagtatgaacaaattcccctt 770

                                                                       
Query: 250 gtctcctcttgaaaccctgagctcttcatcaagatatgtgatctctagttcacctttgcc 309
            || ||||||||  ||||||||||||||||||||||||| || |||||||||||||| ||
Sbjct: 769 atcgcctcttgaggccctgagctcttcatcaagatatgtaatttctagttcacctttacc 710

                                                                       
Query: 310 acttccaggtgctttgatttggatcaggctaaatattttgaagtaatcaaacctaactgc 369
           ||| |||||||||||||||   ||||   |||||||||||||||||||||||| ||||||
Sbjct: 709 actgccaggtgctttgattgaaatcaaattaaatattttgaagtaatcaaaccgaactgc 650

                                                                       
Query: 370 cacttttctagagttgagaggcaccaagttggcagtgacctgattgaagtaaggcagtgt 429
           |||| ||||||| |||||||| |||||||||||||| |||||||| || || |||   ||
Sbjct: 649 cactcttctagaattgagaggtaccaagttggcagtaacctgattaaaatagggccacgt 590

                                                                       
Query: 430 ctccatgttttgagctcgtagcgtgtcggtgttgatcgcctggtaaatcgtcccgtatgg 489
           |||||| ||||| |||| ||  ||||| || ||||| || ||||||||||||||  | ||
Sbjct: 589 ctccatattttgggctcttaaagtgtcagtattgattgcttggtaaatcgtcccaaacgg 530

                                                                       
Query: 490 cctcagaaactttggcctctgtggctggagaatggaagtggaggtggtgtagaggagctc 549
           |||||||||||||||||||||||| || || |||||    |||||||||||||| |||||
Sbjct: 529 cctcagaaactttggcctctgtggttgcagtatggattctgaggtggtgtagagaagctc 470

                                                                       
Query: 550 ccacttgccgttgaggagctcggacttgagcggctccttggtcgggctcacctcctccag 609
           ||| |||||||||||||| || |||||||| ||||||||     || |||||||||||||
Sbjct: 469 ccatttgccgttgaggagatcagacttgagtggctccttcacttggttcacctcctccag 410

                                                                       
Query: 610 ccgctgcgcgatctggtcgacgcggtccttgtcctcgggcgtggcctcggcgccgcggtc 669
             ||||  | ||||  |||||||| ||||||||||| | |||||| ||| ||||||||||
Sbjct: 409 ttgctgaacaatcttctcgacgcgctccttgtcctccgccgtggcgtcgacgccgcggtc 350

                  
Query: 670 gagcggc 676
           |||||||
Sbjct: 349 gagcggc 343
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>dbj|AK070474.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052I15, full
           insert sequence
          Length = 1068

 Score =  363 bits (183), Expect = 5e-97
 Identities = 411/487 (84%)
 Strand = Plus / Minus

                                                                       
Query: 190 ttattacaacggaactcggtataatgggtcgaccatcttcagcacgaacaagttcccctt 249
           ||||||||| ||||||| ||||  |||||| ||||| ||||| | |||||| ||||||||
Sbjct: 830 ttattacaatggaactctgtatgttgggtcaaccattttcagtatgaacaaattcccctt 771

                                                                       
Query: 250 gtctcctcttgaaaccctgagctcttcatcaagatatgtgatctctagttcacctttgcc 309
            || ||||||||  ||||||||||||||||||||||||| || |||||||||||||| ||
Sbjct: 770 atcgcctcttgaggccctgagctcttcatcaagatatgtaatttctagttcacctttacc 711

                                                                       
Query: 310 acttccaggtgctttgatttggatcaggctaaatattttgaagtaatcaaacctaactgc 369
           ||| |||||||||||||||   ||||   |||||||||||||||||||||||| ||||||
Sbjct: 710 actgccaggtgctttgattgaaatcaaattaaatattttgaagtaatcaaaccgaactgc 651

