ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal32l05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 56 5e-05
2dbj|AP003407.3| Oryza sativa (japonica cultivar-group) genomic D... 56 5e-05
3gb|AF429948.1| Oryza sativa putative fructokinase I mRNA, comple... 56 5e-05
4dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic D... 56 5e-05
5dbj|AK120887.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 5e-05
6dbj|AK060500.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 5e-05
7gb|AC004895.2| Homo sapiens PAC clone RP4-810E6 from 7, complete... 42 0.76
8gb|AC112030.4| Rattus norvegicus 4 BAC CH230-100K8 (Children's H... 42 0.76
9gb|AC116501.7| Mus musculus chromosome 5, clone RP24-300D7, comp... 40 3.0
10gb|AC118025.18| Mus musculus chromosome 6, clone RP23-461L9, com... 40 3.0
11gb|AC125024.6| Mus musculus chromosome 5, clone RP24-320B23, com... 40 3.0
12gb|AC113599.10| Mus musculus chromosome 18, clone RP23-5D23, com... 40 3.0
13gb|AC113010.10| Mus musculus chromosome 18, clone RP23-172F6, co... 40 3.0
14gb|AC095563.7| Rattus norvegicus 9 BAC CH230-7G11 (Children's Ho... 40 3.0
15emb|AL732372.15| Human DNA sequence from clone RP4-669L17 on chr... 40 3.0
16emb|AL627309.15| Human DNA sequence from clone RP11-34P13 on chr... 40 3.0
17emb|AL672310.3| Human DNA sequence from clone RP11-226I21 on chr... 40 3.0
18emb|AL353802.14| Human DNA sequence from clone RP4-662P1 on chro... 40 3.0
19ref|XM_782284.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 3.0
20gb|AC092670.2| Homo sapiens BAC clone RP11-586D5 from 4, complet... 40 3.0
21gb|AC055120.5| Homo sapiens BAC clone RP11-336N6 from 4, complet... 40 3.0
22dbj|AK032510.1| Mus musculus adult male olfactory brain cDNA, RI... 40 3.0
23dbj|AK043710.1| Mus musculus 10 days neonate cortex cDNA, RIKEN ... 40 3.0
24dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
25gb|AC012005.4|AC012005 Homo sapiens clone RP11-533E23, complete ... 40 3.0
26gb|AC136309.9| Homo sapiens chromosome 11, clone RP11-242C5, com... 40 3.0
27gb|AC006328.5|AC006328 Homo sapiens BAC clone RP11-102O5 from Y,... 40 3.0
28ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P... 40 3.0
29gb|AC131281.7| Homo sapiens chromosome 8, clone RP11-585F1, comp... 40 3.0
30gb|AF281920.1|AF281920 Homo sapiens clone 16qtel_c53bt7 sequence 40 3.0
31gb|AC138033.1| Homo sapiens chromosome 5 clone XXcos-B22C66, com... 40 3.0
32gb|AC137934.1| Homo sapiens chromosome 16 clone XXcos-yA11c16, c... 40 3.0
33gb|AC114498.2| Homo sapiens chromosome 1 clone RP5-857K21, compl... 40 3.0
34gb|AC130223.2| Homo sapiens cosmid clone XXcos-2003C17 from 2, c... 40 3.0
35gb|AC134873.2| Homo sapiens cosmid clone XXcos-2003C15 from 2, c... 40 3.0
36dbj|AP005810.4| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
37dbj|AP003863.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
38emb|BX649379.10| Human DNA sequence from clone RP5-1040D10 on ch... 40 3.0
39gb|AC137743.3| Mus musculus BAC clone RP24-469M15 from 6, comple... 40 3.0
40dbj|AP006222.1| Homo sapiens genomic DNA, chromosome Un, clone:C... 40 3.0
41emb|AL844530.7| Mouse DNA sequence from clone RP23-248L2 on chro... 40 3.0
42emb|AL136038.5|CNS01DVT Human chromosome 14 DNA sequence BAC C-2... 40 3.0 
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                    
Query: 106      tgctcctgatccagaacagcgtacaatacaatttgc 141
                ||||||||||||||| |||| |||||||||||||||
Sbjct: 38878523 tgctcctgatccagatcagcatacaatacaatttgc 38878558
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>dbj|AP003407.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1078G07
          Length = 199457

