| Clone Name | rbaal32l07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK105795.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-A02, full insert sequence Length = 1301 Score = 507 bits (256), Expect = e-140 Identities = 395/441 (89%), Gaps = 4/441 (0%) Strand = Plus / Minus Query: 180 aagtgcctaatatagagaagcctaattcagatattggctatcctctcttcgttgcagctc 239 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1197 aagtgcctaatatagagaagcctaattcagatattggctatcctctctt----gcagctc 1142 Query: 240 aattctcctcccttagatcggcatgcctttgggcacaatctggtcctttatccacatgta 299 | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1141 agttcatctcccttagatcggcatgcctttgggcacaatctggtcctttatccacatgta 1082 Query: 300 aataggcaccagaacatagtacgcagcacatatcgttcccatgaggaagcggaagaaaaa 359 |||||||||||||||||||| ||||||||||| |||||||||||||||||||||| || Sbjct: 1081 gataggcaccagaacatagtatgcagcacatattgttcccatgaggaagcggaagaggaa 1022 Query: 360 agtgataggattcacaggcttgctaacatcttcagccttcggaccaagctgtaaagggga 419 ||||||||||||||||| ||||| ||||| ||| |||| ||||||||||| |||||||| Sbjct: 1021 ggtgataggattcacaggtttgctgacatcctcaacctttggaccaagctgcaaagggga 962 Query: 420 gtccccactttctttcttgacaccagtcacggagcaccccatgatgaggccatgcctacg 479 ||| ||| |||| | ||||| || ||||| ||||| ||||| || ||||||||||| || Sbjct: 961 gtctccatgttctcttttgacgcccgtcacagagcatcccataatcaggccatgccttcg 902 Query: 480 gacaccacggtaccactttggtccaatcctcttgagctgaacatccttgaaccctgcctt 539 ||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 901 gacaccacggtaccattttggtccaatccttttgagcttgacatccttgaaccctgcctt 842 Query: 540 tgtgaaccaatcgatatactcctcttcagtggggaacagcatccacatatcggcgaaaaa 599 | ||||||| || |||||||||||||| | ||||| ||||||||||| || |||||||| Sbjct: 841 tttgaaccactcaatatactcctcttccttcgggaagagcatccacatgtcagcgaaaaa 782 Query: 600 gcgagacagccaaaatgttgg 620 |||||||||||| || ||||| Sbjct: 781 gcgagacagccagaaggttgg 761
>dbj|AK104295.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-F10, full insert sequence Length = 1311 Score = 507 bits (256), Expect = e-140 Identities = 395/441 (89%), Gaps = 4/441 (0%) Strand = Plus / Minus Query: 180 aagtgcctaatatagagaagcctaattcagatattggctatcctctcttcgttgcagctc 239 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1207 aagtgcctaatatagagaagcctaattcagatattggctatcctctctt----gcagctc 1152 Query: 240 aattctcctcccttagatcggcatgcctttgggcacaatctggtcctttatccacatgta 299 | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1151 agttcatctcccttagatcggcatgcctttgggcacaatctggtcctttatccacatgta 1092 Query: 300 aataggcaccagaacatagtacgcagcacatatcgttcccatgaggaagcggaagaaaaa 359 |||||||||||||||||||| ||||||||||| |||||||||||||||||||||| || Sbjct: 1091 gataggcaccagaacatagtatgcagcacatattgttcccatgaggaagcggaagaggaa 1032 Query: 360 agtgataggattcacaggcttgctaacatcttcagccttcggaccaagctgtaaagggga 419 ||||||||||||||||| ||||| ||||| ||| |||| ||||||||||| |||||||| Sbjct: 1031 ggtgataggattcacaggtttgctgacatcctcaacctttggaccaagctgcaaagggga 972 Query: 420 gtccccactttctttcttgacaccagtcacggagcaccccatgatgaggccatgcctacg 479 ||| ||| |||| | ||||| || ||||| ||||| ||||| || ||||||||||| || Sbjct: 971 gtctccatgttctcttttgacgcccgtcacagagcatcccataatcaggccatgccttcg 912 Query: 480 gacaccacggtaccactttggtccaatcctcttgagctgaacatccttgaaccctgcctt 539 ||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 911 gacaccacggtaccattttggtccaatccttttgagcttgacatccttgaaccctgcctt 852 Query: 540 tgtgaaccaatcgatatactcctcttcagtggggaacagcatccacatatcggcgaaaaa 599 | ||||||| || |||||||||||||| | ||||| ||||||||||| || |||||||| Sbjct: 851 tttgaaccactcaatatactcctcttccttcgggaagagcatccacatgtcagcgaaaaa 792 Query: 600 gcgagacagccaaaatgttgg 620 |||||||||||| || ||||| Sbjct: 791 gcgagacagccagaaggttgg 771
>dbj|AK103998.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-C05, full insert sequence Length = 1366 Score = 507 bits (256), Expect = e-140 Identities = 395/441 (89%), Gaps = 4/441 (0%) Strand = Plus / Minus Query: 180 aagtgcctaatatagagaagcctaattcagatattggctatcctctcttcgttgcagctc 239 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1210 aagtgcctaatatagagaagcctaattcagatattggctatcctctctt----gcagctc 1155 Query: 240 aattctcctcccttagatcggcatgcctttgggcacaatctggtcctttatccacatgta 299 | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1154 agttcatctcccttagatcggcatgcctttgggcacaatctggtcctttatccacatgta 1095 Query: 300 aataggcaccagaacatagtacgcagcacatatcgttcccatgaggaagcggaagaaaaa 359 |||||||||||||||||||| ||||||||||| |||||||||||||||||||||| || Sbjct: 1094 gataggcaccagaacatagtatgcagcacatattgttcccatgaggaagcggaagaggaa 1035 Query: 360 agtgataggattcacaggcttgctaacatcttcagccttcggaccaagctgtaaagggga 419 ||||||||||||||||| ||||| ||||| ||| |||| ||||||||||| |||||||| Sbjct: 1034 ggtgataggattcacaggtttgctgacatcctcaacctttggaccaagctgcaaagggga 975 Query: 420 gtccccactttctttcttgacaccagtcacggagcaccccatgatgaggccatgcctacg 479 ||| ||| |||| | ||||| || ||||| ||||| ||||| || ||||||||||| || Sbjct: 974 gtctccatgttctcttttgacgcccgtcacagagcatcccataatcaggccatgccttcg 915 Query: 480 gacaccacggtaccactttggtccaatcctcttgagctgaacatccttgaaccctgcctt 539 ||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 914 gacaccacggtaccattttggtccaatccttttgagcttgacatccttgaaccctgcctt 855 Query: 540 tgtgaaccaatcgatatactcctcttcagtggggaacagcatccacatatcggcgaaaaa 599 | ||||||| || |||||||||||||| | ||||| ||||||||||| || |||||||| Sbjct: 854 tttgaaccactcaatatactcctcttccttcgggaagagcatccacatgtcagcgaaaaa 795 Query: 600 gcgagacagccaaaatgttgg 620 |||||||||||| || ||||| Sbjct: 794 gcgagacagccagaaggttgg 774
>dbj|AK072988.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150A08, full insert sequence Length = 1359 Score = 507 bits (256), Expect = e-140 Identities = 395/441 (89%), Gaps = 4/441 (0%) Strand = Plus / Minus Query: 180 aagtgcctaatatagagaagcctaattcagatattggctatcctctcttcgttgcagctc 239 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1205 aagtgcctaatatagagaagcctaattcagatattggctatcctctctt----gcagctc 1150 Query: 240 aattctcctcccttagatcggcatgcctttgggcacaatctggtcctttatccacatgta 299 | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1149 agttcatctcccttagatcggcatgcctttgggcacaatctggtcctttatccacatgta 1090 Query: 300 aataggcaccagaacatagtacgcagcacatatcgttcccatgaggaagcggaagaaaaa 359 |||||||||||||||||||| ||||||||||| |||||||||||||||||||||| || Sbjct: 1089 gataggcaccagaacatagtatgcagcacatattgttcccatgaggaagcggaagaggaa 1030 Query: 360 agtgataggattcacaggcttgctaacatcttcagccttcggaccaagctgtaaagggga 419 ||||||||||||||||| ||||| ||||| ||| |||| ||||||||||| |||||||| Sbjct: 1029 ggtgataggattcacaggtttgctgacatcctcaacctttggaccaagctgcaaagggga 970 Query: 420 gtccccactttctttcttgacaccagtcacggagcaccccatgatgaggccatgcctacg 479 ||| ||| |||| | ||||| || ||||| ||||| ||||| || ||||||||||| || Sbjct: 969 gtctccatgttctcttttgacgcccgtcacagagcatcccataatcaggccatgccttcg 910 Query: 480 gacaccacggtaccactttggtccaatcctcttgagctgaacatccttgaaccctgcctt 539 ||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 909 gacaccacggtaccattttggtccaatccttttgagcttgacatccttgaaccctgcctt 850 Query: 540 tgtgaaccaatcgatatactcctcttcagtggggaacagcatccacatatcggcgaaaaa 599 | ||||||| || |||||||||||||| | ||||| ||||||||||| || |||||||| Sbjct: 849 tttgaaccactcaatatactcctcttccttcgggaagagcatccacatgtcagcgaaaaa 790 Query: 600 gcgagacagccaaaatgttgg 620 |||||||||||| || ||||| Sbjct: 789 gcgagacagccagaaggttgg 769