                                                                       
Query: 370 cacttttctagagttgagaggcaccaagttggcagtgacctgattgaagtaaggcagtgt 429
           |||| ||||||| |||||||| |||||||||||||| |||||||| || || |||   ||
Sbjct: 650 cactcttctagaattgagaggtaccaagttggcagtaacctgattaaaatagggccacgt 591

                                                                       
Query: 430 ctccatgttttgagctcgtagcgtgtcggtgttgatcgcctggtaaatcgtcccgtatgg 489
           |||||| ||||| |||| ||  ||||| || ||||| || ||||||||||||||  | ||
Sbjct: 590 ctccatattttgggctcttaaagtgtcagtattgattgcttggtaaatcgtcccaaacgg 531

                                                                       
Query: 490 cctcagaaactttggcctctgtggctggagaatggaagtggaggtggtgtagaggagctc 549
           |||||||||||||||||||||||| || || |||||    |||||||||||||| |||||
Sbjct: 530 cctcagaaactttggcctctgtggttgcagtatggattctgaggtggtgtagagaagctc 471

                                                                       
Query: 550 ccacttgccgttgaggagctcggacttgagcggctccttggtcgggctcacctcctccag 609
           ||| |||||||||||||| || |||||||| ||||||||     || |||||||||||||
Sbjct: 470 ccatttgccgttgaggagatcagacttgagtggctccttcacttggttcacctcctccag 411

                                                                       
Query: 610 ccgctgcgcgatctggtcgacgcggtccttgtcctcgggcgtggcctcggcgccgcggtc 669
             ||||  | ||||  |||||||| ||||||||||| | |||||| ||| ||||||||||
Sbjct: 410 ttgctgaacaatcttctcgacgcgctccttgtcctccgccgtggcgtcgacgccgcggtc 351

                  
Query: 670 gagcggc 676
           |||||||
Sbjct: 350 gagcggc 344
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  105 bits (53), Expect = 2e-19
 Identities = 68/73 (93%)
 Strand = Plus / Minus

                                                                            
Query: 339      taaatattttgaagtaatcaaacctaactgccacttttctagagttgagaggcaccaagt 398
                |||||||||||||||||||||||| |||||||||| ||||||| |||||||| |||||||
Sbjct: 28011545 taaatattttgaagtaatcaaaccgaactgccactcttctagaattgagaggtaccaagt 28011486

                             
Query: 399      tggcagtgacctg 411
                ||||||| |||||
Sbjct: 28011485 tggcagtaacctg 28011473



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 60/64 (93%)
 Strand = Plus / Minus

                                                                            
Query: 265      cctgagctcttcatcaagatatgtgatctctagttcacctttgccacttccaggtgcttt 324
                |||||||||||||||||||||||| || |||||||||||||| ||||| |||||||||||
Sbjct: 28012055 cctgagctcttcatcaagatatgtaatttctagttcacctttaccactgccaggtgcttt 28011996

                    
Query: 325      gatt 328
                ||||
Sbjct: 28011995 gatt 28011992



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                           
Query: 530      gaggtggtgtagaggagctcccacttgccgttgaggagctcggacttgagcggctcctt 588
                |||||||||||||| |||||||| |||||||||||||| || |||||||| ||||||||
Sbjct: 28010645 gaggtggtgtagagaagctcccatttgccgttgaggagatcagacttgagtggctcctt 28010587



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                            
Query: 428      gtctccatgttttgagctcgtagcgtgtcggtgttgatcgcctggtaaatcgtcccgtat 487
                |||||||| ||||| |||| ||  ||||| || ||||| || ||||||||||||||  | 
Sbjct: 28010886 gtctccatattttgggctcttaaagtgtcagtattgattgcttggtaaatcgtcccaaac 28010827

                                       
Query: 488      ggcctcagaaactttggcctctg 510
                |||||||||||||||||||||||
Sbjct: 28010826 ggcctcagaaactttggcctctg 28010804



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                   
Query: 626      tcgacgcggtccttgtcctcgggcgtggcctcggcgccgcggtcgagcggc 676
                |||||||| ||||||||||| | |||||| ||| |||||||||||||||||
Sbjct: 28010451 tcgacgcgctccttgtcctccgccgtggcgtcgacgccgcggtcgagcggc 28010401



