ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal7o10 |
|---|---|
| Clone Library Name | barley_pub |
>PMA1_WHEAT (P83970) Plasma membrane ATPase (EC 3.6.3.6) (Proton pump)| Length = 951 Score = 169 bits (427), Expect(2) = 8e-45 Identities = 85/89 (95%), Positives = 85/89 (95%) Frame = -1 Query: 610 KRTTAKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLR 431 K KGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLR Sbjct: 863 KENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLR 922 Query: 430 ELNTLKGHVESVVKLKGLDIDTINQNYTV 344 ELNTLKGHVESVVKLKGLDIDTINQNYTV Sbjct: 923 ELNTLKGHVESVVKLKGLDIDTINQNYTV 951 Score = 31.6 bits (70), Expect(2) = 8e-45 Identities = 13/13 (100%), Positives = 13/13 (100%) Frame = -3 Query: 632 NKTAFTTKENYGK 594 NKTAFTTKENYGK Sbjct: 856 NKTAFTTKENYGK 868
>PMA4_NICPL (Q03194) Plasma membrane ATPase 4 (EC 3.6.3.6) (Proton pump 4)| Length = 952 Score = 134 bits (338), Expect(2) = 1e-33 Identities = 70/89 (78%), Positives = 78/89 (87%) Frame = -1 Query: 610 KRTTAKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLR 431 K+ K EREAQWA AQRTLHGLQ PE + LFN+K+SYRELSEIAEQAKRRAE+ARLR Sbjct: 866 KKDYGKEEREAQWALAQRTLHGLQPPEATN--LFNEKNSYRELSEIAEQAKRRAEMARLR 923 Query: 430 ELNTLKGHVESVVKLKGLDIDTINQNYTV 344 EL+TLKGHVESVVKLKGLDI+TI Q+YTV Sbjct: 924 ELHTLKGHVESVVKLKGLDIETIQQHYTV 952 Score = 28.1 bits (61), Expect(2) = 1e-33 Identities = 11/13 (84%), Positives = 13/13 (100%) Frame = -3 Query: 632 NKTAFTTKENYGK 594 NKTAFTTK++YGK Sbjct: 859 NKTAFTTKKDYGK 871
>PMA5_ARATH (Q9SJB3) ATPase 5, plasma membrane-type (EC 3.6.3.6) (Proton pump 5)| Length = 948 Score = 130 bits (326), Expect(2) = 3e-32 Identities = 66/89 (74%), Positives = 75/89 (84%) Frame = -1 Query: 610 KRTTAKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLR 431 K+ K EREAQWA AQRTLHGLQ E + +FN+K+SY ELS+IAEQAKRRAE+ RLR Sbjct: 862 KKDYGKEEREAQWAAAQRTLHGLQPAE--KNNIFNEKNSYSELSQIAEQAKRRAEVVRLR 919 Query: 430 ELNTLKGHVESVVKLKGLDIDTINQNYTV 344 E+NTLKGHVESVVKLKGLDIDTI Q+YTV Sbjct: 920 EINTLKGHVESVVKLKGLDIDTIQQHYTV 948 Score = 28.1 bits (61), Expect(2) = 3e-32 Identities = 11/13 (84%), Positives = 13/13 (100%) Frame = -3 Query: 632 NKTAFTTKENYGK 594 NKTAFTTK++YGK Sbjct: 855 NKTAFTTKKDYGK 867
>PMA9_ARATH (Q42556) ATPase 9, plasma membrane-type (EC 3.6.3.6) (Proton pump 9)| Length = 954 Score = 126 bits (316), Expect(2) = 1e-30 Identities = 64/89 (71%), Positives = 75/89 (84%) Frame = -1 Query: 610 KRTTAKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLR 431 K+ KGEREAQWA AQRTLHGLQ + + +FNDKS+YRELSEIA+QAKRRAE+ARLR Sbjct: 868 KKDYGKGEREAQWAQAQRTLHGLQPAQTSD--MFNDKSTYRELSEIADQAKRRAEVARLR 925 Query: 430 ELNTLKGHVESVVKLKGLDIDTINQNYTV 344 E +TLKGHVESVVK KGLDI+ I Q+YT+ Sbjct: 926 ERHTLKGHVESVVKQKGLDIEAIQQHYTL 954 Score = 26.6 bits (57), Expect(2) = 1e-30 Identities = 10/13 (76%), Positives = 13/13 (100%) Frame = -3 Query: 632 NKTAFTTKENYGK 594 NKTAFT+K++YGK Sbjct: 861 NKTAFTSKKDYGK 873
