>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  204 bits (518), Expect(2) = 1e-71
 Identities = 100/100 (100%), Positives = 100/100 (100%)
 Frame = -3

Query: 669 PGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYG 490
           PGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYG
Sbjct: 328 PGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYG 387

Query: 489 HMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 370
           HMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG
Sbjct: 388 HMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 427



 Score = 86.3 bits (212), Expect(2) = 1e-71
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = -2

Query: 322 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 209
           GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF
Sbjct: 427 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464

>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  163 bits (412), Expect(2) = 7e-54
 Identities = 79/100 (79%), Positives = 90/100 (90%)
 Frame = -3

Query: 669 PGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYG 490
           PGQSIDFFGALRARVYDDEVRK+V S G+E IGKRLVNSR+GP  FEQP+MT EKL+EYG
Sbjct: 338 PGQSIDFFGALRARVYDDEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYG 397

Query: 489 HMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 370
           +MLV EQ+NVKRVQLA+TY+SQAALGDAN DA+  G+FYG
Sbjct: 398 NMLVMEQENVKRVQLAETYLSQAALGDANADAIGRGTFYG 437



 Score = 67.8 bits (164), Expect(2) = 7e-54
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = -2

Query: 322 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 209
           GKGAQQ  LPVPEGCTD  A+N+DPTARSDDG+C+Y F
Sbjct: 437 GKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF 474

>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  164 bits (414), Expect(2) = 9e-54
 Identities = 77/100 (77%), Positives = 89/100 (89%)
 Frame = -3

Query: 669 PGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYG 490
           PGQSIDFFGALRARVY DEVRKWV   G++ IGK+LVNS++GP +FEQPKMT++KLL YG
Sbjct: 338 PGQSIDFFGALRARVYHDEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYG 397

Query: 489 HMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 370
            MLVQEQ+NVKRVQLAD YMS+AALGDAN DA+K G+FYG
Sbjct: 398 GMLVQEQENVKRVQLADKYMSEAALGDANNDAIKRGTFYG 437



 Score = 66.6 bits (161), Expect(2) = 9e-54
 Identities = 30/40 (75%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
 Frame = -2

Query: 325 GGKGAQQ-GTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 209
           GG+ AQQ G +PVPEGCTD  A NYDPTARSDDGSC+Y F
Sbjct: 437 GGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVYKF 476

>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  165 bits (417), Expect(2) = 3e-53
 Identities = 76/100 (76%), Positives = 91/100 (91%)
 Frame = -3

Query: 669 PGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYG 490
           PGQSIDFFGALRARVY DEVRKWV S G++N+GK+LVNS+DGP  FEQP+MT++KL+EYG
Sbjct: 336 PGQSIDFFGALRARVYHDEVRKWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYG 395

Query: 489 HMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 370
           +MLVQEQ+NVKRVQLAD YMS AALGDAN+DA+  G+F+G
Sbjct: 396 NMLVQEQENVKRVQLADQYMSSAALGDANKDAIDRGTFFG 435



 Score = 63.9 bits (154), Expect(2) = 3e-53
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = -2

Query: 322 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLY 215
           GK AQQ +LPV +GCTD  AKNYDPTARSDDGSC Y
Sbjct: 435 GKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 470

>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  179 bits (455), Expect = 5e-45
 Identities = 84/100 (84%), Positives = 93/100 (93%)
 Frame = -3

Query: 669 PGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYG 490
           PGQSIDFFGALRARVYDDEVRKWVG  G+ENI KRLVNSR+GP TF+QPKMT+EKL+EYG
Sbjct: 325 PGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYG 384

Query: 489 HMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 370
           HMLVQEQ+NVKRVQLAD Y+S+AALG AN DAMKTG+FYG
Sbjct: 385 HMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYG 424

>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  179 bits (453), Expect = 9e-45
 Identities = 84/100 (84%), Positives = 94/100 (94%)
 Frame = -3

Query: 669 PGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYG 490
           PGQSIDFFGALRARVYDDEVRKWV  TG+ENIGKRLVNSR+GP  FEQPKMT+EKL+EYG
Sbjct: 328 PGQSIDFFGALRARVYDDEVRKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLIEYG 387

Query: 489 HMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 370
           +MLV+EQ+NVKRVQLA+ Y+S+AALGDAN DAMKTGSFYG
Sbjct: 388 YMLVKEQENVKRVQLAEQYLSEAALGDANSDAMKTGSFYG 427

>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  173 bits (438), Expect = 5e-43
 Identities = 80/100 (80%), Positives = 93/100 (93%)
 Frame = -3

Query: 669 PGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYG 490
           PGQSIDFFGALRARVYDDEVRKW+   G+++IGK+LVNS++GP TFEQPKMT+EKLLEYG
Sbjct: 338 PGQSIDFFGALRARVYDDEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYG 397

Query: 489 HMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 370
           +MLVQEQ+NVKRVQLAD Y+S+AALGDAN DAM TG+FYG
Sbjct: 398 NMLVQEQENVKRVQLADKYLSEAALGDANSDAMNTGTFYG 437

