ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal33a02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BT009238.1| Triticum aestivum clone wlk1.pk0001.f8:fis, full ... 523 e-145
2ref|XM_478418.1| Oryza sativa (japonica cultivar-group), mRNA 131 3e-27
3dbj|AK061900.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 3e-27
4dbj|AK065559.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 3e-27
5dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
6dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
7dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
8gb|AY110342.1| Zea mays CL866_3 mRNA sequence 60 8e-06
9gb|BT018852.1| Zea mays clone EL01N0555H08.d mRNA sequence 58 3e-05
10gb|AY109669.1| Zea mays CL866_1 mRNA sequence 58 3e-05
11dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
12dbj|AP000616.2| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
13dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
14gb|AC163036.2| Mus musculus BAC clone RP23-219G12 from chromosom... 42 1.9
15gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, ... 42 1.9
16gb|AC151266.4| Mus musculus BAC clone RP24-279K24 from chromosom... 42 1.9
17gb|AC124421.4| Mus musculus BAC clone RP24-323H7 from chromosome... 40 7.7
18dbj|AB234881.1| Trifolium pratense mRNA for putative DNA binding... 40 7.7
19dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
20gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 7.7
21gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.7
22emb|AL844497.4|CNS08CAU Oryza sativa chromosome 12, . BAC OSJNBa... 40 7.7
23gb|U31328.1|BDU31328 Blaberus discoidalis hexamerin subunit prec... 40 7.7

>gb|BT009238.1| Triticum aestivum clone wlk1.pk0001.f8:fis, full insert mRNA
           sequence
          Length = 1160

 Score =  523 bits (264), Expect = e-145
 Identities = 273/276 (98%)
 Strand = Plus / Minus

                                                                       
Query: 292 tgttgctgatcgtaactgccataaccagagtatccatagttttgcatgctaggatcttgc 351
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 tgttgctgctcgtaactgccataaccagagtatccatagttttgcatgctaggatcttgc 788

                                                                       
Query: 352 gcattgggtgcaccatagtaagcatcaggaccctgttgatatccatagtagctgttgcca 411
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 787 gcattgggtgcaccatagtatgcatcaggaccctgttgatatccatagtagctgttgcca 728

                                                                       
Query: 412 ttaccctggtttgcatcctgctggggaggctgtttgttttggctacggccccatgaaaga 471
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 727 ttaccctggtttgcatcctgctggggaggctgtttgttttggctacggccccatgaaagg 668

                                                                       
Query: 472 cgaacattggaactaccaatctgagacccattcagcgcactgatggcctgctcagcgcac 531
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 cgaacattggaactaccaatctgagacccattcagcgcactgatggcctgctcagcgcac 608

                                               
Query: 532 gccctgctggtaaattggacaaatccacaacgcttg 567
           ||||||||||||||||||||||||||||||||||||
Sbjct: 607 gccctgctggtaaattggacaaatccacaacgcttg 572



 Score =  297 bits (150), Expect = 2e-77
 Identities = 192/202 (95%), Gaps = 3/202 (1%)
 Strand = Plus / Minus

                                                                        
Query: 28   gacatagttcgataattttaaaaccaagnagaagcactgaatagaactagagttactgcc 87
            |||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 1108 gacatagttcgataattt-aaaaccaag-agaagcactgaatagaactagagctactgcc 1051

                                                                        
Query: 88   caccagtcaaagtactactagatacgacccatcttacaaaacaaggacacctatacgatg 147
            || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| 
Sbjct: 1050 caacagtcaaagtactactagatacgacccatcttacaaa-caaggacacctatacgata 992

                                                                        
Query: 148  actcataacgcggtagcattcagttcatgcagctctgaatctctgattgagctccatcgc 207
            |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 991  actcatgacgcggtagcattcagttcatgcagctctgaatctctgattgcgctccatcgc 932

                                  
Query: 208  ctcgatggtcactgctgggggg 229
            ||| ||||||||||||| ||||
Sbjct: 931  ctcaatggtcactgctgtgggg 910



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>ref|XM_478418.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1302

 Score =  131 bits (66), Expect = 3e-27
 Identities = 230/282 (81%), Gaps = 12/282 (4%)
 Strand = Plus / Minus

