ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal33a16 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK069811.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030D05, full insert sequence Length = 1579 Score = 400 bits (202), Expect = e-108 Identities = 350/402 (87%), Gaps = 1/402 (0%) Strand = Plus / Minus Query: 177 gtctcacatgtacagcccctccggtacaccttccttcttcttgaacattaccttctcttt 236 ||||||||| || ||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1434 gtctcacatataaagcccttccggtacaccttccttcttcttgaacatgaccttctcttt 1375 Query: 237 ggccttcttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatcc 296 |||||||||||| || ||||||||||||||||| |||||||| ||||| || |||||||| Sbjct: 1374 ggccttcttgaaatcggcatgtgtcaccttcattctgcgctcccttaaagcgagcaatcc 1315 Query: 297 agcttcagtacaaatagctttgatatcagcaccagaaaactcatctttggtcatcacaaa 356 || || ||||| || |||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 1314 ggcctccgtacatattgctttgatgtcagcaccagaaaactcatccttggtcatcacaaa 1255 Query: 357 ctcttctaggttcacatcttctgccaatgtcatcttagcagtgtgtatctgaaagatacg 416 |||||||||||| ||||| ||||||||||||||||||| ||||||||||| ||||| || Sbjct: 1254 ctcttctaggttaacatcatctgccaatgtcatcttagatgtgtgtatctggaagatccg 1195 Query: 417 ccgtcgtgttttaatatctggcaatggaaattcaatctttctgtctattcggcctggtcn 476 || | |||||||||||||| || ||||||||||||||||||||||| || || |||| Sbjct: 1194 cctcctggttttaatatctggtaacggaaattcaatctttctgtctatccgaccaggtcg 1135 Query: 477 aagcaaagctgnntcaaggctctcaatgcngtttgttgctanaataaccttttacatntn 536 ||||||||||| ||||| || ||||||| |||||||||| ||||| |||| |||| | Sbjct: 1134 aagcaaagctgggtcaagactttcaatgcgatttgttgctaaaataa-ctttaacatctc 1076 Query: 537 ctnttgaatcaaaaccatncanntnatttaacaactccaaca 578 | ||||||||||||||| || | ||| | ||||||||||| Sbjct: 1075 cccttgaatcaaaaccatccagctgattaagcaactccaaca 1034
>dbj|AK058779.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-C01, full insert sequence Length = 651 Score = 400 bits (202), Expect = e-108 Identities = 350/402 (87%), Gaps = 1/402 (0%) Strand = Plus / Minus Query: 177 gtctcacatgtacagcccctccggtacaccttccttcttcttgaacattaccttctcttt 236 ||||||||| || ||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 445 gtctcacatataaagcccttccggtacaccttccttcttcttgaacatgaccttctcttt 386 Query: 237 ggccttcttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatcc 296 |||||||||||| || ||||||||||||||||| |||||||| ||||| || |||||||| Sbjct: 385 ggccttcttgaaatcggcatgtgtcaccttcattctgcgctcccttaaagcgagcaatcc 326 Query: 297 agcttcagtacaaatagctttgatatcagcaccagaaaactcatctttggtcatcacaaa 356 || || ||||| || |||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 325 ggcctccgtacatattgctttgatgtcagcaccagaaaactcatccttggtcatcacaaa 266 Query: 357 ctcttctaggttcacatcttctgccaatgtcatcttagcagtgtgtatctgaaagatacg 416 |||||||||||| ||||| ||||||||||||||||||| ||||||||||| ||||| || Sbjct: 265 ctcttctaggttaacatcatctgccaatgtcatcttagatgtgtgtatctggaagatccg 206 Query: 417 ccgtcgtgttttaatatctggcaatggaaattcaatctttctgtctattcggcctggtcn 476 || | |||||||||||||| || ||||||||||||||||||||||| || || |||| Sbjct: 205 cctcctggttttaatatctggtaacggaaattcaatctttctgtctatccgaccaggtcg 146 Query: 477 aagcaaagctgnntcaaggctctcaatgcngtttgttgctanaataaccttttacatntn 536 ||||||||||| ||||| || ||||||| |||||||||| ||||| |||| |||| | Sbjct: 145 aagcaaagctgggtcaagactttcaatgcgatttgttgctaaaataa-ctttaacatctc 87 Query: 537 ctnttgaatcaaaaccatncanntnatttaacaactccaaca 578 | ||||||||||||||| || | ||| | ||||||||||| Sbjct: 86 cccttgaatcaaaaccatccagctgattaagcaactccaaca 45
>dbj|AB037154.1| Oryza sativa (japonica cultivar-group) OsRPT2b mRNA for 26S proteasome regulatory particle triple-A ATPase subunit2b, complete cds Length = 1616 Score = 400 bits (202), Expect = e-108 Identities = 350/402 (87%), Gaps = 1/402 (0%) Strand = Plus / Minus Query: 177 gtctcacatgtacagcccctccggtacaccttccttcttcttgaacattaccttctcttt 236 ||||||||| || ||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1378 gtctcacatataaagcccttccggtacaccttccttcttcttgaacatgaccttctcttt 1319 Query: 237 ggccttcttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatcc 296 |||||||||||| || ||||||||||||||||| |||||||| ||||| || |||||||| Sbjct: 1318 ggccttcttgaaatcggcatgtgtcaccttcattctgcgctcccttaaagcgagcaatcc 1259 Query: 297 agcttcagtacaaatagctttgatatcagcaccagaaaactcatctttggtcatcacaaa 356 || || ||||| || |||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 1258 ggcctccgtacatattgctttgatgtcagcaccagaaaactcatccttggtcatcacaaa 1199 Query: 357 ctcttctaggttcacatcttctgccaatgtcatcttagcagtgtgtatctgaaagatacg 416 |||||||||||| ||||| ||||||||||||||||||| ||||||||||| ||||| || Sbjct: 1198 ctcttctaggttaacatcatctgccaatgtcatcttagatgtgtgtatctggaagatccg 1139 Query: 417 ccgtcgtgttttaatatctggcaatggaaattcaatctttctgtctattcggcctggtcn 476 || | |||||||||||||| || ||||||||||||||||||||||| || || |||| Sbjct: 1138 cctcctggttttaatatctggtaacggaaattcaatctttctgtctatccgaccaggtcg 1079 Query: 477 aagcaaagctgnntcaaggctctcaatgcngtttgttgctanaataaccttttacatntn 536 ||||||||||| ||||| || ||||||| |||||||||| ||||| |||| |||| | Sbjct: 1078 aagcaaagctgggtcaagactttcaatgcgatttgttgctaaaataa-ctttaacatctc 1020 Query: 537 ctnttgaatcaaaaccatncanntnatttaacaactccaaca 578 | ||||||||||||||| || | ||| | ||||||||||| Sbjct: 1019 cccttgaatcaaaaccatccagctgattaagcaactccaaca 978
>ref|NM_185558.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1597 Score = 309 bits (156), Expect = 5e-81 Identities = 246/276 (89%) Strand = Plus / Minus Query: 180 tcacatgtacagcccctccggtacaccttccttcttcttgaacattaccttctctttggc 239 ||||||||| || |||||||| ||||||||||||||||||||||| |||||||| || || Sbjct: 1439 tcacatgtaaagaccctccggcacaccttccttcttcttgaacatcaccttctcctttgc 1380 Query: 240 cttcttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagc 299 |||||||||||||||||||||||||||||| | ||| ||||| || ||||| | |||||| Sbjct: 1379 cttcttgaagtcagcatgtgtcaccttcattcggcgttctctcaaagcaagaagtccagc 1320 Query: 300 ttcagtacaaatagctttgatatcagcaccagaaaactcatctttggtcatcacaaactc 359 ||||||||| || ||||||||||||||||| ||||||||||| |||||||| |||||||| Sbjct: 1319 ttcagtacatattgctttgatatcagcaccggaaaactcatccttggtcatgacaaactc 1260 Query: 360 ttctaggttcacatcttctgccaatgtcatcttagcagtgtgtatctgaaagatacgccg 419 ||| ||||||||||| ||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 1259 ttccaggttcacatcatctgccaatgtcatcttagatgtgtgtatctggaagatgcgccg 1200 Query: 420 tcgtgttttaatatctggcaatggaaattcaatctt 455 | |||||||||||||||| |||||||| ||||| Sbjct: 1199 cctagttttaatatctggcagaggaaattctatctt 1164
>ref|XM_507415.1| PREDICTED Oryza sativa (japonica cultivar-group), P0034A04.112 mRNA Length = 1599 Score = 309 bits (156), Expect = 5e-81 Identities = 246/276 (89%) Strand = Plus / Minus Query: 180 tcacatgtacagcccctccggtacaccttccttcttcttgaacattaccttctctttggc 239 ||||||||| || |||||||| ||||||||||||||||||||||| |||||||| || || Sbjct: 1438 tcacatgtaaagaccctccggcacaccttccttcttcttgaacatcaccttctcctttgc 1379 Query: 240 cttcttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagc 299 |||||||||||||||||||||||||||||| | ||| ||||| || ||||| | |||||| Sbjct: 1378 cttcttgaagtcagcatgtgtcaccttcattcggcgttctctcaaagcaagaagtccagc 1319 Query: 300 ttcagtacaaatagctttgatatcagcaccagaaaactcatctttggtcatcacaaactc 359 ||||||||| || ||||||||||||||||| ||||||||||| |||||||| |||||||| Sbjct: 1318 ttcagtacatattgctttgatatcagcaccggaaaactcatccttggtcatgacaaactc 1259 Query: 360 ttctaggttcacatcttctgccaatgtcatcttagcagtgtgtatctgaaagatacgccg 419 ||| ||||||||||| ||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 1258 ttccaggttcacatcatctgccaatgtcatcttagatgtgtgtatctggaagatgcgccg 1199 Query: 420 tcgtgttttaatatctggcaatggaaattcaatctt 455 | |||||||||||||||| |||||||| ||||| Sbjct: 1198 cctagttttaatatctggcagaggaaattctatctt 1163
>ref|XM_506590.2| PREDICTED Oryza sativa (japonica cultivar-group), P0034A04.112 mRNA Length = 1615 Score = 309 bits (156), Expect = 5e-81 Identities = 246/276 (89%) Strand = Plus / Minus Query: 180 tcacatgtacagcccctccggtacaccttccttcttcttgaacattaccttctctttggc 239 ||||||||| || |||||||| ||||||||||||||||||||||| |||||||| || || Sbjct: 1438 tcacatgtaaagaccctccggcacaccttccttcttcttgaacatcaccttctcctttgc 1379 Query: 240 cttcttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagc 299 |||||||||||||||||||||||||||||| | ||| ||||| || ||||| | |||||| Sbjct: 1378 cttcttgaagtcagcatgtgtcaccttcattcggcgttctctcaaagcaagaagtccagc 1319 Query: 300 ttcagtacaaatagctttgatatcagcaccagaaaactcatctttggtcatcacaaactc 359 ||||||||| || ||||||||||||||||| ||||||||||| |||||||| |||||||| Sbjct: 1318 ttcagtacatattgctttgatatcagcaccggaaaactcatccttggtcatgacaaactc 1259 Query: 360 ttctaggttcacatcttctgccaatgtcatcttagcagtgtgtatctgaaagatacgccg 419 ||| ||||||||||| ||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 1258 ttccaggttcacatcatctgccaatgtcatcttagatgtgtgtatctggaagatgcgccg 1199 Query: 420 tcgtgttttaatatctggcaatggaaattcaatctt 455 | |||||||||||||||| |||||||| ||||| Sbjct: 1198 cctagttttaatatctggcagaggaaattctatctt 1163
>dbj|AK105861.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-A02, full insert sequence Length = 1599 Score = 309 bits (156), Expect = 5e-81 Identities = 246/276 (89%) Strand = Plus / Minus Query: 180 tcacatgtacagcccctccggtacaccttccttcttcttgaacattaccttctctttggc 239 ||||||||| || |||||||| ||||||||||||||||||||||| |||||||| || || Sbjct: 1438 tcacatgtaaagaccctccggcacaccttccttcttcttgaacatcaccttctcctttgc 1379 Query: 240 cttcttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagc 299 |||||||||||||||||||||||||||||| | ||| ||||| || ||||| | |||||| Sbjct: 1378 cttcttgaagtcagcatgtgtcaccttcattcggcgttctctcaaagcaagaagtccagc 1319 Query: 300 ttcagtacaaatagctttgatatcagcaccagaaaactcatctttggtcatcacaaactc 359 ||||||||| || ||||||||||||||||| ||||||||||| |||||||| |||||||| Sbjct: 1318 ttcagtacatattgctttgatatcagcaccggaaaactcatccttggtcatgacaaactc 1259 Query: 360 ttctaggttcacatcttctgccaatgtcatcttagcagtgtgtatctgaaagatacgccg 419 ||| ||||||||||| ||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 1258 ttccaggttcacatcatctgccaatgtcatcttagatgtgtgtatctggaagatgcgccg 1199 Query: 420 tcgtgttttaatatctggcaatggaaattcaatctt 455 | |||||||||||||||| |||||||| ||||| Sbjct: 1198 cctagttttaatatctggcagaggaaattctatctt 1163
>dbj|AK099264.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018C04, full insert sequence Length = 1597 Score = 309 bits (156), Expect = 5e-81 Identities = 246/276 (89%) Strand = Plus / Minus Query: 180 tcacatgtacagcccctccggtacaccttccttcttcttgaacattaccttctctttggc 239 ||||||||| || |||||||| ||||||||||||||||||||||| |||||||| || || Sbjct: 1439 tcacatgtaaagaccctccggcacaccttccttcttcttgaacatcaccttctcctttgc 1380 Query: 240 cttcttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagc 299 |||||||||||||||||||||||||||||| | ||| ||||| || ||||| | |||||| Sbjct: 1379 cttcttgaagtcagcatgtgtcaccttcattcggcgttctctcaaagcaagaagtccagc 1320 Query: 300 ttcagtacaaatagctttgatatcagcaccagaaaactcatctttggtcatcacaaactc 359 ||||||||| || ||||||||||||||||| ||||||||||| |||||||| |||||||| Sbjct: 1319 ttcagtacatattgctttgatatcagcaccggaaaactcatccttggtcatgacaaactc 1260 Query: 360 ttctaggttcacatcttctgccaatgtcatcttagcagtgtgtatctgaaagatacgccg 419 ||| ||||||||||| ||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 1259 ttccaggttcacatcatctgccaatgtcatcttagatgtgtgtatctggaagatgcgccg 1200 Query: 420 tcgtgttttaatatctggcaatggaaattcaatctt 455 | |||||||||||||||| |||||||| ||||| Sbjct: 1199 cctagttttaatatctggcagaggaaattctatctt 1164