>gb|AY104466.1| Zea mays PCO114350 mRNA sequence Length = 1005 Score = 343 bits (173), Expect = 4e-91 Identities = 366/428 (85%), Gaps = 3/428 (0%) Strand = Plus / Minus Query: 186 ctaatatagagaagcct--aattcagatattggctatcctctcttcgttgcagctcaatt 243 |||||||||||||| | |||||||| ||||||||||||||||| |||||||| ||| Sbjct: 848 ctaatatagagaagagtaaaattcagacgttggctatcctctcttccatgcagctc-att 790 Query: 244 ctcctcccttagatcggcatgcctttgggcacaatctggtcctttatccacatgtaaata 303 | | || || |||| ||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 789 cccttcactcagattggcatgccttttggcacgatctggtcctttatccacatgtaaata 730 Query: 304 ggcaccagaacatagtacgcagcacatatcgttcccatgaggaagcggaagaaaaaagtg 363 ||||||||||||||||| ||||||||||||||||| | |||||||||||||| || ||| Sbjct: 729 ggcaccagaacatagtaggcagcacatatcgttcctacgaggaagcggaagaggaaggtg 670 Query: 364 ataggattcacaggcttgctaacatcttcagccttcggaccaagctgtaaaggggagtcc 423 || |||||||| |||||||| ||||| || ||||| |||||||||| || || ||||| Sbjct: 669 atcggattcactggcttgctgacatcctccgccttgggaccaagctccaagggagagtca 610 Query: 424 ccactttctttcttgacaccagtcacggagcaccccatgatgaggccatgcctacggaca 483 || | ||| ||||||| || || |||||||| |||||||||||||||||||| |||||| Sbjct: 609 ccgcgctctctcttgacgcctgtgacggagcagcccatgatgaggccatgccttcggaca 550 Query: 484 ccacggtaccactttggtccaatcctcttgagctgaacatccttgaaccctgcctttgtg 543 || ||||||||||| |||||||||||||| |||| |||||| | ||||| ||||| || Sbjct: 549 ccgcggtaccacttcggtccaatcctcttcagcttgacatccctaaacccagccttcttg 490 Query: 544 aaccaatcgatatactcctcttcagtggggaacagcatccacatatcggcgaaaaagcga 603 ||||| ||||| ||||| || || ||||||| ||||||||||| |||||||| ||||| Sbjct: 489 aaccactcgatgtactcttcctccttggggaagagcatccacatgtcggcgaagaagcgg 430 Query: 604 gacagcca 611 |||||||| Sbjct: 429 gacagcca 422
>emb|X85103.1|OSPCRCD O.sativa mRNA for PCR clone D Length = 360 Score = 321 bits (162), Expect = 2e-84 Identities = 223/243 (91%), Gaps = 4/243 (1%) Strand = Plus / Minus Query: 180 aagtgcctaatatagagaagcctaattcagatattggctatcctctcttcgttgcagctc 239 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 258 aagtgcctaatatagagaagcctaattcagatattggctatcctctctt----gcagctc 203 Query: 240 aattctcctcccttagatcggcatgcctttgggcacaatctggtcctttatccacatgta 299 | ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 202 agttcatctcccttagatcggcatgcctgtgggcacaatctggtcctttatccacatgta 143 Query: 300 aataggcaccagaacatagtacgcagcacatatcgttcccatgaggaagcggaagaaaaa 359 |||||||||||||||||||| ||||||||||| |||||||||||||||||||||| || Sbjct: 142 gataggcaccagaacatagtatgcagcacatattgttcccatgaggaagcggaagaggaa 83 Query: 360 agtgataggattcacaggcttgctaacatcttcagccttcggaccaagctgtaaagggga 419 ||||||||||||||||| ||||| ||||| ||| |||| ||||||||||| |||||||| Sbjct: 82 ggtgataggattcacaggtttgctgacatcctcaacctttggaccaagctgcaaagggga 23 Query: 420 gtc 422 ||| Sbjct: 22 gtc 20
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 313 bits (158), Expect = 4e-82 Identities = 213/231 (92%), Gaps = 4/231 (1%) Strand = Plus / Plus Query: 180 aagtgcctaatatagagaagcctaattcagatattggctatcctctcttcgttgcagctc 239 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 26134892 aagtgcctaatatagagaagcctaattcagatattggctatcctctctt----gcagctc 26134947 Query: 240 aattctcctcccttagatcggcatgcctttgggcacaatctggtcctttatccacatgta 299 | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 26134948 agttcatctcccttagatcggcatgcctttgggcacaatctggtcctttatccacatgta 26135007 Query: 300 aataggcaccagaacatagtacgcagcacatatcgttcccatgaggaagcggaagaaaaa 359 |||||||||||||||||||| ||||||||||| |||||||||||||||||||||| || Sbjct: 26135008 gataggcaccagaacatagtatgcagcacatattgttcccatgaggaagcggaagaggaa 26135067 Query: 360 agtgataggattcacaggcttgctaacatcttcagccttcggaccaagctg 410 ||||||||||||||||| ||||| ||||| ||| |||| ||||||||||| Sbjct: 26135068 ggtgataggattcacaggtttgctgacatcctcaacctttggaccaagctg 26135118 Score = 200 bits (101), Expect = 4e-48 Identities = 182/209 (87%) Strand = Plus / Plus Query: 412 aaaggggagtccccactttctttcttgacaccagtcacggagcaccccatgatgaggcca 471 ||||||||||| ||| |||| | ||||| || ||||| ||||| ||||| || |||||| Sbjct: 26135905 aaaggggagtctccatgttctcttttgacgcccgtcacagagcatcccataatcaggcca 26135964 Query: 472 tgcctacggacaccacggtaccactttggtccaatcctcttgagctgaacatccttgaac 531 ||||| ||||||||||||||||| |||||||||||||| ||||||| |||||||||||| Sbjct: 26135965 tgccttcggacaccacggtaccattttggtccaatccttttgagcttgacatccttgaac 26136024 Query: 532 cctgcctttgtgaaccaatcgatatactcctcttcagtggggaacagcatccacatatcg 591 ||||||||| ||||||| || |||||||||||||| | ||||| ||||||||||| || Sbjct: 26136025 cctgcctttttgaaccactcaatatactcctcttccttcgggaagagcatccacatgtca 26136084 Query: 592 gcgaaaaagcgagacagccaaaatgttgg 620 |||||||||||||||||||| || ||||| Sbjct: 26136085 gcgaaaaagcgagacagccagaaggttgg 26136113
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 313 bits (158), Expect = 4e-82 Identities = 213/231 (92%), Gaps = 4/231 (1%) Strand = Plus / Plus Query: 180 aagtgcctaatatagagaagcctaattcagatattggctatcctctcttcgttgcagctc 239 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 26063068 aagtgcctaatatagagaagcctaattcagatattggctatcctctctt----gcagctc 26063123 Query: 240 aattctcctcccttagatcggcatgcctttgggcacaatctggtcctttatccacatgta 299 | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 26063124 agttcatctcccttagatcggcatgcctttgggcacaatctggtcctttatccacatgta 26063183 Query: 300 aataggcaccagaacatagtacgcagcacatatcgttcccatgaggaagcggaagaaaaa 359 |||||||||||||||||||| ||||||||||| |||||||||||||||||||||| || Sbjct: 26063184 gataggcaccagaacatagtatgcagcacatattgttcccatgaggaagcggaagaggaa 26063243 Query: 360 agtgataggattcacaggcttgctaacatcttcagccttcggaccaagctg 410 ||||||||||||||||| ||||| ||||| ||| |||| ||||||||||| Sbjct: 26063244 ggtgataggattcacaggtttgctgacatcctcaacctttggaccaagctg 26063294 Score = 200 bits (101), Expect = 4e-48 Identities = 182/209 (87%) Strand = Plus / Plus Query: 412 aaaggggagtccccactttctttcttgacaccagtcacggagcaccccatgatgaggcca 471 ||||||||||| ||| |||| | ||||| || ||||| ||||| ||||| || |||||| Sbjct: 26064081 aaaggggagtctccatgttctcttttgacgcccgtcacagagcatcccataatcaggcca 26064140 Query: 472 tgcctacggacaccacggtaccactttggtccaatcctcttgagctgaacatccttgaac 531 ||||| ||||||||||||||||| |||||||||||||| ||||||| |||||||||||| Sbjct: 26064141 tgccttcggacaccacggtaccattttggtccaatccttttgagcttgacatccttgaac 26064200 Query: 532 cctgcctttgtgaaccaatcgatatactcctcttcagtggggaacagcatccacatatcg 591 ||||||||| ||||||| || |||||||||||||| | ||||| ||||||||||| || Sbjct: 26064201 cctgcctttttgaaccactcaatatactcctcttccttcgggaagagcatccacatgtca 26064260 Query: 592 gcgaaaaagcgagacagccaaaatgttgg 620 |||||||||||||||||||| || ||||| Sbjct: 26064261 gcgaaaaagcgagacagccagaaggttgg 26064289
>emb|BX000457.2|CNS08CDE Oryza sativa chromosome 12, . BAC OJ1388_B05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144241 Score = 313 bits (158), Expect = 4e-82 Identities = 213/231 (92%), Gaps = 4/231 (1%) Strand = Plus / Plus Query: 180 aagtgcctaatatagagaagcctaattcagatattggctatcctctcttcgttgcagctc 239 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 25130 aagtgcctaatatagagaagcctaattcagatattggctatcctctctt----gcagctc 25185 Query: 240 aattctcctcccttagatcggcatgcctttgggcacaatctggtcctttatccacatgta 299 | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25186 agttcatctcccttagatcggcatgcctttgggcacaatctggtcctttatccacatgta 25245 Query: 300 aataggcaccagaacatagtacgcagcacatatcgttcccatgaggaagcggaagaaaaa 359 |||||||||||||||||||| ||||||||||| |||||||||||||||||||||| || Sbjct: 25246 gataggcaccagaacatagtatgcagcacatattgttcccatgaggaagcggaagaggaa 25305 Query: 360 agtgataggattcacaggcttgctaacatcttcagccttcggaccaagctg 410 ||||||||||||||||| ||||| ||||| ||| |||| ||||||||||| Sbjct: 25306 ggtgataggattcacaggtttgctgacatcctcaacctttggaccaagctg 25356 Score = 200 bits (101), Expect = 4e-48 Identities = 182/209 (87%) Strand = Plus / Plus Query: 412 aaaggggagtccccactttctttcttgacaccagtcacggagcaccccatgatgaggcca 471 ||||||||||| ||| |||| | ||||| || ||||| ||||| ||||| || |||||| Sbjct: 26143 aaaggggagtctccatgttctcttttgacgcccgtcacagagcatcccataatcaggcca 26202 Query: 472 tgcctacggacaccacggtaccactttggtccaatcctcttgagctgaacatccttgaac 531 ||||| ||||||||||||||||| |||||||||||||| ||||||| |||||||||||| Sbjct: 26203 tgccttcggacaccacggtaccattttggtccaatccttttgagcttgacatccttgaac 26262 Query: 532 cctgcctttgtgaaccaatcgatatactcctcttcagtggggaacagcatccacatatcg 591 ||||||||| ||||||| || |||||||||||||| | ||||| ||||||||||| || Sbjct: 26263 cctgcctttttgaaccactcaatatactcctcttccttcgggaagagcatccacatgtca 26322 Query: 592 gcgaaaaagcgagacagccaaaatgttgg 620 |||||||||||||||||||| || ||||| Sbjct: 26323 gcgaaaaagcgagacagccagaaggttgg 26351
