ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal32j19 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009102.1| Triticum aestivum clone wkm2n.pk004.d7:fis, full insert mRNA sequence Length = 1221 Score = 198 bits (100), Expect = 1e-47 Identities = 224/255 (87%), Gaps = 13/255 (5%) Strand = Plus / Minus Query: 210 cggcagcggccttaggaggacgggcgcgcccgcttgttgttgccgctgccgctgccgcca 269 |||| |||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct: 964 cggcggcggccttaggaggacgggcgcgcccgcttgttgctgccgctgcc---gccgccg 908 Query: 270 ttgacgcccatgcacgaggggcacnttggtactgcttngatgagctccgcctttggccgg 329 ||| ||||||||||||| |||||| | ||||||||| |||| |||||||| |||||||| Sbjct: 907 ttggcgcccatgcacgacgggcactt--gtactgctt-gatgtgctccgcc-ttggccgg 852 Query: 330 cgtgatcttgacacaccttgccgtgggaaccactntcttagcacatgttcncanccgatc 389 ||||||||||||||| |||||||| ||||||||| || | ||||||| || || |||||| Sbjct: 851 cgtgatcttgacaca-cttgccgt-ggaaccact-tc-tcgcacatg-tcgcagccgatc 797 Query: 390 canaactcgtnctgcccgtagttgtccccacaggcgnccgcacancgtctccccgtgctc 449 || ||||||| ||||||||||||||||||||| ||| ||||||| ||| || |||||||| Sbjct: 796 cagaactcgtcctgcccgtagttgtccccacacgcg-ccgcacagcgtatcgccgtgctc 738 Query: 450 ttccccaccaccacc 464 ||| || |||||||| Sbjct: 737 ttctccgccaccacc 723 Score = 115 bits (58), Expect = 1e-22 Identities = 61/62 (98%) Strand = Plus / Minus Query: 10 ccagctaaaacaagaagaatcctctactcgaagccagattaataaagttacattttacaa 69 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1135 ccagctaaaataagaagaatcctctactcgaagccagattaataaagttacattttacaa 1076 Query: 70 gc 71 || Sbjct: 1075 gc 1074 Score = 99.6 bits (50), Expect = 8e-18 Identities = 67/72 (93%), Gaps = 3/72 (4%) Strand = Plus / Minus Query: 123 tttgttacagcgactgcaataagagctcagtcctactacgcggccaggccggtcccccgt 182 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct: 1038 tttgttacagcgactgcaataagagctcagtcctactacgcggcgaggccggtcg---gt 982 Query: 183 cgcccctcgccg 194 |||||||||||| Sbjct: 981 cgcccctcgccg 970
>ref|XM_479105.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1168 Score = 54.0 bits (27), Expect = 4e-04 Identities = 112/136 (82%), Gaps = 11/136 (8%) Strand = Plus / Minus Query: 226 aggacgggcgcgcccgcttgttgttgccgctgccgctgccgcca------ttgacgccca 279 ||||||||||||| |||||| |||||||||| ||| ||||||| ||| |||| Sbjct: 858 aggacgggcgcgcacgcttgccgttgccgctgacgccgccgccaccgccgttgccgccgc 799 Query: 280 tgcacgaggggcacnttggtactgcttngatgagctccgcctttggccggcgtgatcttg 339 |||| ||||||||| | ||||||||| |||| |||||||| |||||||| ||||||||| Sbjct: 798 tgcaggaggggcactt--gtactgctt-gatgtgctccgcc-ttggccggggtgatcttg 743 Query: 340 acacaccttgccgtgg 355 || || |||||||||| Sbjct: 742 acgca-cttgccgtgg 728
>gb|AC079038.3|AC079038 Oryza sativa chromosome 7 clone OSJNBb0024A20, complete sequence Length = 129838 Score = 54.0 bits (27), Expect = 4e-04 Identities = 112/136 (82%), Gaps = 11/136 (8%) Strand = Plus / Plus Query: 226 aggacgggcgcgcccgcttgttgttgccgctgccgctgccgcca------ttgacgccca 279 ||||||||||||| |||||| |||||||||| ||| ||||||| ||| |||| Sbjct: 125269 aggacgggcgcgcacgcttgccgttgccgctgacgccgccgccaccgccgttgccgccgc 125328 Query: 280 tgcacgaggggcacnttggtactgcttngatgagctccgcctttggccggcgtgatcttg 339 |||| ||||||||| | ||||||||| |||| |||||||| |||||||| ||||||||| Sbjct: 125329 tgcaggaggggcactt--gtactgctt-gatgtgctccgcc-ttggccggggtgatcttg 125384 Query: 340 acacaccttgccgtgg 355 || || |||||||||| Sbjct: 125385 acgca-cttgccgtgg 125399
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 54.0 bits (27), Expect = 4e-04 Identities = 112/136 (82%), Gaps = 11/136 (8%) Strand = Plus / Minus Query: 226 aggacgggcgcgcccgcttgttgttgccgctgccgctgccgcca------ttgacgccca 279 ||||||||||||| |||||| |||||||||| ||| ||||||| ||| |||| Sbjct: 24963884 aggacgggcgcgcacgcttgccgttgccgctgacgccgccgccaccgccgttgccgccgc 24963825 Query: 280 tgcacgaggggcacnttggtactgcttngatgagctccgcctttggccggcgtgatcttg 339 |||| ||||||||| | ||||||||| |||| |||||||| |||||||| ||||||||| Sbjct: 24963824 tgcaggaggggcactt--gtactgctt-gatgtgctccgcc-ttggccggggtgatcttg 24963769 Query: 340 acacaccttgccgtgg 355 || || |||||||||| Sbjct: 24963768 acgca-cttgccgtgg 24963754 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 250 tgccgctgccgctgccgccattg 272 ||||||||||||||||||||||| Sbjct: 2068127 tgccgctgccgctgccgccattg 2068149 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 gttgccgctgccgctgccgc 267 |||||||||||||||||||| Sbjct: 3520800 gttgccgctgccgctgccgc 3520819 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 gccgctgccgctgccgccat 270 |||||||||||||||||||| Sbjct: 1711543 gccgctgccgctgccgccat 1711524