>dbj|AK070759.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065N19, full insert sequence Length = 947 Score = 309 bits (156), Expect = 5e-81 Identities = 246/276 (89%) Strand = Plus / Minus Query: 180 tcacatgtacagcccctccggtacaccttccttcttcttgaacattaccttctctttggc 239 ||||||||| || |||||||| ||||||||||||||||||||||| |||||||| || || Sbjct: 739 tcacatgtaaagaccctccggcacaccttccttcttcttgaacatcaccttctcctttgc 680 Query: 240 cttcttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagc 299 |||||||||||||||||||||||||||||| | ||| ||||| || ||||| | |||||| Sbjct: 679 cttcttgaagtcagcatgtgtcaccttcattcggcgttctctcaaagcaagaagtccagc 620 Query: 300 ttcagtacaaatagctttgatatcagcaccagaaaactcatctttggtcatcacaaactc 359 ||||||||| || ||||||||||||||||| ||||||||||| |||||||| |||||||| Sbjct: 619 ttcagtacatattgctttgatatcagcaccggaaaactcatccttggtcatgacaaactc 560 Query: 360 ttctaggttcacatcttctgccaatgtcatcttagcagtgtgtatctgaaagatacgccg 419 ||| ||||||||||| ||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 559 ttccaggttcacatcatctgccaatgtcatcttagatgtgtgtatctggaagatgcgccg 500 Query: 420 tcgtgttttaatatctggcaatggaaattcaatctt 455 | |||||||||||||||| |||||||| ||||| Sbjct: 499 cctagttttaatatctggcagaggaaattctatctt 464
>dbj|AK058311.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H11, full insert sequence Length = 1615 Score = 309 bits (156), Expect = 5e-81 Identities = 246/276 (89%) Strand = Plus / Minus Query: 180 tcacatgtacagcccctccggtacaccttccttcttcttgaacattaccttctctttggc 239 ||||||||| || |||||||| ||||||||||||||||||||||| |||||||| || || Sbjct: 1438 tcacatgtaaagaccctccggcacaccttccttcttcttgaacatcaccttctcctttgc 1379 Query: 240 cttcttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagc 299 |||||||||||||||||||||||||||||| | ||| ||||| || ||||| | |||||| Sbjct: 1378 cttcttgaagtcagcatgtgtcaccttcattcggcgttctctcaaagcaagaagtccagc 1319 Query: 300 ttcagtacaaatagctttgatatcagcaccagaaaactcatctttggtcatcacaaactc 359 ||||||||| || ||||||||||||||||| ||||||||||| |||||||| |||||||| Sbjct: 1318 ttcagtacatattgctttgatatcagcaccggaaaactcatccttggtcatgacaaactc 1259 Query: 360 ttctaggttcacatcttctgccaatgtcatcttagcagtgtgtatctgaaagatacgccg 419 ||| ||||||||||| ||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 1258 ttccaggttcacatcatctgccaatgtcatcttagatgtgtgtatctggaagatgcgccg 1199 Query: 420 tcgtgttttaatatctggcaatggaaattcaatctt 455 | |||||||||||||||| |||||||| ||||| Sbjct: 1198 cctagttttaatatctggcagaggaaattctatctt 1163
>dbj|D17789.1|RICHTBP2 Oryza sativa (japonica cultivar-group) mRNA for homologue of Tat binding protein, complete cds Length = 1609 Score = 309 bits (156), Expect = 5e-81 Identities = 246/276 (89%) Strand = Plus / Minus Query: 180 tcacatgtacagcccctccggtacaccttccttcttcttgaacattaccttctctttggc 239 ||||||||| || |||||||| ||||||||||||||||||||||| |||||||| || || Sbjct: 1406 tcacatgtaaagaccctccggcacaccttccttcttcttgaacatcaccttctcctttgc 1347 Query: 240 cttcttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagc 299 |||||||||||||||||||||||||||||| | ||| ||||| || ||||| | |||||| Sbjct: 1346 cttcttgaagtcagcatgtgtcaccttcattcggcgttctctcaaagcaagaagtccagc 1287 Query: 300 ttcagtacaaatagctttgatatcagcaccagaaaactcatctttggtcatcacaaactc 359 ||||||||| || ||||||||||||||||| ||||||||||| |||||||| |||||||| Sbjct: 1286 ttcagtacatattgctttgatatcagcaccggaaaactcatccttggtcatgacaaactc 1227 Query: 360 ttctaggttcacatcttctgccaatgtcatcttagcagtgtgtatctgaaagatacgccg 419 ||| ||||||||||| ||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 1226 ttccaggttcacatcatctgccaatgtcatcttagatgtgtgtatctggaagatgcgccg 1167 Query: 420 tcgtgttttaatatctggcaatggaaattcaatctt 455 | |||||||||||||||| |||||||| ||||| Sbjct: 1166 cctagttttaatatctggcagaggaaattctatctt 1131
>gb|AY105318.1| Zea mays PCO073117 mRNA sequence Length = 866 Score = 299 bits (151), Expect = 5e-78 Identities = 338/403 (83%), Gaps = 1/403 (0%) Strand = Plus / Minus Query: 176 agtctcacatgtacagcccctccggtacaccttccttcttcttgaacattaccttctctt 235 |||||||||| || | |||||||| || ||||| |||||||||||||| ||||| |||| Sbjct: 559 agtctcacatatataagccctccggcacgccttctttcttcttgaacataaccttttctt 500 Query: 236 tggccttcttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatc 295 |||||||||||||||| ||||| ||||||||||||| |||||||| || |||||||| | Sbjct: 499 tggccttcttgaagtctgcatgcgtcaccttcatccgccgctctctcaaagcaagcaagc 440 Query: 296 cagcttcagtacaaatagctttgatatcagcaccagaaaactcatctttggtcatcacaa 355 |||||||||||||||| || ||||| |||||||| |||||||||||||| | ||| | || Sbjct: 439 cagcttcagtacaaatggccttgatgtcagcacctgaaaactcatcttttgacataataa 380 Query: 356 actcttctaggttcacatcttctgccaatgtcatcttagcagtgtgtatctgaaagatac 415 ||||||||||||| ||||| || |||| |||||| || | ||||||||||| ||||| | Sbjct: 379 actcttctaggtttacatcatcagccagtgtcattttcgatgtgtgtatctggaagatgc 320 Query: 416 gccgtcgtgttttaatatctggcaatggaaattcaatctttctgtctattcggcctggtc 475 |||| | || || | ||| || || || ||||||||||||||||| ||||| ||||| | Sbjct: 319 gccgcctagtcttgacatcaggtaaagggaattcaatctttctgtcaattcgacctgggc 260 Query: 476 naagcaaagctgnntcaaggctctcaatgcngtttgttgctanaataaccttttacatnt 535 |||||| |||| ||||| |||||||| | |||||||||| ||||| |||| |||| | Sbjct: 259 gaagcaaggctggatcaagactctcaatacgatttgttgctagaataa-ctttaacatct 201 Query: 536 nctnttgaatcaaaaccatncanntnatttaacaactccaaca 578 || ||||||||||||||| || | ||||||||||||||||| Sbjct: 200 cctcttgaatcaaaaccatccagctgatttaacaactccaaca 158
>gb|AY108940.1| Zea mays PCO101909 mRNA sequence Length = 961 Score = 272 bits (137), Expect = 1e-69 Identities = 288/340 (84%) Strand = Plus / Minus Query: 182 acatgtacagcccctccggtacaccttccttcttcttgaacattaccttctctttggcct 241 ||||||| || || ||||| |||||||||||||||||| |||| |||||||| || |||| Sbjct: 720 acatgtagagaccatccggaacaccttccttcttcttgtacatcaccttctcctttgcct 661 Query: 242 tcttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagctt 301 ||||||| || ||||| ||||||||||| ||||| ||||||||||||||||||||||| | Sbjct: 660 tcttgaaatctgcatgggtcaccttcattctgcgttctcttaaggcaagcaatccagcct 601 Query: 302 cagtacaaatagctttgatatcagcaccagaaaactcatctttggtcatcacaaactctt 361 | || || || || || ||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 600 ctgtgcagattgccttaatatcagcacccgaaaactcgtctttggtcataacaaactctt 541 Query: 362 ctaggttcacatcttctgccaatgtcatcttagcagtgtgtatctgaaagatacgccgtc 421 | | ||||||||| || || |||||||| || | ||||||||||| ||||| || |||| Sbjct: 540 ccaagttcacatcatcagctaatgtcattttcgatgtgtgtatctggaagatgcgtcgtc 481 Query: 422 gtgttttaatatctggcaatggaaattcaatctttctgtctattcggcctggtcnaagca 481 |||||||||||||| | |||||||||||||| | |||||| |||||||| | ||||| Sbjct: 480 tagttttaatatctggtagaggaaattcaatcttccggtctatacggcctggccgaagca 421 Query: 482 aagctgnntcaaggctctcaatgcngtttgttgctanaat 521 | |||| ||||| || ||||||| ||||||||||| ||| Sbjct: 420 aggctggatcaagactttcaatgcggtttgttgctagaat 381
>gb|AY105631.1| Zea mays PCO101908 mRNA sequence Length = 1272 Score = 214 bits (108), Expect = 2e-52 Identities = 283/343 (82%) Strand = Plus / Minus Query: 182 acatgtacagcccctccggtacaccttccttcttcttgaacattaccttctctttggcct 241 ||||||| || || ||||| |||||||||||||||||| |||| |||||||| || || | Sbjct: 989 acatgtagagaccatccggaacaccttccttcttcttgtacatcaccttctcctttgctt 930 Query: 242 tcttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagctt 301 ||||||| || ||||| ||||| ||||| || || ||||||||||| ||||||||||| | Sbjct: 929 tcttgaaatctgcatgggtcactttcattctacgttctcttaaggcgagcaatccagcct 870 Query: 302 cagtacaaatagctttgatatcagcaccagaaaactcatctttggtcatcacaaactctt 361 | || || || || || |||||||| || || ||||||||||||||||| |||||||||| Sbjct: 869 ccgtgcagatggccttaatatcagcgcccgagaactcatctttggtcataacaaactctt 810 Query: 362 ctaggttcacatcttctgccaatgtcatcttagcagtgtgtatctgaaagatacgccgtc 421 | | ||||||||| || || |||||||| || | ||||| ||||| ||||| || | || Sbjct: 809 ccaagttcacatcgtcagctaatgtcatttttgatgtgtgaatctggaagatgcgtcttc 750 Query: 422 gtgttttaatatctggcaatggaaattcaatctttctgtctattcggcctggtcnaagca 481 |||||||||||||| | || ||||||||||| | |||||| |||||||| | ||||| Sbjct: 749 tagttttaatatctgggagagggaattcaatcttccggtctatacggcctggccgaagca 690 Query: 482 aagctgnntcaaggctctcaatgcngtttgttgctanaataac 524 |||| | ||||| || ||||||| ||||||||||| |||||| Sbjct: 689 aagcaggatcaagactttcaatgcggtttgttgctagaataac 647
>gb|DQ222507.1| Solanum tuberosum clone 115D06 26S proteasome subunit 4-like mRNA, complete cds Length = 1581 Score = 174 bits (88), Expect = 2e-40 Identities = 214/256 (83%) Strand = Plus / Minus Query: 211 ttcttcttgaacattaccttctctttggccttcttgaagtcagcatgtgtcaccttcatc 270 |||||||||||||| ||||| ||||| ||||||||||| || ||||| |||||||||| Sbjct: 1341 ttcttcttgaacatcaccttatcttttgccttcttgaaatctgcatgaatcaccttcata 1282 Query: 271 ctgcgctctcttaaggcaagcaatccagcttcagtacaaatagctttgatatcagcacca 330 | || ||||||| ||||||||||||||||||||||| || || ||||||||||| ||| Sbjct: 1281 cgccgttctcttagagcaagcaatccagcttcagtacatattgccttgatatcagctcca 1222 Query: 331 gaaaactcatctttggtcatcacaaactcttctaggttcacatcttctgccaatgtcatc 390 ||||| ||||| |||||||| ||||| ||||||||||| ||||| || | ||| |||||| Sbjct: 1221 gaaaattcatccttggtcataacaaattcttctaggttgacatcatcagacaaagtcatc 1162 Query: 391 ttagcagtgtgtatctgaaagatacgccgtcgtgttttaatatctggcaatggaaattca 450 || | ||||||||||| || || |||| | |||||||||||| || | || || ||| Sbjct: 1161 ttgcctgtgtgtatctggaatatgcgcctccttgttttaatatcaggaagagggaactca 1102 Query: 451 atctttctgtctattc 466 ||||| |||||||||| Sbjct: 1101 atcttcctgtctattc 1086
>ref|NM_127572.2| Arabidopsis thaliana ATP binding / ATPase/ hydrolase/ nucleoside-triphosphatase/ nucleotide binding AT2G20140 mRNA, complete cds Length = 1610 Score = 172 bits (87), Expect = 8e-40 Identities = 302/375 (80%), Gaps = 1/375 (0%) Strand = Plus / Minus Query: 180 tcacatgtacagcccctccggtacaccttccttcttcttgaacattaccttctctttggc 239 ||||||||| || || || || || ||||| |||||||||||||| |||||||| || || Sbjct: 1368 tcacatgtaaagaccttcaggaactccttctttcttcttgaacataaccttctccttcgc 1309 Query: 240 cttcttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagc 299 |||||||||||| |||| ||||| ||||||| |||||||| | ||||||| ||||| Sbjct: 1308 cttcttgaagtccacatgcgtcactttcatccgacgctctctaagagcaagcagaccagc 1249 Query: 300 ttcagtacaaatagctttgatatcagcaccagaaaactcatctttggtcatcacaaactc 359 ||| || || || || || |||||||| || || ||||| ||||| ||||| |||||||| Sbjct: 1248 ttctgtgcatattgcctttatatcagctcctgagaactcgtcttttgtcattacaaactc 1189 Query: 360 ttctaggttcacatcttctgccaatgtcatcttagcagtgtgtatctgaaagatacgccg 419 ||||| |||||||||||| ||||| |||||||| | ||||||||||| |||||||| | Sbjct: 1188 ttctaagttcacatcttcagccaaagtcatctttgatgtgtgtatctggaagatacgtct 1129 Query: 420 tcgtgttttaatatctggcaatggaaattcaatctttctgtctattcggcctggtcnaag 479 || |||||| |||||||| | || ||||| || || ||||| || |||||||||| ||| Sbjct: 1128 tcttgttttgatatctggaagagggaattcgattttcctgtcgatccggcctggtctaag 1069 Query: 480 caaagctgnntcaaggctctcaatgcngtttgttgctanaataaccttttacatntnctn 539 | || | ||||| ||||| || | |||||| || | ||||||| || |||| | || Sbjct: 1068 aagtgccgggtcaagactctcgatcctgtttgtcgcgagaataacc-ttaacatctcctc 1010 Query: 540 ttgaatcaaaaccat 554 |||||||||| |||| Sbjct: 1009 ttgaatcaaacccat 995