>ref|XM_476850.1| Oryza sativa (japonica cultivar-group), mRNA Length = 993 Score = 176 bits (89), Expect = 6e-41 Identities = 287/353 (81%) Strand = Plus / Minus Query: 268 ttgggcacaatctggtcctttatccacatgtaaataggcaccagaacatagtacgcagca 327 ||||| |||||||| || || ||||||||||| ||||| ||||| ||||| || | ||| Sbjct: 977 ttggggacaatctgatctttcatccacatgtagataggtaccagcacataataagaagcg 918 Query: 328 catatcgttcccatgaggaagcggaagaaaaaagtgataggattcacaggcttgctaaca 387 || ||||| ||||||| ||||||||||| || |||| ||||||||| || || |||| Sbjct: 917 caaatcgtccccatgacgaagcggaagatgaaggtgaaaggattcactggtttctcaaca 858 Query: 388 tcttcagccttcggaccaagctgtaaaggggagtccccactttctttcttgacaccagtc 447 ||||||||||| ||||||||||| |||||||| || ||| | ||| || || ||| Sbjct: 857 tcttcagcctttggaccaagctgcaaaggggaatcgccagacgatcgcttcacgcctgtc 798 Query: 448 acggagcaccccatgatgaggccatgcctacggacaccacggtaccactttggtccaatc 507 || |||||||||||||| |||||||| | || ||||| |||||||| || || ||||| Sbjct: 797 acagagcaccccatgatcaggccatggcgtcgaacaccgcggtaccatttgggcccaatt 738 Query: 508 ctcttgagctgaacatccttgaaccctgcctttgtgaaccaatcgatatactcctcttca 567 ||||||| || ||||||| |||||||||||| |||||| || || ||||| ||||| Sbjct: 737 ctcttgatcttgacatcctggaaccctgccttctggaaccattctatgtactcttcttcc 678 Query: 568 gtggggaacagcatccacatatcggcgaaaaagcgagacagccaaaatgttgg 620 ||||||| ||||||||||| |||||||| ||||| ||||||||||| ||||| Sbjct: 677 ttggggaagagcatccacatgtcggcgaagaagcgtgacagccaaaaggttgg 625
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 119 bits (60), Expect = 1e-23 Identities = 147/176 (83%) Strand = Plus / Plus Query: 445 gtcacggagcaccccatgatgaggccatgcctacggacaccacggtaccactttggtcca 504 ||||| |||||||||||||| |||||||| | || ||||| |||||||| || || ||| Sbjct: 4214576 gtcacagagcaccccatgatcaggccatggcgtcgaacaccgcggtaccatttgggccca 4214635 Query: 505 atcctcttgagctgaacatccttgaaccctgcctttgtgaaccaatcgatatactcctct 564 || ||||||| || ||||||| |||||||||||| |||||| || || ||||| ||| Sbjct: 4214636 attctcttgatcttgacatcctggaaccctgccttctggaaccattctatgtactcttct 4214695 Query: 565 tcagtggggaacagcatccacatatcggcgaaaaagcgagacagccaaaatgttgg 620 || ||||||| ||||||||||| |||||||| ||||| ||||||||||| ||||| Sbjct: 4214696 tccttggggaagagcatccacatgtcggcgaagaagcgtgacagccaaaaggttgg 4214751 Score = 93.7 bits (47), Expect = 7e-16 Identities = 119/143 (83%) Strand = Plus / Plus Query: 268 ttgggcacaatctggtcctttatccacatgtaaataggcaccagaacatagtacgcagca 327 ||||| |||||||| || || ||||||||||| ||||| ||||| ||||| || | ||| Sbjct: 4214212 ttggggacaatctgatctttcatccacatgtagataggtaccagcacataataagaagcg 4214271 Query: 328 catatcgttcccatgaggaagcggaagaaaaaagtgataggattcacaggcttgctaaca 387 || ||||| ||||||| ||||||||||| || |||| ||||||||| || || |||| Sbjct: 4214272 caaatcgtccccatgacgaagcggaagatgaaggtgaaaggattcactggtttctcaaca 4214331 Query: 388 tcttcagccttcggaccaagctg 410 ||||||||||| ||||||||||| Sbjct: 4214332 tcttcagcctttggaccaagctg 4214354
>dbj|AP003826.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1361_E02 Length = 100168 Score = 119 bits (60), Expect = 1e-23 Identities = 147/176 (83%) Strand = Plus / Plus Query: 445 gtcacggagcaccccatgatgaggccatgcctacggacaccacggtaccactttggtcca 504 ||||| |||||||||||||| |||||||| | || ||||| |||||||| || || ||| Sbjct: 98198 gtcacagagcaccccatgatcaggccatggcgtcgaacaccgcggtaccatttgggccca 98257 Query: 505 atcctcttgagctgaacatccttgaaccctgcctttgtgaaccaatcgatatactcctct 564 || ||||||| || ||||||| |||||||||||| |||||| || || ||||| ||| Sbjct: 98258 attctcttgatcttgacatcctggaaccctgccttctggaaccattctatgtactcttct 98317 Query: 565 tcagtggggaacagcatccacatatcggcgaaaaagcgagacagccaaaatgttgg 620 || ||||||| ||||||||||| |||||||| ||||| ||||||||||| ||||| Sbjct: 98318 tccttggggaagagcatccacatgtcggcgaagaagcgtgacagccaaaaggttgg 98373 Score = 93.7 bits (47), Expect = 7e-16 Identities = 119/143 (83%) Strand = Plus / Plus Query: 268 ttgggcacaatctggtcctttatccacatgtaaataggcaccagaacatagtacgcagca 327 ||||| |||||||| || || ||||||||||| ||||| ||||| ||||| || | ||| Sbjct: 97834 ttggggacaatctgatctttcatccacatgtagataggtaccagcacataataagaagcg 97893 Query: 328 catatcgttcccatgaggaagcggaagaaaaaagtgataggattcacaggcttgctaaca 387 || ||||| ||||||| ||||||||||| || |||| ||||||||| || || |||| Sbjct: 97894 caaatcgtccccatgacgaagcggaagatgaaggtgaaaggattcactggtttctcaaca 97953 Query: 388 tcttcagccttcggaccaagctg 410 ||||||||||| ||||||||||| Sbjct: 97954 tcttcagcctttggaccaagctg 97976
>dbj|AP003800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1014_E09 Length = 184624 Score = 119 bits (60), Expect = 1e-23 Identities = 147/176 (83%) Strand = Plus / Plus Query: 445 gtcacggagcaccccatgatgaggccatgcctacggacaccacggtaccactttggtcca 504 ||||| |||||||||||||| |||||||| | || ||||| |||||||| || || ||| Sbjct: 35630 gtcacagagcaccccatgatcaggccatggcgtcgaacaccgcggtaccatttgggccca 35689 Query: 505 atcctcttgagctgaacatccttgaaccctgcctttgtgaaccaatcgatatactcctct 564 || ||||||| || ||||||| |||||||||||| |||||| || || ||||| ||| Sbjct: 35690 attctcttgatcttgacatcctggaaccctgccttctggaaccattctatgtactcttct 35749 Query: 565 tcagtggggaacagcatccacatatcggcgaaaaagcgagacagccaaaatgttgg 620 || ||||||| ||||||||||| |||||||| ||||| ||||||||||| ||||| Sbjct: 35750 tccttggggaagagcatccacatgtcggcgaagaagcgtgacagccaaaaggttgg 35805 Score = 93.7 bits (47), Expect = 7e-16 Identities = 119/143 (83%) Strand = Plus / Plus Query: 268 ttgggcacaatctggtcctttatccacatgtaaataggcaccagaacatagtacgcagca 327 ||||| |||||||| || || ||||||||||| ||||| ||||| ||||| || | ||| Sbjct: 35266 ttggggacaatctgatctttcatccacatgtagataggtaccagcacataataagaagcg 35325 Query: 328 catatcgttcccatgaggaagcggaagaaaaaagtgataggattcacaggcttgctaaca 387 || ||||| ||||||| ||||||||||| || |||| ||||||||| || || |||| Sbjct: 35326 caaatcgtccccatgacgaagcggaagatgaaggtgaaaggattcactggtttctcaaca 35385 Query: 388 tcttcagccttcggaccaagctg 410 ||||||||||| ||||||||||| Sbjct: 35386 tcttcagcctttggaccaagctg 35408
>gb|AY486009.1| Thlaspi caerulescens putative protein-like mRNA, partial sequence Length = 515 Score = 111 bits (56), Expect = 3e-21 Identities = 127/151 (84%) Strand = Plus / Plus Query: 436 ttgacaccagtcacggagcaccccatgatgaggccatgcctacggacaccacggtaccac 495 |||||||| || |||||||| |||||||| || || ||||| |||||||||||| ||||| Sbjct: 249 ttgacaccggtgacggagcaacccatgataagaccgtgcctgcggacaccacggnaccac 308 Query: 496 tttggtccaatcctcttgagctgaacatccttgaaccctgcctttgtgaaccaatcgata 555 || || ||||||| |||||||||||| |||||||| || || || |||||||||| || Sbjct: 309 ttggggccaatccgcttgagctgaacgtccttgaagccagctttcttgaaccaatcaatg 368 Query: 556 tactcctcttcagtggggaacagcatccaca 586 ||||| || || ||||||| |||||||||| Sbjct: 369 tactcttcctccttggggaaaagcatccaca 399