>dbj|AP006458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0072I06 Length = 162411 Score = 54.0 bits (27), Expect = 4e-04 Identities = 112/136 (82%), Gaps = 11/136 (8%) Strand = Plus / Minus Query: 226 aggacgggcgcgcccgcttgttgttgccgctgccgctgccgcca------ttgacgccca 279 ||||||||||||| |||||| |||||||||| ||| ||||||| ||| |||| Sbjct: 147516 aggacgggcgcgcacgcttgccgttgccgctgacgccgccgccaccgccgttgccgccgc 147457 Query: 280 tgcacgaggggcacnttggtactgcttngatgagctccgcctttggccggcgtgatcttg 339 |||| ||||||||| | ||||||||| |||| |||||||| |||||||| ||||||||| Sbjct: 147456 tgcaggaggggcactt--gtactgctt-gatgtgctccgcc-ttggccggggtgatcttg 147401 Query: 340 acacaccttgccgtgg 355 || || |||||||||| Sbjct: 147400 acgca-cttgccgtgg 147386
>dbj|AP005895.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0018L13 Length = 131155 Score = 54.0 bits (27), Expect = 4e-04 Identities = 112/136 (82%), Gaps = 11/136 (8%) Strand = Plus / Minus Query: 226 aggacgggcgcgcccgcttgttgttgccgctgccgctgccgcca------ttgacgccca 279 ||||||||||||| |||||| |||||||||| ||| ||||||| ||| |||| Sbjct: 4564 aggacgggcgcgcacgcttgccgttgccgctgacgccgccgccaccgccgttgccgccgc 4505 Query: 280 tgcacgaggggcacnttggtactgcttngatgagctccgcctttggccggcgtgatcttg 339 |||| ||||||||| | ||||||||| |||| |||||||| |||||||| ||||||||| Sbjct: 4504 tgcaggaggggcactt--gtactgctt-gatgtgctccgcc-ttggccggggtgatcttg 4449 Query: 340 acacaccttgccgtgg 355 || || |||||||||| Sbjct: 4448 acgca-cttgccgtgg 4434
>dbj|AK109447.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-104-H11, full insert sequence Length = 1220 Score = 54.0 bits (27), Expect = 4e-04 Identities = 112/136 (82%), Gaps = 11/136 (8%) Strand = Plus / Minus Query: 226 aggacgggcgcgcccgcttgttgttgccgctgccgctgccgcca------ttgacgccca 279 ||||||||||||| |||||| |||||||||| ||| ||||||| ||| |||| Sbjct: 910 aggacgggcgcgcacgcttgccgttgccgctgacgccgccgccaccgccgttgccgccgc 851 Query: 280 tgcacgaggggcacnttggtactgcttngatgagctccgcctttggccggcgtgatcttg 339 |||| ||||||||| | ||||||||| |||| |||||||| |||||||| ||||||||| Sbjct: 850 tgcaggaggggcactt--gtactgctt-gatgtgctccgcc-ttggccggggtgatcttg 795 Query: 340 acacaccttgccgtgg 355 || || |||||||||| Sbjct: 794 acgca-cttgccgtgg 780
>ref|XM_476587.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1571 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgccattg 272 ||||||||||||||||||||||| Sbjct: 768 tgccgctgccgctgccgccattg 746
>ref|NM_005796.1| Homo sapiens nuclear transport factor 2 (NUTF2), mRNA Length = 894 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 248 gttgccgctgccgctgccgccat 270 ||||||||||||||||||||||| Sbjct: 32 gttgccgctgccgctgccgccat 54
>ref|XM_806174.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511131.80) partial mRNA Length = 4794 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgccattg 272 ||||||||||||||||||||||| Sbjct: 178 tgccgctgccgctgccgccattg 156
>emb|CR859788.1| Pongo pygmaeus mRNA; cDNA DKFZp468O049 (from clone DKFZp468O049) Length = 943 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 248 gttgccgctgccgctgccgccat 270 ||||||||||||||||||||||| Sbjct: 13 gttgccgctgccgctgccgccat 35
>gb|AC129312.6| Mus musculus BAC clone RP24-405K6 from chromosome 1, complete sequence Length = 197135 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 243 ttgttgttgccgctgccgctgcc 265 ||||||||||||||||||||||| Sbjct: 55512 ttgttgttgccgctgccgctgcc 55534
>emb|CR621534.1| full-length cDNA clone CS0DI061YF17 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 2071 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 248 gttgccgctgccgctgccgccat 270 ||||||||||||||||||||||| Sbjct: 3 gttgccgctgccgctgccgccat 25
>emb|CR621393.1| full-length cDNA clone CS0DJ008YC04 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 887 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 248 gttgccgctgccgctgccgccat 270 ||||||||||||||||||||||| Sbjct: 33 gttgccgctgccgctgccgccat 55
>emb|CR611844.1| full-length cDNA clone CS0DL007YO12 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1409 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 248 gttgccgctgccgctgccgccat 270 ||||||||||||||||||||||| Sbjct: 10 gttgccgctgccgctgccgccat 32
>emb|CR605590.1| full-length cDNA clone CS0DB003YI04 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 882 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 248 gttgccgctgccgctgccgccat 270 ||||||||||||||||||||||| Sbjct: 21 gttgccgctgccgctgccgccat 43
>gb|AC040162.5| Homo sapiens chromosome 16 clone CTC-479C5, complete sequence Length = 217470 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 248 gttgccgctgccgctgccgccat 270 ||||||||||||||||||||||| Sbjct: 168930 gttgccgctgccgctgccgccat 168908