>gb|AY056335.1| Arabidopsis thaliana putative 26S proteasome subunit 4 (At2g20140) mRNA, complete cds Length = 1363 Score = 172 bits (87), Expect = 8e-40 Identities = 302/375 (80%), Gaps = 1/375 (0%) Strand = Plus / Minus Query: 180 tcacatgtacagcccctccggtacaccttccttcttcttgaacattaccttctctttggc 239 ||||||||| || || || || || ||||| |||||||||||||| |||||||| || || Sbjct: 1332 tcacatgtaaagaccttcaggaactccttctttcttcttgaacataaccttctccttcgc 1273 Query: 240 cttcttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagc 299 |||||||||||| |||| ||||| ||||||| |||||||| | ||||||| ||||| Sbjct: 1272 cttcttgaagtccacatgcgtcactttcatccgacgctctctaagagcaagcagaccagc 1213 Query: 300 ttcagtacaaatagctttgatatcagcaccagaaaactcatctttggtcatcacaaactc 359 ||| || || || || || |||||||| || || ||||| ||||| ||||| |||||||| Sbjct: 1212 ttctgtgcatattgcctttatatcagctcctgagaactcgtcttttgtcattacaaactc 1153 Query: 360 ttctaggttcacatcttctgccaatgtcatcttagcagtgtgtatctgaaagatacgccg 419 ||||| |||||||||||| ||||| |||||||| | ||||||||||| |||||||| | Sbjct: 1152 ttctaagttcacatcttcagccaaagtcatctttgatgtgtgtatctggaagatacgtct 1093 Query: 420 tcgtgttttaatatctggcaatggaaattcaatctttctgtctattcggcctggtcnaag 479 || |||||| |||||||| | || ||||| || || ||||| || |||||||||| ||| Sbjct: 1092 tcttgttttgatatctggaagagggaattcgattttcctgtcgatccggcctggtctaag 1033 Query: 480 caaagctgnntcaaggctctcaatgcngtttgttgctanaataaccttttacatntnctn 539 | || | ||||| ||||| || | |||||| || | ||||||| || |||| | || Sbjct: 1032 aagtgccgggtcaagactctcgatcctgtttgtcgcgagaataacc-ttaacatctcctc 974 Query: 540 ttgaatcaaaaccat 554 |||||||||| |||| Sbjct: 973 ttgaatcaaacccat 959
>gb|AY035072.1| Arabidopsis thaliana putative 26S proteasome subunit 4 (At2g20140) mRNA, complete cds Length = 1586 Score = 172 bits (87), Expect = 8e-40 Identities = 302/375 (80%), Gaps = 1/375 (0%) Strand = Plus / Minus Query: 180 tcacatgtacagcccctccggtacaccttccttcttcttgaacattaccttctctttggc 239 ||||||||| || || || || || ||||| |||||||||||||| |||||||| || || Sbjct: 1350 tcacatgtaaagaccttcaggaactccttctttcttcttgaacataaccttctccttcgc 1291 Query: 240 cttcttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagc 299 |||||||||||| |||| ||||| ||||||| |||||||| | ||||||| ||||| Sbjct: 1290 cttcttgaagtccacatgcgtcactttcatccgacgctctctaagagcaagcagaccagc 1231 Query: 300 ttcagtacaaatagctttgatatcagcaccagaaaactcatctttggtcatcacaaactc 359 ||| || || || || || |||||||| || || ||||| ||||| ||||| |||||||| Sbjct: 1230 ttctgtgcatattgcctttatatcagctcctgagaactcgtcttttgtcattacaaactc 1171 Query: 360 ttctaggttcacatcttctgccaatgtcatcttagcagtgtgtatctgaaagatacgccg 419 ||||| |||||||||||| ||||| |||||||| | ||||||||||| |||||||| | Sbjct: 1170 ttctaagttcacatcttcagccaaagtcatctttgatgtgtgtatctggaagatacgtct 1111 Query: 420 tcgtgttttaatatctggcaatggaaattcaatctttctgtctattcggcctggtcnaag 479 || |||||| |||||||| | || ||||| || || ||||| || |||||||||| ||| Sbjct: 1110 tcttgttttgatatctggaagagggaattcgattttcctgtcgatccggcctggtctaag 1051 Query: 480 caaagctgnntcaaggctctcaatgcngtttgttgctanaataaccttttacatntnctn 539 | || | ||||| ||||| || | |||||| || | ||||||| || |||| | || Sbjct: 1050 aagtgccgggtcaagactctcgatcctgtttgtcgcgagaataacc-ttaacatctcctc 992 Query: 540 ttgaatcaaaaccat 554 |||||||||| |||| Sbjct: 991 ttgaatcaaacccat 977
>gb|AF372977.1|AF372977 Arabidopsis thaliana At2g20140/T2G17.6 mRNA, complete cds Length = 1578 Score = 172 bits (87), Expect = 8e-40 Identities = 302/375 (80%), Gaps = 1/375 (0%) Strand = Plus / Minus Query: 180 tcacatgtacagcccctccggtacaccttccttcttcttgaacattaccttctctttggc 239 ||||||||| || || || || || ||||| |||||||||||||| |||||||| || || Sbjct: 1355 tcacatgtaaagaccttcaggaactccttctttcttcttgaacataaccttctccttcgc 1296 Query: 240 cttcttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagc 299 |||||||||||| |||| ||||| ||||||| |||||||| | ||||||| ||||| Sbjct: 1295 cttcttgaagtccacatgcgtcactttcatccgacgctctctaagagcaagcagaccagc 1236 Query: 300 ttcagtacaaatagctttgatatcagcaccagaaaactcatctttggtcatcacaaactc 359 ||| || || || || || |||||||| || || ||||| ||||| ||||| |||||||| Sbjct: 1235 ttctgtgcatattgcctttatatcagctcctgagaactcgtcttttgtcattacaaactc 1176 Query: 360 ttctaggttcacatcttctgccaatgtcatcttagcagtgtgtatctgaaagatacgccg 419 ||||| |||||||||||| ||||| |||||||| | ||||||||||| |||||||| | Sbjct: 1175 ttctaagttcacatcttcagccaaagtcatctttgatgtgtgtatctggaagatacgtct 1116 Query: 420 tcgtgttttaatatctggcaatggaaattcaatctttctgtctattcggcctggtcnaag 479 || |||||| |||||||| | || ||||| || || ||||| || |||||||||| ||| Sbjct: 1115 tcttgttttgatatctggaagagggaattcgattttcctgtcgatccggcctggtctaag 1056 Query: 480 caaagctgnntcaaggctctcaatgcngtttgttgctanaataaccttttacatntnctn 539 | || | ||||| ||||| || | |||||| || | ||||||| || |||| | || Sbjct: 1055 aagtgccgggtcaagactctcgatcctgtttgtcgcgagaataacc-ttaacatctcctc 997 Query: 540 ttgaatcaaaaccat 554 |||||||||| |||| Sbjct: 996 ttgaatcaaacccat 982
>gb|AY087584.1| Arabidopsis thaliana clone 36815 mRNA, complete sequence Length = 1478 Score = 172 bits (87), Expect = 8e-40 Identities = 302/375 (80%), Gaps = 1/375 (0%) Strand = Plus / Minus Query: 180 tcacatgtacagcccctccggtacaccttccttcttcttgaacattaccttctctttggc 239 ||||||||| || || || || || ||||| |||||||||||||| |||||||| || || Sbjct: 1358 tcacatgtaaagaccttcaggaactccttctttcttcttgaacataaccttctccttcgc 1299 Query: 240 cttcttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagc 299 |||||||||||| |||| ||||| ||||||| |||||||| | ||||||| ||||| Sbjct: 1298 cttcttgaagtccacatgcgtcactttcatccgacgctctctaagagcaagcagaccagc 1239 Query: 300 ttcagtacaaatagctttgatatcagcaccagaaaactcatctttggtcatcacaaactc 359 ||| || || || || || |||||||| || || ||||| ||||| ||||| |||||||| Sbjct: 1238 ttctgtgcatattgcctttatatcagctcctgagaactcgtcttttgtcattacaaactc 1179 Query: 360 ttctaggttcacatcttctgccaatgtcatcttagcagtgtgtatctgaaagatacgccg 419 ||||| |||||||||||| ||||| |||||||| | ||||||||||| |||||||| | Sbjct: 1178 ttctaagttcacatcttcagccaaagtcatctttgatgtgtgtatctggaagatacgtct 1119 Query: 420 tcgtgttttaatatctggcaatggaaattcaatctttctgtctattcggcctggtcnaag 479 || |||||| |||||||| | || ||||| || || ||||| || |||||||||| ||| Sbjct: 1118 tcttgttttgatatctggaagagggaattcgattttcctgtcgatccggcctggtctaag 1059 Query: 480 caaagctgnntcaaggctctcaatgcngtttgttgctanaataaccttttacatntnctn 539 | || | ||||| ||||| || | |||||| || | ||||||| || |||| | || Sbjct: 1058 aagtgccgggtcaagactctcgatcctgtttgtcgcgagaataacc-ttaacatctcctc 1000 Query: 540 ttgaatcaaaaccat 554 |||||||||| |||| Sbjct: 999 ttgaatcaaacccat 985
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 170 bits (86), Expect = 3e-39 Identities = 131/146 (89%) Strand = Plus / Minus Query: 262 accttcatcctgcgctctcttaaggcaagcaatccagcttcagtacaaatagctttgata 321 |||||||| |||||||| ||||| || |||||||| || || ||||| || |||||||| Sbjct: 10437656 accttcattctgcgctcccttaaagcgagcaatccggcctccgtacatattgctttgatg 10437597 Query: 322 tcagcaccagaaaactcatctttggtcatcacaaactcttctaggttcacatcttctgcc 381 |||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 10437596 tcagcaccagaaaactcatccttggtcatcacaaactcttctaggttaacatcatctgcc 10437537 Query: 382 aatgtcatcttagcagtgtgtatctg 407 ||||||||||||| ||||||||||| Sbjct: 10437536 aatgtcatcttagatgtgtgtatctg 10437511 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Minus Query: 177 gtctcacatgtacagcccctccggtacaccttccttcttcttgaacattaccttctcttt 236 ||||||||| || ||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 10437928 gtctcacatataaagcccttccggtacaccttccttcttcttgaacatgaccttctcttt 10437869 Query: 237 ggccttcttgaagtcagcatgtgtcacct 265 |||||||||||| || ||||||||||||| Sbjct: 10437868 ggccttcttgaaatcggcatgtgtcacct 10437840 Score = 125 bits (63), Expect = 2e-25 Identities = 130/155 (83%), Gaps = 1/155 (0%) Strand = Plus / Minus Query: 424 gttttaatatctggcaatggaaattcaatctttctgtctattcggcctggtcnaagcaaa 483 |||||||||||||| || ||||||||||||||||||||||| || || |||| ||||||| Sbjct: 10437419 gttttaatatctggtaacggaaattcaatctttctgtctatccgaccaggtcgaagcaaa 10437360 Query: 484 gctgnntcaaggctctcaatgcngtttgttgctanaataaccttttacatntnctnttga 543 |||| ||||| || ||||||| |||||||||| ||||| |||| |||| | | |||| Sbjct: 10437359 gctgggtcaagactttcaatgcgatttgttgctaaaataa-ctttaacatctccccttga 10437301 Query: 544 atcaaaaccatncanntnatttaacaactccaaca 578 ||||||||||| || | ||| | ||||||||||| Sbjct: 10437300 atcaaaaccatccagctgattaagcaactccaaca 10437266
>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0039F10, complete sequence Length = 139714 Score = 170 bits (86), Expect = 3e-39 Identities = 131/146 (89%) Strand = Plus / Minus Query: 262 accttcatcctgcgctctcttaaggcaagcaatccagcttcagtacaaatagctttgata 321 |||||||| |||||||| ||||| || |||||||| || || ||||| || |||||||| Sbjct: 94209 accttcattctgcgctcccttaaagcgagcaatccggcctccgtacatattgctttgatg 94150 Query: 322 tcagcaccagaaaactcatctttggtcatcacaaactcttctaggttcacatcttctgcc 381 |||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 94149 tcagcaccagaaaactcatccttggtcatcacaaactcttctaggttaacatcatctgcc 94090 Query: 382 aatgtcatcttagcagtgtgtatctg 407 ||||||||||||| ||||||||||| Sbjct: 94089 aatgtcatcttagatgtgtgtatctg 94064 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Minus Query: 177 gtctcacatgtacagcccctccggtacaccttccttcttcttgaacattaccttctcttt 236 ||||||||| || ||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 94481 gtctcacatataaagcccttccggtacaccttccttcttcttgaacatgaccttctcttt 94422 Query: 237 ggccttcttgaagtcagcatgtgtcacct 265 |||||||||||| || ||||||||||||| Sbjct: 94421 ggccttcttgaaatcggcatgtgtcacct 94393 Score = 125 bits (63), Expect = 2e-25 Identities = 130/155 (83%), Gaps = 1/155 (0%) Strand = Plus / Minus Query: 424 gttttaatatctggcaatggaaattcaatctttctgtctattcggcctggtcnaagcaaa 483 |||||||||||||| || ||||||||||||||||||||||| || || |||| ||||||| Sbjct: 93972 gttttaatatctggtaacggaaattcaatctttctgtctatccgaccaggtcgaagcaaa 93913 Query: 484 gctgnntcaaggctctcaatgcngtttgttgctanaataaccttttacatntnctnttga 543 |||| ||||| || ||||||| |||||||||| ||||| |||| |||| | | |||| Sbjct: 93912 gctgggtcaagactttcaatgcgatttgttgctaaaataa-ctttaacatctccccttga 93854 Query: 544 atcaaaaccatncanntnatttaacaactccaaca 578 ||||||||||| || | ||| | ||||||||||| Sbjct: 93853 atcaaaaccatccagctgattaagcaactccaaca 93819
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 170 bits (86), Expect = 3e-39 Identities = 131/146 (89%) Strand = Plus / Minus Query: 262 accttcatcctgcgctctcttaaggcaagcaatccagcttcagtacaaatagctttgata 321 |||||||| |||||||| ||||| || |||||||| || || ||||| || |||||||| Sbjct: 10435757 accttcattctgcgctcccttaaagcgagcaatccggcctccgtacatattgctttgatg 10435698 Query: 322 tcagcaccagaaaactcatctttggtcatcacaaactcttctaggttcacatcttctgcc 381 |||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 10435697 tcagcaccagaaaactcatccttggtcatcacaaactcttctaggttaacatcatctgcc 10435638 Query: 382 aatgtcatcttagcagtgtgtatctg 407 ||||||||||||| ||||||||||| Sbjct: 10435637 aatgtcatcttagatgtgtgtatctg 10435612 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Minus Query: 177 gtctcacatgtacagcccctccggtacaccttccttcttcttgaacattaccttctcttt 236 ||||||||| || ||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 10436029 gtctcacatataaagcccttccggtacaccttccttcttcttgaacatgaccttctcttt 10435970 Query: 237 ggccttcttgaagtcagcatgtgtcacct 265 |||||||||||| || ||||||||||||| Sbjct: 10435969 ggccttcttgaaatcggcatgtgtcacct 10435941 Score = 125 bits (63), Expect = 2e-25 Identities = 130/155 (83%), Gaps = 1/155 (0%) Strand = Plus / Minus Query: 424 gttttaatatctggcaatggaaattcaatctttctgtctattcggcctggtcnaagcaaa 483 |||||||||||||| || ||||||||||||||||||||||| || || |||| ||||||| Sbjct: 10435520 gttttaatatctggtaacggaaattcaatctttctgtctatccgaccaggtcgaagcaaa 10435461 Query: 484 gctgnntcaaggctctcaatgcngtttgttgctanaataaccttttacatntnctnttga 543 |||| ||||| || ||||||| |||||||||| ||||| |||| |||| | | |||| Sbjct: 10435460 gctgggtcaagactttcaatgcgatttgttgctaaaataa-ctttaacatctccccttga 10435402 Query: 544 atcaaaaccatncanntnatttaacaactccaaca 578 ||||||||||| || | ||| | ||||||||||| Sbjct: 10435401 atcaaaaccatccagctgattaagcaactccaaca 10435367