>emb|BX825577.1|CNS0A6FE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL45ZG06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1139 Score = 107 bits (54), Expect = 4e-20 Identities = 123/146 (84%) Strand = Plus / Minus Query: 439 acaccagtcacggagcaccccatgatgaggccatgcctacggacaccacggtaccacttt 498 ||||||||||| || || |||||||| ||||| ||||| || ||||||||||||||||| Sbjct: 828 acaccagtcacagaacatcccatgataaggccgtgcctgcgaacaccacggtaccacttg 769 Query: 499 ggtccaatcctcttgagctgaacatccttgaaccctgcctttgtgaaccaatcgatatac 558 || |||||||||||||||||||| |||||||| || || || ||||||| || || ||| Sbjct: 768 gggccaatcctcttgagctgaacgtccttgaaaccggcattcttgaaccactcaatgtac 709 Query: 559 tcctcttcagtggggaacagcatcca 584 || || || ||||||| |||||||| Sbjct: 708 tcttcctccttggggaagagcatcca 683 Score = 40.1 bits (20), Expect = 8.4 Identities = 35/40 (87%) Strand = Plus / Minus Query: 266 ctttgggcacaatctggtcctttatccacatgtaaatagg 305 ||||||| || ||||| ||||| ||||||||||| ||||| Sbjct: 1005 ctttgggaacgatctgatccttgatccacatgtagatagg 966
>gb|AC174291.12| Medicago truncatula clone mth2-58k14, complete sequence Length = 117627 Score = 101 bits (51), Expect = 3e-18 Identities = 147/179 (82%) Strand = Plus / Plus Query: 439 acaccagtcacggagcaccccatgatgaggccatgcctacggacaccacggtaccacttt 498 ||||||||||| || || ||||| || | |||||| | || |||||||| ||||| ||| Sbjct: 60600 acaccagtcaccgaacaacccataatcaagccatgacggcgaacaccacgataccatttt 60659 Query: 499 ggtccaatcctcttgagctgaacatccttgaaccctgcctttgtgaaccaatcgatatac 558 || |||||||| || ||||| |||||||| ||||||||||| || ||||| ||||||||| Sbjct: 60660 gggccaatcctttttagctggacatccttaaaccctgccttcgtaaaccactcgatatac 60719 Query: 559 tcctcttcagtggggaacagcatccacatatcggcgaaaaagcgagacagccaaaatgt 617 || ||||| | ||||| |||||||| | ||| ||||| || || |||| ||||||||| Sbjct: 60720 tcttcttctttagggaaaagcatccaaacatctgcgaagaaacgcgacaaccaaaatgt 60778
>ref|NM_116206.2| Arabidopsis thaliana APG1 (ALBINO OR PALE GREEN MUTANT 1); methyltransferase AT3G63410 (APG1) mRNA, complete cds Length = 1734 Score = 99.6 bits (50), Expect = 1e-17 Identities = 122/146 (83%) Strand = Plus / Minus Query: 439 acaccagtcacggagcaccccatgatgaggccatgcctacggacaccacggtaccacttt 498 |||||||| || || || |||||||| ||||| ||||| || ||||||||||||||||| Sbjct: 943 acaccagtgacagaacatcccatgataaggccgtgcctgcgaacaccacggtaccacttg 884 Query: 499 ggtccaatcctcttgagctgaacatccttgaaccctgcctttgtgaaccaatcgatatac 558 || |||||||||||||||||||| |||||||| || || || ||||||| || || ||| Sbjct: 883 gggccaatcctcttgagctgaacgtccttgaaaccggcattcttgaaccactcaatgtac 824 Query: 559 tcctcttcagtggggaacagcatcca 584 || || || ||||||| |||||||| Sbjct: 823 tcttcctccttggggaagagcatcca 798 Score = 40.1 bits (20), Expect = 8.4 Identities = 35/40 (87%) Strand = Plus / Minus Query: 266 ctttgggcacaatctggtcctttatccacatgtaaatagg 305 ||||||| || ||||| ||||| ||||||||||| ||||| Sbjct: 1119 ctttgggaacgatctgatccttgatccacatgtagatagg 1080
>emb|AL163818.1|ATMAA21 Arabidopsis thaliana DNA chromosome 3, P1 clone MAA21 (ESSA project) Length = 79153 Score = 99.6 bits (50), Expect = 1e-17 Identities = 122/146 (83%) Strand = Plus / Plus Query: 439 acaccagtcacggagcaccccatgatgaggccatgcctacggacaccacggtaccacttt 498 |||||||| || || || |||||||| ||||| ||||| || ||||||||||||||||| Sbjct: 38382 acaccagtgacagaacatcccatgataaggccgtgcctgcgaacaccacggtaccacttg 38441 Query: 499 ggtccaatcctcttgagctgaacatccttgaaccctgcctttgtgaaccaatcgatatac 558 || |||||||||||||||||||| |||||||| || || || ||||||| || || ||| Sbjct: 38442 gggccaatcctcttgagctgaacgtccttgaaaccggcattcttgaaccactcaatgtac 38501 Query: 559 tcctcttcagtggggaacagcatcca 584 || || || ||||||| |||||||| Sbjct: 38502 tcttcctccttggggaagagcatcca 38527 Score = 40.1 bits (20), Expect = 8.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 266 ctttgggcacaatctggtcctttatccacatgtaaatagg 305 ||||||| || ||||| ||||| ||||||||||| ||||| Sbjct: 38130 ctttgggaacgatctgatccttgatccacatgtagatagg 38169
>emb|BX823184.1|CNS0A772 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB95ZG10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1231 Score = 99.6 bits (50), Expect = 1e-17 Identities = 122/146 (83%) Strand = Plus / Minus Query: 439 acaccagtcacggagcaccccatgatgaggccatgcctacggacaccacggtaccacttt 498 |||||||| || || || |||||||| ||||| ||||| || ||||||||||||||||| Sbjct: 924 acaccagtgacagaacatcccatgataaggccgtgcctgcgaacaccacggtaccacttg 865 Query: 499 ggtccaatcctcttgagctgaacatccttgaaccctgcctttgtgaaccaatcgatatac 558 || |||||||||||||||||||| |||||||| || || || ||||||| || || ||| Sbjct: 864 gggccaatcctcttgagctgaacgtccttgaaaccggcattcttgaaccactcaatgtac 805 Query: 559 tcctcttcagtggggaacagcatcca 584 || || || ||||||| |||||||| Sbjct: 804 tcttcctccttggggaagagcatcca 779 Score = 40.1 bits (20), Expect = 8.4 Identities = 35/40 (87%) Strand = Plus / Minus Query: 266 ctttgggcacaatctggtcctttatccacatgtaaatagg 305 ||||||| || ||||| ||||| ||||||||||| ||||| Sbjct: 1100 ctttgggaacgatctgatccttgatccacatgtagatagg 1061
>emb|BX822388.1|CNS0A78A Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB33ZB11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1171 Score = 99.6 bits (50), Expect = 1e-17 Identities = 122/146 (83%) Strand = Plus / Minus Query: 439 acaccagtcacggagcaccccatgatgaggccatgcctacggacaccacggtaccacttt 498 |||||||| || || || |||||||| ||||| ||||| || ||||||||||||||||| Sbjct: 825 acaccagtgacagaacatcccatgataaggccgtgcctgcgaacaccacggtaccacttg 766 Query: 499 ggtccaatcctcttgagctgaacatccttgaaccctgcctttgtgaaccaatcgatatac 558 || |||||||||||||||||||| |||||||| || || || ||||||| || || ||| Sbjct: 765 gggccaatcctcttgagctgaacgtccttgaaaccggcattcttgaaccactcaatgtac 706 Query: 559 tcctcttcagtggggaacagcatcca 584 || || || ||||||| |||||||| Sbjct: 705 tcttcctccttggggaagagcatcca 680 Score = 40.1 bits (20), Expect = 8.4 Identities = 35/40 (87%) Strand = Plus / Minus Query: 266 ctttgggcacaatctggtcctttatccacatgtaaatagg 305 ||||||| || ||||| ||||| ||||||||||| ||||| Sbjct: 1001 ctttgggaacgatctgatccttgatccacatgtagatagg 962
>emb|BX822319.1|CNS0A73F Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB28ZG01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1210 Score = 99.6 bits (50), Expect = 1e-17 Identities = 122/146 (83%) Strand = Plus / Minus Query: 439 acaccagtcacggagcaccccatgatgaggccatgcctacggacaccacggtaccacttt 498 |||||||| || || || |||||||| ||||| ||||| || ||||||||||||||||| Sbjct: 900 acaccagtgacagaacatcccatgataaggccgtgcctgcgaacaccacggtaccacttg 841 Query: 499 ggtccaatcctcttgagctgaacatccttgaaccctgcctttgtgaaccaatcgatatac 558 || |||||||||||||||||||| |||||||| || || || ||||||| || || ||| Sbjct: 840 gggccaatcctcttgagctgaacgtccttgaaaccggcattcttgaaccactcaatgtac 781 Query: 559 tcctcttcagtggggaacagcatcca 584 || || || ||||||| |||||||| Sbjct: 780 tcttcctccttggggaagagcatcca 755
>emb|BX823904.1|CNS0A6LO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS90ZE02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1215 Score = 99.6 bits (50), Expect = 1e-17 Identities = 122/146 (83%) Strand = Plus / Minus Query: 439 acaccagtcacggagcaccccatgatgaggccatgcctacggacaccacggtaccacttt 498 |||||||| || || || |||||||| ||||| ||||| || ||||||||||||||||| Sbjct: 874 acaccagtgacagaacatcccatgataaggccgtgcctgcgaacaccacggtaccacttg 815 Query: 499 ggtccaatcctcttgagctgaacatccttgaaccctgcctttgtgaaccaatcgatatac 558 || |||||||||||||||||||| |||||||| || || || ||||||| || || ||| Sbjct: 814 gggccaatcctcttgagctgaacgtccttgaaaccggcattcttgaaccactcaatgtac 755 Query: 559 tcctcttcagtggggaacagcatcca 584 || || || ||||||| |||||||| Sbjct: 754 tcttcctccttggggaagagcatcca 729 Score = 40.1 bits (20), Expect = 8.4 Identities = 35/40 (87%) Strand = Plus / Minus Query: 266 ctttgggcacaatctggtcctttatccacatgtaaatagg 305 ||||||| || ||||| ||||| ||||||||||| ||||| Sbjct: 1050 ctttgggaacgatctgatccttgatccacatgtagatagg 1011