>dbj|AP004314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0495H05 Length = 205595 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 250 tgccgctgccgctgccgccattg 272 ||||||||||||||||||||||| Sbjct: 152424 tgccgctgccgctgccgccattg 152446
>dbj|AK111433.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-H10, full insert sequence Length = 1571 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgccattg 272 ||||||||||||||||||||||| Sbjct: 768 tgccgctgccgctgccgccattg 746
>gb|BC002348.2| Homo sapiens nuclear transport factor 2, mRNA (cDNA clone MGC:8327 IMAGE:2819267), complete cds Length = 896 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 248 gttgccgctgccgctgccgccat 270 ||||||||||||||||||||||| Sbjct: 27 gttgccgctgccgctgccgccat 49
>dbj|AP003829.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1417_E01 Length = 118058 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 250 tgccgctgccgctgccgccattg 272 ||||||||||||||||||||||| Sbjct: 23920 tgccgctgccgctgccgccattg 23942
>emb|X07315.1|HSPP15 Human gene for PP15 (placental protein 15) Length = 894 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 248 gttgccgctgccgctgccgccat 270 ||||||||||||||||||||||| Sbjct: 32 gttgccgctgccgctgccgccat 54
>gb|BT016039.1| Drosophila melanogaster LP21705 full insert cDNA Length = 3060 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 243 ttgttgttgccgctgccgctgc 264 |||||||||||||||||||||| Sbjct: 248 ttgttgttgccgctgccgctgc 227
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 248 gttgccgctgccgctgccgcca 269 |||||||||||||||||||||| Sbjct: 2340323 gttgccgctgccgctgccgcca 2340302
>gb|BC004377.1| Homo sapiens Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2, mRNA (cDNA clone MGC:10574 IMAGE:3640855), complete cds Length = 1903 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 247 tgttgccgctgccgctgccgcc 268 |||||||||||||||||||||| Sbjct: 800 tgttgccgctgccgctgccgcc 779
>ref|NM_006079.3| Homo sapiens Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 (CITED2), mRNA Length = 1930 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 247 tgttgccgctgccgctgccgcc 268 |||||||||||||||||||||| Sbjct: 845 tgttgccgctgccgctgccgcc 824
>emb|BX649247.9| Zebrafish DNA sequence from clone DKEY-181C10 in linkage group 15, complete sequence Length = 194916 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 243 ttgttgttgccgctgccgctgccgcc 268 |||||||||||||||| ||||||||| Sbjct: 189504 ttgttgttgccgctgctgctgccgcc 189529
>emb|AL592429.6| Human DNA sequence from clone RP11-12A2 on chromosome 6 Contains a DnaJ (Hsp40) homolog subfamily C member 7 (DNAJC7) pseudogene, the CITED2 gene for Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 2 (MRG1, P35SRJ) and a putative novel gene. Contains two CpG islands, complete sequence Length = 167460 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 247 tgttgccgctgccgctgccgcc 268 |||||||||||||||||||||| Sbjct: 36305 tgttgccgctgccgctgccgcc 36326
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 248 gttgccgctgccgctgccgcca 269 |||||||||||||||||||||| Sbjct: 1037331 gttgccgctgccgctgccgcca 1037352
>ref|NM_206713.1| Drosophila melanogaster CG14411-RB, transcript variant B (CG14411), mRNA Length = 3435 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 243 ttgttgttgccgctgccgctgc 264 |||||||||||||||||||||| Sbjct: 274 ttgttgttgccgctgccgctgc 253
>gb|AY095192.1| Drosophila melanogaster LD41575 full insert cDNA Length = 3452 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 243 ttgttgttgccgctgccgctgc 264 |||||||||||||||||||||| Sbjct: 265 ttgttgttgccgctgccgctgc 244
>ref|NM_132744.1| Drosophila melanogaster CG14411-RA, transcript variant A (CG14411), mRNA Length = 3450 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 243 ttgttgttgccgctgccgctgc 264 |||||||||||||||||||||| Sbjct: 274 ttgttgttgccgctgccgctgc 253
>gb|AC022344.2|AC022344 Drosophila melanogaster, chromosome X, region 12F-13A, BAC clone BACR30H22, complete sequence Length = 157308 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 243 ttgttgttgccgctgccgctgc 264 |||||||||||||||||||||| Sbjct: 55386 ttgttgttgccgctgccgctgc 55365
>gb|AC079818.56| Mus musculus strain C57BL/6J chromosome 10 clone rp23-362c8, complete sequence Length = 238658 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 446 gctcttccccaccaccaccccc 467 |||||||||||||||||||||| Sbjct: 120864 gctcttccccaccaccaccccc 120885
>gb|AY892169.1| Synthetic construct Homo sapiens clone FLH016597.01L Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 2 (CITED2) mRNA, partial cds Length = 813 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 247 tgttgccgctgccgctgccgcc 268 |||||||||||||||||||||| Sbjct: 601 tgttgccgctgccgctgccgcc 580