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 163 bits (82), Expect = 8e-37 Identities = 130/146 (89%) Strand = Plus / Plus Query: 262 accttcatcctgcgctctcttaaggcaagcaatccagcttcagtacaaatagctttgata 321 |||||||| | ||| ||||| || ||||| | ||||||||||||||| || ||||||||| Sbjct: 29382899 accttcattcggcgttctctcaaagcaagaagtccagcttcagtacatattgctttgata 29382958 Query: 322 tcagcaccagaaaactcatctttggtcatcacaaactcttctaggttcacatcttctgcc 381 |||||||| ||||||||||| |||||||| ||||||||||| ||||||||||| |||||| Sbjct: 29382959 tcagcaccggaaaactcatccttggtcatgacaaactcttccaggttcacatcatctgcc 29383018 Query: 382 aatgtcatcttagcagtgtgtatctg 407 ||||||||||||| ||||||||||| Sbjct: 29383019 aatgtcatcttagatgtgtgtatctg 29383044 Score = 123 bits (62), Expect = 7e-25 Identities = 80/86 (93%) Strand = Plus / Plus Query: 180 tcacatgtacagcccctccggtacaccttccttcttcttgaacattaccttctctttggc 239 ||||||||| || |||||||| ||||||||||||||||||||||| |||||||| || || Sbjct: 29382508 tcacatgtaaagaccctccggcacaccttccttcttcttgaacatcaccttctcctttgc 29382567 Query: 240 cttcttgaagtcagcatgtgtcacct 265 |||||||||||||||||||||||||| Sbjct: 29382568 cttcttgaagtcagcatgtgtcacct 29382593 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 424 gttttaatatctggcaatggaaattcaatctt 455 |||||||||||||||| |||||||| ||||| Sbjct: 29383153 gttttaatatctggcagaggaaattctatctt 29383184
>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0034A04 Length = 151263 Score = 163 bits (82), Expect = 8e-37 Identities = 130/146 (89%) Strand = Plus / Plus Query: 262 accttcatcctgcgctctcttaaggcaagcaatccagcttcagtacaaatagctttgata 321 |||||||| | ||| ||||| || ||||| | ||||||||||||||| || ||||||||| Sbjct: 45821 accttcattcggcgttctctcaaagcaagaagtccagcttcagtacatattgctttgata 45880 Query: 322 tcagcaccagaaaactcatctttggtcatcacaaactcttctaggttcacatcttctgcc 381 |||||||| ||||||||||| |||||||| ||||||||||| ||||||||||| |||||| Sbjct: 45881 tcagcaccggaaaactcatccttggtcatgacaaactcttccaggttcacatcatctgcc 45940 Query: 382 aatgtcatcttagcagtgtgtatctg 407 ||||||||||||| ||||||||||| Sbjct: 45941 aatgtcatcttagatgtgtgtatctg 45966 Score = 123 bits (62), Expect = 7e-25 Identities = 80/86 (93%) Strand = Plus / Plus Query: 180 tcacatgtacagcccctccggtacaccttccttcttcttgaacattaccttctctttggc 239 ||||||||| || |||||||| ||||||||||||||||||||||| |||||||| || || Sbjct: 45430 tcacatgtaaagaccctccggcacaccttccttcttcttgaacatcaccttctcctttgc 45489 Query: 240 cttcttgaagtcagcatgtgtcacct 265 |||||||||||||||||||||||||| Sbjct: 45490 cttcttgaagtcagcatgtgtcacct 45515 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 424 gttttaatatctggcaatggaaattcaatctt 455 |||||||||||||||| |||||||| ||||| Sbjct: 46075 gttttaatatctggcagaggaaattctatctt 46106
>emb|BX819727.1|CNS0A8HI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS20ZD02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1465 Score = 135 bits (68), Expect = 2e-28 Identities = 222/272 (81%), Gaps = 1/272 (0%) Strand = Plus / Minus Query: 205 ccttccttcttcttgaac-attaccttctctttggccttcttgaagtcagcatgtgtcac 263 ||||| |||||||||||| || |||||||| || |||||||||||||| |||| ||||| Sbjct: 1349 ccttctttcttcttgaactataaccttctccttcgccttcttgaagtccacatgcgtcac 1290 Query: 264 cttcatcctgcgctctcttaaggcaagcaatccagcttcagtacaaatagctttgatatc 323 ||||||| |||||||| | ||||||| |||||||| || || || || || ||||| Sbjct: 1289 tttcatccgacgctctctaagagcaagcagaccagcttctgtgcatattgcctttatatc 1230 Query: 324 agcaccagaaaactcatctttggtcatcacaaactcttctaggttcacatcttctgccaa 383 ||| || || ||||| ||||| ||||| ||||||||||||| |||||||||||| ||| Sbjct: 1229 agctcctgagaactcgtcttttgtcattacaaactcttctaagttcacatcttcattcaa 1170 Query: 384 tgtcatcttagcagtgtgtatctgaaagatacgccgtcgtgttttaatatctggcaatgg 443 |||||||| | ||||||||||| |||||||| | || |||||| |||||||| | || Sbjct: 1169 agtcatctttgatgtgtgtatctggaagatacgtcttcttgttttgatatctggaagagg 1110 Query: 444 aaattcaatctttctgtctattcggcctggtc 475 ||||| || || ||||| || |||||||||| Sbjct: 1109 gaattcgattttcctgtcgatccggcctggtc 1078
>ref|NM_119048.2| Arabidopsis thaliana RPT2A; ATPase AT4G29040 (RPT2A) mRNA, complete cds Length = 1574 Score = 121 bits (61), Expect = 3e-24 Identities = 190/233 (81%) Strand = Plus / Minus Query: 205 ccttccttcttcttgaacattaccttctctttggccttcttgaagtcagcatgtgtcacc 264 ||||| |||||||||||||| |||||||| || || |||||||| |||| |||||||||| Sbjct: 1373 ccttctttcttcttgaacataaccttctcctttgctttcttgaaatcaggatgtgtcacc 1314 Query: 265 ttcatcctgcgctctcttaaggcaagcaatccagcttcagtacaaatagctttgatatca 324 ||||| | ||||| || | || || | ||||| ||||| || ||||| || |||||| Sbjct: 1313 ttcatacgacgctccctgagagctagtagaccagcctcagtgcatatagcctttatatca 1254 Query: 325 gcaccagaaaactcatctttggtcatcacaaactcttctaggttcacatcttctgccaat 384 || || || ||||| ||||| ||||||||||||||||| ||||| |||||||| | | Sbjct: 1253 gctcctgagaactcgtctttcgtcatcacaaactcttcgaggtttacatcttccgagaga 1194 Query: 385 gtcatcttagcagtgtgtatctgaaagatacgccgtcgtgttttaatatctgg 437 |||||||| | ||||||||||| |||||||| | || |||||| |||||||| Sbjct: 1193 gtcatcttcgatgtgtgtatctggaagatacgtcttcttgttttgatatctgg 1141
>gb|AY034975.1| Arabidopsis thaliana putative 26S proteasome subunit 4 (At4g29040) mRNA, complete cds Length = 1590 Score = 121 bits (61), Expect = 3e-24 Identities = 190/233 (81%) Strand = Plus / Minus Query: 205 ccttccttcttcttgaacattaccttctctttggccttcttgaagtcagcatgtgtcacc 264 ||||| |||||||||||||| |||||||| || || |||||||| |||| |||||||||| Sbjct: 1373 ccttctttcttcttgaacataaccttctcctttgctttcttgaaatcaggatgtgtcacc 1314 Query: 265 ttcatcctgcgctctcttaaggcaagcaatccagcttcagtacaaatagctttgatatca 324 ||||| | ||||| || | || || | ||||| ||||| || ||||| || |||||| Sbjct: 1313 ttcatacgacgctccctgagagctagtagaccagcctcagtgcatatagcctttatatca 1254 Query: 325 gcaccagaaaactcatctttggtcatcacaaactcttctaggttcacatcttctgccaat 384 || || || ||||| ||||| ||||||||||||||||| ||||| |||||||| | | Sbjct: 1253 gctcctgagaactcgtctttcgtcatcacaaactcttcgaggtttacatcttccgagaga 1194 Query: 385 gtcatcttagcagtgtgtatctgaaagatacgccgtcgtgttttaatatctgg 437 |||||||| | ||||||||||| |||||||| | || |||||| |||||||| Sbjct: 1193 gtcatcttcgatgtgtgtatctggaagatacgtcttcttgttttgatatctgg 1141
>dbj|AB161192.1| Arabidopsis thaliana HLR mRNA for 26S proteasome subunit AtRPT2a, complete cds Length = 1574 Score = 121 bits (61), Expect = 3e-24 Identities = 190/233 (81%) Strand = Plus / Minus Query: 205 ccttccttcttcttgaacattaccttctctttggccttcttgaagtcagcatgtgtcacc 264 ||||| |||||||||||||| |||||||| || || |||||||| |||| |||||||||| Sbjct: 1373 ccttctttcttcttgaacataaccttctcctttgctttcttgaaatcaggatgtgtcacc 1314 Query: 265 ttcatcctgcgctctcttaaggcaagcaatccagcttcagtacaaatagctttgatatca 324 ||||| | ||||| || | || || | ||||| ||||| || ||||| || |||||| Sbjct: 1313 ttcatacgacgctccctgagagctagtagaccagcctcagtgcatatagcctttatatca 1254 Query: 325 gcaccagaaaactcatctttggtcatcacaaactcttctaggttcacatcttctgccaat 384 || || || ||||| ||||| ||||||||||||||||| ||||| |||||||| | | Sbjct: 1253 gctcctgagaactcgtctttcgtcatcacaaactcttcgaggtttacatcttccgagaga 1194 Query: 385 gtcatcttagcagtgtgtatctgaaagatacgccgtcgtgttttaatatctgg 437 |||||||| | ||||||||||| |||||||| | || |||||| |||||||| Sbjct: 1193 gtcatcttcgatgtgtgtatctggaagatacgtcttcttgttttgatatctgg 1141
>gb|AF123391.1|AF123391 Arabidopsis thaliana 26S proteasome AAA-ATPase subunit RPT2a (RPT2a) mRNA, complete cds Length = 1568 Score = 121 bits (61), Expect = 3e-24 Identities = 190/233 (81%) Strand = Plus / Minus Query: 205 ccttccttcttcttgaacattaccttctctttggccttcttgaagtcagcatgtgtcacc 264 ||||| |||||||||||||| |||||||| || || |||||||| |||| |||||||||| Sbjct: 1372 ccttctttcttcttgaacataaccttctcctttgctttcttgaaatcaggatgtgtcacc 1313 Query: 265 ttcatcctgcgctctcttaaggcaagcaatccagcttcagtacaaatagctttgatatca 324 ||||| | ||||| || | || || | ||||| ||||| || ||||| || |||||| Sbjct: 1312 ttcatacgacgctccctgagagctagtagaccagcctcagtgcatatagcctttatatca 1253 Query: 325 gcaccagaaaactcatctttggtcatcacaaactcttctaggttcacatcttctgccaat 384 || || || ||||| ||||| ||||||||||||||||| ||||| |||||||| | | Sbjct: 1252 gctcctgagaactcgtctttcgtcatcacaaactcttcgaggtttacatcttccgagaga 1193 Query: 385 gtcatcttagcagtgtgtatctgaaagatacgccgtcgtgttttaatatctgg 437 |||||||| | ||||||||||| |||||||| | || |||||| |||||||| Sbjct: 1192 gtcatcttcgatgtgtgtatctggaagatacgtcttcttgttttgatatctgg 1140
>gb|AF432345.1| Tortula ruralis 26S proteasome regulatory subunit IV (RPT2) mRNA, complete cds Length = 1845 Score = 107 bits (54), Expect = 4e-20 Identities = 141/170 (82%) Strand = Plus / Minus Query: 205 ccttccttcttcttgaacattaccttctctttggccttcttgaagtcagcatgtgtcacc 264 |||||||||||||| |||| || ||||||||||||||||| || ||||| || |||||| Sbjct: 1502 ccttccttcttcttatacatcactttctctttggccttcttaaaatcagcgtgcgtcacc 1443 Query: 265 ttcatcctgcgctctcttaaggcaagcaatccagcttcagtacaaatagctttgatatca 324 ||||| | |||||| | || ||||| | ||||| |||||||| ||||||||||| || Sbjct: 1442 ttcatacggcgctcacgcaatgcaagaagaccagcctcagtacatatagctttgatgtcg 1383 Query: 325 gcaccagaaaactcatctttggtcatcacaaactcttctaggttcacatc 374 |||||||| || ||||| || ||||||||||| || || ||||| ||||| Sbjct: 1382 gcaccagagaattcatccttagtcatcacaaattcctccaggtttacatc 1333
>emb|AJ293726.1|BNA293726 Brassica napus homologue of AT4g29030 gene, homologue of SPH gene, homologue of AT4g29040 gene (pseudogene) and homologue of AT4g29060 gene (pseudogene, partial) Length = 15378 Score = 87.7 bits (44), Expect = 4e-14 Identities = 95/112 (84%) Strand = Plus / Minus Query: 295 ccagcttcagtacaaatagctttgatatcagcaccagaaaactcatctttggtcatcaca 354 ||||| ||||| |||||||| || ||||||||||| || ||||| ||||| ||||||||| Sbjct: 12657 ccagcctcagtgcaaatagcctttatatcagcacctgagaactcgtcttttgtcatcaca 12598 Query: 355 aactcttctaggttcacatcttctgccaatgtcatcttagcagtgtgtatct 406 |||||||| | |||||||||||| | | ||||||||| | |||||||||| Sbjct: 12597 aactcttccaagttcacatcttccgagagtgtcatctttgatgtgtgtatct 12546 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Minus Query: 205 ccttccttcttcttgaacattaccttctctttggccttcttgaagtcagcatgtgtcacc 264 ||||| |||||||||||||| |||||||| || || |||||||| || | ||| |||||| Sbjct: 12811 ccttctttcttcttgaacataaccttctcctttgctttcttgaaatccggatgcgtcacc 12752 Query: 265 t 265 | Sbjct: 12751 t 12751
>gb|AC006081.4| Arabidopsis thaliana chromosome 2 clone T2G17 map mi148, complete sequence Length = 97814 Score = 83.8 bits (42), Expect = 6e-13 Identities = 117/142 (82%) Strand = Plus / Plus Query: 265 ttcatcctgcgctctcttaaggcaagcaatccagcttcagtacaaatagctttgatatca 324 ||||||| |||||||| | ||||||| |||||||| || || || || || |||||| Sbjct: 24073 ttcatccgacgctctctaagagcaagcagaccagcttctgtgcatattgcctttatatca 24132 Query: 325 gcaccagaaaactcatctttggtcatcacaaactcttctaggttcacatcttctgccaat 384 || || || ||||| ||||| ||||| ||||||||||||| |||||||||||| ||||| Sbjct: 24133 gctcctgagaactcgtcttttgtcattacaaactcttctaagttcacatcttcagccaaa 24192 Query: 385 gtcatcttagcagtgtgtatct 406 |||||||| | |||||||||| Sbjct: 24193 gtcatctttgatgtgtgtatct 24214 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 180 tcacatgtacagcccctccggtacaccttccttcttcttgaacattaccttctctttggc 239 ||||||||| || || || || || ||||| |||||||||||||| |||||||| || || Sbjct: 23895 tcacatgtaaagaccttcaggaactccttctttcttcttgaacataaccttctccttcgc 23954 Query: 240 cttcttgaagtcagcatgtgtcacct 265 |||||||||||| |||| ||||||| Sbjct: 23955 cttcttgaagtccacatgcgtcacct 23980