>dbj|AB054257.1| Arabidopsis thaliana mRNA for APG1, complete cds Length = 1017 Score = 99.6 bits (50), Expect = 1e-17 Identities = 122/146 (83%) Strand = Plus / Minus Query: 439 acaccagtcacggagcaccccatgatgaggccatgcctacggacaccacggtaccacttt 498 |||||||| || || || |||||||| ||||| ||||| || ||||||||||||||||| Sbjct: 827 acaccagtgacagaacatcccatgataaggccgtgcctgcgaacaccacggtaccacttg 768 Query: 499 ggtccaatcctcttgagctgaacatccttgaaccctgcctttgtgaaccaatcgatatac 558 || |||||||||||||||||||| |||||||| || || || ||||||| || || ||| Sbjct: 767 gggccaatcctcttgagctgaacgtccttgaaaccggcattcttgaaccactcaatgtac 708 Query: 559 tcctcttcagtggggaacagcatcca 584 || || || ||||||| |||||||| Sbjct: 707 tcttcctccttggggaagagcatcca 682 Score = 40.1 bits (20), Expect = 8.4 Identities = 35/40 (87%) Strand = Plus / Minus Query: 266 ctttgggcacaatctggtcctttatccacatgtaaatagg 305 ||||||| || ||||| ||||| ||||||||||| ||||| Sbjct: 1003 ctttgggaacgatctgatccttgatccacatgtagatagg 964
>gb|AY085864.1| Arabidopsis thaliana clone 19143 mRNA, complete sequence Length = 1169 Score = 91.7 bits (46), Expect = 3e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 457 cccatgatgaggccatgcctacggacaccacggtaccactttggtccaatcctcttgagc 516 |||||||| ||||| ||||| || ||||||||||||||||| || ||||||||||||||| Sbjct: 891 cccatgataaggccgtgcctgcgaacaccacggtaccacttggggccaatcctcttgagc 832 Query: 517 tgaacatccttgaa 530 ||||| |||||||| Sbjct: 831 tgaacgtccttgaa 818 Score = 40.1 bits (20), Expect = 8.4 Identities = 35/40 (87%) Strand = Plus / Minus Query: 266 ctttgggcacaatctggtcctttatccacatgtaaatagg 305 ||||||| || ||||| ||||| ||||||||||| ||||| Sbjct: 1085 ctttgggaacgatctgatccttgatccacatgtagatagg 1046
>emb|X56963.1|SO37KDPM Spinach mRNA for chloroplast 37kD inner envelope membrane protein Length = 1226 Score = 91.7 bits (46), Expect = 3e-15 Identities = 117/138 (84%), Gaps = 2/138 (1%) Strand = Plus / Minus Query: 484 ccacggtaccactttggtccaatcctcttgagctgaacatccttgaaccctgcctttgtg 543 |||||||||||||| || |||||||| || || ||||||||||| || ||||| ||| || Sbjct: 804 ccacggtaccacttagggccaatcctttttagttgaacatccttaaaacctgc-tttctg 746 Query: 544 aa-ccaatcgatatactcctcttcagtggggaacagcatccacatatcggcgaaaaagcg 602 || ||| ||||||||||| || || | ||||| |||||||||| ||| || || ||||| Sbjct: 745 aaaccattcgatatactcttcctcctttgggaagagcatccacacatccgcaaagaagcg 686 Query: 603 agacagccaaaatgttgg 620 |||||||||||||||||| Sbjct: 685 agacagccaaaatgttgg 668
>emb|BX823122.1|CNS0A7AV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB91ZE01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1212 Score = 87.7 bits (44), Expect = 4e-14 Identities = 107/128 (83%) Strand = Plus / Minus Query: 457 cccatgatgaggccatgcctacggacaccacggtaccactttggtccaatcctcttgagc 516 |||||||| ||||| ||||| || ||||||||||||||||| || ||||||||||||||| Sbjct: 890 cccatgataaggccgtgcctgcgaacaccacggtaccacttggggccaatcctcttgagc 831 Query: 517 tgaacatccttgaaccctgcctttgtgaaccaatcgatatactcctcttcagtggggaac 576 ||||| ||||| || || || || ||||||| || || ||||| || || ||||||| Sbjct: 830 tgaacgtccttaaaaccggcattcttgaaccactcaatgtactcttcctccttggggaag 771 Query: 577 agcatcca 584 |||||||| Sbjct: 770 agcatcca 763 Score = 40.1 bits (20), Expect = 8.4 Identities = 35/40 (87%) Strand = Plus / Minus Query: 266 ctttgggcacaatctggtcctttatccacatgtaaatagg 305 ||||||| || ||||| ||||| ||||||||||| ||||| Sbjct: 1085 ctttgggaacgatctgatccttgatccacatgtagatagg 1046
>emb|X94968.1|NTENVMEMP N.tabacum mRNA for 37kDa chloroplast inner envelope membrane polypeptide Length = 1355 Score = 85.7 bits (43), Expect = 2e-13 Identities = 118/143 (82%) Strand = Plus / Minus Query: 373 acaggcttgctaacatcttcagccttcggaccaagctgtaaaggggagtccccactttct 432 ||||||||||| ||||| ||| ||||||| || ||||| || || || |||||| | | Sbjct: 996 acaggcttgctcacatcctcaaccttcgggccgagctgcaacggagattccccaaaatat 937 Query: 433 ttcttgacaccagtcacggagcaccccatgatgaggccatgcctacggacaccacggtac 492 ||||||||||||||| || || |||||||| | |||||| | |||||||||||| ||| Sbjct: 936 ggcttgacaccagtcacagaacaacccatgatcaagccatggcgacggacaccacgatac 877 Query: 493 cactttggtccaatcctcttgag 515 || ||||| |||||||||||||| Sbjct: 876 cattttgggccaatcctcttgag 854
>gb|DQ229836.1| Helianthus annuus cultivar RHA280 MPBQ/MSBQ methyltransferase 1 (MT-1) gene, complete cds Length = 4517 Score = 67.9 bits (34), Expect = 4e-08 Identities = 145/182 (79%) Strand = Plus / Minus Query: 436 ttgacaccagtcacggagcaccccatgatgaggccatgcctacggacaccacggtaccac 495 |||||||| || || ||||| ||||| ||||| ||||| | |||||| ||||| ||||| Sbjct: 3550 ttgacacctgtaacagagcatcccataatgagaccatggcgacggaccccacgataccat 3491 Query: 496 tttggtccaatcctcttgagctgaacatccttgaaccctgcctttgtgaaccaatcgata 555 | ||| ||||||||||| | ||| ||||| || ||||| |||||| ||||| || ||| Sbjct: 3490 tgtgggccaatcctcttaatctgcacatctttaaaccccgccttttcaaaccattcaata 3431 Query: 556 tactcctcttcagtggggaacagcatccacatatcggcgaaaaagcgagacagccaaaat 615 || || ||||| | || |||| ||||||||| || || || || ||||||| ||||||| Sbjct: 3430 tattcttcttcctttggaaacaacatccacatgtctgcaaagaaacgagacaaccaaaat 3371 Query: 616 gt 617 || Sbjct: 3370 gt 3369 Score = 48.1 bits (24), Expect = 0.035 Identities = 48/56 (85%) Strand = Plus / Minus Query: 265 cctttgggcacaatctggtcctttatccacatgtaaataggcaccagaacatagta 320 ||||| ||||||||||||||||| | ||||||||| | ||| || || |||||||| Sbjct: 4230 cctttcggcacaatctggtccttgagccacatgtagacaggaactagtacatagta 4175
>gb|DQ229835.1| Helianthus annuus cultivar NMS373 MPBQ/MSBQ methyltransferase 1 (MT-1) gene, complete cds Length = 4517 Score = 67.9 bits (34), Expect = 4e-08 Identities = 145/182 (79%) Strand = Plus / Minus Query: 436 ttgacaccagtcacggagcaccccatgatgaggccatgcctacggacaccacggtaccac 495 |||||||| || || ||||| ||||| ||||| ||||| | |||||| ||||| ||||| Sbjct: 3550 ttgacacctgtaacagagcatcccataatgagaccatggcgacggaccccacgataccat 3491 Query: 496 tttggtccaatcctcttgagctgaacatccttgaaccctgcctttgtgaaccaatcgata 555 | ||| ||||||||||| | ||| ||||| || ||||| |||||| ||||| || ||| Sbjct: 3490 tgtgggccaatcctcttaatctgcacatctttaaaccccgccttttcaaaccattcaata 3431 Query: 556 tactcctcttcagtggggaacagcatccacatatcggcgaaaaagcgagacagccaaaat 615 || || ||||| | || |||| ||||||||| || || || || ||||||| ||||||| Sbjct: 3430 tattcttcttcctttggaaacaacatccacatgtctgcaaagaaacgagacaaccaaaat 3371 Query: 616 gt 617 || Sbjct: 3370 gt 3369 Score = 48.1 bits (24), Expect = 0.035 Identities = 48/56 (85%) Strand = Plus / Minus Query: 265 cctttgggcacaatctggtcctttatccacatgtaaataggcaccagaacatagta 320 ||||| ||||||||||||||||| | ||||||||| | ||| || || |||||||| Sbjct: 4230 cctttcggcacaatctggtccttgagccacatgtagacaggaactagtacatagta 4175
>gb|DQ229837.1| Helianthus annuus cultivar RHA801 MPBQ/MSBQ methyltransferase 1 (MT-1) gene, complete cds Length = 3752 Score = 61.9 bits (31), Expect = 2e-06 Identities = 142/179 (79%) Strand = Plus / Minus Query: 436 ttgacaccagtcacggagcaccccatgatgaggccatgcctacggacaccacggtaccac 495 ||||||||||| || ||||| ||||| ||||| || || | |||||| ||||| ||||| Sbjct: 2898 ttgacaccagtaacagagcatcccataatgagaccgtgacgacggaccccacgataccat 2839 Query: 496 tttggtccaatcctcttgagctgaacatccttgaaccctgcctttgtgaaccaatcgata 555 | ||| ||||||||||| | ||| ||||| || ||||| |||||| ||||| || ||| Sbjct: 2838 tgtgggccaatcctcttaatctgcacatctttaaaccccgccttttcaaaccactcaata 2779 Query: 556 tactcctcttcagtggggaacagcatccacatatcggcgaaaaagcgagacagccaaaa 614 || || ||||| | || |||| ||||||||| || || || || ||||||| |||||| Sbjct: 2778 tattcttcttcctttggaaacaacatccacatgtctgcaaagaaacgagacaaccaaaa 2720 Score = 48.1 bits (24), Expect = 0.035 Identities = 48/56 (85%) Strand = Plus / Minus Query: 265 cctttgggcacaatctggtcctttatccacatgtaaataggcaccagaacatagta 320 ||||| ||||||||||||||||| | ||||||||| | ||| || || |||||||| Sbjct: 3570 cctttcggcacaatctggtccttgagccacatgtagacaggaactagtacatagta 3515