>gb|AY889713.1| Synthetic construct Homo sapiens clone FLH016601.01X Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 2 (CITED2) mRNA, complete cds Length = 813 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 247 tgttgccgctgccgctgccgcc 268 |||||||||||||||||||||| Sbjct: 601 tgttgccgctgccgctgccgcc 580
>gb|AF129290.1|AF129290 Homo sapiens p35srj gene, alternatively spliced product and complete cds Length = 6324 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 247 tgttgccgctgccgctgccgcc 268 |||||||||||||||||||||| Sbjct: 4647 tgttgccgctgccgctgccgcc 4626
>gb|AE003497.3| Drosophila melanogaster chromosome X, section 49 of 74 of the complete sequence Length = 275651 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 243 ttgttgttgccgctgccgctgc 264 |||||||||||||||||||||| Sbjct: 45055 ttgttgttgccgctgccgctgc 45034
>gb|AF109161.1|AF109161 Homo sapiens p35srj (MRG1) mRNA, complete cds Length = 1919 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 247 tgttgccgctgccgctgccgcc 268 |||||||||||||||||||||| Sbjct: 817 tgttgccgctgccgctgccgcc 796
>ref|XM_479991.1| Oryza sativa (japonica cultivar-group), mRNA Length = 715 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgccat 270 ||||||||||||||||||||| Sbjct: 137 tgccgctgccgctgccgccat 117
>ref|XM_507126.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1613_G04.25 mRNA Length = 916 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgccat 270 ||||||||||||||||||||| Sbjct: 311 tgccgctgccgctgccgccat 291
>ref|XM_463418.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1362 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 gttgccgctgccgctgccgcc 268 ||||||||||||||||||||| Sbjct: 516 gttgccgctgccgctgccgcc 496
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 247 tgttgccgctgccgctgccgc 267 ||||||||||||||||||||| Sbjct: 186429 tgttgccgctgccgctgccgc 186449
>gb|AY022132.1| Oryza sativa microsatellite MRG4457 containing (TC)X18, closest to marker C905, genomic sequence Length = 236 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgccat 270 ||||||||||||||||||||| Sbjct: 209 tgccgctgccgctgccgccat 189
>gb|AC008224.19| Drosophila melanogaster clone BACR29J02, complete sequence Length = 181633 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 241 gcttgttgttgccgctgccgc 261 ||||||||||||||||||||| Sbjct: 85700 gcttgttgttgccgctgccgc 85680
>ref|XM_324221.1| Neurospora crassa OR74A hypothetical protein (NCU04865.1) partial mRNA Length = 7725 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 447 ctcttccccaccaccaccccc 467 ||||||||||||||||||||| Sbjct: 7694 ctcttccccaccaccaccccc 7674
>ref|XM_954029.1| Neurospora crassa OR74A hypothetical protein (NCU04865.1) partial mRNA Length = 7725 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 447 ctcttccccaccaccaccccc 467 ||||||||||||||||||||| Sbjct: 7694 ctcttccccaccaccaccccc 7674
>ref|XM_805497.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508911.60) partial mRNA Length = 4503 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 248 gttgccgctgccgctgccgcc 268 ||||||||||||||||||||| Sbjct: 202 gttgccgctgccgctgccgcc 222
>ref|XM_810543.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510055.100) partial mRNA Length = 4512 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 248 gttgccgctgccgctgccgcc 268 ||||||||||||||||||||| Sbjct: 208 gttgccgctgccgctgccgcc 228
>ref|XM_815495.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506855.310) partial mRNA Length = 4665 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 248 gttgccgctgccgctgccgccattg 272 ||||| ||||||||||||||||||| Sbjct: 57 gttgctgctgccgctgccgccattg 33
>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16 Length = 348642 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 223 aggaggacgggcgcgcccgct 243 ||||||||||||||||||||| Sbjct: 176616 aggaggacgggcgcgcccgct 176596
>emb|BX640413.1| Bordetella pertussis strain Tohama I, complete genome; segment 3/12 Length = 349028 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 223 aggaggacgggcgcgcccgct 243 ||||||||||||||||||||| Sbjct: 241962 aggaggacgggcgcgcccgct 241982
>gb|AY046510.1| Adenoviral expression vector Ad-hiNOS, complete sequence Length = 35764 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 244 tgttgttgccgctgccgctgccgcc 268 ||||| ||||||||||||||||||| Sbjct: 28458 tgttgctgccgctgccgctgccgcc 28434
>gb|AF369965.1|AF369965 Cloning vector pHelper, complete sequence Length = 11635 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 244 tgttgttgccgctgccgctgccgcc 268 ||||| ||||||||||||||||||| Sbjct: 4559 tgttgctgccgctgccgctgccgcc 4535
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgccat 270 ||||||||||||||||||||| Sbjct: 2109649 tgccgctgccgctgccgccat 2109629