>emb|AJ291500.1|BNA291500 Brassica napus homologue of SPH gene, AT4g29040 gene and AT4g29100 gene, clone SI13 Length = 14775 Score = 79.8 bits (40), Expect = 9e-12 Identities = 79/92 (85%) Strand = Plus / Minus Query: 286 gcaagcaatccagcttcagtacaaatagctttgatatcagcaccagaaaactcatctttg 345 ||||||| ||||| ||||| |||||||| || |||||||| || || ||||| ||||| Sbjct: 4051 gcaagcagaccagcctcagtgcaaatagcctttatatcagctcctgagaactcgtctttt 3992 Query: 346 gtcatcacaaactcttctaggttcacatcttc 377 ||||||||||||||||| | |||||||||||| Sbjct: 3991 gtcatcacaaactcttccaagttcacatcttc 3960
>ref|XM_641634.1| Dictyostelium discoideum hypothetical protein (DDB0202018), partial mRNA Length = 1320 Score = 77.8 bits (39), Expect = 4e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 295 ccagcttcagtacaaatagctttgatatcagcaccagaaaactcatctttggtcatcaca 354 |||| ||||||||| || ||||||||||||||||| || || |||||||| | ||| ||| Sbjct: 1205 ccagattcagtacagatggctttgatatcagcaccggataaatcatctttagacataaca 1146 Query: 355 aactcttctaggttcacatcttc 377 |||||||| ||||| |||||||| Sbjct: 1145 aactcttcaaggttaacatcttc 1123
>gb|AC161749.3| Medicago truncatula chromosome 7 BAC clone mth2-182g1, complete sequence Length = 47909 Score = 73.8 bits (37), Expect = 6e-10 Identities = 93/113 (82%), Gaps = 1/113 (0%) Strand = Plus / Plus Query: 442 ggaaattcaatctttctgtctattcggcctggtcnaagcaaagctgnntcaaggctctca 501 |||||||||||||| ||||||||||| ||||||| |||| ||||| || ||||| ||| Sbjct: 37263 ggaaattcaatcttcctgtctattcgacctggtcttagcagagctggatcgaggctttca 37322 Query: 502 atgcngtttgttgctanaataaccttttacatntnctnttgaatcaaaaccat 554 || | ||| ||||| | ||||| |||| |||| | || | ||||||||||||| Sbjct: 37323 attctgttggttgcgagaataa-ctttaacatctcctctagaatcaaaaccat 37374
>gb|AC150776.2| Medicago truncatula chromosome 7 BAC clone mte1-45n16, complete sequence Length = 107886 Score = 73.8 bits (37), Expect = 6e-10 Identities = 93/113 (82%), Gaps = 1/113 (0%) Strand = Plus / Plus Query: 442 ggaaattcaatctttctgtctattcggcctggtcnaagcaaagctgnntcaaggctctca 501 |||||||||||||| ||||||||||| ||||||| |||| ||||| || ||||| ||| Sbjct: 8421 ggaaattcaatcttcctgtctattcgacctggtcttagcagagctggatcgaggctttca 8480 Query: 502 atgcngtttgttgctanaataaccttttacatntnctnttgaatcaaaaccat 554 || | ||| ||||| | ||||| |||| |||| | || | ||||||||||||| Sbjct: 8481 attctgttggttgcgagaataa-ctttaacatctcctctagaatcaaaaccat 8532
>emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 70 Length = 198429 Score = 69.9 bits (35), Expect = 9e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 295 ccagcttcagtacaaatagctttgatatcagcaccagaaaactcatctttggtcatcaca 354 ||||| ||||| || ||||| || |||||||| || || ||||| ||||| ||||||||| Sbjct: 42243 ccagcctcagtgcatatagcctttatatcagctcctgagaactcgtctttcgtcatcaca 42184 Query: 355 aactcttctaggttcacatcttc 377 |||||||| ||||| |||||||| Sbjct: 42183 aactcttcgaggtttacatcttc 42161 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 205 ccttccttcttcttgaacattaccttctctttggccttcttgaagtcagcatgtgtcacc 264 ||||| |||||||||||||| |||||||| || || |||||||| |||| |||||||||| Sbjct: 42441 ccttctttcttcttgaacataaccttctcctttgctttcttgaaatcaggatgtgtcacc 42382 Query: 265 t 265 | Sbjct: 42381 t 42381
>emb|AL078469.2|ATF25O24 Arabidopsis thaliana DNA chromosome 4, BAC clone F25O24 (ESSA project) Length = 97714 Score = 69.9 bits (35), Expect = 9e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 295 ccagcttcagtacaaatagctttgatatcagcaccagaaaactcatctttggtcatcaca 354 ||||| ||||| || ||||| || |||||||| || || ||||| ||||| ||||||||| Sbjct: 67274 ccagcctcagtgcatatagcctttatatcagctcctgagaactcgtctttcgtcatcaca 67215 Query: 355 aactcttctaggttcacatcttc 377 |||||||| ||||| |||||||| Sbjct: 67214 aactcttcgaggtttacatcttc 67192 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 205 ccttccttcttcttgaacattaccttctctttggccttcttgaagtcagcatgtgtcacc 264 ||||| |||||||||||||| |||||||| || || |||||||| |||| |||||||||| Sbjct: 67472 ccttctttcttcttgaacataaccttctcctttgctttcttgaaatcaggatgtgtcacc 67413 Query: 265 t 265 | Sbjct: 67412 t 67412
>emb|AL078470.1|ATF19B15 Arabidopsis thaliana DNA chromosome 4, BAC clone F19B15 (ESSA project) Length = 101679 Score = 69.9 bits (35), Expect = 9e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 295 ccagcttcagtacaaatagctttgatatcagcaccagaaaactcatctttggtcatcaca 354 ||||| ||||| || ||||| || |||||||| || || ||||| ||||| ||||||||| Sbjct: 25770 ccagcctcagtgcatatagcctttatatcagctcctgagaactcgtctttcgtcatcaca 25711 Query: 355 aactcttctaggttcacatcttc 377 |||||||| ||||| |||||||| Sbjct: 25710 aactcttcgaggtttacatcttc 25688 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 205 ccttccttcttcttgaacattaccttctctttggccttcttgaagtcagcatgtgtcacc 264 ||||| |||||||||||||| |||||||| || || |||||||| |||| |||||||||| Sbjct: 25968 ccttctttcttcttgaacataaccttctcctttgctttcttgaaatcaggatgtgtcacc 25909 Query: 265 t 265 | Sbjct: 25908 t 25908
>ref|XM_721689.1| Plasmodium yoelii yoelii str. 17XNL 26S proteasome subunit 4 protein (PY00768) partial mRNA Length = 1344 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 298 gcttcagtacaaatagctttgatatcagcaccagaaaactcatctttggtcatcacaaac 357 ||||||||||| |||||||||||||| ||||| || || |||||||| | ||| ||||| Sbjct: 1226 gcttcagtacatatagctttgatatcggcaccggataattcatcttttgacattacaaat 1167 Query: 358 tcttctag 365 |||||||| Sbjct: 1166 tcttctag 1159
>ref|XM_736668.1| Plasmodium chabaudi chabaudi 26S proteasome regulatory subunit 4 (PC000434.02.0) partial mRNA Length = 882 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 298 gcttcagtacaaatagctttgatatcagcaccagaaaactcatctttggtcatcacaaac 357 ||||| ||||| |||||||||||||||||||| || || |||||||| | ||| ||||| Sbjct: 764 gcttccgtacatatagctttgatatcagcaccggataattcatcttttgacattacaaat 705 Query: 358 tcttctag 365 |||||||| Sbjct: 704 tcttctag 697
>gb|AE014830.1| Plasmodium falciparum 3D7 chromosome 10 section 2 of 7 of the complete sequence Length = 250029 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 294 tccagcttcagtacaaatagctttgatatcagcaccagaaaactcatctttggtcatcac 353 ||||||||| ||||| |||||||| ||||||||||| || || |||||||| | ||| || Sbjct: 97301 tccagcttctgtacatatagcttttatatcagcacctgataattcatcttttgacataac 97360 Query: 354 aaactcttcta 364 ||| ||||||| Sbjct: 97361 aaattcttcta 97371
>dbj|AK058808.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-C05, full insert sequence Length = 251 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 180 tcacatgtacagcccctccggtacaccttccttcttcttga 220 ||||||||| || |||||||| ||||||||||||||||||| Sbjct: 48 tcacatgtaaagaccctccggcacaccttccttcttcttga 8
>gb|AY809862.1| Schistosoma japonicum SJCHGC04980 protein mRNA, partial cds Length = 876 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 295 ccagcttcagtacaaatagctttgatatcagcaccagaaa 334 |||||||||||||||||||| ||||| |||||||| |||| Sbjct: 393 ccagcttcagtacaaatagccttgatgtcagcacctgaaa 354
>ref|XM_648741.1| Entamoeba histolytica HM-1:IMSS 26S proteasome subunit P45 family protein (71.t00014) partial mRNA Length = 1233 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 295 ccagcttcagtacaaatagctttgatatcagcaccagaaaactcatctttggtcatcaca 354 ||||| ||||||||||| ||||| |||||||| ||||| || |||||||| | ||| ||| Sbjct: 1118 ccagcctcagtacaaattgctttaatatcagctccagataaatcatcttttgacataaca 1059 Query: 355 aactcttc 362 || ||||| Sbjct: 1058 aattcttc 1051 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 424 gttttaatatctggcaatggaaattcaatctttctgtctattcggcctggtc 475 ||||| |||||||| |||||||||||||||||||| || |||| ||||||| Sbjct: 989 gttttgatatctggtaatggaaattcaatctttctatcaattcttcctggtc 938
>ref|XM_668241.1| Plasmodium berghei strain ANKA hypothetical protein (PB000156.02.0) partial mRNA Length = 408 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 295 ccagcttcagtacaaatagctttgatatcagcaccagaaaactcatctttggtcatcaca 354 |||||||| ||||| |||||||||||||| || || || || |||||||| | ||| ||| Sbjct: 293 ccagcttcggtacatatagctttgatatcggcgccggataattcatcttttgacattaca 234 Query: 355 aactcttctag 365 || |||||||| Sbjct: 233 aattcttctag 223
>ref|XM_457903.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0C05654g) partial mRNA Length = 1302 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 295 ccagcttcagtacaaatagctttgatatcagcaccagaaaactcatcttt 344 ||||| || ||||| ||||||||||||||||| ||||| || |||||||| Sbjct: 1187 ccagcctctgtacacatagctttgatatcagctccagataattcatcttt 1138
>emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces hansenii Length = 1592360 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 295 ccagcttcagtacaaatagctttgatatcagcaccagaaaactcatcttt 344 ||||| || ||||| ||||||||||||||||| ||||| || |||||||| Sbjct: 465514 ccagcctctgtacacatagctttgatatcagctccagataattcatcttt 465563
>gb|AE014851.1| Plasmodium falciparum 3D7 chromosome 12, section 8 of 9 of the complete sequence Length = 251762 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 277 tctcttaaggcaagcaatccagcttcagtacaaatagcttt 317 ||||||||||||| || ||||||||| ||||||| |||||| Sbjct: 243527 tctcttaaggcaaacattccagcttctgtacaaacagcttt 243567
>emb|X77914.1|PFTBPM P.falciparum TBP mRNA Length = 1786 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 277 tctcttaaggcaagcaatccagcttcagtacaaatagcttt 317 ||||||||||||| || ||||||||| ||||||| |||||| Sbjct: 1327 tctcttaaggcaaacattccagcttctgtacaaacagcttt 1287
>ref|XM_712719.1| Candida albicans SC5314 putative proteasome regulatory particle ATPase Rpt2p (CaO19_5440), mRNA Length = 1398 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 298 gcttcagtacaaatagctttgatatcagcacc 329 ||||| ||||| |||||||||||||||||||| Sbjct: 1208 gcttctgtacatatagctttgatatcagcacc 1177
>ref|XM_712625.1| Candida albicans SC5314 putative proteasome regulatory particle ATPase Rpt2p (CaO19_12895), mRNA Length = 1398 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 298 gcttcagtacaaatagctttgatatcagcacc 329 ||||| ||||| |||||||||||||||||||| Sbjct: 1208 gcttctgtacatatagctttgatatcagcacc 1177
>gb|AC008774.7| Homo sapiens chromosome 5 clone CTD-2018M7, complete sequence Length = 128781 Score = 48.1 bits (24), Expect = 0.032 Identities = 57/68 (83%) Strand = Plus / Plus Query: 277 tctcttaaggcaagcaatccagcttcagtacaaatagctttgatatcagcaccagaaaac 336 ||||||||||| | || |||||||| ||||| || || ||||| ||||||||||| || Sbjct: 42794 tctcttaaggccatcagaccagcttctgtacagattgccttgatgtcagcaccagagaag 42853 Query: 337 tcatcttt 344 |||||||| Sbjct: 42854 tcatcttt 42861
>gb|AC016638.9| Homo sapiens chromosome 5 clone RP11-365H8, complete sequence Length = 182823 Score = 48.1 bits (24), Expect = 0.032 Identities = 57/68 (83%) Strand = Plus / Minus Query: 277 tctcttaaggcaagcaatccagcttcagtacaaatagctttgatatcagcaccagaaaac 336 ||||||||||| | || |||||||| ||||| || || ||||| ||||||||||| || Sbjct: 38813 tctcttaaggccatcagaccagcttctgtacagattgccttgatgtcagcaccagagaag 38754 Query: 337 tcatcttt 344 |||||||| Sbjct: 38753 tcatcttt 38746
>emb|X73570.1|SCYTA2A S.cerevisiae YTA2 gene Length = 2016 Score = 46.1 bits (23), Expect = 0.13 Identities = 40/46 (86%) Strand = Plus / Minus Query: 442 ggaaattcaatctttctgtctattcggcctggtcnaagcaaagctg 487 ||||| ||||||||||| |||| || |||||||| |||||||||| Sbjct: 1693 ggaaactcaatctttctatctaatctgcctggtctcagcaaagctg 1648