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 62       atagactaattaaactcaaa 81
                ||||||||||||||||||||
Sbjct: 20401349 atagactaattaaactcaaa 20401368
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>gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genomic sequence, complete
             sequence
          Length = 133889

 Score =  105 bits (53), Expect = 2e-19
 Identities = 68/73 (93%)
 Strand = Plus / Plus

                                                                         
Query: 339   taaatattttgaagtaatcaaacctaactgccacttttctagagttgagaggcaccaagt 398
             |||||||||||||||||||||||| |||||||||| ||||||| |||||||| |||||||
Sbjct: 13481 taaatattttgaagtaatcaaaccgaactgccactcttctagaattgagaggtaccaagt 13540

                          
Query: 399   tggcagtgacctg 411
             ||||||| |||||
Sbjct: 13541 tggcagtaacctg 13553



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 60/64 (93%)
 Strand = Plus / Plus

                                                                         
Query: 265   cctgagctcttcatcaagatatgtgatctctagttcacctttgccacttccaggtgcttt 324
             |||||||||||||||||||||||| || |||||||||||||| ||||| |||||||||||
Sbjct: 12971 cctgagctcttcatcaagatatgtaatttctagttcacctttaccactgccaggtgcttt 13030

                 
Query: 325   gatt 328
             ||||
Sbjct: 13031 gatt 13034



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                        
Query: 530   gaggtggtgtagaggagctcccacttgccgttgaggagctcggacttgagcggctcctt 588
             |||||||||||||| |||||||| |||||||||||||| || |||||||| ||||||||
Sbjct: 14381 gaggtggtgtagagaagctcccatttgccgttgaggagatcagacttgagtggctcctt 14439



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 71/83 (85%)
 Strand = Plus / Plus

                                                                         
Query: 428   gtctccatgttttgagctcgtagcgtgtcggtgttgatcgcctggtaaatcgtcccgtat 487
             |||||||| ||||| |||| ||  ||||| || ||||| || ||||||||||||||  | 
Sbjct: 14140 gtctccatattttgggctcttaaagtgtcagtattgattgcttggtaaatcgtcccaaac 14199

                                    
Query: 488   ggcctcagaaactttggcctctg 510
             |||||||||||||||||||||||
Sbjct: 14200 ggcctcagaaactttggcctctg 14222



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                
Query: 626   tcgacgcggtccttgtcctcgggcgtggcctcggcgccgcggtcgagcggc 676
             |||||||| ||||||||||| | |||||| ||| |||||||||||||||||
Sbjct: 14575 tcgacgcgctccttgtcctccgccgtggcgtcgacgccgcggtcgagcggc 14625
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  105 bits (53), Expect = 2e-19
 Identities = 68/73 (93%)
 Strand = Plus / Minus

                                                                            
Query: 339      taaatattttgaagtaatcaaacctaactgccacttttctagagttgagaggcaccaagt 398
                |||||||||||||||||||||||| |||||||||| ||||||| |||||||| |||||||
Sbjct: 28102869 taaatattttgaagtaatcaaaccgaactgccactcttctagaattgagaggtaccaagt 28102810

                             
Query: 399      tggcagtgacctg 411
                ||||||| |||||
Sbjct: 28102809 tggcagtaacctg 28102797



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 60/64 (93%)
 Strand = Plus / Minus

                                                                            
Query: 265      cctgagctcttcatcaagatatgtgatctctagttcacctttgccacttccaggtgcttt 324
                |||||||||||||||||||||||| || |||||||||||||| ||||| |||||||||||
Sbjct: 28103379 cctgagctcttcatcaagatatgtaatttctagttcacctttaccactgccaggtgcttt 28103320

                    
Query: 325      gatt 328
                ||||
Sbjct: 28103319 gatt 28103316



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                           
Query: 530      gaggtggtgtagaggagctcccacttgccgttgaggagctcggacttgagcggctcctt 588
                |||||||||||||| |||||||| |||||||||||||| || |||||||| ||||||||
Sbjct: 28101969 gaggtggtgtagagaagctcccatttgccgttgaggagatcagacttgagtggctcctt 28101911