                                                                        
Query: 295  tgctgatcgtaactgccataaccagagtatccatagt---tttgcatgctaggatcttgc 351
            ||||| |||||| ||||||| ||||| ||||||||||   |||||   |||||||| || 
Sbjct: 1169 tgctgttcgtaattgccatagccagaatatccatagtagttttgcgcactaggatcctgt 1110

                                                                        
Query: 352  gcattgggtgcaccatagtaagca---tcaggaccctgttgatatccatagtagctgttg 408
            |||||||||||||||||||||| |   |||   |||||||| ||||||||||||   |||
Sbjct: 1109 gcattgggtgcaccatagtaagaagaatcatagccctgttggtatccatagtag---ttg 1053

                                                                        
Query: 409  ccattaccctggtttgcatcctgctggggaggctgtttgttttggc---tacggccccat 465
            ||||| | |||||| |||||||||||||||| ||| ||||| ||     |||||||||||
Sbjct: 1052 ccattccactggttggcatcctgctggggagcctgcttgttctgaggagtacggccccat 993

                                                                        
Query: 466  gaaagacgaacattggaactaccaatctgagacccattcagcgcactgatggcctgctca 525
            ||||| ||||| |     | |||||||||||||||||||||| ||| |||||| |  |||
Sbjct: 992  gaaagccgaacttgctgcccaccaatctgagacccattcagcacacggatggcttcttca 933

                                                      
Query: 526  gcgcacgccctgctggtaaattggacaaatccacaacgcttg 567
            ||  | | |||||| |||||||||||||||||||||||||||
Sbjct: 932  gcagatgacctgctagtaaattggacaaatccacaacgcttg 891



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>dbj|AK061900.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-H03, full
           insert sequence
          Length = 1152

 Score =  131 bits (66), Expect = 3e-27
 Identities = 230/282 (81%), Gaps = 12/282 (4%)
 Strand = Plus / Minus

                                                                       
Query: 295 tgctgatcgtaactgccataaccagagtatccatagt---tttgcatgctaggatcttgc 351
           ||||| |||||| ||||||| ||||| ||||||||||   |||||   |||||||| || 
Sbjct: 765 tgctgttcgtaattgccatagccagaatatccatagtagttttgcgcactaggatcctgt 706

                                                                       
Query: 352 gcattgggtgcaccatagtaagca---tcaggaccctgttgatatccatagtagctgttg 408
           |||||||||||||||||||||| |   |||   |||||||| ||||||||||||   |||
Sbjct: 705 gcattgggtgcaccatagtaagaagaatcatagccctgttggtatccatagtag---ttg 649

                                                                       
Query: 409 ccattaccctggtttgcatcctgctggggaggctgtttgttttggc---tacggccccat 465
           ||||| | |||||| |||||||||||||||| ||| ||||| ||     |||||||||||
Sbjct: 648 ccattccactggttggcatcctgctggggagcctgcttgttctgaggagtacggccccat 589

                                                                       
Query: 466 gaaagacgaacattggaactaccaatctgagacccattcagcgcactgatggcctgctca 525
           ||||| ||||| |     | |||||||||||||||||||||| ||| |||||| |  |||
Sbjct: 588 gaaagccgaacttgctgcccaccaatctgagacccattcagcacacggatggcttcttca 529

                                                     
Query: 526 gcgcacgccctgctggtaaattggacaaatccacaacgcttg 567
           ||  | | |||||| |||||||||||||||||||||||||||
Sbjct: 528 gcagatgacctgctagtaaattggacaaatccacaacgcttg 487



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>dbj|AK065559.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013031C16, full
            insert sequence
          Length = 1693

 Score =  131 bits (66), Expect = 3e-27
 Identities = 230/282 (81%), Gaps = 12/282 (4%)
 Strand = Plus / Minus

                                                                        
Query: 295  tgctgatcgtaactgccataaccagagtatccatagt---tttgcatgctaggatcttgc 351
            ||||| |||||| ||||||| ||||| ||||||||||   |||||   |||||||| || 
Sbjct: 1419 tgctgttcgtaattgccatagccagaatatccatagtagttttgcgcactaggatcctgt 1360