>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  171 bits (432), Expect = 2e-42
 Identities = 78/99 (78%), Positives = 93/99 (93%)
 Frame = -3

Query: 669 PGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYG 490
           PGQSIDFFGALRARVYDDEVR+WV  TG+ENI ++LVNS++GP TFEQPK+T+EKLLEYG
Sbjct: 334 PGQSIDFFGALRARVYDDEVRRWVSETGVENIARKLVNSKEGPPTFEQPKITIEKLLEYG 393

Query: 489 HMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 373
           HMLV EQ+NVKRVQLAD Y+++AALG+AN+DAMKTGSF+
Sbjct: 394 HMLVAEQENVKRVQLADKYLNEAALGEANEDAMKTGSFF 432

>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  166 bits (421), Expect = 5e-41
 Identities = 77/98 (78%), Positives = 91/98 (92%)
 Frame = -3

Query: 669 PGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYG 490
           PGQSIDFFGALRARVYDDEVRKWV   G++ IGK+LVNS++GP TFEQPKMT++KLL+YG
Sbjct: 338 PGQSIDFFGALRARVYDDEVRKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYG 397

Query: 489 HMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSF 376
           +MLV+EQ+NVKRVQLAD YMS+AALGDANQDA+K G+F
Sbjct: 398 NMLVEEQENVKRVQLADKYMSEAALGDANQDAIKRGTF 435

>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  165 bits (418), Expect = 1e-40
 Identities = 79/99 (79%), Positives = 88/99 (88%)
 Frame = -3

Query: 669 PGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYG 490
           PGQSIDFFGALRARVYDDEVRKWV  TGIE IG +L+NS DGP TFEQPKMT+EKLLEYG
Sbjct: 342 PGQSIDFFGALRARVYDDEVRKWVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYG 401

Query: 489 HMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 373
           +MLVQEQ+NVKRVQLAD Y+ +AALGDAN DA+  GSF+
Sbjct: 402 NMLVQEQENVKRVQLADKYLKEAALGDANADAINNGSFF 440

>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  165 bits (418), Expect = 1e-40
 Identities = 80/98 (81%), Positives = 89/98 (90%)
 Frame = -3

Query: 669 PGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYG 490
           PGQSIDFFGALRARVYDDEVRKWV  TGIE IG +L+NS DGP TFEQPKMTVEKLLEYG
Sbjct: 342 PGQSIDFFGALRARVYDDEVRKWVSGTGIEAIGDKLLNSFDGPPTFEQPKMTVEKLLEYG 401

Query: 489 HMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSF 376
           +MLVQEQ+NVKRVQLA+TY+ +AALGDAN DA+ TG+F
Sbjct: 402 NMLVQEQENVKRVQLAETYLKEAALGDANADAINTGNF 439

>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  165 bits (417), Expect = 1e-40
 Identities = 79/96 (82%), Positives = 89/96 (92%)
 Frame = -3

Query: 669 PGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYG 490
           PGQSIDFFGALRARVYDDEVRKWV  TGIE IG++L+NSRDGP TFEQPKMT+EKLLEYG
Sbjct: 337 PGQSIDFFGALRARVYDDEVRKWVSGTGIELIGEKLLNSRDGPPTFEQPKMTLEKLLEYG 396

Query: 489 HMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTG 382
           +MLVQEQ+NVKRVQLA+TY+ +AALGDAN DA+ TG
Sbjct: 397 NMLVQEQENVKRVQLAETYLKEAALGDANADAINTG 432

>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  159 bits (401), Expect = 9e-39
 Identities = 71/99 (71%), Positives = 92/99 (92%)
 Frame = -3

Query: 669 PGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYG 490
           PGQSIDFFGALRARVYDDEVRKW+   G++  GK+LVNS++GP TF+QPKM+++KLL+YG
Sbjct: 340 PGQSIDFFGALRARVYDDEVRKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYG 399

Query: 489 HMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 373
           +MLVQEQ+NVKRVQLAD Y+++AALG+AN+DA+K+GSF+
Sbjct: 400 NMLVQEQENVKRVQLADKYLNEAALGNANEDAIKSGSFF 438

>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  158 bits (399), Expect = 2e-38
 Identities = 71/99 (71%), Positives = 91/99 (91%)
 Frame = -3

Query: 669 PGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYG 490
           PGQSIDFFGALRARVYDDEVRKW+   G++++GK+LVNS++GP TF+QPKMT++KLL Y 
Sbjct: 342 PGQSIDFFGALRARVYDDEVRKWISGVGVDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYA 401

Query: 489 HMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 373
            MLVQEQ+NVKRVQLAD Y+++AALG+AN+DA+K+GSF+
Sbjct: 402 SMLVQEQENVKRVQLADQYLNEAALGNANEDAIKSGSFF 440