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 gttgccgctgccgctgccgcc 268 ||||||||||||||||||||| Sbjct: 28829067 gttgccgctgccgctgccgcc 28829047 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 ccccgtcgcccctcgccgtc 196 |||||||||||||||||||| Sbjct: 41327725 ccccgtcgcccctcgccgtc 41327706
>gb|AF323988.1|AF323988 EGFP expression vector Ad-EGFP, complete sequence Length = 33007 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 244 tgttgttgccgctgccgctgccgcc 268 ||||| ||||||||||||||||||| Sbjct: 25701 tgttgctgccgctgccgctgccgcc 25677
>gb|AC009349.6|AC009349 Drosophila melanogaster, chromosome 3R, region 100C-100C, BAC clone BACR10O09, complete sequence Length = 165555 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 tgttgttgccgctgccgctgc 264 ||||||||||||||||||||| Sbjct: 15039 tgttgttgccgctgccgctgc 15059
>gb|AC008287.4|AC008287 Drosophila melanogaster, chromosome 3R, region 100C-100C, BAC clone BACR02G16, complete sequence Length = 177480 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 tgttgttgccgctgccgctgc 264 ||||||||||||||||||||| Sbjct: 104969 tgttgttgccgctgccgctgc 104989
>gb|AF210616.1|AF210616 Zea mays P2 protein (P2) gene, complete cds Length = 12634 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 247 tgttgccgctgccgctgccgc 267 ||||||||||||||||||||| Sbjct: 9558 tgttgccgctgccgctgccgc 9578
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 244 tgttgttgccgctgccgctgccgcc 268 ||||| ||||||||||||||||||| Sbjct: 6867405 tgttgctgccgctgccgctgccgcc 6867429 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 245 gttgttgccgctgccgctgccgcc 268 ||||||||||||| |||||||||| Sbjct: 3952040 gttgttgccgctgtcgctgccgcc 3952063
>dbj|AP003373.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1116_H09 Length = 110086 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 gttgccgctgccgctgccgcc 268 ||||||||||||||||||||| Sbjct: 47110 gttgccgctgccgctgccgcc 47090
>dbj|AP003896.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1613_G04 Length = 135357 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgccat 270 ||||||||||||||||||||| Sbjct: 103179 tgccgctgccgctgccgccat 103159
>dbj|AB177546.1| Musca domestica MdGluCl mRNA for glutamate-gated chloride channel subunit, complete cds Length = 2451 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 448 tcttccccaccaccacccccc 468 ||||||||||||||||||||| Sbjct: 1872 tcttccccaccaccacccccc 1892
>dbj|AK120571.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134F16, full insert sequence Length = 715 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgccat 270 ||||||||||||||||||||| Sbjct: 137 tgccgctgccgctgccgccat 117
>dbj|AP003157.2| Mus musculus genomic DNA, chromosome 16q clone:RP21-617H16, complete sequence Length = 31510 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 244 tgttgttgccgctgccgctgccgcc 268 ||||| ||||||||||||||||||| Sbjct: 16773 tgttggtgccgctgccgctgccgcc 16797
>dbj|AK066535.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013068C11, full insert sequence Length = 914 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgccat 270 ||||||||||||||||||||| Sbjct: 309 tgccgctgccgctgccgccat 289
>gb|AY702552.1| Zea mays Myb-like transcription factor P1 (P1) gene, P1-rw1077 allele, complete cds Length = 22270 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 247 tgttgccgctgccgctgccgc 267 ||||||||||||||||||||| Sbjct: 14703 tgttgccgctgccgctgccgc 14723
>dbj|AK061435.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-A09, full insert sequence Length = 1641 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 gttgccgctgccgctgccgcc 268 ||||||||||||||||||||| Sbjct: 568 gttgccgctgccgctgccgcc 548
>dbj|AK060038.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-B02, full insert sequence Length = 1215 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 gttgccgctgccgctgccgcc 268 ||||||||||||||||||||| Sbjct: 172 gttgccgctgccgctgccgcc 152
>gb|AE003778.3| Drosophila melanogaster chromosome 3R, section 116 of 118 of the complete sequence Length = 225974 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 tgttgttgccgctgccgctgc 264 ||||||||||||||||||||| Sbjct: 87236 tgttgttgccgctgccgctgc 87256
>gb|AE003600.4| Drosophila melanogaster chromosome 3R, section 8 of 118 of the complete sequence Length = 292632 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 241 gcttgttgttgccgctgccgc 261 ||||||||||||||||||||| Sbjct: 43644 gcttgttgttgccgctgccgc 43664
>gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence Length = 184425 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 247 tgttgccgctgccgctgccgc 267 ||||||||||||||||||||| Sbjct: 121730 tgttgccgctgccgctgccgc 121750