>emb|BX538350.1| Cryptosporidium parvum chromosome 6, complete sequence; segment 1/4 Length = 287050 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 276 ctctcttaaggcaagcaatccagcttcagtacaaa 310 ||||||||| |||| || ||||||||||||||||| Sbjct: 99209 ctctcttaaagcaaacattccagcttcagtacaaa 99175
>gb|AC026956.20| Homo sapiens chromosome 15, clone RP11-597K23, complete sequence Length = 215520 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 82 ctcagaccattttaaacaaaaca 104 ||||||||||||||||||||||| Sbjct: 135347 ctcagaccattttaaacaaaaca 135369
>gb|U32274.1|SCD9509 Saccharomyces cerevisiae chromosome IV cosmids 9481, 9509, 9926, 9461, and lambda 3641 Length = 55359 Score = 46.1 bits (23), Expect = 0.13 Identities = 40/46 (86%) Strand = Plus / Minus Query: 442 ggaaattcaatctttctgtctattcggcctggtcnaagcaaagctg 487 ||||| ||||||||||| |||| || |||||||| |||||||||| Sbjct: 25442 ggaaactcaatctttctatctaatctgcctggtctcagcaaagctg 25397
>gb|U06229.1|SCU06229 Saccharomyces cerevisiae putative 26S protease subunit Ynt1p (YNT1) gene, complete cds Length = 1952 Score = 46.1 bits (23), Expect = 0.13 Identities = 40/46 (86%) Strand = Plus / Minus Query: 442 ggaaattcaatctttctgtctattcggcctggtcnaagcaaagctg 487 ||||| ||||||||||| |||| || |||||||| |||||||||| Sbjct: 1635 ggaaactcaatctttctatctaatctgcctggtctcagcaaagctg 1590
>ref|XM_511985.1| PREDICTED: Pan troglodytes LOC455243 (LOC455243), mRNA Length = 2355 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 190 agcccctccggtacaccttccttctt 215 |||||| ||||||||||||||||||| Sbjct: 811 agccccaccggtacaccttccttctt 786
>ref|XM_623524.1| PREDICTED: Apis mellifera similar to ENSANGP00000014769 (LOC551128), mRNA Length = 1818 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Minus Query: 295 ccagcttcagtacaaatagctttgatatcagcaccagaaaactcatcttt 344 |||||||||||||| ||||| || ||||| ||||| |||| |||||||| Sbjct: 1252 ccagcttcagtacatatagcctttatatctgcacctgaaagatcatcttt 1203 Score = 40.1 bits (20), Expect = 7.9 Identities = 35/40 (87%) Strand = Plus / Minus Query: 436 ggcaatggaaattcaatctttctgtctattcggcctggtc 475 |||||||||||||| || ||||| || ||||| ||||||| Sbjct: 1111 ggcaatggaaattctatttttctatcaattcgacctggtc 1072
>gb|AY103724.1| Zea mays PCO078380 mRNA sequence Length = 1655 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 441 tggaaattcaatctttctgtctattcggcc 470 ||||||||||||||| |||||||| ||||| Sbjct: 1035 tggaaattcaatcttcctgtctatgcggcc 1006
>emb|CR942586.2| Xenopus tropicalis finished cDNA, clone TGas066b09 Length = 1561 Score = 44.1 bits (22), Expect = 0.50 Identities = 85/106 (80%) Strand = Plus / Minus Query: 241 ttcttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagct 300 ||||||||||| ||| || |||||||| || ||||| ||||| || | || |||||| Sbjct: 1264 ttcttgaagtcttcattggtgaccttcattctacgctcccttaatgccatcagaccagct 1205 Query: 301 tcagtacaaatagctttgatatcagcaccagaaaactcatctttgg 346 ||||| |||||||| || ||||| || ||||| | |||||||||| Sbjct: 1204 tcagtgcaaatagcctttatatctgctccagagaggtcatctttgg 1159
>ref|XM_510114.1| PREDICTED: Pan troglodytes similar to protease (prosome, macropain) 26S subunit, ATPase 1 (LOC453097), mRNA Length = 3270 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Minus Query: 244 ttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagcttca 303 |||||||| ||| ||| || ||||| || || ||||||||||| | || |||||||| Sbjct: 3035 ttgaagtcttcatttgttactttcattctacgttctcttaaggccatcagaccagcttct 2976 Query: 304 gtacaaatagctttgatatcagcaccaga 332 ||||| || || ||||| ||||||||||| Sbjct: 2975 gtacagattgccttgatgtcagcaccaga 2947
>gb|BC073818.1| Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 1, mRNA (cDNA clone MGC:88853 IMAGE:5456334), complete cds Length = 1565 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Minus Query: 244 ttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagcttca 303 |||||||| ||| ||| || ||||| || || ||||||||||| | || |||||||| Sbjct: 1265 ttgaagtcttcatttgttactttcattctacgttctcttaaggccatcagaccagcttct 1206 Query: 304 gtacaaatagctttgatatcagcaccaga 332 ||||| || || ||||| ||||||||||| Sbjct: 1205 gtacagattgccttgatgtcagcaccaga 1177
>gb|BC016368.1| Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 1, mRNA (cDNA clone MGC:24583 IMAGE:4133348), complete cds Length = 1590 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Minus Query: 244 ttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagcttca 303 |||||||| ||| ||| || ||||| || || ||||||||||| | || |||||||| Sbjct: 1287 ttgaagtcttcatttgttactttcattctacgttctcttaaggccatcagaccagcttct 1228 Query: 304 gtacaaatagctttgatatcagcaccaga 332 ||||| || || ||||| ||||||||||| Sbjct: 1227 gtacagattgccttgatgtcagcaccaga 1199
>gb|BC000512.2| Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 1, mRNA (cDNA clone MGC:8541 IMAGE:2822718), complete cds Length = 1604 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Minus Query: 244 ttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagcttca 303 |||||||| ||| ||| || ||||| || || ||||||||||| | || |||||||| Sbjct: 1293 ttgaagtcttcatttgttactttcattctacgttctcttaaggccatcagaccagcttct 1234 Query: 304 gtacaaatagctttgatatcagcaccaga 332 ||||| || || ||||| ||||||||||| Sbjct: 1233 gtacagattgccttgatgtcagcaccaga 1205
>ref|XM_735956.1| Plasmodium chabaudi chabaudi tat-binding protein (PC000520.02.0) partial mRNA Length = 636 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 277 tctcttaaggcaagcaatccagcttcagtacaaatagcttt 317 |||||||| |||| || |||||||||||||||| |||||| Sbjct: 533 tctcttaaagcaaacataccagcttcagtacaaacagcttt 493
>gb|BC021001.1| Homo sapiens cDNA clone IMAGE:3839998, **** WARNING: chimeric clone **** Length = 2938 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Plus Query: 244 ttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagcttca 303 |||||||| ||| ||| || ||||| || || ||||||||||| | || |||||||| Sbjct: 1316 ttgaagtcttcatttgttactttcattctacgttctcttaaggccatcagaccagcttct 1375 Query: 304 gtacaaatagctttgatatcagcaccaga 332 ||||| || || ||||| ||||||||||| Sbjct: 1376 gtacagattgccttgatgtcagcaccaga 1404
>ref|NM_002802.2| Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 1 (PSMC1), mRNA Length = 1586 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Minus Query: 244 ttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagcttca 303 |||||||| ||| ||| || ||||| || || ||||||||||| | || |||||||| Sbjct: 1307 ttgaagtcttcatttgttactttcattctacgttctcttaaggccatcagaccagcttct 1248 Query: 304 gtacaaatagctttgatatcagcaccaga 332 ||||| || || ||||| ||||||||||| Sbjct: 1247 gtacagattgccttgatgtcagcaccaga 1219
>ref|XM_788370.1| PREDICTED: Strongylocentrotus purpuratus similar to lysyl-tRNA synthetase (LOC588700), mRNA Length = 1800 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 227 ccttctctttggccttcttga 247 ||||||||||||||||||||| Sbjct: 151 ccttctctttggccttcttga 131
>gb|BT009826.1| Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 1 mRNA, complete cds Length = 1323 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Minus Query: 244 ttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagcttca 303 |||||||| ||| ||| || ||||| || || ||||||||||| | || |||||||| Sbjct: 1259 ttgaagtcttcatttgttactttcattctacgttctcttaaggccatcagaccagcttct 1200 Query: 304 gtacaaatagctttgatatcagcaccaga 332 ||||| || || ||||| ||||||||||| Sbjct: 1199 gtacagattgccttgatgtcagcaccaga 1171
>gb|BC067741.1| Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 1, mRNA (cDNA clone MGC:86994 IMAGE:5264945), complete cds Length = 1577 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Minus Query: 244 ttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagcttca 303 |||||||| ||| ||| || ||||| || || ||||||||||| | || |||||||| Sbjct: 1280 ttgaagtcttcatttgttactttcattctacgttctcttaaggccatcagaccagcttct 1221 Query: 304 gtacaaatagctttgatatcagcaccaga 332 ||||| || || ||||| ||||||||||| Sbjct: 1220 gtacagattgccttgatgtcagcaccaga 1192
>emb|AJ010592.2|GTAJ10592 Guillardia theta DNA for complete sequence of nucleomorph chromosome 2 Length = 180915 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 296 cagcttcagtacaaatagctttgatatcagcaccaga 332 |||||||||| |||| ||||| |||||||||||||| Sbjct: 99676 cagcttcagtgcaaaatgcttttatatcagcaccaga 99712
>dbj|AK124201.1| Homo sapiens cDNA FLJ42207 fis, clone THYMU2036207, highly similar to Mus musculus protease (prosome, macropain) 26S subunit, ATPase 1 (Psmc1) Length = 2248 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Minus Query: 244 ttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagcttca 303 |||||||| ||| ||| || ||||| || || ||||||||||| | || |||||||| Sbjct: 1967 ttgaagtcttcatttgttactttcattctacgttctcttaaggccatcagaccagcttct 1908 Query: 304 gtacaaatagctttgatatcagcaccaga 332 ||||| || || ||||| ||||||||||| Sbjct: 1907 gtacagattgccttgatgtcagcaccaga 1879
>emb|CR620708.1| full-length cDNA clone CS0DF001YL06 of Fetal brain of Homo sapiens (human) Length = 1362 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Minus Query: 244 ttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagcttca 303 |||||||| ||| ||| || ||||| || || ||||||||||| | || |||||||| Sbjct: 1182 ttgaagtcttcatttgttactttcattctacgttctcttaaggccatcagaccagcttct 1123 Query: 304 gtacaaatagctttgatatcagcaccaga 332 ||||| || || ||||| ||||||||||| Sbjct: 1122 gtacagattgccttgatgtcagcaccaga 1094
>emb|CR614875.1| full-length cDNA clone CS0DF036YN10 of Fetal brain of Homo sapiens (human) Length = 1498 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Minus Query: 244 ttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagcttca 303 |||||||| ||| ||| || ||||| || || ||||||||||| | || |||||||| Sbjct: 1277 ttgaagtcttcatttgttactttcattctacgttctcttaaggccatcagaccagcttct 1218 Query: 304 gtacaaatagctttgatatcagcaccaga 332 ||||| || || ||||| ||||||||||| Sbjct: 1217 gtacagattgccttgatgtcagcaccaga 1189
>emb|CR612999.1| full-length cDNA clone CS0DA002YA20 of Neuroblastoma of Homo sapiens (human) Length = 1544 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Minus Query: 244 ttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagcttca 303 |||||||| ||| ||| || ||||| || || ||||||||||| | || |||||||| Sbjct: 1279 ttgaagtcttcatttgttactttcattctacgttctcttaaggccatcagaccagcttct 1220 Query: 304 gtacaaatagctttgatatcagcaccaga 332 ||||| || || ||||| ||||||||||| Sbjct: 1219 gtacagattgccttgatgtcagcaccaga 1191
>emb|CR607057.1| full-length cDNA clone CS0DA004YA22 of Neuroblastoma of Homo sapiens (human) Length = 1499 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Minus Query: 244 ttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagcttca 303 |||||||| ||| ||| || ||||| || || ||||||||||| | || |||||||| Sbjct: 1257 ttgaagtcttcatttgttactttcattctacgttctcttaaggccatcagaccagcttct 1198 Query: 304 gtacaaatagctttgatatcagcaccaga 332 ||||| || || ||||| ||||||||||| Sbjct: 1197 gtacagattgccttgatgtcagcaccaga 1169
>emb|CR606549.1| full-length cDNA clone CS0DA010YK18 of Neuroblastoma of Homo sapiens (human) Length = 1530 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Minus Query: 244 ttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagcttca 303 |||||||| ||| ||| || ||||| || || ||||||||||| | || |||||||| Sbjct: 1279 ttgaagtcttcatttgttactttcattctacgttctcttaaggccatcagaccagcttct 1220 Query: 304 gtacaaatagctttgatatcagcaccaga 332 ||||| || || ||||| ||||||||||| Sbjct: 1219 gtacagattgccttgatgtcagcaccaga 1191
