ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal33b11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|L36959.1|BLYCA Hordeum vulgare carbonic anhydrase mRNA, complete cds Length = 1529 Score = 1207 bits (609), Expect = 0.0 Identities = 623/630 (98%) Strand = Plus / Minus Query: 17 acgatcaaattatgcatcacatagcagtacaattcctcgtcagaaaatggtgaagnnnnn 76 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1439 acgatcaaattatgcatcacatagcagtacaattcctcgtcagaaaatggtgaagaaaaa 1380 Query: 77 nnggttctattgcttatggcaaattcacatcgggccatccggcatccagtactggacaat 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1379 aaggttctattgcttatggcaaattcacatcgggccatccggcatccagtactggacaat 1320 Query: 137 aacgggtacgcactcccatggcattgcattcacatcgatcggacgatatcttgatatatg 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1319 aacgggtacgcactcccatggcattgcattcacatcgatcggacgatatcttgatatatg 1260 Query: 197 tacgtttgtatatgtcggagttaaccggtggggaagatttactgctcccatgtttcgaac 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1259 tacgtttgtatatgtcggagttaaccggtggggaagatttactgctcccatgtttcgaac 1200 Query: 257 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1199 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 1140 Query: 317 tccttgacgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctcc 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1139 tccttgacgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctcc 1080 Query: 377 aggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttg 436 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1079 aggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttg 1020 Query: 437 gccgggaacccgatcctgacccagtcctcaacgaagtggaaggagtcgtctgcgccatcc 496 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1019 gccgggaacccgatcctgacccagtcctcaacgaagtggaaggagtcgtctgcgccatcc 960 Query: 497 ttgagcgagagcagagccttgattccaccgcagcggctgtggccaatcaccacgatgacc 556 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 959 ttgagcgagagcagagccttgattccaccgcagcggctgtggccaatcaccacgatgacc 900 Query: 557 tcaaccttgagcgcgcagacggcgtattcgatggccgatccaacaccggcgtacttgttc 616 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 899 tcaaccttgagcgcgcagacggcgtattcgatggccgatccaacaccggcgtacttgttc 840 Query: 617 ttgcagtaggccgggaccatgttggcgatg 646 |||||||||||||||||||||||||||||| Sbjct: 839 ttgcagtaggccgggaccatgttggcgatg 810
>ref|NM_192260.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 819 Score = 400 bits (202), Expect = e-108 Identities = 343/390 (87%) Strand = Plus / Minus Query: 257 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 316 |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| Sbjct: 797 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 738 Query: 317 tccttgacgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctcc 376 ||||||||||||||||||||| |||||||| ||||| ||| ||||||||||||||| Sbjct: 737 tccttgacgaacgggtaggtcttgaggttctccagggattggttcacggcctccttctcc 678 Query: 377 aggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttg 436 | || || ||| |||||||||||||||| |||||| ||| ||||| |||||||||||| Sbjct: 677 aagatggcgcattggtcatcgaaaggcagcgaggcgtgctcggtctgaaccttcttcttg 618 Query: 437 gccgggaacccgatcctgacccagtcctcaacgaagtggaaggagtcgtctgcgccatcc 496 || ||||| ||| |||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 617 gcggggaaaccggtcctgacccagtcctcgacgaagtggaaggagtctggtgctccatcc 558 Query: 497 ttgagcgagagcagagccttgattccaccgcagcggctgtggccaatcaccacgatgacc 556 ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 557 ttgagtgagaggagggccttgattccaccgcagcggctgtggccaatcaccacgatgagt 498 Query: 557 tcaaccttgagcgcgcagacggcgtattcgatggccgatccaacaccggcgtacttgttc 616 || |||||||| |||||||||||||| ||||||||||| || || || |||| |||| || Sbjct: 497 tcgaccttgagggcgcagacggcgtactcgatggccgacccgacgccagcgtgcttgatc 438 Query: 617 ttgcagtaggccgggaccatgttggcgatg 646 |||||||| || |||||||||||||||||| Sbjct: 437 ttgcagtaagctgggaccatgttggcgatg 408
>dbj|AK099825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102G17, full insert sequence Length = 1163 Score = 400 bits (202), Expect = e-108 Identities = 343/390 (87%) Strand = Plus / Minus Query: 257 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 316 |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| Sbjct: 847 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 788 Query: 317 tccttgacgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctcc 376 ||||||||||||||||||||| |||||||| ||||| ||| ||||||||||||||| Sbjct: 787 tccttgacgaacgggtaggtcttgaggttctccagggattggttcacggcctccttctcc 728 Query: 377 aggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttg 436 | || || ||| |||||||||||||||| |||||| ||| ||||| |||||||||||| Sbjct: 727 aagatggcgcattggtcatcgaaaggcagcgaggcgtgctcggtctgaaccttcttcttg 668 Query: 437 gccgggaacccgatcctgacccagtcctcaacgaagtggaaggagtcgtctgcgccatcc 496 || ||||| ||| |||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 667 gcggggaaaccggtcctgacccagtcctcgacgaagtggaaggagtctggtgctccatcc 608 Query: 497 ttgagcgagagcagagccttgattccaccgcagcggctgtggccaatcaccacgatgacc 556 ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 607 ttgagtgagaggagggccttgattccaccgcagcggctgtggccaatcaccacgatgagt 548 Query: 557 tcaaccttgagcgcgcagacggcgtattcgatggccgatccaacaccggcgtacttgttc 616 || |||||||| |||||||||||||| ||||||||||| || || || |||| |||| || Sbjct: 547 tcgaccttgagggcgcagacggcgtactcgatggccgacccgacgccagcgtgcttgatc 488 Query: 617 ttgcagtaggccgggaccatgttggcgatg 646 |||||||| || |||||||||||||||||| Sbjct: 487 ttgcagtaagctgggaccatgttggcgatg 458
