ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal32m10 |
|---|---|
| Clone Library Name | barley_pub |
>PAP1_BRACM (Q94FZ9) Plastid lipid-associated protein 1, chloroplast precursor| Length = 327 Score = 48.9 bits (115), Expect = 1e-05 Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 56/203 (27%) Frame = -1 Query: 678 DRGAEATPEDKDRVDQIAQRLEEVSPTKEPLKSE-LLNGKWELLYTTSTSI--LQPQRPK 508 DRG A+ E + + ++ +LE +P P ++ LLNGKW L+YT+ + L +R Sbjct: 115 DRGLSASSETRAEISELITQLESKNPNPAPNEALFLLNGKWILVYTSFVGLFPLLSRRIS 174 Query: 507 FLRPYGTIYQAINTDTLRAQNME------------------------------------- 439 L I Q I++D+ N Sbjct: 175 PLVKVDEISQTIDSDSFTVHNSVRFASPLATTSLSTNAKFEVRSPKRVQVKFEQGVIGTP 234 Query: 438 ------TLPYFNQVTANLVPLNSRK---VAVRFDYFKIFSLIQIKAP-------GSGKGE 307 +P F +V + LN K +V+ + I + P S + Sbjct: 235 QLTDSIEIPEFVEVLGQKIDLNPIKGLLTSVQDTASSVARTISSQPPLKFSLPGDSAQSW 294 Query: 306 LEITYLDEELRVSRGDKGNLFVL 238 L TYLD++LR+SRGD G++FVL Sbjct: 295 LLTTYLDKDLRISRGDGGSVFVL 317
>PG1_PEA (Q9ZP40) Plastoglobulin 1, chloroplast precursor| Length = 358 Score = 48.5 bits (114), Expect = 2e-05 Identities = 58/201 (28%), Positives = 83/201 (41%), Gaps = 56/201 (27%) Frame = -1 Query: 672 GAEATPEDKDRVDQIAQRLEEVSPTKEPLKS-ELLNGKWELLYTTSTSILQ--PQRPKFL 502 G A E + V + +LE +PT P++ +LLNG W LLYT S+ +L L Sbjct: 149 GFRARSEVRAEVSEFVAQLEAANPTPAPVEEPDLLNGNWVLLYTASSELLPLLAAGSLPL 208 Query: 501 RPYGTIYQAINTDTLRAQNMETL--PYFN---QVTANLVPLNSRKVAVRF---------- 367 I Q I+TD+ N TL P+ + V+A+ + ++ V F Sbjct: 209 LKLDKISQTIDTDSFTVVNSTTLSSPFASFSFSVSASFEVRSPTRIQVTFKEGSLQPPEI 268 Query: 366 -------DYFKIFS-------LIQIKAP-----------GSGKGELEI------------ 298 + IF L+Q P SG+ L+I Sbjct: 269 KSKIDLPENINIFGQQLSLGPLLQSLGPLENVVANISRVISGQSPLKIPIPGERTSSWLI 328 Query: 297 -TYLDEELRVSRGDKGNLFVL 238 TYLD++LR+SRGD G LFVL Sbjct: 329 TTYLDKDLRISRGD-GGLFVL 348
>PAP2_ORYSA (Q6K439) Probable plastid-lipid-associated protein 2, chloroplast| precursor (Fibrillin-like protein 2) Length = 319 Score = 47.4 bits (111), Expect = 4e-05 Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 60/207 (28%) Frame = -1 Query: 678 DRGAEATPEDKDRVDQIAQRLEEVSPTKEPLKS-ELLNGKWELLYTTSTSIL----QPQR 514 +RG A+ E + V ++ +LE +PT P ++ LLNGKW L YT+ + + Sbjct: 107 ERGLRASSETRAEVVELITQLEARNPTPAPTEALTLLNGKWILAYTSFSQLFPLLGSGSL 166 Query: 513 PKFLRPYGTIYQAINTDTLRAQNMETLPYFNQVTANLVPLNS-------RKVAVRFD--- 364 P+ ++ I Q I+++ QN + + + V N+ ++V ++FD Sbjct: 167 PQLVK-VEEISQTIDSENFTVQN--CIKFSGPLATTSVSTNAKFEVRSPKRVQIKFDEGI 223 Query: 363 ---------------------------YFKIFSLIQIKAPG-----SGKGELEI------ 298 IFS I+ A SG+ L+I Sbjct: 224 IGTPQLTDSIVLPEKFELFGQNIDLTPLKGIFSSIENAASSVARTISGQPPLKIPIRTDN 283 Query: 297 -------TYLDEELRVSRGDKGNLFVL 238 TYLD+ELR+SRGD ++FVL Sbjct: 284 AESWLLTTYLDDELRISRGDGSSIFVL 310