>emb|CR603948.1| full-length cDNA clone CS0DJ011YA20 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1485 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Minus Query: 244 ttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagcttca 303 |||||||| ||| ||| || ||||| || || ||||||||||| | || |||||||| Sbjct: 1257 ttgaagtcttcatttgttactttcattctacgttctcttaaggccatcagaccagcttct 1198 Query: 304 gtacaaatagctttgatatcagcaccaga 332 ||||| || || ||||| ||||||||||| Sbjct: 1197 gtacagattgccttgatgtcagcaccaga 1169
>emb|CR601231.1| full-length cDNA clone CS0DE006YF19 of Placenta of Homo sapiens (human) Length = 1514 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Minus Query: 244 ttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagcttca 303 |||||||| ||| ||| || ||||| || || ||||||||||| | || |||||||| Sbjct: 1257 ttgaagtcttcatttgttactttcattctacgttctcttaaggccatcagaccagcttct 1198 Query: 304 gtacaaatagctttgatatcagcaccaga 332 ||||| || || ||||| ||||||||||| Sbjct: 1197 gtacagattgccttgatgtcagcaccaga 1169
>emb|CR599996.1| full-length cDNA clone CS0DI024YK20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1509 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Minus Query: 244 ttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagcttca 303 |||||||| ||| ||| || ||||| || || ||||||||||| | || |||||||| Sbjct: 1257 ttgaagtcttcatttgttactttcattctacgttctcttaaggccatcagaccagcttct 1198 Query: 304 gtacaaatagctttgatatcagcaccaga 332 ||||| || || ||||| ||||||||||| Sbjct: 1197 gtacagattgccttgatgtcagcaccaga 1169
>emb|CR596884.1| full-length cDNA clone CS0DA002YB04 of Neuroblastoma of Homo sapiens (human) Length = 542 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Minus Query: 244 ttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagcttca 303 |||||||| ||| ||| || ||||| || || ||||||||||| | || |||||||| Sbjct: 262 ttgaagtcttcatttgttactttcattctacgttctcttaaggccatcagaccagcttct 203 Query: 304 gtacaaatagctttgatatcagcaccaga 332 ||||| || || ||||| ||||||||||| Sbjct: 202 gtacagattgccttgatgtcagcaccaga 174
>emb|CR596533.1| full-length cDNA clone CS0DA012YH17 of Neuroblastoma of Homo sapiens (human) Length = 1531 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Minus Query: 244 ttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagcttca 303 |||||||| ||| ||| || ||||| || || ||||||||||| | || |||||||| Sbjct: 1257 ttgaagtcttcatttgttactttcattctacgttctcttaaggccatcagaccagcttct 1198 Query: 304 gtacaaatagctttgatatcagcaccaga 332 ||||| || || ||||| ||||||||||| Sbjct: 1197 gtacagattgccttgatgtcagcaccaga 1169
>emb|CR592984.1| full-length cDNA clone CS0DI065YE14 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1506 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Minus Query: 244 ttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagcttca 303 |||||||| ||| ||| || ||||| || || ||||||||||| | || |||||||| Sbjct: 1257 ttgaagtcttcatttgttactttcattctacgttctcttaaggccatcagaccagcttct 1198 Query: 304 gtacaaatagctttgatatcagcaccaga 332 ||||| || || ||||| ||||||||||| Sbjct: 1197 gtacagattgccttgatgtcagcaccaga 1169
>emb|CR591570.1| full-length cDNA clone CS0DE013YN23 of Placenta of Homo sapiens (human) Length = 1543 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Minus Query: 244 ttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagcttca 303 |||||||| ||| ||| || ||||| || || ||||||||||| | || |||||||| Sbjct: 1278 ttgaagtcttcatttgttactttcattctacgttctcttaaggccatcagaccagcttct 1219 Query: 304 gtacaaatagctttgatatcagcaccaga 332 ||||| || || ||||| ||||||||||| Sbjct: 1218 gtacagattgccttgatgtcagcaccaga 1190
>emb|CR590391.1| full-length cDNA clone CL0BB024ZA05 of Neuroblastoma of Homo sapiens (human) Length = 1561 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Minus Query: 244 ttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagcttca 303 |||||||| ||| ||| || ||||| || || ||||||||||| | || |||||||| Sbjct: 1279 ttgaagtcttcatttgttactttcattctacgttctcttaaggccatcagaccagcttct 1220 Query: 304 gtacaaatagctttgatatcagcaccaga 332 ||||| || || ||||| ||||||||||| Sbjct: 1219 gtacagattgccttgatgtcagcaccaga 1191
>gb|AC096922.2| Homo sapiens chromosome 3 clone RP11-436J20, complete sequence Length = 218652 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Plus Query: 244 ttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagcttca 303 |||||||| ||| ||| || ||||| || || ||||||||||| | || |||||||| Sbjct: 135192 ttgaagtcttcatttgttactttcattctacgttctcttaaggccatcagaccagcttct 135251 Query: 304 gtacaaatagctttgatatcagcaccaga 332 ||||| || || ||||| ||||||||||| Sbjct: 135252 gtacagattgccttgatgtcagcaccaga 135280
>ref|NG_001556.1| Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 1 pseudogene (PSMC1P) on chromosome 3 Length = 1758 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Minus Query: 244 ttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagcttca 303 |||||||| ||| ||| || ||||| || || ||||||||||| | || |||||||| Sbjct: 1379 ttgaagtcttcatttgttactttcattctacgttctcttaaggccatcagaccagcttct 1320 Query: 304 gtacaaatagctttgatatcagcaccaga 332 ||||| || || ||||| ||||||||||| Sbjct: 1319 gtacagattgccttgatgtcagcaccaga 1291
>dbj|AB169562.1| Macaca fascicularis brain cDNA, clone: QflA-13164, similar to human proteasome (prosome, macropain) 26S subunit, ATPase, 1(PSMC1), mRNA, RefSeq: NM_002802.2 Length = 1601 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Minus Query: 244 ttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagcttca 303 |||||||| ||| ||| || ||||| || || ||||||||||| | || |||||||| Sbjct: 1296 ttgaagtcttcatttgttactttcattctacgttctcttaaggccatcagaccagcttct 1237 Query: 304 gtacaaatagctttgatatcagcaccaga 332 ||||| || || ||||| ||||||||||| Sbjct: 1236 gtacagattgccttgatgtcagcaccaga 1208
>gb|AC093892.3| Homo sapiens BAC clone RP11-702L18 from 2, complete sequence Length = 111078 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 ttcttgaacattaccttctct 234 ||||||||||||||||||||| Sbjct: 652 ttcttgaacattaccttctct 632
>dbj|AK222668.1| Homo sapiens mRNA for proteasome 26S ATPase subunit 1 variant, clone: CBR03079 Length = 1520 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Minus Query: 244 ttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagcttca 303 |||||||| ||| ||| || ||||| || || ||||||||||| | || |||||||| Sbjct: 1275 ttgaagtcttcatttgttactttcattctacgttctcttaaggccatcagaccagcttct 1216 Query: 304 gtacaaatagctttgatatcagcaccaga 332 ||||| || || ||||| ||||||||||| Sbjct: 1215 gtacagattgccttgatgtcagcaccaga 1187
>gb|AY011124.1| Dactylis glomerata 26S proteasome RPT6a subunit (DGRPT6a) mRNA, complete cds Length = 1553 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 442 ggaaattcaatctttctgtctattcggcc 470 |||||||||||||| |||||||| ||||| Sbjct: 1113 ggaaattcaatcttcctgtctatgcggcc 1085
>gb|AC013718.6| Homo sapiens BAC clone RP11-116I17 from 2, complete sequence Length = 177855 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 ttcttgaacattaccttctct 234 ||||||||||||||||||||| Sbjct: 176506 ttcttgaacattaccttctct 176486
>gb|AY888761.1| Synthetic construct Homo sapiens clone FLH110001.01X proteasome 26S subunit 1 (PSMC1) mRNA, complete cds Length = 1323 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Minus Query: 244 ttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagcttca 303 |||||||| ||| ||| || ||||| || || ||||||||||| | || |||||||| Sbjct: 1259 ttgaagtcttcatttgttactttcattctacgttctcttaaggccatcagaccagcttct 1200 Query: 304 gtacaaatagctttgatatcagcaccaga 332 ||||| || || ||||| ||||||||||| Sbjct: 1199 gtacagattgccttgatgtcagcaccaga 1171
>gb|AY888760.1| Synthetic construct Homo sapiens clone FLH110000.01X proteasome 26S subunit 1 (PSMC1) mRNA, complete cds Length = 1323 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Minus Query: 244 ttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagcttca 303 |||||||| ||| ||| || ||||| || || ||||||||||| | || |||||||| Sbjct: 1259 ttgaagtcttcatttgttactttcattctacgttctcttaaggccatcagaccagcttct 1200 Query: 304 gtacaaatagctttgatatcagcaccaga 332 ||||| || || ||||| ||||||||||| Sbjct: 1199 gtacagattgccttgatgtcagcaccaga 1171
>gb|AY888759.1| Synthetic construct Homo sapiens clone FLH109996.01X proteasome 26S subunit 1 (PSMC1) mRNA, complete cds Length = 1323 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Minus Query: 244 ttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagcttca 303 |||||||| ||| ||| || ||||| || || ||||||||||| | || |||||||| Sbjct: 1259 ttgaagtcttcatttgttactttcattctacgttctcttaaggccatcagaccagcttct 1200 Query: 304 gtacaaatagctttgatatcagcaccaga 332 ||||| || || ||||| ||||||||||| Sbjct: 1199 gtacagattgccttgatgtcagcaccaga 1171
>gb|AC154235.2| Mus musculus BAC clone RP24-347C11 from 17, complete sequence Length = 214934 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 206 cttccttcttcttgaacatta 226 ||||||||||||||||||||| Sbjct: 29078 cttccttcttcttgaacatta 29058
>gb|BT020983.1| Bos taurus proteasome (prosome, macropain) 26S subunit, ATPase, 1 (PSMC1), mRNA, complete cds Length = 1534 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Minus Query: 244 ttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagcttca 303 |||||||| ||| ||| || ||||| ||||||||||| ||||| | || |||||||| Sbjct: 1282 ttgaagtcttcatttgttactttcattctgcgctctctcaaggccatcagaccagcttct 1223 Query: 304 gtacaaatagctttgatatcagcaccaga 332 ||||| || || ||||| || |||||||| Sbjct: 1222 gtacagattgccttgatgtcggcaccaga 1194
>emb|CT573084.4| Mouse DNA sequence from clone RP23-226G14 on chromosome 17, complete sequence Length = 221319 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 cttccttcttcttgaacatta 226 ||||||||||||||||||||| Sbjct: 108815 cttccttcttcttgaacatta 108835
>gb|BC018859.2| Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 1, mRNA (cDNA clone IMAGE:3141213) Length = 1559 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Minus Query: 244 ttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagcttca 303 |||||||| ||| ||| || ||||| || || ||||||||||| | || |||||||| Sbjct: 1260 ttgaagtcttcatttgttactttcattctacgttctcttaaggccatcagaccagcttct 1201 Query: 304 gtacaaatagctttgatatcagcaccaga 332 ||||| || || ||||| ||||||||||| Sbjct: 1200 gtacagattgccttgatgtcagcaccaga 1172
>ref|NM_001014855.1| Bos taurus proteasome 26S ATPase subunit 1 (PSMC1), mRNA Length = 1534 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Minus Query: 244 ttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagcttca 303 |||||||| ||| ||| || ||||| ||||||||||| ||||| | || |||||||| Sbjct: 1282 ttgaagtcttcatttgttactttcattctgcgctctctcaaggccatcagaccagcttct 1223 Query: 304 gtacaaatagctttgatatcagcaccaga 332 ||||| || || ||||| || |||||||| Sbjct: 1222 gtacagattgccttgatgtcggcaccaga 1194
>gb|L02426.1|HUM26SPSIV Human 26S protease (S4) regulatory subunit mRNA, complete cds Length = 1599 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Minus Query: 244 ttgaagtcagcatgtgtcaccttcatcctgcgctctcttaaggcaagcaatccagcttca 303 |||||||| ||| ||| || ||||| || || ||||||||||| | || |||||||| Sbjct: 1319 ttgaagtcttcatttgttactttcattctacgttctcttaaggccatcagaccagcttct 1260 Query: 304 gtacaaatagctttgatatcagcaccaga 332 ||||| || || ||||| ||||||||||| Sbjct: 1259 gtacagattgccttgatgtcagcaccaga 1231