>dbj|AK060890.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-B12, full insert sequence Length = 1165 Score = 400 bits (202), Expect = e-108 Identities = 343/390 (87%) Strand = Plus / Minus Query: 257 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 316 |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| Sbjct: 846 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 787 Query: 317 tccttgacgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctcc 376 ||||||||||||||||||||| |||||||| ||||| ||| ||||||||||||||| Sbjct: 786 tccttgacgaacgggtaggtcttgaggttctccagggattggttcacggcctccttctcc 727 Query: 377 aggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttg 436 | || || ||| |||||||||||||||| |||||| ||| ||||| |||||||||||| Sbjct: 726 aagatggcgcattggtcatcgaaaggcagcgaggcgtgctcggtctgaaccttcttcttg 667 Query: 437 gccgggaacccgatcctgacccagtcctcaacgaagtggaaggagtcgtctgcgccatcc 496 || ||||| ||| |||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 666 gcggggaaaccggtcctgacccagtcctcgacgaagtggaaggagtctggtgctccatcc 607 Query: 497 ttgagcgagagcagagccttgattccaccgcagcggctgtggccaatcaccacgatgacc 556 ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 606 ttgagtgagaggagggccttgattccaccgcagcggctgtggccaatcaccacgatgagt 547 Query: 557 tcaaccttgagcgcgcagacggcgtattcgatggccgatccaacaccggcgtacttgttc 616 || |||||||| |||||||||||||| ||||||||||| || || || |||| |||| || Sbjct: 546 tcgaccttgagggcgcagacggcgtactcgatggccgacccgacgccagcgtgcttgatc 487 Query: 617 ttgcagtaggccgggaccatgttggcgatg 646 |||||||| || |||||||||||||||||| Sbjct: 486 ttgcagtaagctgggaccatgttggcgatg 457
>gb|AF182806.1|AF182806 Oryza sativa carbonic anhydrase 3 mRNA, complete cds Length = 1169 Score = 400 bits (202), Expect = e-108 Identities = 343/390 (87%) Strand = Plus / Minus Query: 257 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 316 |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| Sbjct: 841 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 782 Query: 317 tccttgacgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctcc 376 ||||||||||||||||||||| |||||||| ||||| ||| ||||||||||||||| Sbjct: 781 tccttgacgaacgggtaggtcttgaggttctccagggattggttcacggcctccttctcc 722 Query: 377 aggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttg 436 | || || ||| |||||||||||||||| |||||| ||| ||||| |||||||||||| Sbjct: 721 aagatggcgcattggtcatcgaaaggcagcgaggcgtgctcggtctgaaccttcttcttg 662 Query: 437 gccgggaacccgatcctgacccagtcctcaacgaagtggaaggagtcgtctgcgccatcc 496 || ||||| ||| |||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 661 gcggggaaaccggtcctgacccagtcctcgacgaagtggaaggagtctggtgctccatcc 602 Query: 497 ttgagcgagagcagagccttgattccaccgcagcggctgtggccaatcaccacgatgacc 556 ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 601 ttgagtgagaggagggccttgattccaccgcagcggctgtggccaatcaccacgatgagt 542 Query: 557 tcaaccttgagcgcgcagacggcgtattcgatggccgatccaacaccggcgtacttgttc 616 || |||||||| |||||||||||||| ||||||||||| || || || |||| |||| || Sbjct: 541 tcgaccttgagggcgcagacggcgtactcgatggccgacccgacgccagcgtgcttgatc 482 Query: 617 ttgcagtaggccgggaccatgttggcgatg 646 |||||||| || |||||||||||||||||| Sbjct: 481 ttgcagtaagctgggaccatgttggcgatg 452
>gb|U08404.1|OSU08404 Oryza sativa chloroplast carbonic anhydrase mRNA, complete cds Length = 1148 Score = 400 bits (202), Expect = e-108 Identities = 343/390 (87%) Strand = Plus / Minus Query: 257 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 316 |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| Sbjct: 832 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 773 Query: 317 tccttgacgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctcc 376 ||||||||||||||||||||| |||||||| ||||| ||| ||||||||||||||| Sbjct: 772 tccttgacgaacgggtaggtcttgaggttctccagggattggttcacggcctccttctcc 713 Query: 377 aggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttg 436 | || || ||| |||||||||||||||| |||||| ||| ||||| |||||||||||| Sbjct: 712 aagatggcgcattggtcatcgaaaggcagcgaggcgtgctcggtctgaaccttcttcttg 653 Query: 437 gccgggaacccgatcctgacccagtcctcaacgaagtggaaggagtcgtctgcgccatcc 496 || ||||| ||| |||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 652 gcggggaaaccggtcctgacccagtcctcgacgaagtggaaggagtctggtgctccatcc 593 Query: 497 ttgagcgagagcagagccttgattccaccgcagcggctgtggccaatcaccacgatgacc 556 ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 592 ttgagtgagaggagggccttgattccaccgcagcggctgtggccaatcaccacgatgagt 533 Query: 557 tcaaccttgagcgcgcagacggcgtattcgatggccgatccaacaccggcgtacttgttc 616 || |||||||| |||||||||||||| ||||||||||| || || || |||| |||| || Sbjct: 532 tcgaccttgagggcgcagacggcgtactcgatggccgacccgacgccagcgtgcttgatc 473 Query: 617 ttgcagtaggccgggaccatgttggcgatg 646 |||||||| || |||||||||||||||||| Sbjct: 472 ttgcagtaagctgggaccatgttggcgatg 443