>CHRC_CUCSA (Q96398) Chromoplast-specific carotenoid-associated protein,| chloroplast precursor Length = 322 Score = 46.6 bits (109), Expect = 7e-05 Identities = 50/204 (24%), Positives = 81/204 (39%), Gaps = 57/204 (27%) Frame = -1 Query: 678 DRGAEATPEDKDRVDQIAQRLEEVSPTKEPLKS-ELLNGKWELLYTTSTSILQ-PQRPKF 505 DRG + + + + ++ +LE +PT P ++ LLNGKW L YTT + R Sbjct: 111 DRGLRVSRDTRAEIVELITQLESKNPTPAPTEALTLLNGKWILAYTTFAGLFPLLSRNLP 170 Query: 504 LRPYGTIYQAINTDTLRAQNMETLPYFNQVTANLVPLNSR-------KVAVRFD------ 364 L I Q I+++ L QN ++ + + + N++ +V ++F+ Sbjct: 171 LVKVEEISQTIDSENLTVQN--SVQFSGPLATTSITTNAKFEVRSPLRVHIKFEEGVIGT 228 Query: 363 ------------------------YFKIFSLIQIKAPGSGK------------------G 310 + I S +Q A K Sbjct: 229 PQLTDSIVIPDNVDFLGQKIDFTPFNGIISSLQDTASNVAKTISSQPPIKFSISNTRVES 288 Query: 309 ELEITYLDEELRVSRGDKGNLFVL 238 L TYLDE+LR+SRGD G++FVL Sbjct: 289 WLLTTYLDEDLRISRGDGGSVFVL 312
>PAP_CITUN (Q9ZWQ8) Plastid-lipid associated protein, chloroplast precursor| (CitPAP) Length = 323 Score = 46.6 bits (109), Expect = 7e-05 Identities = 63/211 (29%), Positives = 86/211 (40%), Gaps = 58/211 (27%) Frame = -1 Query: 678 DRGAEATPEDKDRVDQIAQRLEEVSPTKEPLKS-ELLNGKWELLYTTSTSILQPQRPKFL 502 DRG AT E + + ++ +LE +PT P ++ LLN KW L+Y TS S L P + Sbjct: 111 DRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVY-TSFSGLFPLLSRGT 169 Query: 501 RPYG---TIYQAINTDTLRAQN------------METLPYFN------------------ 421 P I Q I+++ QN + T F Sbjct: 170 LPLARVEEISQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGT 229 Query: 420 -QVTANLV-PLNSRKVAVRFDY--FK-IFSLIQIKAPGSGK------------------G 310 QVT +LV P N + + D FK I S +Q A K Sbjct: 230 PQVTDSLVLPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQS 289 Query: 309 ELEITYLDEELRVSRGDKGNLFV-LKMVDPL 220 L TYLDE+LR+SR D G++FV +K PL Sbjct: 290 WLLTTYLDEDLRISRADAGSVFVFIKEGSPL 320