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                  
Query: 106    tgctcctgatccagaacagcgtacaatacaatttgc 141
              ||||||||||||||| |||| |||||||||||||||
Sbjct: 151405 tgctcctgatccagatcagcatacaatacaatttgc 151440
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>gb|AF429948.1| Oryza sativa putative fructokinase I mRNA, complete cds
          Length = 1135

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 106  tgctcctgatccagaacagcgtacaatacaatttgc 141
            ||||||||||||||| |||| |||||||||||||||
Sbjct: 1107 tgctcctgatccagatcagcatacaatacaatttgc 1072
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>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0696G06
          Length = 142571

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                 
Query: 106   tgctcctgatccagaacagcgtacaatacaatttgc 141
             ||||||||||||||| |||| |||||||||||||||
Sbjct: 43309 tgctcctgatccagatcagcatacaatacaatttgc 43344
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>dbj|AK120887.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023029D05, full
           insert sequence
          Length = 1216

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 106 tgctcctgatccagaacagcgtacaatacaatttgc 141
           ||||||||||||||| |||| |||||||||||||||
Sbjct: 912 tgctcctgatccagatcagcatacaatacaatttgc 877
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>dbj|AK060500.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-F08, full
            insert sequence
          Length = 1380

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 106  tgctcctgatccagaacagcgtacaatacaatttgc 141
            ||||||||||||||| |||| |||||||||||||||
Sbjct: 1268 tgctcctgatccagatcagcatacaatacaatttgc 1233
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>gb|AC004895.2| Homo sapiens PAC clone RP4-810E6 from 7, complete sequence
          Length = 152927

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 29     caaacaaaaaacccttagtaa 49
              |||||||||||||||||||||
Sbjct: 117266 caaacaaaaaacccttagtaa 117286
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>gb|AC112030.4| Rattus norvegicus 4 BAC CH230-100K8 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 237374

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 60     ggcaaaacaaaaaggcaagca 80
              |||||||||||||||||||||
Sbjct: 114060 ggcaaaacaaaaaggcaagca 114040
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>gb|AC116501.7| Mus musculus chromosome 5, clone RP24-300D7, complete sequence
          Length = 174365

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 29     caaacaaaaaacccttagta 48
              ||||||||||||||||||||
Sbjct: 131955 caaacaaaaaacccttagta 131974
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>gb|AC118025.18| Mus musculus chromosome 6, clone RP23-461L9, complete sequence
          Length = 198895

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    aacaaaaaacccttagtaaa 50
             ||||||||||||||||||||
Sbjct: 37569 aacaaaaaacccttagtaaa 37588
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>gb|AC125024.6| Mus musculus chromosome 5, clone RP24-320B23, complete sequence
          Length = 192305

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    caaacaaaaaacccttagta 48
             ||||||||||||||||||||
Sbjct: 28606 caaacaaaaaacccttagta 28625
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>gb|AC113599.10| Mus musculus chromosome 18, clone RP23-5D23, complete sequence
          Length = 217989

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 63     aaaacaaaaaggcaagcaggggta 86
              |||||||||||| |||||||||||
Sbjct: 168178 aaaacaaaaaggaaagcaggggta 168155
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>gb|AC113010.10| Mus musculus chromosome 18, clone RP23-172F6, complete sequence
          Length = 246921

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 63    aaaacaaaaaggcaagcaggggta 86
             |||||||||||| |||||||||||
Sbjct: 71215 aaaacaaaaaggaaagcaggggta 71192
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>gb|AC095563.7| Rattus norvegicus 9 BAC CH230-7G11 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 237247

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 61     gcaaaacaaaaaggcaagca 80
              ||||||||||||||||||||
Sbjct: 161972 gcaaaacaaaaaggcaagca 161991
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>emb|AL732372.15| Human DNA sequence from clone RP4-669L17 on chromosome 1 Contains five
             novel genes, two novel pseudogenes and the gene for a
             novel protein similar to the olfactory receptor family,
             complete sequence
          Length = 153649

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    aatagggcaaaacaaaaagg 74
             ||||||||||||||||||||
Sbjct: 96005 aatagggcaaaacaaaaagg 95986
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>emb|AL627309.15| Human DNA sequence from clone RP11-34P13 on chromosome 1 Contains a
             pseudogene similar to part of DEAD/H box polypeptide 11
             (CHL1-like helicase homolog, S. cerevisiae) (DDX11), two
             novel pseudogenes, nine novel genes, two novel proteins
             similar to the olfactory receptor family, a capicua
             homolog (Drosophila) (CIC) pseudogene and two CpG islands,
             complete sequence
          Length = 166904