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                            
Query: 428      gtctccatgttttgagctcgtagcgtgtcggtgttgatcgcctggtaaatcgtcccgtat 487
                |||||||| ||||| |||| ||  ||||| || ||||| || ||||||||||||||  | 
Sbjct: 28102210 gtctccatattttgggctcttaaagtgtcagtattgattgcttggtaaatcgtcccaaac 28102151

                                       
Query: 488      ggcctcagaaactttggcctctg 510
                |||||||||||||||||||||||
Sbjct: 28102150 ggcctcagaaactttggcctctg 28102128



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                   
Query: 626      tcgacgcggtccttgtcctcgggcgtggcctcggcgccgcggtcgagcggc 676
                |||||||| ||||||||||| | |||||| ||| |||||||||||||||||
Sbjct: 28101775 tcgacgcgctccttgtcctccgccgtggcgtcgacgccgcggtcgagcggc 28101725



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 62       atagactaattaaactcaaa 81
                ||||||||||||||||||||
Sbjct: 20394378 atagactaattaaactcaaa 20394397
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>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29
          Length = 309050

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                       
Query: 637    cttgtcctcgggcgtggcctcggcg 661
              |||||||||||||||||||||||||
Sbjct: 174555 cttgtcctcgggcgtggcctcggcg 174579
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                       
Query: 637     cttgtcctcgggcgtggcctcggc 660
               ||||||||||||||||||||||||
Sbjct: 1155345 cttgtcctcgggcgtggcctcggc 1155322
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>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13
          Length = 349306

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 637    cttgtcctcgggcgtggcctcggc 660
              ||||||||||||||||||||||||
Sbjct: 121514 cttgtcctcgggcgtggcctcggc 121491
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>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 4/14
          Length = 327650

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 637    cttgtcctcgggcgtggcctcggc 660
              ||||||||||||||||||||||||
Sbjct: 168748 cttgtcctcgggcgtggcctcggc 168725
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>gb|AE005834.1| Caulobacter crescentus CB15 section 160 of 359 of the complete genome
          Length = 10982

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 637  cttgtcctcgggcgtggcctcggc 660
            ||||||||||||||||||||||||
Sbjct: 3314 cttgtcctcgggcgtggcctcggc 3291
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>gb|AF466646.1| Zea mays putative transposase (Z195D10.1) gene, partial cds;
             glycyl-tRNA synthetase (Z195D10.2), ornithine
             carbamoyltransferase (Z195D10.3), putative gag protein
             (Z195D10.5), putative SET-domain transcriptional regulator
             (Z195D10.7), putative oxysterol-binding protein
             (Z195D10.8), putative polyprotein (Z195D10.9), putative
             oxysterol-binding protein (Z195D10.10), putative gag-pol
             polyprotein (Z195D10.11), putative
             phosphatidylinositol-4-phosphate-5-kinase (Z195D10.12),
             hypothetical protein (Z195D10.15), putative gag-pol
             polyprotein (Z195D10.16), putative polyprotein
             (Z195D10.17), putative retrotransposon protein
             (Z195D10.18), and prpol (Z195D10.19) genes, complete cds;
             and putative teosinte branched2 (Z195D10.20) gene, partial
             cds
          Length = 141939

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                    
Query: 214   tgggtcgaccatcttcagcacgaacaagttccccttgtctcctcttgaaaccctg 268
             |||||||||||||||||  || ||||| || | |||||| |||||| ||||||||
Sbjct: 33710 tgggtcgaccatcttcattacaaacaactttctcttgtcacctcttaaaaccctg 33656
to top
>dbj|AK127800.1| Homo sapiens cDNA FLJ45901 fis, clone OCBBF3025887
          Length = 5255