>PAP3_ARATH (O82291) Probable plastid-lipid associated protein 3, chloroplast| precursor (AtPap3) (Fibrillin 3) Length = 376 Score = 45.1 bits (105), Expect = 2e-04 Identities = 56/201 (27%), Positives = 85/201 (42%), Gaps = 56/201 (27%) Frame = -1 Query: 672 GAEATPEDKDRVDQIAQRLEEVSPTKEPLKS-ELLNGKWELLYTTSTSI--LQPQRPKFL 502 G +A E + V ++ +LE ++PT PL++ ELL+G W LLYT + + L L Sbjct: 167 GFKAGSEVRAEVLELVNQLEALNPTPAPLENPELLDGNWVLLYTAFSELIPLLAAGSTPL 226 Query: 501 RPYGTIYQAINTDTLRAQNMETL--PYFN---QVTANLVPLNSRKVAVRFD--------- 364 +I Q+I+T+ L N TL P+ + TA+ + ++ V F Sbjct: 227 LKVKSISQSIDTNNLIIDNSTTLSSPFADFSFSATASFEVRSPSRIEVSFKEGTLKPPVI 286 Query: 363 ------------YFKIFSLIQIKA--------------------------PGS-GKGELE 301 + + SL +K PG+ G L Sbjct: 287 KSSVDLPESVGVFGQQISLSLLKQSLNPLQDVAANISRALSGQPPLKLPFPGNRGSSWLL 346 Query: 300 ITYLDEELRVSRGDKGNLFVL 238 TYLD++LR+SRGD G LFVL Sbjct: 347 TTYLDKDLRISRGD-GGLFVL 366
>PAP3_ORYSA (Q7XBW5) Probable plastid-lipid associated protein 3, chloroplast| precursor Length = 374 Score = 44.3 bits (103), Expect = 4e-04 Identities = 53/212 (25%), Positives = 86/212 (40%), Gaps = 59/212 (27%) Frame = -1 Query: 678 DRGAEATPEDKDRVDQIAQRLEEVSPTKEPLK-SELLNGKWELLYTTSTSILQ----PQR 514 D G A+ E + V ++ +LE +PT EP++ + LL G W L+YT + +L Sbjct: 161 DLGFRASSEVRGEVLELVTQLEATNPTPEPVQATHLLAGNWILIYTAYSELLPILAVGAA 220 Query: 513 PKFLRPYGTIYQAINTDTLRAQNMETL--PYFN---QVTANLVPLNSRKVAVRFDYF--- 358 P F I Q I+T+++ N T+ P+ + TA+ + ++ V+F Sbjct: 221 PLF--KVDEISQEIDTNSMTIVNASTISSPFASFSFSATASFDVQSPSRIEVQFKEGSFQ 278 Query: 357 --KIFSLIQIKA------------------------------------------PGSGKG 310 KI S + + A PG+ + Sbjct: 279 PPKISSSVDLPAEVDIFGQKISLGPVQQVLNPLQQAFASIAGSISGQPPLKLPIPGNNRA 338 Query: 309 E--LEITYLDEELRVSRGDKGNLFVLKMVDPL 220 L TYLD++LR+SRGD G ++K PL Sbjct: 339 RSWLLTTYLDKDLRISRGDGGLFILVKEGSPL 370
>LIPC_SOLTU (P80471) Light-induced protein, chloroplast precursor| (Chloroplastic drought-induced stress protein CDSP-34) Length = 326 Score = 43.9 bits (102), Expect = 5e-04 Identities = 53/203 (26%), Positives = 83/203 (40%), Gaps = 56/203 (27%) Frame = -1 Query: 678 DRGAEATPEDKDRVDQIAQRLEEVSPTKEPLKS-ELLNGKWELLYTTSTSI--LQPQRPK 508 +RG A+ E + + ++ +LE +P P ++ LLNGKW L YT+ + + L + Sbjct: 114 NRGLSASSETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSFSGLFPLLSRGNL 173 Query: 507 FLRPYGTIYQAINTDTLRAQN------------METLPYFN------------------- 421 L I Q I++++ QN + T F Sbjct: 174 PLVRVEEISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTP 233 Query: 420 QVTANLV-PLNSRKVAVRFDYFKIFSLIQ------------------IKAP---GSGKGE 307 Q+T ++V P N + + D LI IK P + + Sbjct: 234 QLTDSIVLPENVEFLGQKIDLSPFKGLITSVQDTASSVAKSISSQPPIKFPITNNNAQSW 293 Query: 306 LEITYLDEELRVSRGDKGNLFVL 238 L TYLD+ELR+SRGD G++FVL Sbjct: 294 LLTTYLDDELRISRGDAGSVFVL 316