>gb|AC150424.3| Branchiostoma floridae clone CH302-7J16, complete sequence Length = 154657 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 ttctctttggccttcttgaa 248 |||||||||||||||||||| Sbjct: 90244 ttctctttggccttcttgaa 90225
>gb|DQ214550.1| Taeniopygia guttata clone 0061P0013A02 26S ATPase complex subunit 4-like mRNA, complete sequence Length = 1532 Score = 40.1 bits (20), Expect = 7.9 Identities = 35/40 (87%) Strand = Plus / Minus Query: 291 caatccagcttcagtacaaatagctttgatatcagcacca 330 |||||||||||| |||||||| || || ||||| |||||| Sbjct: 1245 caatccagcttctgtacaaattgccttaatatctgcacca 1206
>gb|DQ214549.1| Taeniopygia guttata clone 0063P0013D05 26S ATPase complex subunit 4-like mRNA, complete sequence Length = 1542 Score = 40.1 bits (20), Expect = 7.9 Identities = 35/40 (87%) Strand = Plus / Minus Query: 291 caatccagcttcagtacaaatagctttgatatcagcacca 330 |||||||||||| |||||||| || || ||||| |||||| Sbjct: 1246 caatccagcttctgtacaaattgccttaatatctgcacca 1207
>gb|AF064859.1| Homo sapiens chromosome 21q22.3 PAC 141B3, complete sequence, containing ribosomal protein homologue pseudogene L23a Length = 122571 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 cagtgtgtatctgaaagata 414 |||||||||||||||||||| Sbjct: 9105 cagtgtgtatctgaaagata 9086
>gb|AC006467.13| Drosophila melanogaster clone BACR03L08, complete sequence Length = 170327 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 tgtgtatctgaaagatacgc 417 |||||||||||||||||||| Sbjct: 86552 tgtgtatctgaaagatacgc 86533
>gb|AC150553.1| Drosophila melanogaster clone BACR09H20, complete sequence Length = 179099 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 tgtgtatctgaaagatacgc 417 |||||||||||||||||||| Sbjct: 134427 tgtgtatctgaaagatacgc 134408
>ref|XM_716057.1| Candida albicans SC5314 putative ubiquitin ligase Tom1p (CaO19_8529), mRNA Length = 4887 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 ccagaaaactcatctttggt 347 |||||||||||||||||||| Sbjct: 1072 ccagaaaactcatctttggt 1091
>ref|XM_715937.1| Candida albicans SC5314 putative ubiquitin ligase Tom1p (CaO19_911), mRNA Length = 4887 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 ccagaaaactcatctttggt 347 |||||||||||||||||||| Sbjct: 1072 ccagaaaactcatctttggt 1091
>gb|AC132237.3| Mus musculus BAC clone RP24-501M9 from chromosome 12, complete sequence Length = 212186 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gtagaggcaaataaactcag 86 |||||||||||||||||||| Sbjct: 63194 gtagaggcaaataaactcag 63213
>ref|XM_823362.1| Trypanosoma brucei TREU927 proteasome regulatory ATPase subunit 2 (Tb11.02.1220) partial mRNA Length = 1314 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 295 ccagcttcagtacaaatagctttgatatcagc 326 ||||| || |||||||| |||||||||||||| Sbjct: 1199 ccagcctcggtacaaatggctttgatatcagc 1168
>ref|XM_723966.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY00110) partial mRNA Length = 1534 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 attttaaacaaaacacaaac 109 |||||||||||||||||||| Sbjct: 1508 attttaaacaaaacacaaac 1527
>gb|AC159647.2| Mus musculus BAC clone RP23-66A14 from chromosome 12, complete sequence Length = 213946 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 tgtataaagtttgggattgc 52 |||||||||||||||||||| Sbjct: 79438 tgtataaagtttgggattgc 79457
>emb|AL163278.2|HS21C078 Homo sapiens chromosome 21 segment HS21C078 Length = 340000 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 cagtgtgtatctgaaagata 414 |||||||||||||||||||| Sbjct: 250471 cagtgtgtatctgaaagata 250452
>emb|AL445433.14| Human DNA sequence from clone RP11-234N17 on chromosome 1 Contains the 5' end of the gene for a novel protein, part of a novel gene (FLJ38225) and a ribosomal protein L5 (RPL5) pseudogene, complete sequence Length = 138918 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 256 tgtgtcaccttcatcctgcgctctctta 283 |||| |||||||||||||| |||||||| Sbjct: 27586 tgtggcaccttcatcctgctctctctta 27613
>emb|AL161655.8| Human DNA sequence from clone RP11-116E13 on chromosome 20 Contains part of a novel gene, GSSs and STSs, complete sequence Length = 105191 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 ataaactcagaccattttaa 96 |||||||||||||||||||| Sbjct: 93056 ataaactcagaccattttaa 93037
>ref|XM_967889.1| PREDICTED: Tribolium castaneum similar to Nck-associated protein 5 (LOC661743), mRNA Length = 4103 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 aaacacaaactccaatcctccagt 123 |||| ||||||||||||||||||| Sbjct: 2132 aaactcaaactccaatcctccagt 2109
>gb|AE014249.1| Streptococcus agalactiae 2603V/R section 59 of 100 of the complete genome Length = 19826 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 aacattaccttctctttggc 239 |||||||||||||||||||| Sbjct: 11631 aacattaccttctctttggc 11612
>emb|BX321861.1| Nitrosomonas europaea ATCC 19718, complete genome; segment 6/10 Length = 298050 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 tgggattgctgaataaaacg 63 |||||||||||||||||||| Sbjct: 199453 tgggattgctgaataaaacg 199472
>dbj|AB236774.1| Trifolium pratense RNA for putative zinc dependent protease, complete cds, clone: C1597 Length = 2290 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 ttctctttggccttcttgaa 248 |||||||||||||||||||| Sbjct: 975 ttctctttggccttcttgaa 956
>gb|AC008627.7| Homo sapiens chromosome 5 clone CTB-160O22, complete sequence Length = 153553 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 205 ccttccttcttcttgaacattaccttct 232 ||||||||||||||||| |||| ||||| Sbjct: 55458 ccttccttcttcttgaatattagcttct 55485
>dbj|AK132903.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930506F05 product:unclassifiable, full insert sequence Length = 1211 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gtagaggcaaataaactcag 86 |||||||||||||||||||| Sbjct: 209 gtagaggcaaataaactcag 228
>gb|AC106807.2| Homo sapiens chromosome 5 clone RP11-513C4, complete sequence Length = 176040 Score = 40.1 bits (20), Expect = 7.9 Identities = 47/56 (83%) Strand = Plus / Plus Query: 277 tctcttaaggcaagcaatccagcttcagtacaaatagctttgatatcagcaccaga 332 ||||||||||| | || |||||||| ||||| || || ||||| ||||||||||| Sbjct: 4039 tctcttaaggccatcagaccagcttctgtacagattgccttgatgtcagcaccaga 4094
>ref|XM_936708.1| PREDICTED: Homo sapiens similar to peptidase (prosome, macropain) 26S subunit, ATPase 1 (LOC391817), mRNA Length = 396 Score = 40.1 bits (20), Expect = 7.9 Identities = 47/56 (83%) Strand = Plus / Minus Query: 277 tctcttaaggcaagcaatccagcttcagtacaaatagctttgatatcagcaccaga 332 ||||||||||| | || |||||||| ||||| || || ||||| ||||||||||| Sbjct: 329 tctcttaaggccatcagaccagcttctgtacagattgccttgatgtcagcaccaga 274
>ref|XM_373094.3| PREDICTED: Homo sapiens similar to peptidase (prosome, macropain) 26S subunit, ATPase 1 (LOC391817), mRNA Length = 396 Score = 40.1 bits (20), Expect = 7.9 Identities = 47/56 (83%) Strand = Plus / Minus Query: 277 tctcttaaggcaagcaatccagcttcagtacaaatagctttgatatcagcaccaga 332 ||||||||||| | || |||||||| ||||| || || ||||| ||||||||||| Sbjct: 329 tctcttaaggccatcagaccagcttctgtacagattgccttgatgtcagcaccaga 274
>gb|AF083031.2|AF083031 Guillardia theta nucleomorph chromosome 3, complete sequence Length = 174133 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 300 ttcagtacaaatagctttgatatcagcaccag 331 |||||||||||| ||||| |||||||| |||| Sbjct: 116851 ttcagtacaaattgcttttatatcagctccag 116820
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 ccttctctttggccttcttg 246 |||||||||||||||||||| Sbjct: 279236 ccttctctttggccttcttg 279255
>gb|AF064858.2|AF064858 Homo sapiens chromosome 21 clone BAC 28F9, map 21q22.3, complete sequence Length = 194769 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 cagtgtgtatctgaaagata 414 |||||||||||||||||||| Sbjct: 137743 cagtgtgtatctgaaagata 137724
>emb|AL935033.5| Zebrafish DNA sequence from clone CH211-160F23 in linkage group 17, complete sequence Length = 162648 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 tcagaccattttaaacaaaa 102 |||||||||||||||||||| Sbjct: 145426 tcagaccattttaaacaaaa 145445
>gb|AC008529.4|AC008529 Homo sapiens chromosome 5 clone CTC-475P15, complete sequence Length = 169557 Score = 40.1 bits (20), Expect = 7.9 Identities = 47/56 (83%) Strand = Plus / Minus Query: 277 tctcttaaggcaagcaatccagcttcagtacaaatagctttgatatcagcaccaga 332 ||||||||||| | || |||||||| ||||| || || ||||| ||||||||||| Sbjct: 54211 tctcttaaggccatcagaccagcttctgtacagattgccttgatgtcagcaccaga 54156
>dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome Length = 1738505 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tctttggccttcttgaagtc 251 |||||||||||||||||||| Sbjct: 1145591 tctttggccttcttgaagtc 1145572
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 cttccttcttcttgaacatt 225 |||||||||||||||||||| Sbjct: 4119763 cttccttcttcttgaacatt 4119782
>ref|XM_311185.2| Anopheles gambiae str. PEST ENSANGP00000001527 (ENSANGG00000001293), partial mRNA Length = 6525 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 cctccggtacaccttccttc 213 |||||||||||||||||||| Sbjct: 2368 cctccggtacaccttccttc 2349
>emb|BX005062.4| Zebrafish DNA sequence from clone CH211-95I5 in linkage group 19, complete sequence Length = 170213 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 ctcagaccattttaaacaaa 101 |||||||||||||||||||| Sbjct: 167849 ctcagaccattttaaacaaa 167868
>emb|AL954223.1| Pan troglodytes chromosome 22 clone PTB-187O16 map q21.2, complete sequence Length = 165877 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 cagtgtgtatctgaaagata 414 |||||||||||||||||||| Sbjct: 106490 cagtgtgtatctgaaagata 106471
>emb|AL954224.1|PT270D20 Pan troglodytes chromosome 22 BAC PTB-270D20, complete sequence Length = 192642 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 cagtgtgtatctgaaagata 414 |||||||||||||||||||| Sbjct: 4439 cagtgtgtatctgaaagata 4420
>gb|AE003781.5| Drosophila melanogaster chromosome 2L, section 80 of 83 of the complete sequence Length = 323775 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 tgtgtatctgaaagatacgc 417 |||||||||||||||||||| Sbjct: 300802 tgtgtatctgaaagatacgc 300783
>emb|CT027660.1| Medicago truncatula chromosome 5 clone mth4-7a11, COMPLETE SEQUENCE Length = 107624 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 accttccttcttcttgaaca 223 |||||||||||||||||||| Sbjct: 91969 accttccttcttcttgaaca 91988
>emb|AL929082.7| Zebrafish DNA sequence from clone CH211-113P18, complete sequence Length = 195316 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 cattttaaacaaaacacaaa 108 |||||||||||||||||||| Sbjct: 19011 cattttaaacaaaacacaaa 18992 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,323,880 Number of Sequences: 3902068 Number of extensions: 5323880 Number of successful extensions: 121878 Number of sequences better than 10.0: 143 Number of HSP's better than 10.0 without gapping: 143 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 121481 Number of HSP's gapped (non-prelim): 383 length of query: 578 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 555 effective length of database: 17,143,297,704 effective search space: 9514530225720 effective search space used: 9514530225720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