>gb|AY109272.1| Zea mays PCO064414 mRNA sequence Length = 978 Score = 260 bits (131), Expect = 5e-66 Identities = 323/387 (83%) Strand = Plus / Minus Query: 260 ccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctcc 319 ||||| ||||||||||||||| ||||||| ||||||||||| || |||| || || ||| Sbjct: 719 ccggacacgaagtcgtagtgggcgccgaccagcttgagggtccccttggccagcccttcc 660 Query: 320 ttgacgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctccagg 379 | |||||| ||||||||| |||||||| ||||||||||| |||||||||||||||||| Sbjct: 659 tggacgaaggggtaggtcttgaggttctccagggacacgttcacggcctccttctccagg 600 Query: 380 acggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttggcc 439 | || ||||||||||||||| |||| ||||||| ||| ||| |||||| |||||| Sbjct: 599 atggagcactggtcatcgaagggcacggaggcgtgctctttcttcaccttgaccttggca 540 Query: 440 gggaacccgatcctgacccagtcctcaacgaagtggaaggagtcgtctgcgccatccttg 499 ||||| |||||| ||||||||| ||| |||||||||||| |||| ||| || |||| | Sbjct: 539 gggaagccgatcttgacccagttctcgacgaagtggaagttgtcgggtgcaccgtcctgg 480 Query: 500 agcgagagcagagccttgattccaccgcagcggctgtggccaatcaccacgatgacctca 559 || |||||||| ||| ||| |||||||||| ||||||||| || ||||||| |||||| Sbjct: 479 agggagagcagcgcccggatgccaccgcagcagctgtggccgatgaccacgaggacctcc 420 Query: 560 accttgagcgcgcagacggcgtattcgatggccgatccaacaccggcgtacttgttcttg 619 |||||||| ||||| |||||||| |||||||| || || | |||| ||||||| ||||| Sbjct: 419 accttgagggcgcacacggcgtactcgatggcggacccgatgccggtgtacttggtcttg 360 Query: 620 cagtaggccgggaccatgttggcgatg 646 |||||||||||||||| ||||||| Sbjct: 359 tcgtaggccgggaccatggcggcgatg 333
>gb|U08403.1|ZMU08403 Zea mays Golden Bantam carbonic anhydrase mRNA, complete cds Length = 2184 Score = 224 bits (113), Expect = 3e-55 Identities = 269/321 (83%) Strand = Plus / Minus Query: 317 tccttgacgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctcc 376 ||||||||||| |||||| || |||||||||||| |||||||| ||||||||||||||| Sbjct: 671 tccttgacgaaggggtagctcttgaggttctggagcgacacgttcacggcctccttctcc 612 Query: 377 aggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttg 436 |||| || ||||||||||||||| |||| ||| ||| ||| ||| |||||| |||||| Sbjct: 611 aggatggagcactggtcatcgaacggcacggacgcgtgctctttcttcaccttgttcttg 552 Query: 437 gccgggaacccgatcctgacccagtcctcaacgaagtggaaggagtcgtctgcgccatcc 496 || ||| |||||||||||||||||||| |||||| |||| |||| ||||| ||| Sbjct: 551 gcagggctgccgatcctgacccagtcctccacgaaggtgaagttgtcgggcgcgccgtcc 492 Query: 497 ttgagcgagagcagagccttgattccaccgcagcggctgtggccaatcaccacgatgacc 556 ||||| ||||| || ||| |||| |||||||||| |||||||||||| |||||||||||| Sbjct: 491 ttgagggagaggagcgccctgatgccaccgcagcagctgtggccaatgaccacgatgacc 432 Query: 557 tcaaccttgagcgcgcagacggcgtattcgatggccgatccaacaccggcgtacttgttc 616 | |||||||||||||| |||||||| |||||||| || || |||||||||||| || Sbjct: 431 tgcaccttgagcgcgcacacggcgtactcgatggcggaccctgtgccggcgtacttgatc 372 Query: 617 ttgcagtaggccgggaccatg 637 ||| ||||| ||||||||| Sbjct: 371 ttgtcgtagggtgggaccatg 351 Score = 210 bits (106), Expect = 4e-51 Identities = 274/330 (83%) Strand = Plus / Minus Query: 317 tccttgacgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctcc 376 |||||||| || |||||| || |||||||||||| |||||||| ||||||||||||||| Sbjct: 1277 tccttgaccaaggggtagctcttgaggttctggagcgacacgttcacggcctccttctcc 1218 Query: 377 aggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttg 436 |||| || ||||||||||||||| |||| ||| ||| ||| ||| |||||| |||||| Sbjct: 1217 aggatggagcactggtcatcgaacggcacggacgcgtgctctttcttcaccttgttcttg 1158 Query: 437 gccgggaacccgatcctgacccagtcctcaacgaagtggaaggagtcgtctgcgccatcc 496 || ||| |||||||||||||||||||| |||||||||||| |||| ||||| ||| Sbjct: 1157 gcagggctgccgatcctgacccagtcctccacgaagtggaagttgtcgggcgcgccgtcc 1098 Query: 497 ttgagcgagagcagagccttgattccaccgcagcggctgtggccaatcaccacgatgacc 556 ||||| ||||| || ||| |||| |||||||||| ||| |||||||| ||||||| |||| Sbjct: 1097 ttgagggagaggagcgccctgatgccaccgcagcagctatggccaatgaccacgaggacc 1038 Query: 557 tcaaccttgagcgcgcagacggcgtattcgatggccgatccaacaccggcgtacttgttc 616 || |||||||| ||||| || ||||| |||||||| || || | |||| ||||||| || Sbjct: 1037 tccaccttgagggcgcacacagcgtactcgatggcggacccgatgccggtgtacttggtc 978 Query: 617 ttgcagtaggccgggaccatgttggcgatg 646 ||| |||| | ||||||||| ||||||| Sbjct: 977 ttgtcgtagcctgggaccatggcggcgatg 948 Score = 174 bits (88), Expect = 2e-40 Identities = 310/384 (80%) Strand = Plus / Minus Query: 263 gagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctccttg 322 ||||| |||||||||||| |||||| ||||||||||| || || | | || |||||| Sbjct: 1934 gagacaaagtcgtagtgggcgccgatcagcttgagggtcccatttgcaagcccttccttg 1875 Query: 323 acgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctccaggacg 382 ||||| ||||||||| |||||||| ||||||||||| |||||||||||||| || | | Sbjct: 1874 acgaaggggtaggtcttgaggttctccagggacacgttcacggcctccttctcgagaatg 1815 Query: 383 gtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttggccggg 442 | |||||||||||||| |||| |||||| ||| ||| |||||| ||||||| | Sbjct: 1814 gaccactggtcatcgaacggcaccgaggcgtgctctttctttaccttcatcttggcaatg 1755 Query: 443 aacccgatcctgacccagtcctcaacgaagtggaaggagtcgtctgcgccatccttgagc 502 || ||||| | ||||||||||| ||||||||||||| ||| |||||| |||| ||| Sbjct: 1754 aaggcgatcttaacccagtcctcgacgaagtggaaggtgtcaggtgcgccgtcctggagt 1695 Query: 503 gagagcagagccttgattccaccgcagcggctgtggccaatcaccacgatgacctcaacc 562 ||||| || ||| |||| |||||||||| ||| |||||||| ||||||| |||||| ||| Sbjct: 1694 gagaggagcgccctgatgccaccgcagcagctatggccaatgaccacgaggacctccacc 1635 Query: 563 ttgagcgcgcagacggcgtattcgatggccgatccaacaccggcgtacttgttcttgcag 622 ||||| ||||| || ||||| |||||||| || || | |||| ||||||| ||||| | Sbjct: 1634 ttgagggcgcacacagcgtactcgatggcggacccgatgccggtgtacttggtcttgtcg 1575 Query: 623 taggccgggaccatgttggcgatg 646 ||| | ||||||||| ||||||| Sbjct: 1574 tagccggggaccatggcggcgatg 1551
>gb|U08401.1|ZMU08401 Zea mays carbonic anhydrase mRNA, complete cds Length = 1920 Score = 224 bits (113), Expect = 3e-55 Identities = 269/321 (83%) Strand = Plus / Minus Query: 317 tccttgacgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctcc 376 ||||||||||| |||||| || |||||||||||| |||||||| ||||||||||||||| Sbjct: 950 tccttgacgaaggggtagctcttgaggttctggagcgacacgttcacggcctccttctcc 891 Query: 377 aggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttg 436 |||| || ||||||||||||||| |||| ||| ||| ||| ||| |||||| |||||| Sbjct: 890 aggatggagcactggtcatcgaacggcacggacgcgtgctctttcttcaccttgttcttg 831 Query: 437 gccgggaacccgatcctgacccagtcctcaacgaagtggaaggagtcgtctgcgccatcc 496 || ||| |||||||||||||||||||| |||||| |||| |||| ||||| ||| Sbjct: 830 gcagggctgccgatcctgacccagtcctccacgaaggtgaagttgtcgggcgcgccgtcc 771 Query: 497 ttgagcgagagcagagccttgattccaccgcagcggctgtggccaatcaccacgatgacc 556 ||||| ||||| || ||| |||| |||||||||| |||||||||||| |||||||||||| Sbjct: 770 ttgagggagaggagcgccctgatgccaccgcagcagctgtggccaatgaccacgatgacc 711 Query: 557 tcaaccttgagcgcgcagacggcgtattcgatggccgatccaacaccggcgtacttgttc 616 | |||||||||||||| |||||||| |||||||| || || |||||||||||| || Sbjct: 710 tgcaccttgagcgcgcacacggcgtactcgatggcggaccctgtgccggcgtacttgatc 651 Query: 617 ttgcagtaggccgggaccatg 637 ||| ||||| ||||||||| Sbjct: 650 ttgtcgtagggtgggaccatg 630 Score = 198 bits (100), Expect = 2e-47 Identities = 313/384 (81%) Strand = Plus / Minus Query: 263 gagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctccttg 322 ||||| |||||||||||| |||||| ||||||||||| || || | | || |||||| Sbjct: 1610 gagacaaagtcgtagtgggcgccgatcagcttgagggtcccatttgcaagcccttccttg 1551 Query: 323 acgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctccaggacg 382 ||||| ||||||||| |||||||| ||||||||||| |||||||||||||| || | | Sbjct: 1550 acgaaggggtaggtcttgaggttctccagggacacgttcacggcctccttctcgagaatg 1491 Query: 383 gtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttggccggg 442 | ||||||||||||||| |||| |||||| ||| ||| |||||| ||||||| | Sbjct: 1490 gagcactggtcatcgaacggcaccgaggcgtgctctttctttaccttcatcttggcaatg 1431 Query: 443 aacccgatcctgacccagtcctcaacgaagtggaaggagtcgtctgcgccatccttgagc 502 || |||||| | ||||||||||| ||||||||||||| || | ||||||| |||| ||| Sbjct: 1430 aagccgatcttaacccagtcctcgacgaagtggaaggtgtaggctgcgccgtcctggagt 1371 Query: 503 gagagcagagccttgattccaccgcagcggctgtggccaatcaccacgatgacctcaacc 562 ||||| || ||| |||| |||||||||| ||| |||||||| ||||||| |||||| ||| Sbjct: 1370 gagaggagcgccctgatgccaccgcagcagctatggccaatgaccacgaggacctccacc 1311 Query: 563 ttgagcgcgcagacggcgtattcgatggccgatccaacaccggcgtacttgttcttgcag 622 ||||| ||||| || ||||| |||||||| || || | |||| ||||||| ||||| | Sbjct: 1310 ttgagggcgcacacagcgtactcgatggcggacccgatgccggtgtacttggtcttgtcg 1251 Query: 623 taggccgggaccatgttggcgatg 646 ||| | ||||||||| ||||||| Sbjct: 1250 tagcctgggaccatggcggcgatg 1227
>gb|AY109373.1| Zea mays CL2331_1 mRNA sequence Length = 2552 Score = 190 bits (96), Expect = 4e-45 Identities = 312/384 (81%) Strand = Plus / Minus Query: 263 gagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctccttg 322 ||||| |||||||||||| |||||| ||||||||||| || || | | || |||||| Sbjct: 1610 gagacaaagtcgtagtgggcgccgatcagcttgagggtcccatttgcaagcccttccttg 1551 Query: 323 acgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctccaggacg 382 ||||| ||||||||| |||||||| ||||||||||| |||||||||||||| || | | Sbjct: 1550 acgaaggggtaggtcttgaggttctccagggacacgttcacggcctccttctcgagaatg 1491 Query: 383 gtgcactggtcatcgaaaggcatggaggcgcactcagtctgcaccttcttcttggccggg 442 | ||||||||||||||| |||| |||||| ||| ||| |||||| ||||||| | Sbjct: 1490 gagcactggtcatcgaacggcaccgaggcgtgctctttctttaccttcatcttggcaatg 1431 Query: 443 aacccgatcctgacccagtcctcaacgaagtggaaggagtcgtctgcgccatccttgagc 502 || |||||| | ||||||||||| ||||||||||||| ||| |||||| |||| ||| Sbjct: 