>gb|AC147962.1| Oryza sativa chromosome 3 BAC OSJNBa0083K01 genomic sequence, complete
             sequence
          Length = 167239

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                           
Query: 51    ggcggataatctgnatttaattaccctttcatatttccggttcatc 96
             ||||||||||||| |||||||||||||| ||||| || ||||||||
Sbjct: 78296 ggcggataatctgtatttaattacccttccatatctcaggttcatc 78341

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                              
Query: 51       ggcggataatctgnatttaattaccctttcatatttccggttcatc 96
                ||||||||||||| |||||||||||||| ||||| || ||||||||
Sbjct: 21006982 ggcggataatctgtatttaattacccttccatatctcaggttcatc 21006937

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                              
Query: 51       ggcggataatctgnatttaattaccctttcatatttccggttcatc 96
                ||||||||||||| |||||||||||||| ||||| || ||||||||
Sbjct: 22435333 ggcggataatctgtatttaattacccttccatatctcaggttcatc 22435378

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                              
Query: 51       ggcggataatctgnatttaattaccctttcatatttccggttcatc 96
                ||||||||||||| |||||||||||||| ||||| || ||||||||
Sbjct: 21000011 ggcggataatctgtatttaattacccttccatatctcaggttcatc 20999966

>dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0406F06
          Length = 144533

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                           
Query: 51    ggcggataatctgnatttaattaccctttcatatttccggttcatc 96
             ||||||||||||| |||||||||||||| ||||| || ||||||||
Sbjct: 96400 ggcggataatctgtatttaattacccttccatatctcaggttcatc 96445

>dbj|AK120271.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047M22, full
            insert sequence
          Length = 3296

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 51   ggcggataatctgnatttaattaccctttcatatttccggttcatc 96
            ||||||||||||| |||||||||||||| ||||| || ||||||||
Sbjct: 3217 ggcggataatctgtatttaattacccttccatatctcaggttcatc 3172

>dbj|AK104858.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-D03, full
            insert sequence
          Length = 1552

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 51   ggcggataatctgnatttaattaccctttcatatttccggttcatc 96
            ||||||||||||| |||||||||||||| ||||| || ||||||||
Sbjct: 1468 ggcggataatctgtatttaattacccttccatatctcaggttcatc 1423

>dbj|AK068466.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155K02, full
            insert sequence
          Length = 4236

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 51   ggcggataatctgnatttaattaccctttcatatttccggttcatc 96
            ||||||||||||| |||||||||||||| ||||| || ||||||||
Sbjct: 4150 ggcggataatctgtatttaattacccttccatatctcaggttcatc 4105

>gb|AY374513.1| Oryza sativa (japonica cultivar-group) myosin heavy chain class VIII
            A1 protein (MyoVIIIA1) mRNA, complete cds
          Length = 4864

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 51   ggcggataatctgnatttaattaccctttcatat 84
            ||||||||||||| |||||||||||||| |||||
Sbjct: 4753 ggcggataatctgtatttaattacccttccatat 4720

>gb|AC122034.3| Mus musculus BAC clone RP24-403M18 from chromosome 15, complete sequence
          Length = 182891

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 296    ccttctctcctgccatctgtt 316
              |||||||||||||||||||||
Sbjct: 151601 ccttctctcctgccatctgtt 151581

>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 234     gtccaccgtctccgccatct 253
               ||||||||||||||||||||
Sbjct: 3739002 gtccaccgtctccgccatct 3738983

>ref|NM_004588.3| Homo sapiens sodium channel, voltage-gated, type II, beta (SCN2B),
            mRNA
          Length = 4939

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 163  tctcttgctgtgcctcttgc 182
            ||||||||||||||||||||
Sbjct: 4480 tctcttgctgtgcctcttgc 4499

>emb|CR860366.1| Pongo pygmaeus mRNA; cDNA DKFZp459O0412 (from clone DKFZp459O0412)
          Length = 1757

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 163  tctcttgctgtgcctcttgc 182
            ||||||||||||||||||||
Sbjct: 1314 tctcttgctgtgcctcttgc 1333

>dbj|AB089137.1| Gorilla gorilla gene for CMP-N-acetylneuraminic acid hydroxylase,
            partial cds, Alu repeat region
          Length = 8299

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 188  tttctgacactcccaaaaaa 207
            ||||||||||||||||||||
Sbjct: 6821 tttctgacactcccaaaaaa 6840

>emb|CR625871.1| full-length cDNA clone CS0DC001YL16 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 918

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 163 tctcttgctgtgcctcttgc 182
           ||||||||||||||||||||
Sbjct: 504 tctcttgctgtgcctcttgc 523

>dbj|AK094643.1| Homo sapiens cDNA FLJ37324 fis, clone BRAMY2018279
          Length = 2844

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 163  tctcttgctgtgcctcttgc 182
            ||||||||||||||||||||
Sbjct: 2403 tctcttgctgtgcctcttgc 2422

>dbj|AK090729.1| Homo sapiens cDNA FLJ33410 fis, clone BRACE2012653
          Length = 2007

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 163  tctcttgctgtgcctcttgc 182
            ||||||||||||||||||||
Sbjct: 1572 tctcttgctgtgcctcttgc 1591

>dbj|AP002800.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-832A4, complete
             sequence
          Length = 215441

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 163   tctcttgctgtgcctcttgc 182
             ||||||||||||||||||||
Sbjct: 85845 tctcttgctgtgcctcttgc 85826

>emb|Z83744.1|CEC06A12 Caenorhabditis elegans Cosmid C06A12, complete sequence
          Length = 39774

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 198   tcccaaaaaactggacgcgc 217
             ||||||||||||||||||||
Sbjct: 18216 tcccaaaaaactggacgcgc 18235


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,014,696
Number of Sequences: 3902068
Number of extensions: 2014696
Number of successful extensions: 37944
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 37892
Number of HSP's gapped (non-prelim): 52
length of query: 388
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 366
effective length of database: 17,147,199,772
effective search space: 6275875116552
effective search space used: 6275875116552
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)