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 tcccatctgagttctgtcagtt 42
          ||||||||||||||||||||||
Sbjct: 49 tcccatctgagttctgtcagtt 70
to top
>gb|AC094086.2| Homo sapiens chromosome 5 clone CTD-2170G1, complete sequence
          Length = 100853

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 21    tcccatctgagttctgtcagtt 42
             ||||||||||||||||||||||
Sbjct: 86429 tcccatctgagttctgtcagtt 86450
to top
>gb|AC026746.6| Homo sapiens chromosome 5 clone RP11-2O17, complete sequence
          Length = 179144

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 21    tcccatctgagttctgtcagtt 42
             ||||||||||||||||||||||
Sbjct: 58182 tcccatctgagttctgtcagtt 58203
to top
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 604    ctccagccgctgcgcgatctggtcga 629
              |||||||||| |||||||||||||||
Sbjct: 486870 ctccagccgccgcgcgatctggtcga 486845
to top
>gb|AC169378.2| Sorghum bicolor clone SB_BBc0007L02, complete sequence
          Length = 138518

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 61    tatagactaattaaactcaaa 81
             |||||||||||||||||||||
Sbjct: 38964 tatagactaattaaactcaaa 38984
to top
>gb|AY169814.1| HIV-1 isolate 99USTWLA from USA, complete genome
          Length = 9186

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 263  accctgagctcttcatcaaga 283
            |||||||||||||||||||||
Sbjct: 8952 accctgagctcttcatcaaga 8972
to top
>emb|AL356220.12| Human DNA sequence from clone RP11-97H1 on chromosome 10 Contains part
             of the HPSE2 gene for heparanase 2, complete sequence
          Length = 139852

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 514   ctggagaatggaagtggaggt 534
             |||||||||||||||||||||
Sbjct: 30587 ctggagaatggaagtggaggt 30567
to top
>gb|AC114478.2| Homo sapiens chromosome 3 clone RP11-333K5, complete sequence
          Length = 158276

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 255   ctcttgaaaccctgagctctt 275
             |||||||||||||||||||||
Sbjct: 37850 ctcttgaaaccctgagctctt 37870
to top
>gb|AC090283.7| Homo sapiens chromosome 17, clone RP11-605F20, complete sequence
          Length = 168137

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 249   tgtctcctcttgaaaccctga 269
             |||||||||||||||||||||
Sbjct: 10795 tgtctcctcttgaaaccctga 10815
to top
>gb|AC073429.6| Homo sapiens BAC clone RP11-775H9 from 4, complete sequence
          Length = 114909

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 282   gatatgtgatctctagttcaccttt 306
             ||||||| |||||||||||||||||
Sbjct: 57996 gatatgttatctctagttcaccttt 57972
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 637     cttgtcctcgggcgtggcctcggcg 661
               |||||| ||||||||||||||||||
Sbjct: 3892339 cttgtcttcgggcgtggcctcggcg 3892363
to top
>gb|AC010851.2| Leishmania major chromosome 22 clone L4134, complete sequence
          Length = 33339

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 651   tggcctcggcgccgcggtcgagcggcgcc 679
             ||||| ||||||||| |||||||||||||
Sbjct: 24651 tggccgcggcgccgccgtcgagcggcgcc 24679
to top
>gb|AC160649.2| Pan troglodytes BAC clone CH251-568N12 from chromosome unknown, complete
              sequence
          Length = 192241

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 255    ctcttgaaaccctgagctctt 275
              |||||||||||||||||||||
Sbjct: 112979 ctcttgaaaccctgagctctt 112999
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 628     gacgcggtccttgtcctcgggcgtggcct 656
               ||||||||||||| |||||| ||||||||
Sbjct: 3925845 gacgcggtccttggcctcggtcgtggcct 3925817



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 644     tcgggcgtggcctcggcgccgcgg 667
               ||||||||||| ||||||||||||
Sbjct: 6911433 tcgggcgtggcgtcggcgccgcgg 6911456
to top
>gb|AC019254.12| Homo sapiens chromosome 15, clone RP11-424I19, complete sequence
          Length = 179030