                                                                        
Query: 352  gcattgggtgcaccatagtaagca---tcaggaccctgttgatatccatagtagctgttg 408
            |||||||||||||||||||||| |   |||   |||||||| ||||||||||||   |||
Sbjct: 1359 gcattgggtgcaccatagtaagaagaatcatagccctgttggtatccatagtag---ttg 1303

                                                                        
Query: 409  ccattaccctggtttgcatcctgctggggaggctgtttgttttggc---tacggccccat 465
            ||||| | |||||| |||||||||||||||| ||| ||||| ||     |||||||||||
Sbjct: 1302 ccattccactggttggcatcctgctggggagcctgcttgttctgaggagtacggccccat 1243

                                                                        
Query: 466  gaaagacgaacattggaactaccaatctgagacccattcagcgcactgatggcctgctca 525
            ||||| ||||| |     | |||||||||||||||||||||| ||| |||||| |  |||
Sbjct: 1242 gaaagccgaacttgctgcccaccaatctgagacccattcagcacacggatggcttcttca 1183

                                                      
Query: 526  gcgcacgccctgctggtaaattggacaaatccacaacgcttg 567
            ||  | | |||||| |||||||||||||||||||||||||||
Sbjct: 1182 gcagatgacctgctagtaaattggacaaatccacaacgcttg 1141



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 125/151 (82%), Gaps = 9/151 (5%)
 Strand = Plus / Minus

                                                                            
Query: 295      tgctgatcgtaactgccataaccagagtatccatagt---tttgcatgctaggatcttgc 351
                ||||| |||||| ||||||| ||||| ||||||||||   |||||   |||||||| || 
Sbjct: 19870510 tgctgttcgtaattgccatagccagaatatccatagtagttttgcgcactaggatcctgt 19870451

                                                                            
Query: 352      gcattgggtgcaccatagt---aagcatcaggaccctgttgatatccatagtagctgttg 408
                |||||||||||||||||||   ||| ||||   |||||||| |||||||||||   ||||
Sbjct: 19870450 gcattgggtgcaccatagtaagaagaatcatagccctgttggtatccatagta---gttg 19870394

                                               
Query: 409      ccattaccctggtttgcatcctgctggggag 439
                ||||| | |||||| ||||||||||||||||
Sbjct: 19870393 ccattccactggttggcatcctgctggggag 19870363



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                                  
Query: 534      cctgctggtaaattggacaaatccacaacgcttg 567
                |||||| |||||||||||||||||||||||||||
Sbjct: 19870085 cctgctagtaaattggacaaatccacaacgcttg 19870052



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                 
Query: 486      accaatctgagacccattcagcgcactgatggc 518
                |||||||||||||||||||||| ||| ||||||
Sbjct: 19870228 accaatctgagacccattcagcacacggatggc 19870196



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>dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0036M16
          Length = 158880

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 125/151 (82%), Gaps = 9/151 (5%)
 Strand = Plus / Minus

                                                                         
Query: 295   tgctgatcgtaactgccataaccagagtatccatagt---tttgcatgctaggatcttgc 351
             ||||| |||||| ||||||| ||||| ||||||||||   |||||   |||||||| || 
Sbjct: 35160 tgctgttcgtaattgccatagccagaatatccatagtagttttgcgcactaggatcctgt 35101

                                                                         
Query: 352   gcattgggtgcaccatagt---aagcatcaggaccctgttgatatccatagtagctgttg 408
             |||||||||||||||||||   ||| ||||   |||||||| |||||||||||   ||||
Sbjct: 35100 gcattgggtgcaccatagtaagaagaatcatagccctgttggtatccatagta---gttg 35044

                                            
Query: 409   ccattaccctggtttgcatcctgctggggag 439
             ||||| | |||||| ||||||||||||||||
Sbjct: 35043 ccattccactggttggcatcctgctggggag 35013



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                               
Query: 534   cctgctggtaaattggacaaatccacaacgcttg 567
             |||||| |||||||||||||||||||||||||||
Sbjct: 34735 cctgctagtaaattggacaaatccacaacgcttg 34702



