>IDI2_LISMO (Q8Y7A5) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP|
           isomerase) (Isopentenyl pyrophosphate isomerase)
          Length = 358

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 17/74 (22%), Positives = 36/74 (48%)
 Frame = +1

Query: 91  FIALHTRQHTHTYTDNSELTYMYRSLAVPLAILSDTPKKLDAQVSAMESTVSAISPGLIV 270
           +I   T    HT   N+EL  + R +A+P+A+ S +    ++ +    + V  I+P  ++
Sbjct: 66  YINAMTGGSRHTKKINAELAEIAREVAIPMAVGSQSAALKNSSLIDTYNIVREINPNGMI 125

Query: 271 IESENHETAFSPAI 312
           + + + E A    +
Sbjct: 126 LANVSPEVAIQDGL 139

>CISY_ASPNG (P51044) Citrate synthase, mitochondrial precursor (EC 2.3.3.1)|
          Length = 475

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +1

Query: 160 RSLAVPLAILSDTPKKLDAQVSAMESTVSAISPGLIVIESENHETAFSPA 309
           R L+   A  SD PK ++  +    ST+  +S   + + +  HE+AF+ A
Sbjct: 144 RDLSAEWAARSDLPKFIEELIDRCPSTLHPMSQFSLAVTALEHESAFAKA 193

>CISY_EMENI (O00098) Citrate synthase, mitochondrial precursor (EC 2.3.3.1)|
          Length = 474

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 14/50 (28%), Positives = 27/50 (54%)
 Frame = +1

Query: 160 RSLAVPLAILSDTPKKLDAQVSAMESTVSAISPGLIVIESENHETAFSPA 309
           R L+   A  SD PK ++  +  + ST+  ++   + + +  HE+AF+ A
Sbjct: 144 RDLSAEWAARSDLPKFIEELIDRVPSTLHPMAQFSLAVTALEHESAFAKA 193

>VGLB_RHCM6 (P89053) Glycoprotein B precursor|
          Length = 854

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -3

Query: 245 ETVDSIADTCASSFLGVSERIARGTARDLYMYVSSELS 132
           + V+   +TC  +F   SER  R  A D Y Y SS ++
Sbjct: 308 DIVEEANNTCEYTFWEQSERTIRSEADDTYHYTSSSMT 345

>IDI2_LISMF (Q71ZT7) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP|
           isomerase) (Isopentenyl pyrophosphate isomerase)
          Length = 358

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 17/74 (22%), Positives = 35/74 (47%)
 Frame = +1

Query: 91  FIALHTRQHTHTYTDNSELTYMYRSLAVPLAILSDTPKKLDAQVSAMESTVSAISPGLIV 270
           +I   T    HT   N+EL  + R +A+P+A+ S +    ++ +      V  I+P  ++
Sbjct: 66  YINAMTGGSRHTKKINAELAEIAREVAIPMAVGSQSAALKNSSLIDTYKIVREINPNGMI 125

Query: 271 IESENHETAFSPAI 312
           + + + E A    +
Sbjct: 126 LANISPEVALQEGL 139

>IDI2_LISIN (Q92BX2) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP|
           isomerase) (Isopentenyl pyrophosphate isomerase)
          Length = 358

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 18/80 (22%), Positives = 37/80 (46%)
 Frame = +1

Query: 73  TLSYFRFIALHTRQHTHTYTDNSELTYMYRSLAVPLAILSDTPKKLDAQVSAMESTVSAI 252
           T+ +  +I   T    HT   N+EL  + R +A+P+A+ S +    ++ +      V  +
Sbjct: 60  TVPFPFYINAMTGGSRHTKRINAELAEIAREVAIPMAVGSQSAALKNSSLIDTYQVVREV 119

Query: 253 SPGLIVIESENHETAFSPAI 312
           +P  I++ + + E      I
Sbjct: 120 NPKGIILANVSPEVDIQDGI 139

>Y213_MYCPN (P75556) Hypothetical protein MG075 homolog (G07_orf1030)|
          Length = 1030

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = -3

Query: 302 EKAVS*FSLSITIKPGEMAETVDSIADTCASSFLGVSERIAR-GTARDLYMYVSSELS 132
           +K    F    T+K GE  ET DS+  T   S LG  E++A  G   D Y++ +  L+
Sbjct: 492 DKIAELFLTKRTVKNGEKIETKDSLLVTSLKSLLG--EKVAALGDLLDSYIFKNELLN 547

>PURL_LEPIN (Q8F6I3) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)|
           (FGAM synthase II)
          Length = 745

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
 Frame = +1

Query: 157 YRSLAVPLAILSDTPKKLDAQVSAMESTVSAISPGLIV---IESENHETAFSP 306
           Y++  + L  L  T  KL A+     +    I  GL V   IES NH TA  P
Sbjct: 50  YKNSILKLKTLPTTSDKLLAKAGEENAGAMDIGDGLAVVFKIESHNHPTAVEP 102

>PURL_LEPIC (Q72PR5) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)|
           (FGAM synthase II)
          Length = 745

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
 Frame = +1

Query: 157 YRSLAVPLAILSDTPKKLDAQVSAMESTVSAISPGLIV---IESENHETAFSP 306
           Y++  + L  L  T  KL A+     +    I  GL V   IES NH TA  P
Sbjct: 50  YKNSILKLKTLPTTSDKLLAKAGEENAGAMDIGDGLAVVFKIESHNHPTAVEP 102

>MED21_HUMAN (Q13503) Mediator of RNA polymerase II transcription subunit 21|
           (RNA polymerase II holoenzyme component SRB7) (RNAPII
           complex component SRB7)
          Length = 144

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
 Frame = +1

Query: 181 AILSDTPKKLDAQVSAM---ESTVSAISPGLIVIESENHETA 297
           A+++ T K +D  + ++   EST +  +  L  +E ENHE A
Sbjct: 60  ALIARTAKDIDVLIDSLPSEESTAALQAASLYKLEEENHEAA 101

>CWC25_KLULA (Q6CUQ5) Pre-mRNA-splicing factor CWC25|
          Length = 206

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 238 WTPSLIPARPVFWECQKELQEAQQEI 161
           W P L+  R   WE Q++L E  ++I
Sbjct: 10  WNPKLVKNRKKVWEAQQQLVEENKKI 35


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,815,920
Number of Sequences: 219361
Number of extensions: 621179
Number of successful extensions: 1435
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1431
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 1386249648
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)