>emb|CT030190.9| Mouse DNA sequence from clone RP23-115D20 on chromosome 16, complete sequence Length = 228196 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 244 tgttgttgccgctgccgctgccgcc 268 ||||| ||||||||||||||||||| Sbjct: 109730 tgttggtgccgctgccgctgccgcc 109754
>gb|M73260.1|ADRCOMPGEN Mastadenovirus h5 gene, complete genome Length = 35935 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 244 tgttgttgccgctgccgctgccgcc 268 ||||| ||||||||||||||||||| Sbjct: 26750 tgttgctgccgctgccgctgccgcc 26726
>gb|J01917.1|ADRCG Adenovirus type 2, complete genome Length = 35937 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 244 tgttgttgccgctgccgctgccgcc 268 ||||| ||||||||||||||||||| Sbjct: 26791 tgttgctgccgctgccgctgccgcc 26767
>gb|AY219172.2| Fusarium oxysporum f. sp. lycopersici G protein beta subunit (fgb1) gene, complete cds Length = 3947 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 ttgttgccgctgccgctgcc 265 |||||||||||||||||||| Sbjct: 830 ttgttgccgctgccgctgcc 849
>ref|XM_631335.1| Dictyostelium discoideum hypothetical protein (DDB0188214), partial mRNA Length = 2751 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 244 tgttgttgccgctgccgctgccgc 267 ||||||||| |||||||||||||| Sbjct: 475 tgttgttgctgctgccgctgccgc 452
>ref|NM_189705.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1587 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 ccccgtcgcccctcgccgtc 196 |||||||||||||||||||| Sbjct: 685 ccccgtcgcccctcgccgtc 666
>ref|XM_476521.1| Oryza sativa (japonica cultivar-group), mRNA Length = 978 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 gccgctgccgctgccgccat 270 |||||||||||||||||||| Sbjct: 251 gccgctgccgctgccgccat 232
>gb|U72484.1| Fugu rubripes RNA helicase (RNA-H) gene, partial cds; calcium channel beta3 subunit (CAB3B), adenylyl cyclase type VI (AC-VI), glucose-6-phosphate dehydrogenase (G6PD), and L-glycerol-3-phosphate (LG3P) genes, complete cds; and sodium channel 2 (BNaC2) gene, partial cds Length = 61901 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 60239 tgccgctgccgctgccgcca 60220
>gb|AC115937.14| Mus musculus chromosome 5, clone RP24-547J21, complete sequence Length = 215400 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 cttccccaccaccacccccc 468 |||||||||||||||||||| Sbjct: 130345 cttccccaccaccacccccc 130364
>gb|AC007890.6| Drosophila melanogaster clone BACR02G21, complete sequence Length = 171563 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 gttgttgccgctgccgctgc 264 |||||||||||||||||||| Sbjct: 131930 gttgttgccgctgccgctgc 131911
>gb|BC078853.1| Rattus norvegicus phosphoribosyl pyrophosphate synthetase 1, mRNA (cDNA clone MGC:93512 IMAGE:7190069), complete cds Length = 1503 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 ttgccgctgccgctgccgcc 268 |||||||||||||||||||| Sbjct: 82 ttgccgctgccgctgccgcc 63
>ref|XM_599430.2| PREDICTED: Bos taurus similar to CG2698-PA (LOC521172), mRNA Length = 2898 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 ttgccgctgccgctgccgcc 268 |||||||||||||||||||| Sbjct: 290 ttgccgctgccgctgccgcc 271
>gb|AC009736.10| Drosophila melanogaster clone BACR10A04, complete sequence Length = 165489 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 gttgttgccgctgccgctgc 264 |||||||||||||||||||| Sbjct: 13190 gttgttgccgctgccgctgc 13171
>ref|XM_367496.1| Magnaporthe grisea 70-15 chromosome III predicted protein (MG07407.4) partial mRNA Length = 792 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 ttgttgttgccgctgccgct 262 |||||||||||||||||||| Sbjct: 50 ttgttgttgccgctgccgct 69
>ref|NM_198683.1| Mus musculus CUG triplet repeat, RNA binding protein 1 (Cugbp1), transcript variant 2, mRNA Length = 2197 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 61 tgccgctgccgctgccgcca 42
>ref|NM_017368.2| Mus musculus CUG triplet repeat, RNA binding protein 1 (Cugbp1), transcript variant 1, mRNA Length = 2349 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 61 tgccgctgccgctgccgcca 42
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 1155565 tgccgctgccgctgccgcca 1155584
>gb|DQ356948.1| Crocodilepox virus, complete genome Length = 190054 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 ttgccgctgccgctgccgcc 268 |||||||||||||||||||| Sbjct: 174502 ttgccgctgccgctgccgcc 174521
>ref|NM_183298.1| Mus musculus forkhead box E1 (thyroid transcription factor 2) (Foxe1), mRNA Length = 1116 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 gccgctgccgctgccgccat 270 |||||||||||||||||||| Sbjct: 511 gccgctgccgctgccgccat 530