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    aatagggcaaaacaaaaagg 74
             ||||||||||||||||||||
Sbjct: 84660 aatagggcaaaacaaaaagg 84679
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>emb|AL672310.3| Human DNA sequence from clone RP11-226I21 on chromosome 6 Contains
             putative novel gene, complete sequence
          Length = 53890

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    aatagggcaaaacaaaaagg 74
             ||||||||||||||||||||
Sbjct: 41891 aatagggcaaaacaaaaagg 41872
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>emb|AL353802.14| Human DNA sequence from clone RP4-662P1 on chromosome 1p31.3-32.3
             Contains part of the gene for InaD-like protein (INADL),
             complete sequence
          Length = 143226

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    caaacaaaaaacccttagta 48
             ||||||||||||||||||||
Sbjct: 26751 caaacaaaaaacccttagta 26732
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>ref|XM_782284.1| PREDICTED: Strongylocentrotus purpuratus similar to notch1
            preproprotein (LOC582329), mRNA
          Length = 5516

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 16   aagaattgcaatncaaacaaaaa 38
            |||||||||||| ||||||||||
Sbjct: 4930 aagaattgcaattcaaacaaaaa 4952
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>gb|AC092670.2| Homo sapiens BAC clone RP11-586D5 from 4, complete sequence
          Length = 157951

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   aatagggcaaaacaaaaagg 74
            ||||||||||||||||||||
Sbjct: 4496 aatagggcaaaacaaaaagg 4477
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>gb|AC055120.5| Homo sapiens BAC clone RP11-336N6 from 4, complete sequence
          Length = 178524

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 29     caaacaaaaaacccttagta 48
              ||||||||||||||||||||
Sbjct: 105080 caaacaaaaaacccttagta 105061
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>dbj|AK032510.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
            enriched library, clone:6430575D21 product:hypothetical
            Microbodies C-terminal targeting signal/CUB domain/Low
            density lipoprotein (LDL)-receptor class A (LDLRA) domain
            containing protein, full insert sequence
          Length = 2399

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 63   aaaacaaaaaggcaagcaggggta 86
            |||||||||||| |||||||||||
Sbjct: 2097 aaaacaaaaaggaaagcaggggta 2074
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>dbj|AK043710.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched
            library, clone:A830022O03 product:hypothetical
            Microbodies C-terminal targeting signal/LDL-receptor
            class A (LDLRA) domain profile/CUB domain/Low density
            lipoprotein (LDL)-receptor class A (LDLRA) domain/CUB
            domain profile containing protein, full insert sequence
          Length = 3803

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 63   aaaacaaaaaggcaagcaggggta 86
            |||||||||||| |||||||||||
Sbjct: 2566 aaaacaaaaaggaaagcaggggta 2543
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 178      acgccttctccatcagccgc 197
                ||||||||||||||||||||
Sbjct: 21091482 acgccttctccatcagccgc 21091501
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>gb|AC012005.4|AC012005 Homo sapiens clone RP11-533E23, complete sequence
          Length = 189557

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     aatagggcaaaacaaaaagg 74
              ||||||||||||||||||||
Sbjct: 126773 aatagggcaaaacaaaaagg 126754
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>gb|AC136309.9| Homo sapiens chromosome 11, clone RP11-242C5, complete sequence
          Length = 150642

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    aatagggcaaaacaaaaagg 74
             ||||||||||||||||||||
Sbjct: 28393 aatagggcaaaacaaaaagg 28412
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>gb|AC006328.5|AC006328 Homo sapiens BAC clone RP11-102O5 from Y, complete sequence
          Length = 177769

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    aatagggcaaaacaaaaagg 74
             ||||||||||||||||||||
Sbjct: 13803 aatagggcaaaacaaaaagg 13822
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>ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P3 and inverted repeat IR2
               (P1-P2-P3-IR2@) on chromosome Y
          Length = 4538292

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 55      aatagggcaaaacaaaaagg 74
               ||||||||||||||||||||
Sbjct: 3536154 aatagggcaaaacaaaaagg 3536173