>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  123 bits (309), Expect = 4e-28
 Identities = 57/75 (76%), Positives = 66/75 (88%)
 Frame = -3

Query: 669 PGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYG 490
           PGQSIDFFGALRARVYDDEVRKW    G+E IG+ LVNS++ P TF+QPKMT+EKLLEYG
Sbjct: 335 PGQSIDFFGALRARVYDDEVRKWAVGVGVERIGRNLVNSKESPPTFDQPKMTIEKLLEYG 394

Query: 489 HMLVQEQDNVKRVQL 445
           +MLV EQ+NVKRV+L
Sbjct: 395 NMLVMEQENVKRVKL 409

>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score =  102 bits (254), Expect = 1e-21
 Identities = 51/85 (60%), Positives = 64/85 (75%)
 Frame = -3

Query: 669 PGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYG 490
           PGQSIDFFGALRARVYDD VR+W+  TG++ IG++LVN+R   V   +  M +  L++YG
Sbjct: 311 PGQSIDFFGALRARVYDDMVRQWITDTGVDKIGQQLVNARQ-KVAMPKVSMDLNVLIKYG 369

Query: 489 HMLVQEQDNVKRVQLADTYMSQAAL 415
             LV EQ+NVKRVQLAD Y+S A L
Sbjct: 370 KSLVDEQENVKRVQLADAYLSGAEL 394

>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score = 81.3 bits (199), Expect = 3e-15
 Identities = 35/79 (44%), Positives = 53/79 (67%)
 Frame = -3

Query: 669 PGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYG 490
           P QSIDFF ALR+R+YD+++R ++   G EN+  R+VNS +GP  F++P  T+  L+E  
Sbjct: 211 PNQSIDFFSALRSRIYDEQIRDFIHQVGYENVSLRVVNSLEGPPAFKKPDFTLSHLIESA 270

Query: 489 HMLVQEQDNVKRVQLADTY 433
           + +V EQ  ++  QL D Y
Sbjct: 271 NFMVAEQKRIETSQLVDEY 289

>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score = 73.9 bits (180), Expect = 4e-13
 Identities = 34/79 (43%), Positives = 51/79 (64%)
 Frame = -3

Query: 669 PGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYG 490
           P QSIDFF ALR+R+YD ++R ++   G E I  R+VNS + P  F++P  ++  L+E G
Sbjct: 211 PKQSIDFFSALRSRIYDIQIRDFIHKVGFERISLRVVNSLEAPPEFKKPDFSLAHLIESG 270

Query: 489 HMLVQEQDNVKRVQLADTY 433
           ++++ EQ  V   QL D Y
Sbjct: 271 NLVLGEQQRVDNSQLVDEY 289

>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast (RuBisCO activase) (RA) (Fragments)
          Length = 32

 Score = 38.1 bits (87), Expect = 0.024
 Identities = 23/55 (41%), Positives = 25/55 (45%)
 Frame = -3

Query: 669 PGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEK 505
           PGQSIDFFGALR                            +GP TFEQP MT+EK
Sbjct: 6   PGQSIDFFGALR----------------------------EGPPTFEQPAMTIEK 32

>EF1A2_XENLA (P17507) Elongation factor 1-alpha, oocyte form (EF-1-alpha-O)|
           (EF-1AO) (42S p48)
          Length = 461

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
 Frame = -3

Query: 540 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 385
           VTF    +T E K +E  H  +QE         NVK + + D      A    N   M+ 
Sbjct: 278 VTFAPSNVTTEVKSVEMHHEALQEALPGDNVGFNVKNISVKDIRRGNVAGDSKNDPPMQA 337

Query: 384 GSFYG*KILHTHPPSLAA 331
           GSF    I+  HP  ++A
Sbjct: 338 GSFTAQVIILNHPGQISA 355

>EF1A_ONCVO (P27592) Elongation factor 1-alpha (EF-1-alpha)|
          Length = 464

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
 Frame = -3

Query: 540 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 385
           VTF    +T E K +E  H  +QE         NVK + + D      A    N  A +T
Sbjct: 278 VTFAPQNLTTEVKSVEMHHEALQEALPGDNVGFNVKNISIKDIRRGSVASDSKNDPAKET 337

Query: 384 GSFYG*KILHTHPPSLAA 331
             F    I+  HP  ++A
Sbjct: 338 KMFTAQVIIMNHPGQISA 355

>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor|
          Length = 1346

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +2

Query: 437 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 541
           + +SC+R TL    T  CP  SS +TVI+ C  ++
Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453

>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor|
          Length = 521

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = -3

Query: 603 WVGSTGIENIGKRLVNSRDGPVT-FEQPKMTVEKLLE 496
           W+GS  I+  G+RL++SRD  +T  E P++ ++ LLE
Sbjct: 222 WLGSW-IKEGGRRLLSSRDKKITCAEPPRLALQSLLE 257


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,045,493
Number of Sequences: 219361
Number of extensions: 1990219
Number of successful extensions: 5728
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 5519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5726
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6541540170
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)