>HMCN1_HUMAN (Q96RW7) Hemicentin-1 precursor (Fibulin-6) (FIBL-6)|
          Length = 5635

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 6/37 (16%)
 Frame = -3

Query: 467  WPTALGWS------GRGMRERTTGFRSPTPWLGRRPC 375
            W T   WS      G G R+RT G   P P  G R C
Sbjct: 4703 WATWASWSACSVSCGGGARQRTRGCSDPVPQYGGRKC 4739

>GPC3_RAT (P13265) Glypican-3 precursor (Intestinal protein OCI-5)|
          Length = 597

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 15/51 (29%), Positives = 20/51 (39%)
 Frame = +3

Query: 132 KNNRVLDNKSIKEQPWKPXXXXXXXXXXXWCYGSRGTHAPCSYSCCPNARC 284
           K+N +  + S+   P  P            C+ S  T  PC   CCP A C
Sbjct: 544 KDNEITTSHSVGNMP-SPLKILISVAIYVACFFSWCTDLPCPCLCCPAAPC 593

>LA_AEDAL (Q26457) La protein homolog (La ribonucleoprotein) (La autoantigen|
           homolog)
          Length = 383

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +3

Query: 351 RSPGGSLSTRPPSQPWRRRAKTG 419
           R+P G  ++RPP Q WRR+AK G
Sbjct: 359 RTPEGRQASRPP-QEWRRKAKGG 380

>LRP1_CHICK (P98157) Low-density lipoprotein receptor-related protein 1 precursor|
            (LRP) (Alpha-2-macroglobulin receptor) (A2MR)
          Length = 4543

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +3

Query: 222  CYGSRGTHAPCSYSCCPNARCRY*TW 299
            C G R    P +Y  CP+ RC   TW
Sbjct: 2682 CPGGRKPKCPANYFACPSGRCIPMTW 2707

>CO4_RAT (P08649) Complement C4 precursor [Contains: Complement C4 beta|
           chain; Complement C4 alpha chain; C4a anaphylatoxin;
           Complement C4 gamma chain]
          Length = 1737

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 16/55 (29%), Positives = 28/55 (50%)
 Frame = -2

Query: 336 ELEEITSWGFVDAMFNIDIEHLDNMNKSKEHGFLGFRNTINSFIAWIDKMKASKV 172
           E  E+TSW FV + F++D+ H      +K+H   G    + + +  +   +AS V
Sbjct: 351 EEAELTSWPFVSSAFSLDLSH------TKQHLVPGAPFLLQALVREMSGSEASDV 399

>Y434_BUCAP (Q8K9B4) Hypothetical UPF0056 protein BUsg434|
          Length = 196

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +1

Query: 181 SLHLIDPSDEGVDGVTEAEEPMLLAL 258
           ++ +I PSDEG +G +  EEP L+ L
Sbjct: 84  AIKMIFPSDEGNNGTSSEEEPFLVPL 109

>TFB2_ASHGO (Q75B51) RNA polymerase II transcription factor B subunit 2 (RNA|
           polymerase II transcription factor B p52 subunit) (RNA
           polymerase II transcription factor B 52 kDa subunit)
          Length = 514

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 14/48 (29%), Positives = 27/48 (56%)
 Frame = -2

Query: 231 FRNTINSFIAWIDKMKASKVVP*CSYCLVLYCSLQRMPPDPILSLIYQ 88
           F+NT+N ++  + +   S++    + CL +Y  L  M    I+S+I+Q
Sbjct: 15  FKNTVNEYLQELPQPVQSRLYQSPATCLAIYRLLSPMAKFFIMSMIFQ 62


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,899,278
Number of Sequences: 219361
Number of extensions: 1279776
Number of successful extensions: 3559
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3559
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)