>PAP2_ARATH (O49629) Probable plastid-lipid associated protein 2, chloroplast| precursor (AtPap2) (Fibrillin 2) Length = 310 Score = 43.5 bits (101), Expect = 6e-04 Identities = 47/203 (23%), Positives = 78/203 (38%), Gaps = 56/203 (27%) Frame = -1 Query: 678 DRGAEATPEDKDRVDQIAQRLEEVSPTKEPLKSE-LLNGKWELLYTT------------- 541 DRG A+ E + + + +LE +PT P ++ LLNGKW L YT+ Sbjct: 98 DRGLSASSETRAEIGDLITQLESKNPTPAPTEALFLLNGKWILAYTSFVNLFPLLSRGIV 157 Query: 540 -------------STSILQPQRPKFLRPYGTIYQAINTD-------------------TL 457 S + +F P GT + N T Sbjct: 158 PLIKVDEISQTIDSDNFTVQNSVRFAGPLGTNSISTNAKFEIRSPKRVQIKFEQGVIGTP 217 Query: 456 RAQNMETLPYFNQVTANLVPLNSRK---VAVRFDYFKIFSLIQIKAP-------GSGKGE 307 + + +P + +V + LN + +V+ + I + P + + Sbjct: 218 QLTDSIEIPEYVEVLGQKIDLNPIRGLLTSVQDTASSVARTISSQPPLKFSLPADNAQSW 277 Query: 306 LEITYLDEELRVSRGDKGNLFVL 238 L TYLD+++R+SRGD G++FVL Sbjct: 278 LLTTYLDKDIRISRGDGGSVFVL 300
>PAP2_BRACM (Q94KU6) Plastid lipid-associated protein 2, chloroplast precursor| Length = 319 Score = 42.7 bits (99), Expect = 0.001 Identities = 51/206 (24%), Positives = 77/206 (37%), Gaps = 59/206 (28%) Frame = -1 Query: 678 DRGAEATPEDKDRVDQIAQRLEEVSPTKEPLKSE-LLNGKWELLY--------------- 547 DRG A+ E + + + +LE +PT P + LLNGKW L Y Sbjct: 107 DRGLSASSETRAEIGDLITQLESKNPTPAPTDALFLLNGKWILAYTSFVGLFPLLSRGIV 166 Query: 546 ------------------------------TTSTS------ILQPQRPKFLRPYGTIYQA 475 TTS S I P+R + G I Sbjct: 167 PLVKVDEISQTIDSDNFTVENSVLFAGPLATTSISTNAKFEIRSPKRVQIKFEEGVIGTP 226 Query: 474 INTDTLRAQNMETLPYFNQVTANLVPLNSRKVAVRFDYFKIFSLIQIKAP-------GSG 316 TD++ E + + Q +L P+ +V+ + I + P S Sbjct: 227 QLTDSIEIP--EYVEFLGQ-KIDLTPIRGLLTSVQDTATSVARTISSQPPLKFSLPGDSA 283 Query: 315 KGELEITYLDEELRVSRGDKGNLFVL 238 + L TYLD+++R+SRGD G++FVL Sbjct: 284 QSWLLTTYLDKDIRISRGDGGSVFVL 309
>LIPC_SOLDE (O99019) Light-induced protein, chloroplast precursor (C40.4)| Length = 326 Score = 42.0 bits (97), Expect = 0.002 Identities = 52/203 (25%), Positives = 82/203 (40%), Gaps = 56/203 (27%) Frame = -1 Query: 678 DRGAEATPEDKDRVDQIAQRLEEVSPTKEPLKS-ELLNGKWELLYTTSTSI--LQPQRPK 508 +RG A+ E + + ++ +LE +P P ++ LLNGKW L YT+ + + L + Sbjct: 114 NRGLSASSETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSFSGLFPLLSRGNL 173 Query: 507 FLRPYGTIYQAINTDTLRAQN------------METLPYFN------------------- 421 L I Q I++++ QN + T F Sbjct: 174 PLVRVEEISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTP 233 Query: 420 QVTANLV-PLNSRKVAVRFDYFKIFSLIQ------------------IKAP---GSGKGE 307 Q+T ++V P N + + D LI IK P + + Sbjct: 234 QLTDSIVLPENVEFLGQKIDVSPFKGLITSVQDTASSVVKSISSQPPIKFPITNNNAQSW 293 Query: 306 LEITYLDEELRVSRGDKGNLFVL 238 L TYLD+ELR+ RGD G++FVL Sbjct: 294 LLTTYLDDELRIPRGDAGSVFVL 316