>PMA6_ARATH (Q9SH76) ATPase 6, plasma membrane-type (EC 3.6.3.6) (Proton pump 6)| Length = 949 Score = 127 bits (318), Expect(2) = 1e-30 Identities = 63/89 (70%), Positives = 76/89 (85%) Frame = -1 Query: 610 KRTTAKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLR 431 K+ +GEREAQWA AQRTLHGL+ PE ++F D ++Y ELSEIAEQAK+RAE+ARLR Sbjct: 865 KKDYGRGEREAQWALAQRTLHGLKPPE----SMFEDTATYTELSEIAEQAKKRAEVARLR 920 Query: 430 ELNTLKGHVESVVKLKGLDIDTINQNYTV 344 E++TLKGHVESVVKLKGLDID +NQ+YTV Sbjct: 921 EVHTLKGHVESVVKLKGLDIDNLNQHYTV 949 Score = 25.8 bits (55), Expect(2) = 1e-30 Identities = 9/13 (69%), Positives = 13/13 (100%) Frame = -3 Query: 632 NKTAFTTKENYGK 594 N+TAFTTK++YG+ Sbjct: 858 NRTAFTTKKDYGR 870
>PMA8_ARATH (Q9M2A0) ATPase 8, plasma membrane-type (EC 3.6.3.6) (Proton pump 8)| Length = 948 Score = 124 bits (312), Expect(2) = 6e-30 Identities = 67/89 (75%), Positives = 73/89 (82%) Frame = -1 Query: 610 KRTTAKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLR 431 K+ KGEREAQWA AQRTLHGL PE +FND + ELSEIAEQAKRRAE+ARLR Sbjct: 866 KKDYGKGEREAQWALAQRTLHGLPPPE----AMFNDNKN--ELSEIAEQAKRRAEVARLR 919 Query: 430 ELNTLKGHVESVVKLKGLDIDTINQNYTV 344 EL+TLKGHVESVVKLKGLDIDTI Q+YTV Sbjct: 920 ELHTLKGHVESVVKLKGLDIDTIQQHYTV 948 Score = 25.8 bits (55), Expect(2) = 6e-30 Identities = 10/12 (83%), Positives = 12/12 (100%) Frame = -3 Query: 629 KTAFTTKENYGK 594 KTAFTTK++YGK Sbjct: 860 KTAFTTKKDYGK 871
>PMA1_ARATH (P20649) ATPase 1, plasma membrane-type (EC 3.6.3.6) (Proton pump 1)| Length = 948 Score = 124 bits (312), Expect(2) = 1e-29 Identities = 66/89 (74%), Positives = 72/89 (80%) Frame = -1 Query: 610 KRTTAKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLR 431 K+ GEREAQWA AQRTLHGLQ E + +F +K SYRELSEIAEQAKRRAEIARLR Sbjct: 862 KKDYGIGEREAQWAQAQRTLHGLQPKEDVN--IFPEKGSYRELSEIAEQAKRRAEIARLR 919 Query: 430 ELNTLKGHVESVVKLKGLDIDTINQNYTV 344 EL+TLKGHVESV KLKGLDIDT +YTV Sbjct: 920 ELHTLKGHVESVAKLKGLDIDTAGHHYTV 948 Score = 25.0 bits (53), Expect(2) = 1e-29 Identities = 9/12 (75%), Positives = 12/12 (100%) Frame = -3 Query: 632 NKTAFTTKENYG 597 N+TAFTTK++YG Sbjct: 855 NRTAFTTKKDYG 866
>PMA2_ARATH (P19456) ATPase 2, plasma membrane-type (EC 3.6.3.6) (Proton pump 2)| Length = 947 Score = 119 bits (299), Expect(2) = 2e-28 Identities = 66/89 (74%), Positives = 73/89 (82%) Frame = -1 Query: 610 KRTTAKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLR 431 K+ K EREAQWA AQRTLHGLQ E + +F +K SYRELSEIAEQAKRRAEIARLR Sbjct: 862 KKDYGKEEREAQWALAQRTLHGLQPKEAVN--IFPEKGSYRELSEIAEQAKRRAEIARLR 919 Query: 430 ELNTLKGHVESVVKLKGLDIDTINQNYTV 344 EL+TLKGHVESVVKLKGLDI+T +YTV Sbjct: 920 ELHTLKGHVESVVKLKGLDIET-PSHYTV 947 Score = 25.8 bits (55), Expect(2) = 2e-28 Identities = 10/13 (76%), Positives = 12/13 (92%) Frame = -3 Query: 632 NKTAFTTKENYGK 594 NKTAFT K++YGK Sbjct: 855 NKTAFTMKKDYGK 867