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 598    cacctcctccagccgctgcgc 618
              |||||||||||||||||||||
Sbjct: 124151 cacctcctccagccgctgcgc 124131
to top
>emb|BX511193.5| Zebrafish DNA sequence from clone DKEY-149J18 in linkage group 18,
             complete sequence
          Length = 97603

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 62    atagactaattaaactcaaac 82
             |||||||||||||||||||||
Sbjct: 37948 atagactaattaaactcaaac 37968
to top
>emb|AL162759.4|CNS01RHZ Human chromosome 14 DNA sequence BAC R-785G15 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 174273

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 255  ctcttgaaaccctgagctctt 275
            |||||||||||||||||||||
Sbjct: 5105 ctcttgaaaccctgagctctt 5085
to top
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 637     cttgtcctcgggcgtggcctcggcg 661
               |||||||||||| ||||||||||||
Sbjct: 1039903 cttgtcctcgggggtggcctcggcg 1039927



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 616     cgcgatctggtcgacgcggt 635
               ||||||||||||||||||||
Sbjct: 4174561 cgcgatctggtcgacgcggt 4174542
to top
>gb|AC004231.1|AC004231 Homo sapiens chromosome 17, clone hRPC.1110_E_20, complete sequence
          Length = 137022

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 249    tgtctcctcttgaaaccctga 269
              |||||||||||||||||||||
Sbjct: 124030 tgtctcctcttgaaaccctga 124050
to top
>emb|AL163953.3|CNS05TBQ Human chromosome 14 DNA sequence BAC R-533L7 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 162986

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 255  ctcttgaaaccctgagctctt 275
            |||||||||||||||||||||
Sbjct: 6651 ctcttgaaaccctgagctctt 6671
to top
>dbj|AB070952.1| Streptomyces avermitilis peptide-3 biosynthetic gene cluster
          Length = 23451

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 628   gacgcggtccttgtcctcgggcgtggcct 656
             ||||||||||||| |||||| ||||||||
Sbjct: 17317 gacgcggtccttggcctcggtcgtggcct 17345
to top
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 630    cgcggtccttgtcctcgggc 649
              ||||||||||||||||||||
Sbjct: 429735 cgcggtccttgtcctcgggc 429754
to top
>gb|AC158579.7| Mus musculus chromosome 7, clone RP24-180F12, complete sequence
          Length = 179049

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 15    ttgctgtcccatctgagttctgtc 38
             ||||| ||||||||||||||||||
Sbjct: 70841 ttgctttcccatctgagttctgtc 70818
to top
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 641     tcctcgggcgtggcctcggc 660
               ||||||||||||||||||||
Sbjct: 3382207 tcctcgggcgtggcctcggc 3382188
to top
>gb|AC146066.4| Pan troglodytes BAC clone RP43-60F19 from 7, complete sequence
          Length = 183557

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 267   tgagctcttcatcaagatat 286
             ||||||||||||||||||||
Sbjct: 85646 tgagctcttcatcaagatat 85665
to top
>gb|AC158947.4| Mus musculus chromosome 7, clone RP23-230A4, complete sequence
          Length = 191195

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 15     ttgctgtcccatctgagttctgtc 38
              ||||| ||||||||||||||||||
Sbjct: 140907 ttgctttcccatctgagttctgtc 140930
to top
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 606     ccagccgctgcgcgatctggtcga 629
               |||||||||||||||| |||||||
Sbjct: 3696337 ccagccgctgcgcgatgtggtcga 3696360
to top
>emb|CT025685.5| Mouse DNA sequence from clone RP24-116B6 on chromosome 9, complete
             sequence
          Length = 173933

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    ctgtcagttcaaatgtgcca 53
             ||||||||||||||||||||
Sbjct: 46331 ctgtcagttcaaatgtgcca 46350
to top
>emb|AL591791.1|SME591791 Sinorhizobium meliloti 1021 complete chromosome; segment 10/12
          Length = 340900