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 cgctgccgctgccgccattg 272 |||||||||||||||||||| Sbjct: 6068170 cgctgccgctgccgccattg 6068151
>gb|AC161371.4| Mus musculus BAC clone RP23-402N3 from chromosome 9, complete sequence Length = 203708 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 cttccccaccaccacccccc 468 |||||||||||||||||||| Sbjct: 194227 cttccccaccaccacccccc 194246
>ref|XM_988929.1| PREDICTED: Mus musculus RIKEN cDNA D130043K22 gene, transcript variant 2 (D130043K22Rik), mRNA Length = 4977 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 4579 tgccgctgccgctgccgcca 4560
>ref|XM_001003788.1| PREDICTED: Mus musculus gene model 920, (NCBI) (Gm920), mRNA Length = 7746 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 2244 tgccgctgccgctgccgcca 2225
>ref|XM_354882.4| PREDICTED: Mus musculus gene model 920, (NCBI) (Gm920), mRNA Length = 7023 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 2244 tgccgctgccgctgccgcca 2225
>ref|XM_908398.2| PREDICTED: Mus musculus RIKEN cDNA D130043K22 gene, transcript variant 4 (D130043K22Rik), mRNA Length = 4977 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 4579 tgccgctgccgctgccgcca 4560
>ref|XM_111397.5| PREDICTED: Mus musculus RIKEN cDNA D130043K22 gene, transcript variant 1 (D130043K22Rik), mRNA Length = 4977 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 4579 tgccgctgccgctgccgcca 4560
>gb|AC073258.9| Homo sapiens BAC clone RP11-221B19 from 7, complete sequence Length = 156127 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 cagctaaaacaagaagaatc 30 |||||||||||||||||||| Sbjct: 106004 cagctaaaacaagaagaatc 106023
>ref|XM_753995.1| Ustilago maydis 521 hypothetical protein (UM02941.1) partial mRNA Length = 3111 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 gttgccgctgccgctgccgc 267 |||||||||||||||||||| Sbjct: 1844 gttgccgctgccgctgccgc 1825
>ref|XM_750804.1| Aspergillus fumigatus Af293 C6 transcription factor (Afu2g15620) partial mRNA Length = 2865 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 501 tgccgctgccgctgccgcca 520
>gb|AC122354.4| Mus musculus BAC clone RP23-401A2 from chromosome 12, complete sequence Length = 192581 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 ataaagttacattttacaag 70 |||||||||||||||||||| Sbjct: 112352 ataaagttacattttacaag 112333
>gb|DQ146932.1| Sclerotinia sclerotiorum putative protein gene, complete cds Length = 4423 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 1540 tgccgctgccgctgccgcca 1559
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome Length = 3059876 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 1460334 tgccgctgccgctgccgcca 1460315
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 4926026 tgccgctgccgctgccgcca 4926045
>emb|AL356475.11| Human DNA sequence from clone RP11-332H17 on chromosome 1 Contains the 5' end of the KIFAP3 gene for kinesin-associated protein 3 and a novel gene, complete sequence Length = 108047 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 gccgctgccgctgccgccat 270 |||||||||||||||||||| Sbjct: 67885 gccgctgccgctgccgccat 67866
>emb|AL096677.21|HSJ322G13 Human DNA sequence from clone RP3-322G13 on chromosome 20p11.21-12.3 Contains the gene for NTF2-related export protein (NXT1), the ZNF336 gene for zinc finger protein 336, two putative novel genes, the NAPB gene for N-ethylmaleimide-sensitive factor attachment protein beta, the CSTL1 gene for cystatin-like 1, the CST11 gene for cystatin 11 and six CpG islands, complete sequence Length = 112180 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 agattaataaagttacattt 64 |||||||||||||||||||| Sbjct: 81071 agattaataaagttacattt 81052
>gb|AC164068.2| Mus musculus chromosome 1, clone RP23-5H15, complete sequence Length = 178006 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 139782 tgccgctgccgctgccgcca 139763
>ref|NM_014970.2| Homo sapiens kinesin-associated protein 3 (KIFAP3), mRNA Length = 2997 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 gccgctgccgctgccgccat 270 |||||||||||||||||||| Sbjct: 254 gccgctgccgctgccgccat 273
>gb|BC048012.1| Homo sapiens kinesin-associated protein 3, mRNA (cDNA clone IMAGE:5301903) Length = 2917 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 gccgctgccgctgccgccat 270 |||||||||||||||||||| Sbjct: 298 gccgctgccgctgccgccat 317
>gb|BC028679.2| Homo sapiens kinesin-associated protein 3, mRNA (cDNA clone MGC:26126 IMAGE:4829354), complete cds Length = 2968 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 gccgctgccgctgccgccat 270 |||||||||||||||||||| Sbjct: 211 gccgctgccgctgccgccat 230
>emb|AJ457047.2|MMU457047 Mus musculus Foxe1 gene for forkhead box E1 Length = 2606 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 gccgctgccgctgccgccat 270 |||||||||||||||||||| Sbjct: 1789 gccgctgccgctgccgccat 1808