>PAP1_ARATH (O81439) Probable plastid-lipid associated protein 1, chloroplast| precursor (AtPap1) (Fibrillin 1) Length = 318 Score = 41.6 bits (96), Expect = 0.002 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 3/81 (3%) Frame = -1 Query: 678 DRGAEATPEDKDRVDQIAQRLEEVSPTKEPLKS-ELLNGKWELLYTTSTSI--LQPQRPK 508 DRG + + + + ++ +LE +PT P ++ LLNGKW L YT+ + L +R + Sbjct: 106 DRGLSVSSDTRAEISELITQLESKNPTPAPNEALFLLNGKWILAYTSFVGLFPLLSRRIE 165 Query: 507 FLRPYGTIYQAINTDTLRAQN 445 L I Q I++D+ QN Sbjct: 166 PLVKVDEISQTIDSDSFTVQN 186
>PAP3_BRACM (Q94KU5) Plastid lipid-associated protein 3, chloroplast precursor| Length = 360 Score = 41.6 bits (96), Expect = 0.002 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 3/83 (3%) Frame = -1 Query: 672 GAEATPEDKDRVDQIAQRLEEVSPTKEPLKS-ELLNGKWELLYTTSTSILQ--PQRPKFL 502 G A E + V +I +LE ++PT+ P+++ ELL+G W LLYT + +L L Sbjct: 151 GFRAGSEVRAEVLEIVNQLEALNPTQAPVENPELLDGNWVLLYTAFSELLPLLAAGSTPL 210 Query: 501 RPYGTIYQAINTDTLRAQNMETL 433 +I Q+I+T +L N TL Sbjct: 211 LKVKSISQSIDTKSLSIDNSTTL 233 Score = 34.3 bits (77), Expect = 0.37 Identities = 19/36 (52%), Positives = 26/36 (72%), Gaps = 1/36 (2%) Frame = -1 Query: 342 IQIKAPGS-GKGELEITYLDEELRVSRGDKGNLFVL 238 +++ PG+ G L TYLD++LR+SRGD G LFVL Sbjct: 316 LKLPFPGNRGSSWLLTTYLDKDLRISRGD-GGLFVL 350
>P32_MYCGE (Q49417) P32 adhesin (Cytadhesin P32)| Length = 280 Score = 35.8 bits (81), Expect = 0.13 Identities = 24/89 (26%), Positives = 43/89 (48%) Frame = -1 Query: 654 EDKDRVDQIAQRLEEVSPTKEPLKSELLNGKWELLYTTSTSILQPQRPKFLRPYGTIYQA 475 E+K+R +QIA++L+ +S +E E ++ + + + QP +P+F + + A Sbjct: 104 EEKERQEQIAEQLQRISDQQEQQTVE-IDPQQSQAQPSQPQVQQPLQPQFQQRVPLLRPA 162 Query: 474 INTDTLRAQNMETLPYFNQVTANLVPLNS 388 N NM+ P FNQ P N+ Sbjct: 163 FN------PNMQQRPGFNQPNQQFQPHNN 185
>MOAA_CLOAB (Q97HL8) Molybdenum cofactor biosynthesis protein A| Length = 318 Score = 30.4 bits (67), Expect = 5.4 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = -1 Query: 543 TSTSILQPQRPKFLRPYGTIYQAINTDTLRAQNMETLPYFNQVT 412 T+ IL PQ K L+ G I+ DTL++ + FNQ+T Sbjct: 93 TTNGILLPQMAKDLKKAGLKRVNISLDTLKSDTFTKITNFNQIT 136