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 624    ggtcgacgcggtccttgtcc 643
              ||||||||||||||||||||
Sbjct: 295164 ggtcgacgcggtccttgtcc 295183
to top
>gb|AC003079.2| Homo sapiens BAC clone GS1-303P24 from 7, complete sequence
          Length = 62331

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 267   tgagctcttcatcaagatat 286
             ||||||||||||||||||||
Sbjct: 45755 tgagctcttcatcaagatat 45736
to top
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 604     ctccagccgctgcgcgatctggtcgacg 631
               |||| |||||||||||||| ||||||||
Sbjct: 4328624 ctccggccgctgcgcgatcaggtcgacg 4328651



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 641     tcctcgggcgtggcctcggc 660
               ||||||||||||||||||||
Sbjct: 2784197 tcctcgggcgtggcctcggc 2784216
to top
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 652     ggcctcggcgccgcggtcga 671
               ||||||||||||||||||||
Sbjct: 2879035 ggcctcggcgccgcggtcga 2879016
to top
>gb|AC090786.6| Homo sapiens chromosome 8, clone RP11-381G11, complete sequence
          Length = 188274

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     catctgagttctgtcagttc 43
              ||||||||||||||||||||
Sbjct: 139899 catctgagttctgtcagttc 139880
to top
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 600    cctcctccagccgctgcgcgatctggtc 627
              |||||||||||||||| |||||| ||||
Sbjct: 311852 cctcctccagccgctgagcgatccggtc 311879
to top
>gb|BC076452.1| Danio rerio zgc:91884, mRNA (cDNA clone MGC:91884 IMAGE:7039061),
           complete cds
          Length = 1330

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 513 gctggagaatggaagtggaggtggtgtagagg 544
           |||| ||| ||||| |||||||||||||||||
Sbjct: 265 gctgaagagtggaaatggaggtggtgtagagg 234
to top
>gb|AE011954.1| Xanthomonas axonopodis pv. citri str. 306,  section 332 of 469 of the
            complete genome
          Length = 12615

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 606  ccagccgctgcgcgatctggtcga 629
            |||||||||||||||| |||||||
Sbjct: 7959 ccagccgctgcgcgatgtggtcga 7982
to top
>gb|AC016525.11| Homo sapiens chromosome 15 clone RP11-358M11 map 15q21.3, complete
              sequence
          Length = 256019

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 519    gaatggaagtggaggtggtg 538
              ||||||||||||||||||||
Sbjct: 105817 gaatggaagtggaggtggtg 105798
to top
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 612     gctgcgcgatctggtcgacg 631
               ||||||||||||||||||||
Sbjct: 1142663 gctgcgcgatctggtcgacg 1142682
to top
>gb|AC110187.11| Mus musculus chromosome 7, clone RP24-541E23, complete sequence
          Length = 181046

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 15    ttgctgtcccatctgagttctgtc 38
             ||||| ||||||||||||||||||
Sbjct: 59801 ttgctttcccatctgagttctgtc 59778
to top
>gb|AC007419.7| Drosophila melanogaster, chromosome 2L, region 25E-25F, BAC clone
              BACR07G15, complete sequence
          Length = 190668

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 519    gaatggaagtggaggtggtg 538
              ||||||||||||||||||||
Sbjct: 113947 gaatggaagtggaggtggtg 113928
to top
>gb|AC008131.25| Homo sapiens chromosome 15 clone ctd-2265b18 map 15q21, complete
             sequence
          Length = 131891

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 519   gaatggaagtggaggtggtg 538
             ||||||||||||||||||||
Sbjct: 81397 gaatggaagtggaggtggtg 81416
to top
>gb|AC175822.2| Pan troglodytes BAC clone CH251-442M6 from chromosome 7, complete
              sequence
          Length = 163335

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 267    tgagctcttcatcaagatat 286
              ||||||||||||||||||||
Sbjct: 138345 tgagctcttcatcaagatat 138364
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 62       atagactaattaaactcaaa 81
                ||||||||||||||||||||
Sbjct: 21177897 atagactaattaaactcaaa 21177878
to top
>gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B24 genomic sequence, complete
             sequence
          Length = 152883