>PMA3_NICPL (Q08436) Plasma membrane ATPase 3 (EC 3.6.3.6) (Proton pump 3)| Length = 956 Score = 119 bits (297), Expect = 1e-26 Identities = 60/95 (63%), Positives = 76/95 (80%) Frame = -1 Query: 628 RLLSPPKRTTAKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRA 449 R+ K+ K +RE QWA AQRTLHGLQ P+P +F++ +++ EL+++AE+AKRRA Sbjct: 865 RIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDPK---IFSETTNFNELNQLAEEAKRRA 921 Query: 448 EIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 344 EIARLREL+TLKGHVESVVKLKGLDI+TI Q YTV Sbjct: 922 EIARLRELHTLKGHVESVVKLKGLDIETIQQAYTV 956
>PMA1_LYCES (P22180) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1)| Length = 956 Score = 118 bits (295), Expect = 2e-26 Identities = 60/95 (63%), Positives = 76/95 (80%) Frame = -1 Query: 628 RLLSPPKRTTAKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRA 449 R+ K+ K RE QWA AQRTLHGLQ P+P +F++ +++ EL+++AE+AKRRA Sbjct: 865 RIAFTRKKDFGKELRELQWAHAQRTLHGLQVPDPK---IFSETTNFNELNQLAEEAKRRA 921 Query: 448 EIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 344 EIARLREL+TLKGHVESVVKLKGLDI+TI Q+YTV Sbjct: 922 EIARLRELHTLKGHVESVVKLKGLDIETIQQSYTV 956
>PMA3_ARATH (P20431) ATPase 3, plasma membrane-type (EC 3.6.3.6) (Proton pump 3)| Length = 948 Score = 110 bits (275), Expect(2) = 4e-26 Identities = 61/82 (74%), Positives = 68/82 (82%) Frame = -1 Query: 589 EREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKG 410 EREAQWA AQRTLHGLQ E A+ + ++ YRELSEIA QAKRRAEIARLREL+TLKG Sbjct: 870 EREAQWAHAQRTLHGLQNTETAN--VVPERGGYRELSEIANQAKRRAEIARLRELHTLKG 927 Query: 409 HVESVVKLKGLDIDTINQNYTV 344 HVESVVKLKGLDI+T +YTV Sbjct: 928 HVESVVKLKGLDIETAG-HYTV 948 Score = 27.3 bits (59), Expect(2) = 4e-26 Identities = 10/12 (83%), Positives = 12/12 (100%) Frame = -3 Query: 632 NKTAFTTKENYG 597 N+TAFTTK+NYG Sbjct: 856 NRTAFTTKQNYG 867
>PMA1_NICPL (Q08435) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1)| Length = 957 Score = 116 bits (291), Expect = 5e-26 Identities = 60/95 (63%), Positives = 75/95 (78%) Frame = -1 Query: 628 RLLSPPKRTTAKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRA 449 R+ K+ K +RE QWA AQRTLHGLQ P+ LF++ +++ EL+++AE+AKRRA Sbjct: 866 RIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDTK---LFSEATNFNELNQLAEEAKRRA 922 Query: 448 EIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 344 EIARLREL+TLKGHVESVVKLKGLDI+TI Q YTV Sbjct: 923 EIARLRELHTLKGHVESVVKLKGLDIETIQQAYTV 957