>TRMB_SCHPO (Q96WV1) Probable tRNA (guanine-N(7)-)-methyltransferase (EC| 2.1.1.33) (tRNA(m7G46)-methyltransferase) Length = 273 Score = 30.0 bits (66), Expect = 7.0 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 3/45 (6%) Frame = -1 Query: 537 TSILQPQRPKFLRPYGTIYQAINTDTLR---AQNMETLPYFNQVT 412 TS L + F+RP+GT+Y + + L AQ+++ P F + T Sbjct: 187 TSTLASEYAYFIRPHGTLYTITDVEELHVWMAQHLDAHPLFRRFT 231
>PROA_LEPIN (P94872) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 416 Score = 30.0 bits (66), Expect = 7.0 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Frame = -1 Query: 363 YFKIFSLIQIKAPGSGKGELEITYLDEELRVSRGDKG--NLFVLKMVDPLYRVPL 205 +F+ SLI I P G+G + + ++ V + DKG NL++ + DP +P+ Sbjct: 192 FFQQTSLIDIVVPRGGEGLIRFVSENSKIPVVKHDKGVCNLYIDQDADPEKVIPI 246
>PROA_LEPIC (Q72NQ9) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 416 Score = 30.0 bits (66), Expect = 7.0 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Frame = -1 Query: 363 YFKIFSLIQIKAPGSGKGELEITYLDEELRVSRGDKG--NLFVLKMVDPLYRVPL 205 +F+ SLI I P G+G + + ++ V + DKG NL++ + DP +P+ Sbjct: 192 FFQQTSLIDIVVPRGGEGLIRFVSENSKIPVVKHDKGVCNLYIDQDADPEKVIPI 246
>JUN_PIG (P56432) Transcription factor AP-1 (Activator protein 1) (AP1)| (Proto-oncogene c-jun) (V-jun avian sarcoma virus 17 oncogene homolog) Length = 331 Score = 29.6 bits (65), Expect = 9.1 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 7/57 (12%) Frame = -3 Query: 622 AAGGGEPDQGAAQVRAP------QRQVGAPLHHLHFHSPATEA-KVSEAIRDDLPGD 473 ++GGG P GAA + P Q+Q P HHL P +A K ++PG+ Sbjct: 182 SSGGGAPSYGAAGLAFPAQPQQQQQQPPQPPHHLPVQHPRLQALKEEPQTVPEMPGE 238
>CUL1_SCHPO (O13790) Cullin-1 (Cul-1) (Cell division control 53 homolog)| Length = 767 Score = 29.6 bits (65), Expect = 9.1 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Frame = -1 Query: 585 KSELLNGKWELLYTTSTSILQP-QRPKFLRPYGTIYQAINTDTLRAQNMETLPYFNQVTA 409 K + LNG W+ L T + I + + Y +Y AI+ A T+ FN TA Sbjct: 16 KYDSLNGTWDFLKTGVSQIFERLDEGMTITKYMELYTAIHNYCADASKTITVDNFNDQTA 75 Query: 408 NLV 400 N++ Sbjct: 76 NVL 78 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,567,424 Number of Sequences: 219361 Number of extensions: 1996305 Number of successful extensions: 5270 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 5075 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5261 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6912958834 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