1430 aagccgatcttaacccagtcctcgacgaagtggaaggtgtcaggtgcgccgtcctggagg 1371 Query: 503 gagagcagagccttgattccaccgcagcggctgtggccaatcaccacgatgacctcaacc 562 ||||| || ||| |||| |||||||||| ||| |||||||| ||||||| |||||| ||| Sbjct: 1370 gagaggagcgccctgatgccaccgcagcagctatggccaatgaccacgaggacctccacc 1311 Query: 563 ttgagcgcgcagacggcgtattcgatggccgatccaacaccggcgtacttgttcttgcag 622 ||||| ||||| || ||||| |||||||| || || | |||| ||||||| ||||| | Sbjct: 1310 ttgagggcgcacacagcgtactcgatggcggacccgatgccggtgtacttggtcttgtcg 1251 Query: 623 taggccgggaccatgttggcgatg 646 ||| | ||||||||| ||||||| Sbjct: 1250 tagcctgggaccatggcggcgatg 1227 Score = 174 bits (88), Expect = 2e-40 Identities = 226/272 (83%) Strand = Plus / Minus Query: 366 cctccttctccaggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgca 425 ||||||||||||||| || ||||||||||||||| |||| ||| ||| ||| ||| || Sbjct: 901 cctccttctccaggatggagcactggtcatcgaacggcacggacgcgtgctctttcttca 842 Query: 426 ccttcttcttggccgggaacccgatcctgacccagtcctcaacgaagtggaaggagtcgt 485 |||| |||||||| ||| |||||||||||||||||||| |||||| |||| |||| Sbjct: 841 ccttgttcttggcagggctgccgatcctgacccagtcctccacgaaggtgaagttgtcgg 782 Query: 486 ctgcgccatccttgagcgagagcagagccttgattccaccgcagcggctgtggccaatca 545 ||||| |||||||| ||||| || ||| |||| |||||||||| |||||||||||| | Sbjct: 781 gcgcgccgtccttgagggagaggagcgccctgatgccaccgcagcagctgtggccaatga 722 Query: 546 ccacgatgacctcaaccttgagcgcgcagacggcgtattcgatggccgatccaacaccgg 605 |||||||||||| |||||||||||||| |||||||| |||||||| || || |||| Sbjct: 721 ccacgatgacctgcaccttgagcgcgcacacggcgtactcgatggcggaccctgtgccgg 662 Query: 606 cgtacttgttcttgcagtaggccgggaccatg 637 |||||||| ||||| ||||| ||||||||| Sbjct: 661 cgtacttgatcttgtcgtagggtgggaccatg 630
>gb|U19741.1|UPU19741 Urochloa panicoides carbonic anhydrase 1 mRNA, complete cds Length = 1208 Score = 133 bits (67), Expect = 8e-28 Identities = 142/167 (85%) Strand = Plus / Minus Query: 425 accttcttcttggccgggaacccgatcctgacccagtcctcaacgaagtggaaggagtcg 484 |||||||||||||| |||| |||||||||||||||||||| |||||||||||| |||| Sbjct: 704 accttcttcttggcgaggaagccgatcctgacccagtcctcgacgaagtggaagttgtcg 645 Query: 485 tctgcgccatccttgagcgagagcagagccttgattccaccgcagcggctgtggccaatc 544 ||||||| |||| | ||||| || |||||||| |||||||||||||||||||| || Sbjct: 644 gctgcgccgtcctgcattgagaggagcgccttgatgccaccgcagcggctgtggccgatg 585 Query: 545 accacgatgacctcaaccttgagcgcgcagacggcgtattcgatggc 591 || || ||||| |||||||| |||||||||||||| |||||||| Sbjct: 584 acggtgaggaccttgaccttgagggcgcagacggcgtactcgatggc 538 Score = 125 bits (63), Expect = 2e-25 Identities = 117/135 (86%) Strand = Plus / Minus Query: 265 gacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctccttgac 324 |||||||||||||||||||||||| |||||||||| ||||||| |||||| ||||| || Sbjct: 864 gacgaagtcgtagtggccgccgaccagcttgagggagccgttggacacaccttccttcac 805 Query: 325 gaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctccaggacggt 384 | |||||||||| |||||| | ||||| |||||||||||||||||||||| || || Sbjct: 804 ccaggggtaggtcaggaggttgtacagggagacgttgacggcctccttctccaagatgga 745 Query: 385 gcactggtcatcgaa 399 ||||||||| ||||| Sbjct: 744 gcactggtcgtcgaa 730
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 125 bits (63), Expect = 2e-25 Identities = 84/91 (92%) Strand = Plus / Minus Query: 257 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 316 |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| Sbjct: 25698466 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 25698407 Query: 317 tccttgacgaacgggtaggtcaagaggttct 347 ||||||||||||||||||||| |||||||| Sbjct: 25698406 tccttgacgaacgggtaggtcttgaggttct 25698376 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Minus Query: 491 ccatccttgagcgagagcagagccttgattccaccgcagcggctgtggccaatcaccacg 550 ||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 25697883 ccatccttgagtgagaggagggccttgattccaccgcagcggctgtggccaatcaccacg 25697824 Query: 551 atga 554 |||| Sbjct: 25697823 atga 25697820 Score = 101 bits (51), Expect = 3e-18 Identities = 93/107 (86%) Strand = Plus / Minus Query: 369 ccttctccaggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcacct 428 ||||||||| || || ||| |||||||||||||||| |||||| ||| ||||| |||| Sbjct: 25698164 ccttctccaagatggcgcattggtcatcgaaaggcagcgaggcgtgctcggtctgaacct 25698105 Query: 429 tcttcttggccgggaacccgatcctgacccagtcctcaacgaagtgg 475 |||||||||| ||||| ||| |||||||||||||||| ||||||||| Sbjct: 25698104 tcttcttggcggggaaaccggtcctgacccagtcctcgacgaagtgg 25698058 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 560 accttgagcgcgcagacggcgtattcgatggccga 594 |||||||| |||||||||||||| ||||||||||| Sbjct: 25697360 accttgagggcgcagacggcgtactcgatggccga 25697326 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 616 cttgcagtaggccgggaccatgttggcgatg 646 ||||||||| || |||||||||||||||||| Sbjct: 25697182 cttgcagtaagctgggaccatgttggcgatg 25697152 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 513 ccttgattccaccgcagcggctgtggccaatcac 546 ||||||||||||| |||| |||||| |||||||| Sbjct: 25709583 ccttgattccaccacagcagctgtgaccaatcac 25709550
>dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0004A09 Length = 158826 Score = 125 bits (63), Expect = 2e-25 Identities = 84/91 (92%) Strand = Plus / Minus Query: 257 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 316 |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| Sbjct: 145272 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 145213 Query: 317 tccttgacgaacgggtaggtcaagaggttct 347 ||||||||||||||||||||| |||||||| Sbjct: 145212 tccttgacgaacgggtaggtcttgaggttct 145182 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Minus Query: 491 ccatccttgagcgagagcagagccttgattccaccgcagcggctgtggccaatcaccacg 550 ||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 144689 ccatccttgagtgagaggagggccttgattccaccgcagcggctgtggccaatcaccacg 144630 Query: 551 atga 554 |||| Sbjct: 144629 atga 144626 Score = 101 bits (51), Expect = 3e-18 Identities = 93/107 (86%) Strand = Plus / Minus Query: 369 ccttctccaggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcacct 428 ||||||||| || || ||| |||||||||||||||| |||||| ||| ||||| |||| Sbjct: 144970 ccttctccaagatggcgcattggtcatcgaaaggcagcgaggcgtgctcggtctgaacct 144911 Query: 429 tcttcttggccgggaacccgatcctgacccagtcctcaacgaagtgg 475 |||||||||| ||||| ||| |||||||||||||||| ||||||||| Sbjct: 144910 tcttcttggcggggaaaccggtcctgacccagtcctcgacgaagtgg 144864 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 560 accttgagcgcgcagacggcgtattcgatggccga 594 |||||||| |||||||||||||| ||||||||||| Sbjct: 144166 accttgagggcgcagacggcgtactcgatggccga 144132 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 616 cttgcagtaggccgggaccatgttggcgatg 646 ||||||||| || |||||||||||||||||| Sbjct: 143988 cttgcagtaagctgggaccatgttggcgatg 143958 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 513 ccttgattccaccgcagcggctgtggccaatcac 546 ||||||||||||| |||| |||||| |||||||| Sbjct: 156389 ccttgattccaccacagcagctgtgaccaatcac 156356
>dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0039G05 Length = 138429 Score = 125 bits (63), Expect = 2e-25 Identities = 84/91 (92%) Strand = Plus / Minus Query: 257 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 316 |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| Sbjct: 930 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 871 Query: 317 tccttgacgaacgggtaggtcaagaggttct 347 ||||||||||||||||||||| |||||||| Sbjct: 870 tccttgacgaacgggtaggtcttgaggttct 840 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Minus Query: 491 ccatccttgagcgagagcagagccttgattccaccgcagcggctgtggccaatcaccacg 550 ||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 347 ccatccttgagtgagaggagggccttgattccaccgcagcggctgtggccaatcaccacg 288 Query: 551 atga 554 |||| Sbjct: 287 atga 284 Score = 101 bits (51), Expect = 3e-18 Identities = 93/107 (86%) Strand = Plus / Minus Query: 369 ccttctccaggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcacct 428 ||||||||| || || ||| |||||||||||||||| |||||| ||| ||||| |||| Sbjct: 628 ccttctccaagatggcgcattggtcatcgaaaggcagcgaggcgtgctcggtctgaacct 569 Query: 429 tcttcttggccgggaacccgatcctgacccagtcctcaacgaagtgg 475 |||||||||| ||||| ||| |||||||||||||||| ||||||||| Sbjct: 568 tcttcttggcggggaaaccggtcctgacccagtcctcgacgaagtgg 522 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 513 ccttgattccaccgcagcggctgtggccaatcac 546 ||||||||||||| |||| |||||| |||||||| Sbjct: 12047 ccttgattccaccacagcagctgtgaccaatcac 12014
>gb|U19739.1|UPU19739 Urochloa panicoides carbonic anhydrase 2 mRNA, complete cds Length = 1034 Score = 125 bits (63), Expect = 2e-25 Identities = 117/135 (86%) Strand = Plus / Minus Query: 265 gacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctccttgac 324 |||||||||||||||||||||||| |||||||||| ||||||| ||| || ||||| || Sbjct: 703 gacgaagtcgtagtggccgccgaccagcttgagggacccgttggacacgccttccttcac 644 Query: 325 gaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctccaggacggt 384 | |||||||||| |||||| | |||||| |||||||| ||||||||||||| || || Sbjct: 643 ccaggggtaggtcaggaggttgtagagggagacgttgactgcctccttctccaagatgga 584 Query: 385 gcactggtcatcgaa 399 ||||||||||||||| Sbjct: 583 gcactggtcatcgaa 569 Score = 125 bits (63), Expect = 2e-25 Identities = 141/167 (84%) Strand = Plus / Minus Query: 425 accttcttcttggccgggaacccgatcctgacccagtcctcaacgaagtggaaggagtcg 484 ||||||||||| || |||| |||||||||||||| ||||| |||||||||||| |||| Sbjct: 543 accttcttcttcgcgaggaagccgatcctgacccaatcctcgacgaagtggaagttgtcg 484 Query: 485 tctgcgccatccttgagcgagagcagagccttgattccaccgcagcggctgtggccaatc 544 |||||||||||| | ||||| || |||||||| |||||||||||||||||||| || Sbjct: 483 gctgcgccatcctgcatggagaggagcgccttgatgccaccgcagcggctgtggccgatg 424 Query: 545 accacgatgacctcaaccttgagcgcgcagacggcgtattcgatggc 591 || || ||||| |||||||| |||||||||||||| |||||||| Sbjct: 423 acggtgaggaccttgaccttgagggcgcagacggcgtactcgatggc 377
