ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal7o12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YEE9_SCHPO (O13825) Hypothetical protein C19A8.09 in chromosome I 42 3e-04
2YOS1_YEAST (Q3E834) Protein YOS1 (YIP one suppressor protein 1) 33 0.13
3NAS25_CAEEL (Q20459) Zinc metalloproteinase nas-25 precursor (EC... 27 9.6

>YEE9_SCHPO (O13825) Hypothetical protein C19A8.09 in chromosome I|
          Length = 81

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
 Frame = -1

Query: 344 EDRFLGPRGWSMSEVSGNGQTK-SXKGQIVGLIYATQ-FLRMPLIALNVLIIVVKMV 180
           EDRFLG  GWS S   G G  + + K +I+ LI A +  +  PLIA+N ++IV  +V
Sbjct: 23  EDRFLGRIGWSQSAALGFGDRQDTIKSRILHLIRAIRTVMTFPLIAINTIVIVYNLV 79



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>YOS1_YEAST (Q3E834) Protein YOS1 (YIP one suppressor protein 1)|
          Length = 85

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
 Frame = -1

Query: 344 EDRFLGPRGWSMSE----VSGNGQTKSXKGQIVGLIYATQ-FLRMPLIALNVLIIVVKMV 180
           E+RFL   G   S     V G  Q  + K ++V LI A Q  LR+PLI +N+L+IV +++
Sbjct: 25  EERFLRRIGLGRSNDETPVFGQDQN-TTKSKVVQLIGAVQTLLRIPLIGINILVIVYELL 83



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>NAS25_CAEEL (Q20459) Zinc metalloproteinase nas-25 precursor (EC 3.4.24.21)|
           (Nematode astacin 25)
          Length = 399

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 10/39 (25%), Positives = 23/39 (58%)
 Frame = -3

Query: 279 VVXGADRGAHLCHSVSADALDSA*CSYHCCENGVXLRLL 163
           +V  +DR   + + +++D++    CS+ C E G+ ++ L
Sbjct: 315 IVGPSDRTLQVIYEITSDSIRRQICSFGCYEGGIEVKHL 353


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,870,558
Number of Sequences: 219361
Number of extensions: 617841
Number of successful extensions: 1309
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1308
length of database: 80,573,946
effective HSP length: 90
effective length of database: 60,831,456
effective search space used: 1459954944
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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