>gb|DQ229839.1| Helianthus annuus cultivar LG24 gypsy-like retrotransposon, complete sequence; and nonfunctional MPBQ/MSBQ methyltransferase 1 (MT-1) gene, partial sequence Length = 9460 Score = 58.0 bits (29), Expect = 4e-05 Identities = 146/185 (78%) Strand = Plus / Minus Query: 436 ttgacaccagtcacggagcaccccatgatgaggccatgcctacggacaccacggtaccac 495 ||||||||||| || ||||| ||||| ||||| || || | |||||| ||||| ||||| Sbjct: 8060 ttgacaccagtaacagagcaacccataatgagaccgtggcgacggaccccacgataccat 8001 Query: 496 tttggtccaatcctcttgagctgaacatccttgaaccctgcctttgtgaaccaatcgata 555 | ||| ||||||||||| | || ||||| || ||||| |||||| ||||| || ||| Sbjct: 8000 tgtgggccaatcctcttaatcttcacatctttaaaccccgccttttcaaaccattcaata 7941 Query: 556 tactcctcttcagtggggaacagcatccacatatcggcgaaaaagcgagacagccaaaat 615 || || ||||| | || |||| ||||||||| || || || || ||||||| |||||| Sbjct: 7940 tattcttcttcctttggaaacaacatccacatgtctgcaaagaaacgagacaaccaaaac 7881 Query: 616 gttgg 620 ||||| Sbjct: 7880 gttgg 7876 Score = 48.1 bits (24), Expect = 0.035 Identities = 48/56 (85%) Strand = Plus / Minus Query: 265 cctttgggcacaatctggtcctttatccacatgtaaataggcaccagaacatagta 320 ||||| ||||||||||||||||| | ||||||||| | ||| || || |||||||| Sbjct: 8732 cctttcggcacaatctggtccttgagccacatgtagacaggaactagtacatagta 8677
>gb|DQ229838.1| Helianthus annuus cultivar R112 gypsy-like retrotransposon, complete sequence; and nonfunctional MPBQ/MSBQ methyltransferase 1 (MT-1) gene, partial sequence Length = 9460 Score = 58.0 bits (29), Expect = 4e-05 Identities = 146/185 (78%) Strand = Plus / Minus Query: 436 ttgacaccagtcacggagcaccccatgatgaggccatgcctacggacaccacggtaccac 495 ||||||||||| || ||||| ||||| ||||| || || | |||||| ||||| ||||| Sbjct: 8060 ttgacaccagtaacagagcaacccataatgagaccgtggcgacggaccccacgataccat 8001 Query: 496 tttggtccaatcctcttgagctgaacatccttgaaccctgcctttgtgaaccaatcgata 555 | ||| ||||||||||| | || ||||| || ||||| |||||| ||||| || ||| Sbjct: 8000 tgtgggccaatcctcttaatcttcacatctttaaaccccgccttttcaaaccattcaata 7941 Query: 556 tactcctcttcagtggggaacagcatccacatatcggcgaaaaagcgagacagccaaaat 615 || || ||||| | || |||| ||||||||| || || || || ||||||| |||||| Sbjct: 7940 tattcttcttcctttggaaacaacatccacatgtctgcaaagaaacgagacaaccaaaac 7881 Query: 616 gttgg 620 ||||| Sbjct: 7880 gttgg 7876 Score = 48.1 bits (24), Expect = 0.035 Identities = 48/56 (85%) Strand = Plus / Minus Query: 265 cctttgggcacaatctggtcctttatccacatgtaaataggcaccagaacatagta 320 ||||| ||||||||||||||||| | ||||||||| | ||| || || |||||||| Sbjct: 8732 cctttcggcacaatctggtccttgagccacatgtagacaggaactagtacatagta 8677
>gb|AY333781.1| Chlamydomonas reinhardtii MPBQ/MSBQ methyltransferase (VTE3) mRNA, complete cds; nuclear gene for chloroplast product Length = 1014 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 535 gcctttgtgaaccaatcgatatactcctcttcagtggggaacagcatccac 585 ||||| |||||||| ||||| ||||| || || |||||||||||||||||| Sbjct: 728 gccttggtgaaccactcgatgtactcttcctccgtggggaacagcatccac 678
>gb|DQ229844.1| Helianthus annuus cultivar RHA801 MPBQ/MSBQ methyltransferase 2 (MT-2) gene, complete cds Length = 3768 Score = 52.0 bits (26), Expect = 0.002 Identities = 119/150 (79%) Strand = Plus / Minus Query: 436 ttgacaccagtcacggagcaccccatgatgaggccatgcctacggacaccacggtaccac 495 |||||||| || || |||||||||||||| | ||||| | |||||| ||||| ||||| Sbjct: 2030 ttgacaccggtaacagagcaccccatgatcaaaccatggcgacggaccccacgataccat 1971 Query: 496 tttggtccaatcctcttgagctgaacatccttgaaccctgcctttgtgaaccaatcgata 555 ||||| ||||| ||||| | || ||||| || || || |||||||| ||||| || || Sbjct: 1970 tttgggccaattctcttaatcttcacatctttaaatccagcctttgtaaaccactcaatg 1911 Query: 556 tactcctcttcagtggggaacagcatccac 585 ||||| || || | ||||| ||||||||| Sbjct: 1910 tactcttcctctttcgggaaaagcatccac 1881 Score = 40.1 bits (20), Expect = 8.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 265 cctttgggcacaatctggtcctttatccacatgtaaataggcaccagaacatagta 320 ||||| || ||||| |||||||| | ||||||||||| ||| ||||| || ||||| Sbjct: 3588 ccttttggaacaatttggtccttgagccacatgtaaacagggaccaggacgtagta 3533
>gb|DQ229843.1| Helianthus annuus cultivar RHA280 MPBQ/MSBQ methyltransferase 2 (MT-2) gene, complete cds Length = 3780 Score = 52.0 bits (26), Expect = 0.002 Identities = 119/150 (79%) Strand = Plus / Minus Query: 436 ttgacaccagtcacggagcaccccatgatgaggccatgcctacggacaccacggtaccac 495 |||||||| || || |||||||||||||| | ||||| | |||||| ||||| ||||| Sbjct: 2030 ttgacaccggtaacagagcaccccatgatcaaaccatggcgacggaccccacgataccat 1971 Query: 496 tttggtccaatcctcttgagctgaacatccttgaaccctgcctttgtgaaccaatcgata 555 ||||| ||||| ||||| | || ||||| || || || |||||||| ||||| || || Sbjct: 1970 tttgggccaattctcttaatcttcacatctttaaatccagcctttgtaaaccactcaatg 1911 Query: 556 tactcctcttcagtggggaacagcatccac 585 ||||| || || | ||||| ||||||||| Sbjct: 1910 tactcttcctctttcgggaaaagcatccac 1881 Score = 40.1 bits (20), Expect = 8.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 265 cctttgggcacaatctggtcctttatccacatgtaaataggcaccagaacatagta 320 ||||| || ||||| |||||||| | ||||||||||| ||| ||||| || ||||| Sbjct: 3600 ccttttggaacaatttggtccttgagccacatgtaaacagggaccaggacgtagta 3545
>gb|DQ229842.1| Helianthus annuus cultivar LG24 MPBQ/MSBQ methyltransferase 2 (MT-2) gene, complete cds Length = 3312 Score = 52.0 bits (26), Expect = 0.002 Identities = 119/150 (79%) Strand = Plus / Minus Query: 436 ttgacaccagtcacggagcaccccatgatgaggccatgcctacggacaccacggtaccac 495 |||||||| || || |||||||||||||| | ||||| | |||||| ||||| ||||| Sbjct: 1644 ttgacaccggtaacagagcaccccatgatcaaaccatggcgacggaccccacgataccat 1585 Query: 496 tttggtccaatcctcttgagctgaacatccttgaaccctgcctttgtgaaccaatcgata 555 ||||| ||||| ||||| | || ||||| || || || |||||||| ||||| || || Sbjct: 1584 tttgggccaattctcttaatcttcacatctttaaatccagcctttgtaaaccactcaatg 1525 Query: 556 tactcctcttcagtggggaacagcatccac 585 ||||| || || | ||||| ||||||||| Sbjct: 1524 tactcttcctctttcgggaaaagcatccac 1495 Score = 40.1 bits (20), Expect = 8.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 265 cctttgggcacaatctggtcctttatccacatgtaaataggcaccagaacatagta 320 ||||| || ||||| |||||||| | ||||||||||| ||| ||||| || ||||| Sbjct: 3132 ccttttggaacaatttggtccttgagccacatgtaaacagggaccaggacgtagta 3077
>gb|DQ229841.1| Helianthus annuus cultivar R112 MPBQ/MSBQ methyltransferase 2 (MT-2) gene, complete cds Length = 3768 Score = 52.0 bits (26), Expect = 0.002 Identities = 119/150 (79%) Strand = Plus / Minus Query: 436 ttgacaccagtcacggagcaccccatgatgaggccatgcctacggacaccacggtaccac 495 |||||||| || || |||||||||||||| | ||||| | |||||| ||||| ||||| Sbjct: 2030 ttgacaccggtaacagagcaccccatgatcaaaccatggcgacggaccccacgataccat 1971 Query: 496 tttggtccaatcctcttgagctgaacatccttgaaccctgcctttgtgaaccaatcgata 555 ||||| ||||| ||||| | || ||||| || || || |||||||| ||||| || || Sbjct: 1970 tttgggccaattctcttaatcttcacatctttaaatccagcctttgtaaaccactcaatg 1911 Query: 556 tactcctcttcagtggggaacagcatccac 585 ||||| || || | ||||| ||||||||| Sbjct: 1910 tactcttcctctttcgggaaaagcatccac 1881 Score = 40.1 bits (20), Expect = 8.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 265 cctttgggcacaatctggtcctttatccacatgtaaataggcaccagaacatagta 320 ||||| || ||||| |||||||| | ||||||||||| ||| ||||| || ||||| Sbjct: 3588 ccttttggaacaatttggtccttgagccacatgtaaacagggaccaggacgtagta 3533
>gb|DQ229840.1| Helianthus annuus cultivar NMS373 MPBQ/MSBQ methyltransferase 2 (MT-2) gene, complete cds Length = 3768 Score = 52.0 bits (26), Expect = 0.002 Identities = 119/150 (79%) Strand = Plus / Minus Query: 436 ttgacaccagtcacggagcaccccatgatgaggccatgcctacggacaccacggtaccac 495 |||||||| || || |||||||||||||| | ||||| | |||||| ||||| ||||| Sbjct: 2030 ttgacaccggtaacagagcaccccatgatcaaaccatggcgacggaccccacgataccat 1971 Query: 496 tttggtccaatcctcttgagctgaacatccttgaaccctgcctttgtgaaccaatcgata 555 ||||| ||||| ||||| | || ||||| || || || |||||||| ||||| || || Sbjct: 1970 tttgggccaattctcttaatcttcacatctttaaatccagcctttgtaaaccactcaatg 1911 Query: 556 tactcctcttcagtggggaacagcatccac 585 ||||| || || | ||||| ||||||||| Sbjct: 1910 tactcttcctctttcgggaaaagcatccac 1881 Score = 40.1 bits (20), Expect = 8.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 265 cctttgggcacaatctggtcctttatccacatgtaaataggcaccagaacatagta 320 ||||| || ||||| |||||||| | ||||||||||| ||| ||||| || ||||| Sbjct: 3588 ccttttggaacaatttggtccttgagccacatgtaaacagggaccaggacgtagta 3533