>dbj|AB016283.1| Oryza sativa gene for carbonic anhydrase, complete cds Length = 8532 Score = 125 bits (63), Expect = 2e-25 Identities = 84/91 (92%) Strand = Plus / Minus Query: 257 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccc 316 |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| Sbjct: 8047 ttgccggagacgaagtcgtagtggccgccgacgagcttgagggtgccgttggcgatcccc 7988 Query: 317 tccttgacgaacgggtaggtcaagaggttct 347 ||||||||||||||||||||| |||||||| Sbjct: 7987 tccttgacgaacgggtaggtcttgaggttct 7957 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Minus Query: 491 ccatccttgagcgagagcagagccttgattccaccgcagcggctgtggccaatcaccacg 550 ||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 7464 ccatccttgagtgagaggagggccttgattccaccgcagcggctgtggccaatcaccacg 7405 Query: 551 atga 554 |||| Sbjct: 7404 atga 7401 Score = 101 bits (51), Expect = 3e-18 Identities = 93/107 (86%) Strand = Plus / Minus Query: 369 ccttctccaggacggtgcactggtcatcgaaaggcatggaggcgcactcagtctgcacct 428 ||||||||| || || ||| |||||||||||||||| |||||| ||| ||||| |||| Sbjct: 7745 ccttctccaagatggcgcattggtcatcgaaaggcagcgaggcgtgctcggtctgaacct 7686 Query: 429 tcttcttggccgggaacccgatcctgacccagtcctcaacgaagtgg 475 |||||||||| ||||| ||| |||||||||||||||| ||||||||| Sbjct: 7685 tcttcttggcggggaaaccggtcctgacccagtcctcgacgaagtgg 7639 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 560 accttgagcgcgcagacggcgtattcgatggccga 594 |||||||| |||||||||||||| ||||||||||| Sbjct: 6941 accttgagggcgcagacggcgtactcgatggccga 6907 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 616 cttgcagtaggccgggaccatgttggcgatg 646 ||||||||| || |||||||||||||||||| Sbjct: 6763 cttgcagtaagctgggaccatgttggcgatg 6733
>gb|AY107300.1| Zea mays PCO064410 mRNA sequence Length = 397 Score = 99.6 bits (50), Expect = 1e-17 Identities = 89/102 (87%) Strand = Plus / Minus Query: 545 accacgatgacctcaaccttgagcgcgcagacggcgtattcgatggccgatccaacaccg 604 |||||||||||||| |||||||| |||||||||||||| |||||||| || || || ||| Sbjct: 394 accacgatgacctccaccttgagggcgcagacggcgtactcgatggcggagccgacgccg 335 Query: 605 gcgtacttgttcttgcagtaggccgggaccatgttggcgatg 646 ||||||||| ||||| ||||| ||| |||||| |||||||| Sbjct: 334 gcgtacttggtcttgtcgtagggcggcaccatgctggcgatg 293
>gb|M95073.1|MZEORFN Zea mays putative carbonic anhydrase homolog mRNA, partial cds Length = 210 Score = 97.6 bits (49), Expect = 4e-17 Identities = 115/137 (83%) Strand = Plus / Minus Query: 263 gagacgaagtcgtagtggccgccgacgagcttgagggttccgttggtcacaccctccttg 322 ||||| |||||||||||| |||||| ||||||||||| || || | | || |||||| Sbjct: 171 gagacaaagtcgtagtgggcgccgatcagcttgagggtcccatttgcaagcccttccttg 112 Query: 323 acgaacgggtaggtcaagaggttctggagggacacgttgacggcctccttctccaggacg 382 ||||| ||||||||| |||||||| ||||||||||| |||||||||||||| || | | Sbjct: 111 acgaaggggtaggtcttgaggttctccagggacacgttcacggcctccttctcgagaatg 52 Query: 383 gtgcactggtcatcgaa 399 | ||||||||||||||| Sbjct: 51 gagcactggtcatcgaa 35
>emb|AJ547634.1|PVU547634 Phaseolus vulgaris partial mRNA for carbonic anhydrase (ca gene) Length = 313 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 517 gattccaccgcagcggctgtggccaatcacca 548 ||||||||||||||| ||||||||||| |||| Sbjct: 52 gattccaccgcagcgactgtggccaataacca 21
>emb|AJ543754.1|LJA543754 Lotus japonicus mRNA for carbonic anhydrase (ca1 gene) Length = 1088 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 518 attccaccgcagcggctgtggccaat 543 |||||||||||||||||||| ||||| Sbjct: 531 attccaccgcagcggctgtgtccaat 506
>dbj|AP006093.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT47G03, TM0166, complete sequence Length = 97864 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 518 attccaccgcagcggctgtggccaat 543 |||||||||||||||||||| ||||| Sbjct: 24604 attccaccgcagcggctgtgtccaat 24579
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 512 gccttgattccaccgcagcggctgtggccaatcaccacgat 552 |||||||| |||||||| || | |||||| ||||||||||| Sbjct: 1761790 gccttgatgccaccgcaacgcccgtggcccatcaccacgat 1761830
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 526 gcagcggctgtggccaatcac 546 ||||||||||||||||||||| Sbjct: 1821237 gcagcggctgtggccaatcac 1821257
>ref|XM_838468.1| Leishmania major strain Friedlin hypothetical protein (LMJ_1386) partial mRNA Length = 4440 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 526 gcagcggctgtggccaatcac 546 ||||||||||||||||||||| Sbjct: 4371 gcagcggctgtggccaatcac 4391
>gb|AE009465.1| Brucella melitensis 16M chromosome I, section 22 of 195 of the complete sequence Length = 11987 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 512 gccttgattccaccgcagcggctgtggccaatcaccacgat 552 |||||||| |||||||| || | |||||| ||||||||||| Sbjct: 432 gccttgatgccaccgcaacgcccgtggcccatcaccacgat 392
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 512 gccttgattccaccgcagcggctgtggccaatcaccacgat 552 |||||||| |||||||| || | |||||| ||||||||||| Sbjct: 1778683 gccttgatgccaccgcaacgcccgtggcccatcaccacgat 1778723
>dbj|AP002373.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-212D19, complete sequence Length = 138197 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 191 tatatgtacgtttgtatatgt 211 ||||||||||||||||||||| Sbjct: 80852 tatatgtacgtttgtatatgt 80872