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 486   accaatctgagacccattcagcgcactgatggc 518
             |||||||||||||||||||||| ||| ||||||
Sbjct: 34878 accaatctgagacccattcagcacacggatggc 34846



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>dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0650C03
          Length = 144337

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 125/151 (82%), Gaps = 9/151 (5%)
 Strand = Plus / Minus

                                                                          
Query: 295    tgctgatcgtaactgccataaccagagtatccatagt---tttgcatgctaggatcttgc 351
              ||||| |||||| ||||||| ||||| ||||||||||   |||||   |||||||| || 
Sbjct: 110669 tgctgttcgtaattgccatagccagaatatccatagtagttttgcgcactaggatcctgt 110610

                                                                          
Query: 352    gcattgggtgcaccatagt---aagcatcaggaccctgttgatatccatagtagctgttg 408
              |||||||||||||||||||   ||| ||||   |||||||| |||||||||||   ||||
Sbjct: 110609 gcattgggtgcaccatagtaagaagaatcatagccctgttggtatccatagta---gttg 110553

                                             
Query: 409    ccattaccctggtttgcatcctgctggggag 439
              ||||| | |||||| ||||||||||||||||
Sbjct: 110552 ccattccactggttggcatcctgctggggag 110522



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                                
Query: 534    cctgctggtaaattggacaaatccacaacgcttg 567
              |||||| |||||||||||||||||||||||||||
Sbjct: 110244 cctgctagtaaattggacaaatccacaacgcttg 110211



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                               
Query: 486    accaatctgagacccattcagcgcactgatggc 518
              |||||||||||||||||||||| ||| ||||||
Sbjct: 110387 accaatctgagacccattcagcacacggatggc 110355



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>gb|AY110342.1| Zea mays CL866_3 mRNA sequence
          Length = 853

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 93/114 (81%)
 Strand = Plus / Minus

                                                                       
Query: 454 ctacggccccatgaaagacgaacattggaactaccaatctgagacccattcagcgcactg 513
           ||||||||||||||||| ||||| ||    | ||||| ||||  ||||||||||   | |
Sbjct: 373 ctacggccccatgaaagccgaactttctgcccaccaacctgactcccattcagcattcgg 314

                                                                 
Query: 514 atggcctgctcagcgcacgccctgctggtaaattggacaaatccacaacgcttg 567
           ||||| | |||||| || | ||||||||||||||| |||||||||||| |||||
Sbjct: 313 atggcttcctcagcacatgacctgctggtaaattgaacaaatccacaatgcttg 260



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>gb|BT018852.1| Zea mays clone EL01N0555H08.d mRNA sequence
          Length = 1780

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 55/63 (87%), Gaps = 3/63 (4%)
 Strand = Plus / Minus

                                                                        
Query: 310  ccataaccagagtatccatagt---tttgcatgctaggatcttgcgcattgggtgcacca 366
            |||||||||| |||||||||||   |||| ||||| || ||||| |||||||||||||||
Sbjct: 1452 ccataaccagggtatccatagtagttttgaatgcttgggtcttgtgcattgggtgcacca 1393

               
Query: 367  tag 369
            |||
Sbjct: 1392 tag 1390



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                   
Query: 513  gatggcctgctcagcgcacgccctgctggtaaattggacaaatccacaacgcttg 567
            |||||| | |||||| || | ||||||||||||||| |||||||||||| |||||
Sbjct: 1234 gatggcttcctcagcacatgacctgctggtaaattgaacaaatccacaatgcttg 1180



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>gb|AY109669.1| Zea mays CL866_1 mRNA sequence
          Length = 1821

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 55/63 (87%), Gaps = 3/63 (4%)
 Strand = Plus / Minus

                                                                        
Query: 310  ccataaccagagtatccatagt---tttgcatgctaggatcttgcgcattgggtgcacca 366
            |||||||||| |||||||||||   |||| ||||| || ||||| |||||||||||||||
Sbjct: 1464 ccataaccagggtatccatagtagttttgaatgcttgggtcttgtgcattgggtgcacca 1405