>gb|BT014152.1| Lycopersicon esculentum clone 133271F, mRNA sequence Length = 1488 Score = 48.1 bits (24), Expect = 0.035 Identities = 117/148 (79%) Strand = Plus / Minus Query: 370 ttcacaggcttgctaacatcttcagccttcggaccaagctgtaaaggggagtccccactt 429 |||||||||||||| ||||| ||| |||| ||||| ||||| || || || |||||| Sbjct: 1105 ttcacaggcttgctcacatcctcaaccttgggaccgagctgcaatggtgattccccagca 1046 Query: 430 tctttcttgacaccagtcacggagcaccccatgatgaggccatgcctacggacaccacgg 489 | | ||| || |||||||| ||||| |||||||| | || || | ||||||||||| Sbjct: 1045 tatggcttcactccagtcacagagcagcccatgatcaacccgtgtcggcggacaccacga 986 Query: 490 taccactttggtccaatcctcttgagct 517 ||||| ||||| ||||||| ||| |||| Sbjct: 985 taccattttgggccaatccgcttcagct 958
>gb|BT012858.1| Lycopersicon esculentum clone 113946R, mRNA sequence Length = 1278 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 274 acaatctggtcctttatccacatgtaaataggcaccagaacatagta 320 |||| |||||| || | ||||||||||||||| |||| ||||||||| Sbjct: 1050 acaacctggtctttaacccacatgtaaataggaaccaaaacatagta 1004
>ref|XM_416931.1| PREDICTED: Gallus gallus similar to septin 10 isoform 1 (LOC418732), mRNA Length = 2178 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 220 tcctctcttcgttgcagctcaa 241 |||||||||||||||||||||| Sbjct: 1084 tcctctcttcgttgcagctcaa 1063
>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold Length = 1996640 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 340 atgaggaagcggaagaaaaaagtga 364 ||||||||| ||||||||||||||| Sbjct: 857415 atgaggaagaggaagaaaaaagtga 857439
>emb|CT009535.6| M.truncatula DNA sequence from clone MTH2-68D12 on chromosome 3, complete sequence Length = 82241 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 350 ggaagaaaaaagtgataggat 370 ||||||||||||||||||||| Sbjct: 33236 ggaagaaaaaagtgataggat 33256
>emb|AL034381.2|SPCC61 S.pombe chromosome III cosmid c61 Length = 12235 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 154 ataaaaggtgaacaaaaacagatgt 178 |||||||||| |||||||||||||| Sbjct: 11806 ataaaaggtgtacaaaaacagatgt 11782
>gb|AC011611.26| Homo sapiens 12 BAC RP11-290L1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 179085 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 aagacccaaagtaaaataaat 136 ||||||||||||||||||||| Sbjct: 152263 aagacccaaagtaaaataaat 152283
>emb|BX321920.7| Zebrafish DNA sequence from clone DKEY-43F15 in linkage group 16, complete sequence Length = 92059 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 151 aatataaaaggtgaacaaaaa 171 ||||||||||||||||||||| Sbjct: 52716 aatataaaaggtgaacaaaaa 52696
>gb|AC024367.7| Homo sapiens chromosome 8, clone RP11-75G10, complete sequence Length = 170022 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 acccaaagtaaaataaataca 139 ||||||||||||||||||||| Sbjct: 67843 acccaaagtaaaataaataca 67823
>gb|AC159577.3| Macropus eugenii clone ME_KBa-436J11, complete sequence Length = 23152 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 340 atgaggaagcggaagaaaaaagtga 364 ||||||||| ||||||||||||||| Sbjct: 10321 atgaggaagaggaagaaaaaagtga 10345
>emb|AL845309.2| Mouse DNA sequence from clone RP23-376O20 on chromosome 2, complete sequence Length = 194490 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 424 ccactttctttcttgacacca 444 ||||||||||||||||||||| Sbjct: 87300 ccactttctttcttgacacca 87320
>gb|AC154867.1| Medicago truncatula chromosome 2 BAC clone mte1-6j20, complete sequence Length = 109340 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 acataacaagacccaaagta 128 |||||||||||||||||||| Sbjct: 93766 acataacaagacccaaagta 93747
>ref|NM_116205.3| Arabidopsis thaliana ATP binding / peptidyl-prolyl cis-trans isomerase AT3G63400 transcript variant AT3G63400.1 mRNA, complete cds Length = 2396 Score = 40.1 bits (20), Expect = 8.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 266 ctttgggcacaatctggtcctttatccacatgtaaatagg 305 ||||||| || ||||| ||||| ||||||||||| ||||| Sbjct: 2256 ctttgggaacgatctgatccttgatccacatgtagatagg 2295
>gb|BC079531.1| Mus musculus RIKEN cDNA 5730410I19 gene, mRNA (cDNA clone IMAGE:6402460), partial cds Length = 2972 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 caggcttgctaacatcttca 393 |||||||||||||||||||| Sbjct: 430 caggcttgctaacatcttca 411
>gb|AC150554.1| Drosophila melanogaster clone BACR21O10, complete sequence Length = 193926 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 354 gaaaaaagtgataggattcacaggcttg 381 ||||||||||| ||||||| |||||||| Sbjct: 19236 gaaaaaagtgagaggattcccaggcttg 19263
>gb|AC186003.3| Pan troglodytes BAC clone CH251-72E16 from chromosome 5, complete sequence Length = 191785 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 caatattatttctccacataacaa 117 ||||||||||| |||||||||||| Sbjct: 62094 caatattatttttccacataacaa 62071
>gb|AC125406.4| Mus musculus BAC clone RP23-32C18 from chromosome 19, complete sequence Length = 208557 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gaacaaaaacagatgtgaag 182 |||||||||||||||||||| Sbjct: 66379 gaacaaaaacagatgtgaag 66398
>gb|AC165168.3| Mus musculus BAC clone RP23-12D3 from chromosome 19, complete sequence Length = 215151 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gaacaaaaacagatgtgaag 182 |||||||||||||||||||| Sbjct: 194994 gaacaaaaacagatgtgaag 195013
>gb|AC132316.3| Mus musculus BAC clone RP24-236C17 from chromosome 7, complete sequence Length = 146778 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 41 acaaatgagccatttcacaccaaa 64 |||||||||||| ||||||||||| Sbjct: 88780 acaaatgagccaattcacaccaaa 88757
>gb|AC132411.3| Mus musculus BAC clone RP23-352O24 from chromosome 1, complete sequence Length = 181902 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 caggaaatataaaaggtgaa 165 |||||||||||||||||||| Sbjct: 142674 caggaaatataaaaggtgaa 142655
>gb|AC127587.4| Mus musculus BAC clone RP24-143O1 from chromosome 7, complete sequence Length = 139419 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 acaaatgagccatttcacaccaaa 64 |||||||||||| ||||||||||| Sbjct: 127951 acaaatgagccaattcacaccaaa 127974
>gb|AC122231.2| Mus musculus BAC clone RP23-135M3 from 5, complete sequence Length = 172949 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 attcacaggcttgctaacat 388 |||||||||||||||||||| Sbjct: 112721 attcacaggcttgctaacat 112740
>gb|BC058535.1| Mus musculus RIKEN cDNA 5730410I19 gene, mRNA (cDNA clone IMAGE:6812098), partial cds Length = 2985 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 caggcttgctaacatcttca 393 |||||||||||||||||||| Sbjct: 417 caggcttgctaacatcttca 398
>gb|AC146749.23| Medicago truncatula clone mth2-145a1, complete sequence Length = 130793 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 acataacaagacccaaagta 128 |||||||||||||||||||| Sbjct: 1550 acataacaagacccaaagta 1569
>gb|BC051678.1| Mus musculus RIKEN cDNA 5730410I19 gene, mRNA (cDNA clone IMAGE:30009392), partial cds Length = 2795 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 caggcttgctaacatcttca 393 |||||||||||||||||||| Sbjct: 261 caggcttgctaacatcttca 242
>gb|AC132315.4| Mus musculus BAC clone RP24-234J3 from chromosome 12, complete sequence Length = 181828 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 caggcttgctaacatcttca 393 |||||||||||||||||||| Sbjct: 127028 caggcttgctaacatcttca 127009