>PMA2_LYCES (P23980) Plasma membrane ATPase 2 (EC 3.6.3.6) (Proton pump 2)| (Fragment) Length = 704 Score = 114 bits (286), Expect = 2e-25 Identities = 59/95 (62%), Positives = 75/95 (78%) Frame = -1 Query: 628 RLLSPPKRTTAKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRA 449 R+ K+ K +RE QWA AQRTLHGLQ P+ LF++ +++ EL+++AE+AKRRA Sbjct: 613 RIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDIK---LFSEATNFNELNQLAEEAKRRA 669 Query: 448 EIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 344 EIAR REL+TLKGHVESVVKLKGLDI+TI Q+YTV Sbjct: 670 EIARQRELHTLKGHVESVVKLKGLDIETIQQSYTV 704
>PMA11_ARATH (Q9LV11) ATPase 11, plasma membrane-type (EC 3.6.3.6) (Proton pump| 11) Length = 956 Score = 114 bits (285), Expect = 2e-25 Identities = 58/84 (69%), Positives = 71/84 (84%) Frame = -1 Query: 595 KGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTL 416 K +RE QWA AQRTLHGLQAP+ +F +++ + ELS++AE+AKRRAEIARLREL+TL Sbjct: 876 KEQRELQWAHAQRTLHGLQAPDAK---MFPERTHFNELSQMAEEAKRRAEIARLRELHTL 932 Query: 415 KGHVESVVKLKGLDIDTINQNYTV 344 KGHVESVV+LKGLDI+TI Q YTV Sbjct: 933 KGHVESVVRLKGLDIETIQQAYTV 956
>PMA4_ARATH (Q9SU58) ATPase 4, plasma membrane-type (EC 3.6.3.6) (Proton pump 4)| Length = 960 Score = 113 bits (283), Expect = 4e-25 Identities = 58/84 (69%), Positives = 70/84 (83%) Frame = -1 Query: 595 KGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTL 416 K +RE QWA AQRTLHGLQAP+ +F D++ EL+++AE+AKRRAEIARLREL+TL Sbjct: 880 KEQRELQWAHAQRTLHGLQAPDTK---MFTDRTHVSELNQMAEEAKRRAEIARLRELHTL 936 Query: 415 KGHVESVVKLKGLDIDTINQNYTV 344 KGHVESVV+LKGLDI+TI Q YTV Sbjct: 937 KGHVESVVRLKGLDIETIQQAYTV 960
>PMA7_ARATH (Q9LY32) ATPase 7, plasma membrane-type (EC 3.6.3.6) (Proton pump 7)| Length = 961 Score = 82.8 bits (203), Expect = 8e-16 Identities = 45/90 (50%), Positives = 61/90 (67%), Gaps = 1/90 (1%) Frame = -1 Query: 610 KRTTAKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLR 431 K+ + ER A WAT +RT HGL+ + + +++S EL+ +AE+AKRRAEIAR+R Sbjct: 876 KKNFGQEERMAAWATEKRTQHGLETGQKPVY----ERNSATELNNMAEEAKRRAEIARMR 931 Query: 430 ELNTLKGHVESVVKLKGLDIDTIN-QNYTV 344 EL TLKG VES KLKG D++ N NYT+ Sbjct: 932 ELQTLKGKVESAAKLKGYDLEDPNSNNYTI 961
>PMA10_ARATH (Q43128) ATPase 10, plasma membrane-type (EC 3.6.3.6) (Proton pump| 10) Length = 947 Score = 48.9 bits (115), Expect(2) = 1e-06 Identities = 26/53 (49%), Positives = 36/53 (67%) Frame = -1 Query: 502 KSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 344 + S S IAEQ +RRAEIARL E++++ H+ESV+KLK +D I +TV Sbjct: 895 RGSRSRASWIAEQTRRRAEIARLLEVHSVSRHLESVIKLKQIDQRMIRAAHTV 947 Score = 23.1 bits (48), Expect(2) = 1e-06 Identities = 9/12 (75%), Positives = 11/12 (91%) Frame = -3 Query: 629 KTAFTTKENYGK 594 KTAFT K++YGK Sbjct: 864 KTAFTYKKDYGK 875
