>CECR6_MOUSE (Q99MX7) Cat eye syndrome critical region protein 6 homolog|
          Length = 572

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 30/112 (26%), Positives = 39/112 (34%), Gaps = 8/112 (7%)
 Frame = -3

Query: 389 DRXXTCAKXVVPTARCVKITPAKGGAHXSSTXVPLVHGXXXXXXXXXXQAGAPVLLRPLP 210
           D   + +K +VP A  +   PA+GG   S+T                  A          
Sbjct: 80  DESISISKPLVPAAAALPGPPAQGGVPVSATAPAAASSTSTPTSSCSMTAADFGAGAAAG 139

Query: 209 TSGG-GRRGATGDRPGRVVGLSSYCSRC-------NKLPRPSRRQGACP*EG 78
           T GG G R A G       G +S CS C        +  R  RR+G  P  G
Sbjct: 140 TVGGPGSRSAVGAGGTGTGGAASCCSCCCCCCGRPTRSGRRGRRRGCSPSPG 191

>IASPP_HUMAN (Q8WUF5) RelA-associated inhibitor (Inhibitor of ASPP protein)|
           (Protein iASPP) (PPP1R13B-like protein)
           (NFkB-interacting protein 1)
          Length = 828

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 22/64 (34%), Positives = 30/64 (46%)
 Frame = +1

Query: 10  PAKTRRILYSKPD**SYILQAA*PS*GHAPWRLDGLGSLLQRLQ*ELSPTTRPGRSPVAP 189
           P+  R  LY +PD    + +A  P     P   DG GS L R     +P+ RPG  P+  
Sbjct: 118 PSSPRTPLYLQPDAYGSLDRATSPR----PRAFDGAGSSLGR-----APSPRPGPGPLRQ 168

Query: 190 RRPP 201
           + PP
Sbjct: 169 QGPP 172

>CBX2_HUMAN (Q14781) Chromobox protein homolog 2|
          Length = 532

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +2

Query: 74  PSPPKGTRLGALTAWGVCY-SDCNKSSVLLRGQAGPPSPLAVRHLTSAAA 220
           P+P KGT  G + A G    +D +KS  L      PP+P + R     +A
Sbjct: 386 PAPGKGTGSGLIGASGATMPTDTSKSEKLASRAVAPPTPASKRDCVKGSA 435

>NGN2_MOUSE (P70447) Neurogenin 2 (Atonal protein homolog 4) (Helix-loop-helix|
           protein mATH-4A) (MATH4A)
          Length = 263

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = -3

Query: 203 GGGRRGATGDRPGRVVGLSSYCSRCNKLPRPSR 105
           G    GA G RPGR++GL   C R     RPSR
Sbjct: 65  GSPASGAGGCRPGRLLGLMHECKR-----RPSR 92

>MSBA_BURPS (Q63VX7) Lipid A export ATP-binding/permease protein msbA|
          Length = 596

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
 Frame = -3

Query: 287 LVHGXXXXXXXXXXQAGAPVLLRPLPTSGGGRRGATGDR---PGRVVGLS 147
           LV G          +AG P LL+PL   G G +G    +   P  VVGL+
Sbjct: 37  LVAGVLAMAAVAATEAGIPALLKPLLDHGFGSKGDMTTKLYVPAAVVGLA 86

>MSBA_BURMA (Q62IG3) Lipid A export ATP-binding/permease protein msbA|
          Length = 596

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
 Frame = -3

Query: 287 LVHGXXXXXXXXXXQAGAPVLLRPLPTSGGGRRGATGDR---PGRVVGLS 147
           LV G          +AG P LL+PL   G G +G    +   P  VVGL+
Sbjct: 37  LVAGVLAMAAVAATEAGIPALLKPLLDHGFGSKGDMTTKLYVPAAVVGLA 86


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,251,146
Number of Sequences: 219361
Number of extensions: 887104
Number of successful extensions: 3237
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3234
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)