>gb|AC026122.14| Homo sapiens 12 BAC RP11-902D13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 184834 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 tccaagtctccaatattatt 103 |||||||||||||||||||| Sbjct: 96646 tccaagtctccaatattatt 96627
>gb|AC090459.6| Homo sapiens chromosome 18, clone RP11-125E6, complete sequence Length = 146310 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 gcttgctaacatcttcagcc 396 |||||||||||||||||||| Sbjct: 113396 gcttgctaacatcttcagcc 113415
>gb|AC036196.10| Homo sapiens chromosome 15, clone RP11-599A21, complete sequence Length = 180366 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 atgtgaagtgcctaatatag 194 |||||||||||||||||||| Sbjct: 40544 atgtgaagtgcctaatatag 40563
>gb|AC099845.2| Homo sapiens chromosome 18, clone RP11-812D21, complete sequence Length = 189559 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 gcttgctaacatcttcagcc 396 |||||||||||||||||||| Sbjct: 147554 gcttgctaacatcttcagcc 147535
>gb|AC068870.17| Homo sapiens chromosome , clone RP11-775C24, complete sequence Length = 194237 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 atgtgaagtgcctaatatag 194 |||||||||||||||||||| Sbjct: 149843 atgtgaagtgcctaatatag 149862
>gb|AC021106.6| Homo sapiens BAC clone RP11-177C12 from 4, complete sequence Length = 195108 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 aaatataaaaggtgaacaaa 169 |||||||||||||||||||| Sbjct: 8387 aaatataaaaggtgaacaaa 8368
>dbj|AK146308.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730049B22 product:hypothetical Zn-finger (putative), N-recognin/FYVE/PHD zinc finger containing protein, full insert sequence Length = 2158 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 caggcttgctaacatcttca 393 |||||||||||||||||||| Sbjct: 735 caggcttgctaacatcttca 716
>dbj|AK149989.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530115A08 product:hypothetical Zn-finger (putative), N-recognin/FYVE/PHD zinc finger containing protein, full insert sequence Length = 3203 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 caggcttgctaacatcttca 393 |||||||||||||||||||| Sbjct: 688 caggcttgctaacatcttca 669
>gb|AC020900.5| Homo sapiens chromosome 5 clone CTC-506B8, complete sequence Length = 183768 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 caatattatttctccacataacaa 117 ||||||||||| |||||||||||| Sbjct: 61567 caatattatttttccacataacaa 61544
>dbj|AK155611.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730024J11 product:hypothetical Zn-finger (putative), N-recognin/FYVE/PHD zinc finger containing protein, full insert sequence Length = 2336 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 caggcttgctaacatcttca 393 |||||||||||||||||||| Sbjct: 604 caggcttgctaacatcttca 585
>gb|AC132231.6| Mus musculus BAC clone RP24-484D4 from chromosome 1, complete sequence Length = 188905 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 caggaaatataaaaggtgaa 165 |||||||||||||||||||| Sbjct: 450 caggaaatataaaaggtgaa 431
>emb|BX649547.7| Zebrafish DNA sequence from clone DKEY-19E10 in linkage group 3, complete sequence Length = 237569 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 gtttaatccaagtctccaat 97 |||||||||||||||||||| Sbjct: 56881 gtttaatccaagtctccaat 56862
>dbj|AK088208.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430007F07 product:hypothetical PHD-finger/Putative zinc finger in N-recognin containing protein, full insert sequence Length = 3249 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 caggcttgctaacatcttca 393 |||||||||||||||||||| Sbjct: 735 caggcttgctaacatcttca 716
>dbj|AK011968.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610302N12 product:unclassifiable, full insert sequence Length = 610 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 caggcttgctaacatcttca 393 |||||||||||||||||||| Sbjct: 604 caggcttgctaacatcttca 585
>dbj|AK017542.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730410I19 product:hypothetical Putative zinc finger in N-recognin containing protein, full insert sequence Length = 829 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 caggcttgctaacatcttca 393 |||||||||||||||||||| Sbjct: 689 caggcttgctaacatcttca 670
>gb|BC094423.1| Mus musculus RIKEN cDNA 5730410I19 gene, mRNA (cDNA clone MGC:122967 IMAGE:6812389), complete cds Length = 3228 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 caggcttgctaacatcttca 393 |||||||||||||||||||| Sbjct: 691 caggcttgctaacatcttca 672
>gb|AC007984.4|AC007984 Drosophila melanogaster, chromosome 3R, region 97D-97E, BAC clone BACR05C10, complete sequence Length = 174894 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 354 gaaaaaagtgataggattcacaggcttg 381 ||||||||||| ||||||| |||||||| Sbjct: 128348 gaaaaaagtgagaggattcccaggcttg 128375
>gb|AC008906.5|AC008906 Homo sapiens chromosome 5 clone CTD-2260A17, complete sequence Length = 151801 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 94 caatattatttctccacataacaa 117 ||||||||||| |||||||||||| Sbjct: 10836 caatattatttttccacataacaa 10859
>gb|BC094323.1| Mus musculus cDNA clone IMAGE:6401668 Length = 3287 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 caggcttgctaacatcttca 393 |||||||||||||||||||| Sbjct: 740 caggcttgctaacatcttca 721
>dbj|AK203922.1| Mus musculus cDNA, clone:Y1G0146K24, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000046404, based on BLAT search Length = 399 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 caggcttgctaacatcttca 393 |||||||||||||||||||| Sbjct: 96 caggcttgctaacatcttca 77
>dbj|AK201594.1| Mus musculus cDNA, clone:Y1G0138L19, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000046404, based on BLAT search Length = 399 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 caggcttgctaacatcttca 393 |||||||||||||||||||| Sbjct: 94 caggcttgctaacatcttca 75
>gb|AE003759.3| Drosophila melanogaster chromosome 3R, section 97 of 118 of the complete sequence Length = 222554 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 354 gaaaaaagtgataggattcacaggcttg 381 ||||||||||| ||||||| |||||||| Sbjct: 17901 gaaaaaagtgagaggattcccaggcttg 17928
>gb|AY880323.1| Gekko japonicus GekBS092P mRNA, complete cds Length = 1269 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 atgaggaagcggaagaaaaa 359 |||||||||||||||||||| Sbjct: 585 atgaggaagcggaagaaaaa 604
>ref|NM_025666.1| Mus musculus RIKEN cDNA 5730410I19 gene (5730410I19Rik), mRNA Length = 3249 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 caggcttgctaacatcttca 393 |||||||||||||||||||| Sbjct: 735 caggcttgctaacatcttca 716
>dbj|AP006106.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT40L14, TM0192, complete sequence Length = 109465 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 aagaaaaaagtgataggatt 371 |||||||||||||||||||| Sbjct: 61702 aagaaaaaagtgataggatt 61721 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,929,763 Number of Sequences: 3902068 Number of extensions: 6929763 Number of successful extensions: 108769 Number of sequences better than 10.0: 89 Number of HSP's better than 10.0 without gapping: 89 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 108519 Number of HSP's gapped (non-prelim): 239 length of query: 620 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 597 effective length of database: 17,143,297,704 effective search space: 10234548729288 effective search space used: 10234548729288 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)