>CING_HUMAN (Q9P2M7) Cingulin| Length = 1197 Score = 43.9 bits (102), Expect = 4e-04 Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 3/81 (3%) Frame = -1 Query: 583 EAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAE---IARLRELNTLK 413 E Q Q L +Q PEPA L D REL E + K+R E R REL LK Sbjct: 436 ETQVMELQNKLKHVQGPEPAKEVLLKDLLETRELLEEVLEGKQRVEEQLRLRERELTALK 495 Query: 412 GHVESVVKLKGLDIDTINQNY 350 G ++ V + +++ + Q Y Sbjct: 496 GALKEEVASRDQEVEHVRQQY 516
>PMA_AVESA (Q7M290) Plasma membrane ATPase (EC 3.6.3.6) (Proton pump)| (Fragments) Length = 110 Score = 43.9 bits (102), Expect = 4e-04 Identities = 26/38 (68%), Positives = 27/38 (71%) Frame = -1 Query: 571 ATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAK 458 A A +TLHGLQAPE S L NDK ELSEIAEQAK Sbjct: 77 APALKTLHGLQAPESTSLNLPNDK----ELSEIAEQAK 110
>CING_MOUSE (P59242) Cingulin| Length = 1191 Score = 34.3 bits (77), Expect = 0.32 Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 3/81 (3%) Frame = -1 Query: 583 EAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAE---IARLRELNTLK 413 EAQ Q L Q+P+ +L D REL E + K+R E R REL LK Sbjct: 430 EAQVKELQLKLKHSQSPDSGKESLLKDLLDTRELLEELLEGKQRVEEQLRLRERELTALK 489 Query: 412 GHVESVVKLKGLDIDTINQNY 350 G ++ V +++ + Y Sbjct: 490 GALKEEVASHDQEVEHVRLQY 510
>NOP12_ASHGO (Q75BJ7) Nucleolar protein 12| Length = 426 Score = 33.1 bits (74), Expect = 0.70 Identities = 23/76 (30%), Positives = 32/76 (42%) Frame = -1 Query: 622 LSPPKRTTAKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEI 443 L P KR + +E + A A+RT+ P H DK Y+E ++ Q K E Sbjct: 116 LKPSKRASRPDMKEEELAKAERTVFVGNVP----HEAITDKKVYKEFKQLVAQRKLSKED 171 Query: 442 ARLRELNTLKGHVESV 395 E K VES+ Sbjct: 172 EDDEEQKAEKYAVESI 187
>YE6A_SCHPO (O14256) Hypothetical protein C6G10.10c in chromosome I| Length = 194 Score = 31.2 bits (69), Expect = 2.7 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = -2 Query: 615 HQRELRQKVRGRHSGLPHREHSMAFKHLSRLPTHSST 505 H+R+ +++ R H HR H HLSR HS+T Sbjct: 135 HRRKEKERTRSNHRHGSHRRHEPYRTHLSRHHRHSTT 171
>ASPP2_HUMAN (Q13625) Apoptosis-stimulating of p53 protein 2 (Tumor suppressor| p53-binding protein 2) (p53-binding protein 2) (p53BP2) (53BP2) (Bcl2-binding protein) (Bbp) (NY-REN-51 antigen) Length = 1128 Score = 30.4 bits (67), Expect = 4.6 Identities = 20/72 (27%), Positives = 34/72 (47%) Frame = -1 Query: 571 ATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVV 392 AT ++ L L+ + ++ + L EIAE + A+L+++ LKGHVE Sbjct: 150 ATKEQRLKFLKQQDQRQQQQVAEQEKLKRLKEIAENQE-----AKLKKVRALKGHVEQKR 204 Query: 391 KLKGLDIDTINQ 356 G ++ I Q Sbjct: 205 LSNGKLVEEIEQ 216
>SMG_DROME (Q23972) Protein Smaug| Length = 999 Score = 30.0 bits (66), Expect = 6.0 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = -3 Query: 359 PKLHRVRNLGIGPNNMTSVLERDWNG 282 PK+H V+ G+GPNN ++ + WNG Sbjct: 769 PKMHHVKPAGVGPNN-GNINKPRWNG 793