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 55      aatagggcaaaacaaaaagg 74
               ||||||||||||||||||||
Sbjct: 2512224 aatagggcaaaacaaaaagg 2512205
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>gb|AC131281.7| Homo sapiens chromosome 8, clone RP11-585F1, complete sequence
          Length = 120139

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    aatagggcaaaacaaaaagg 74
             ||||||||||||||||||||
Sbjct: 97614 aatagggcaaaacaaaaagg 97595
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>gb|AF281920.1|AF281920 Homo sapiens clone 16qtel_c53bt7 sequence
          Length = 485

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 55  aatagggcaaaacaaaaagg 74
           ||||||||||||||||||||
Sbjct: 266 aatagggcaaaacaaaaagg 285
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>gb|AC138033.1| Homo sapiens chromosome 5 clone XXcos-B22C66, complete sequence
          Length = 38954

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    aatagggcaaaacaaaaagg 74
             ||||||||||||||||||||
Sbjct: 16751 aatagggcaaaacaaaaagg 16770
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>gb|AC137934.1| Homo sapiens chromosome 16 clone XXcos-yA11c16, complete sequence
          Length = 35141

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    aatagggcaaaacaaaaagg 74
             ||||||||||||||||||||
Sbjct: 18550 aatagggcaaaacaaaaagg 18531
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>gb|AC114498.2| Homo sapiens chromosome 1 clone RP5-857K21, complete sequence
          Length = 121664

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    aatagggcaaaacaaaaagg 74
             ||||||||||||||||||||
Sbjct: 55375 aatagggcaaaacaaaaagg 55394
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>gb|AC130223.2| Homo sapiens cosmid clone XXcos-2003C17 from 2, complete sequence
          Length = 16515

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    aatagggcaaaacaaaaagg 74
             ||||||||||||||||||||
Sbjct: 12598 aatagggcaaaacaaaaagg 12579
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>gb|AC134873.2| Homo sapiens cosmid clone XXcos-2003C15 from 2, complete sequence
          Length = 36966

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 55  aatagggcaaaacaaaaagg 74
           ||||||||||||||||||||
Sbjct: 898 aatagggcaaaacaaaaagg 917
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>dbj|AP005810.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0696F12
          Length = 165227

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 178   acgccttctccatcagccgc 197
             ||||||||||||||||||||
Sbjct: 12843 acgccttctccatcagccgc 12862
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>dbj|AP003863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1058_A12
          Length = 152269

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 178    acgccttctccatcagccgc 197
              ||||||||||||||||||||
Sbjct: 134781 acgccttctccatcagccgc 134800
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>emb|BX649379.10| Human DNA sequence from clone RP5-1040D10 on chromosome 1, complete
             sequence
          Length = 93321

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    aatagggcaaaacaaaaagg 74
             ||||||||||||||||||||
Sbjct: 38056 aatagggcaaaacaaaaagg 38037
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>gb|AC137743.3| Mus musculus BAC clone RP24-469M15 from 6, complete sequence
          Length = 170200

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    aacaaaaaacccttagtaaa 50
             ||||||||||||||||||||
Sbjct: 23883 aacaaaaaacccttagtaaa 23864
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>dbj|AP006222.1| Homo sapiens genomic DNA, chromosome Un, clone:CMC-68E4, telomere
             region, complete sequence
          Length = 40302

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    aatagggcaaaacaaaaagg 74
             ||||||||||||||||||||
Sbjct: 14091 aatagggcaaaacaaaaagg 14110
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>emb|AL844530.7| Mouse DNA sequence from clone RP23-248L2 on chromosome 2, complete
             sequence
          Length = 169779

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 61    gcaaaacaaaaaggcaagcagggg 84
             |||||||| |||||||||||||||
Sbjct: 77709 gcaaaacagaaaggcaagcagggg 77732
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>emb|AL136038.5|CNS01DVT Human chromosome 14 DNA sequence BAC C-2302E22 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 151930

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     gaaatagggcaaaacaaaaa 72
              ||||||||||||||||||||
Sbjct: 129342 gaaatagggcaaaacaaaaa 129323


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,928,201
Number of Sequences: 3902068
Number of extensions: 2928201
Number of successful extensions: 55290
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55193
Number of HSP's gapped (non-prelim): 97
length of query: 233
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 211
effective length of database: 17,147,199,772
effective search space: 3618059151892
effective search space used: 3618059151892
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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