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 512 gccttgattccaccgcagcggctgtggccaatcaccacgat 552 |||||||| |||||||| || | |||||| ||||||||||| Sbjct: 1775830 gccttgatgccaccgcaacgcccgtggcccatcaccacgat 1775870
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 356 acgttgacggcctccttctccagga 380 |||||||||||||||||| |||||| Sbjct: 2833138 acgttgacggcctccttcgccagga 2833114
>ref|XM_467687.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1138 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 ggccgccgacgagcttgagg 298 |||||||||||||||||||| Sbjct: 102 ggccgccgacgagcttgagg 121
>ref|NM_196639.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0019M20.11), mRNA Length = 642 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 ggccgccgacgagcttgagg 298 |||||||||||||||||||| Sbjct: 189 ggccgccgacgagcttgagg 208
>gb|AE014841.1| Plasmodium falciparum 3D7 chromosome 11 section 6 of 8 of the complete sequence Length = 252420 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 tgatatatgtacgtttgtatatgt 211 |||||||||||| ||||||||||| Sbjct: 127219 tgatatatgtacatttgtatatgt 127196
>emb|AL079341.19|HSDJ319M7 Human DNA sequence from clone RP1-319M7 on chromosome 6p21.1-21.3 Contains the 5' end of the gene for a novel protein (contains KIAA1880 and FLJ32945), a TRK-fused gene (TFG) pseudogene and a CpG island, complete sequence Length = 128216 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ttctattgcttatggcaaat 100 |||||||||||||||||||| Sbjct: 55862 ttctattgcttatggcaaat 55881
>gb|AC128639.13| Papio anubis clone rp41-2d18, complete sequence Length = 173331 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 607 gtacttgttcttgcagtagg 626 |||||||||||||||||||| Sbjct: 144958 gtacttgttcttgcagtagg 144977
>gb|AC087545.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0019M20, complete sequence Length = 139421 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 ggccgccgacgagcttgagg 298 |||||||||||||||||||| Sbjct: 110220 ggccgccgacgagcttgagg 110239
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 ggccgccgacgagcttgagg 298 |||||||||||||||||||| Sbjct: 14930442 ggccgccgacgagcttgagg 14930461
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 ggccgccgacgagcttgagg 298 |||||||||||||||||||| Sbjct: 28350077 ggccgccgacgagcttgagg 28350096
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 ggccgccgacgagcttgagg 298 |||||||||||||||||||| Sbjct: 30832078 ggccgccgacgagcttgagg 30832097
>gb|AC018887.10| Homo sapiens BAC clone RP11-419E14 from 2, complete sequence Length = 189466 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 atatatgtacgtttgtatat 209 |||||||||||||||||||| Sbjct: 169067 atatatgtacgtttgtatat 169048
>dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0661G04 Length = 157292 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 ggccgccgacgagcttgagg 298 |||||||||||||||||||| Sbjct: 62655 ggccgccgacgagcttgagg 62674
>dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0623A10 Length = 156517 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 ggccgccgacgagcttgagg 298 |||||||||||||||||||| Sbjct: 148106 ggccgccgacgagcttgagg 148125
>dbj|AP005112.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684F11 Length = 147731 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 ggccgccgacgagcttgagg 298 |||||||||||||||||||| Sbjct: 15655 ggccgccgacgagcttgagg 15674
>dbj|AK108113.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-C02, full insert sequence Length = 1138 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 ggccgccgacgagcttgagg 298 |||||||||||||||||||| Sbjct: 102 ggccgccgacgagcttgagg 121
>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete sequence Length = 148644 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 ggccgccgacgagcttgagg 298 |||||||||||||||||||| Sbjct: 59918 ggccgccgacgagcttgagg 59937
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 ggccgccgacgagcttgagg 298 |||||||||||||||||||| Sbjct: 14938683 ggccgccgacgagcttgagg 14938702
>gb|AF018256.1|AF018256 Ambystoma tigrinum glutamate transporter 1 (sEAAT1) mRNA, complete cds Length = 1980 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 tctgcaccttcttcttggcc 439 |||||||||||||||||||| Sbjct: 265 tctgcaccttcttcttggcc 246 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,049,883 Number of Sequences: 3902068 Number of extensions: 4049883 Number of successful extensions: 66239 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 46 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 65874 Number of HSP's gapped (non-prelim): 352 length of query: 646 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 623 effective length of database: 17,143,297,704 effective search space: 10680274469592 effective search space used: 10680274469592 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