>GCM2_MOUSE (O09102) Chorion-specific transcription factor GCMb (Glial cells| missing homolog 2) (GCM motif protein 2) (mGCMb) Length = 504 Score = 30.0 bits (66), Expect = 6.0 Identities = 15/61 (24%), Positives = 28/61 (45%) Frame = -1 Query: 553 LHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLD 374 +H PE S T + R+++ + KRR+E R ++GH+ S L+ + Sbjct: 156 VHDHPRPESKSETEGRRSALKRQMASFYQPQKRRSEEPEARSTQDIRGHLNSTAALEPTE 215 Query: 373 I 371 + Sbjct: 216 L 216
>TIM_MOUSE (Q9R1X4) Timeless homolog (mTim)| Length = 1197 Score = 29.6 bits (65), Expect = 7.8 Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 5/47 (10%) Frame = -3 Query: 401 VRGEAQGP*HRHHQPKLH-----RVRNLGIGPNNMTSVLERDWNGAP 276 V GE QGP H L R R G+GP + E +WN AP Sbjct: 1112 VPGE-QGPSEEHRTEALRALLSARKRKAGLGPTEEEATGEEEWNSAP 1157
>UN13D_HUMAN (Q70J99) Unc-13 homolog D (Munc13-4)| Length = 1090 Score = 29.6 bits (65), Expect = 7.8 Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 5/101 (4%) Frame = -1 Query: 622 LSPPKRTTAKGEREAQWATAQRT-LHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAE 446 + PP + +R + A T LH L PEP T ++ Y + + E + + Sbjct: 40 IQPPSHHFSPEQRALLYEDALYTVLHRLGHPEPNHVTEASELLRYLQEAFHVEPEEHQQT 99 Query: 445 IARLRELN----TLKGHVESVVKLKGLDIDTINQNYTV*GI 335 + R+REL LK V+ + G D+ + Y + GI Sbjct: 100 LQRVRELEKPIFCLKATVKQAKGILGKDVSGFSDPYCLLGI 140
>RNH2_SYNP7 (Q31PW0) Ribonuclease HII (EC 3.1.26.4) (RNase HII)| Length = 215 Score = 29.6 bits (65), Expect = 7.8 Identities = 16/48 (33%), Positives = 22/48 (45%) Frame = -2 Query: 585 GRHSGLPHREHSMAFKHLSRLPTHSSTTRAATVSFLRSLSKPREELRL 442 GRH G +H A L P H + FLRSL +P +++ L Sbjct: 174 GRHKGYGTAQHRQAILQLGPTPLH-------RIRFLRSLRQPSQQIDL 214
>RNH2_SYNP6 (Q5N4B8) Ribonuclease HII (EC 3.1.26.4) (RNase HII)| Length = 215 Score = 29.6 bits (65), Expect = 7.8 Identities = 16/48 (33%), Positives = 22/48 (45%) Frame = -2 Query: 585 GRHSGLPHREHSMAFKHLSRLPTHSSTTRAATVSFLRSLSKPREELRL 442 GRH G +H A L P H + FLRSL +P +++ L Sbjct: 174 GRHKGYGTAQHRQAILQLGPTPLH-------RIRFLRSLRQPSQQIDL 214
>ASPP2_MOUSE (Q8CG79) Apoptosis-stimulating of p53 protein 2 (Tumor suppressor| p53-binding protein 2) (p53BP2) (53BP2) (Fragment) Length = 1088 Score = 29.6 bits (65), Expect = 7.8 Identities = 20/72 (27%), Positives = 34/72 (47%) Frame = -1 Query: 571 ATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVV 392 AT ++ L L+ + ++ + L EIAE + A+L+++ LKGHVE Sbjct: 110 ATKEQRLKFLKQQDQRQQQQAAEQEKLKRLREIAESQE-----AKLKKVRALKGHVEQKR 164 Query: 391 KLKGLDIDTINQ 356 G ++ I Q Sbjct: 165 LSNGKLVEEIEQ 176 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 92,300,378 Number of Sequences: 219361 Number of extensions: 1894186 Number of successful extensions: 4735 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 4567 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4717 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5881538857 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