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    atagactaattaaactcaaa 81
             ||||||||||||||||||||
Sbjct: 45649 atagactaattaaactcaaa 45668
to top
>gb|AC017118.3|AC017118 Genomic sequence for Arabidopsis thaliana BAC F6N18 from chromosome I,
             complete sequence
          Length = 92219

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 256   tcttgaaaccctgagctctt 275
             ||||||||||||||||||||
Sbjct: 91761 tcttgaaaccctgagctctt 91780
to top
>ref|NM_001002329.1| Danio rerio zgc:91884 (zgc:91884), mRNA
          Length = 1330

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 513 gctggagaatggaagtggaggtggtgtagagg 544
           |||| ||| ||||| |||||||||||||||||
Sbjct: 265 gctgaagagtggaaatggaggtggtgtagagg 234
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 615     gcgcgatctggtcgacgcgg 634
               ||||||||||||||||||||
Sbjct: 3842852 gcgcgatctggtcgacgcgg 3842871
to top
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 637     cttgtcctcgggcgtggcct 656
               ||||||||||||||||||||
Sbjct: 2512749 cttgtcctcgggcgtggcct 2512768
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 654     cctcggcgccgcggtcgagc 673
               ||||||||||||||||||||
Sbjct: 2385412 cctcggcgccgcggtcgagc 2385393
to top
>dbj|AP005808.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0038F20
          Length = 129595

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    atagactaattaaactcaaa 81
             ||||||||||||||||||||
Sbjct: 84613 atagactaattaaactcaaa 84594
to top
>gb|AC006424.5|AC006424 Arabidopsis thaliana chromosome I BAC F9L11 genomic sequence,
            complete sequence
          Length = 122836

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  tcttgaaaccctgagctctt 275
            ||||||||||||||||||||
Sbjct: 1177 tcttgaaaccctgagctctt 1196
to top
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 644    tcgggcgtggcctcggcgccgcgg 667
              ||||||||||||||||||| ||||
Sbjct: 178299 tcgggcgtggcctcggcgctgcgg 178276
to top
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome
          Length = 4969803

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 352     gtaatcaaacctaactgcca 371
               ||||||||||||||||||||
Sbjct: 2758938 gtaatcaaacctaactgcca 2758919
to top
>emb|Z49538.1|SCYJR038C S.cerevisiae chromosome X reading frame ORF YJR038c
          Length = 4260

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 272  tcttcatcaagatatgtgat 291
            ||||||||||||||||||||
Sbjct: 2638 tcttcatcaagatatgtgat 2657
to top
>gb|AE003611.3| Drosophila melanogaster chromosome 2L, section 20 of 83 of the complete
             sequence
          Length = 260731

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 519   gaatggaagtggaggtggtg 538
             ||||||||||||||||||||
Sbjct: 47037 gaatggaagtggaggtggtg 47056
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>dbj|AP001561.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-732G1, complete
             sequences
          Length = 195800

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 369   ccacttttctagagttgaga 388
             ||||||||||||||||||||
Sbjct: 68459 ccacttttctagagttgaga 68440
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>gb|L36344.1|YSCTGGMS Saccharomyces cerevisiae tRNA-Met, tRNA-Ser, tRNA-Gly genes and 24 ORFs
          Length = 42500

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 272   tcttcatcaagatatgtgat 291
             ||||||||||||||||||||
Sbjct: 12720 tcttcatcaagatatgtgat 12739
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>emb|AL627229.10| Mouse DNA sequence from clone RP23-354L19 on chromosome 4, complete
              sequence
          Length = 149730

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 247    cttgtctcctcttgaaaccctgag 270
              |||||||||||||||||| |||||
Sbjct: 120944 cttgtctcctcttgaaacgctgag 120921


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,630,372
Number of Sequences: 3902068
Number of extensions: 5630372
Number of successful extensions: 109673
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107864
Number of HSP's gapped (non-prelim): 1805
length of query: 679
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 656
effective length of database: 17,143,297,704
effective search space: 11246003293824
effective search space used: 11246003293824
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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