               
Query: 367  tag 369
            |||
Sbjct: 1404 tag 1402



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                   
Query: 513  gatggcctgctcagcgcacgccctgctggtaaattggacaaatccacaacgcttg 567
            |||||| | |||||| || | ||||||||||||||| |||||||||||| |||||
Sbjct: 1246 gatggcttcctcagcacatgacctgctggtaaattgaacaaatccacaatgcttg 1192



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                 
Query: 328    tagttttgcatgctaggatcttgcgcattgggtgcaccatagtaagcatca 378
              ||||||||| |||||||||  || ||||| |||||||||||||| ||||||
Sbjct: 466107 tagttttgcgtgctaggatgctgtgcatttggtgcaccatagtatgcatca 466157



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>dbj|AP000616.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
             clone:P0514G12
          Length = 138929

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                
Query: 328   tagttttgcatgctaggatcttgcgcattgggtgcaccatagtaagcatca 378
             ||||||||| |||||||||  || ||||| |||||||||||||| ||||||
Sbjct: 11615 tagttttgcgtgctaggatgctgtgcatttggtgcaccatagtatgcatca 11665



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>dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0644B06
          Length = 194509

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                 
Query: 328    tagttttgcatgctaggatcttgcgcattgggtgcaccatagtaagcatca 378
              ||||||||| |||||||||  || ||||| |||||||||||||| ||||||
Sbjct: 176060 tagttttgcgtgctaggatgctgtgcatttggtgcaccatagtatgcatca 176110



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>gb|AC163036.2| Mus musculus BAC clone RP23-219G12 from chromosome 17, complete
             sequence
          Length = 217187

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 433   tggggaggctgtttgttttgg 453
             |||||||||||||||||||||
Sbjct: 34654 tggggaggctgtttgttttgg 34674



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>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence
          Length = 4837408

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 386     gttgatatccatagtagctgt 406
               |||||||||||||||||||||
Sbjct: 1899502 gttgatatccatagtagctgt 1899482



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>gb|AC151266.4| Mus musculus BAC clone RP24-279K24 from chromosome 17, complete
            sequence
          Length = 171074

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 433  tggggaggctgtttgttttgg 453
            |||||||||||||||||||||
Sbjct: 5270 tggggaggctgtttgttttgg 5250



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>gb|AC124421.4| Mus musculus BAC clone RP24-323H7 from chromosome 10, complete sequence
          Length = 187081

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 416    cctggtttgcatcctgctggggag 439
              |||||||| |||||||||||||||
Sbjct: 104882 cctggtttacatcctgctggggag 104905



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>dbj|AB234881.1| Trifolium pratense mRNA for putative DNA binding protein, complete
            cds
          Length = 3067

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 452  ggctacggccccatgaaagacgaacatt 479
            |||| |||||||||||||| ||||||||
Sbjct: 2650 ggcttcggccccatgaaagccgaacatt 2623



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 301      tcgtaactgccataaccagagtatccat 328
                |||||| ||||||||||| |||||||||
Sbjct: 21584840 tcgtaattgccataaccatagtatccat 21584867



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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 517     gcctgctcagcgcacgccct 536
               ||||||||||||||||||||
Sbjct: 3632477 gcctgctcagcgcacgccct 3632458



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 301      tcgtaactgccataaccagagtatccat 328
                |||||| ||||||||||| |||||||||
Sbjct: 21513161 tcgtaattgccataaccatagtatccat 21513188



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>emb|AL844497.4|CNS08CAU Oryza sativa chromosome 12, . BAC OSJNBa0085B23 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 158019

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 301   tcgtaactgccataaccagagtatccat 328
             |||||| ||||||||||| |||||||||
Sbjct: 61049 tcgtaattgccataaccatagtatccat 61022



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>gb|U31328.1|BDU31328 Blaberus discoidalis hexamerin subunit precursor mRNA, complete cds
          Length = 2346

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 396 atagtagctgttgccattac 415
           ||||||||||||||||||||
Sbjct: 969 atagtagctgttgccattac 950


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,905,650
Number of Sequences: 3902068
Number of extensions: 3905650
Number of successful extensions: 65312
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65138
Number of HSP's gapped (non-prelim): 161
length of query: 567
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 544
effective length of database: 17,143,297,704
effective search space: 9325953950976
effective search space used: 9325953950976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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