>emb|AL589699.4| Mouse DNA sequence from clone RP23-92G13 on chromosome 13 Contains the 3' end of the gene for a novel protein similar to KIAA0386, five novel genes, the Gmnn gene for geminin, gene PNAS-27, the Ttrap gene for Traf and Tnf receptor associated protein, the gene for a novel protein similar to KIAA0319, the gene for the ortholog of human and rat aldehyde dehydrogenase 5A1 (succinate-semialdehyde dehydrogenase) (ALDH5A1) (SSADH), the 5' end of the Gpld1 gene for glycosylphosphatidylinositol specific phospholipase D1 and four CpG islands, complete sequence Length = 256608 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 195513 tgccgctgccgctgccgcca 195494
>emb|CR859569.1| Pongo pygmaeus mRNA; cDNA DKFZp459D094 (from clone DKFZp459D094) Length = 3032 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 gccgctgccgctgccgccat 270 |||||||||||||||||||| Sbjct: 208 gccgctgccgctgccgccat 227
>emb|CR860397.1| Pongo pygmaeus mRNA; cDNA DKFZp459J041 (from clone DKFZp459J041) Length = 2974 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 gccgctgccgctgccgccat 270 |||||||||||||||||||| Sbjct: 144 gccgctgccgctgccgccat 163
>gb|AC010114.6| Drosophila melanogaster 3L BAC RP98-10P9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181726 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 ttgttgttgccgctgccgct 262 |||||||||||||||||||| Sbjct: 170749 ttgttgttgccgctgccgct 170768
>gb|AC091218.2| Drosophila melanogaster 3L BAC RP98-3E24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179972 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 ttgttgttgccgctgccgct 262 |||||||||||||||||||| Sbjct: 59506 ttgttgttgccgctgccgct 59525
>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 Length = 1841713 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 823970 tgccgctgccgctgccgcca 823951
>dbj|AK143698.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched library, clone:F430010P06 product:CUG triplet repeat, RNA binding protein 1, full insert sequence Length = 3427 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 23 tgccgctgccgctgccgcca 4
>dbj|AK156725.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830044E18 product:CUG triplet repeat, RNA binding protein 1, full insert sequence Length = 3380 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 35 tgccgctgccgctgccgcca 16
>gb|AC093048.1| Drosophila melanogaster, chromosome 2L, region 36D-36E, BAC clone BACR39D12, complete sequence Length = 184021 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 gttgccgctgccgctgccgc 267 |||||||||||||||||||| Sbjct: 140695 gttgccgctgccgctgccgc 140714
>gb|AC138177.12| Mus musculus chromosome 15, clone RP23-32P19, complete sequence Length = 180896 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 55033 tgccgctgccgctgccgcca 55014
>dbj|AK051381.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130043K22 product:hypothetical PKD domain containing protein, full insert sequence Length = 4828 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 4437 tgccgctgccgctgccgcca 4418
>dbj|AK014492.1| Mus musculus 14 days embryo liver cDNA, RIKEN full-length enriched library, clone:4432412L08 product:CUG triplet repeat, RNA binding protein 1, full insert sequence Length = 3444 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 35 tgccgctgccgctgccgcca 16
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 3776661 tgccgctgccgctgccgcca 3776680
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 tcttccccaccaccaccccc 467 |||||||||||||||||||| Sbjct: 6157502 tcttccccaccaccaccccc 6157521
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 cgctgccgctgccgccattg 272 |||||||||||||||||||| Sbjct: 6067383 cgctgccgctgccgccattg 6067364
>gb|AC105732.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090D11, complete sequence Length = 174865 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 cgctgccgctgccgccattg 272 |||||||||||||||||||| Sbjct: 61646 cgctgccgctgccgccattg 61627
>gb|AF325718.1|AF325718 Pennisetum ciliare glycine rich protein mRNA, complete cds Length = 822 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 gttgccgctgccgctgccgc 267 |||||||||||||||||||| Sbjct: 539 gttgccgctgccgctgccgc 520
>dbj|AB190320.1| Uncultured bacterium bzo135-1, bzo135-2, bzo135-3, bzo135-4, bzo135-5, bzo135-6, bzo135-7 genes for methyltransferase, hypothetical protein, paraquant-inducible protein B, ATPase component of ABC-type transport system, permease component of ABC-type transport system, tyrosine phenol-lyase, hypothetical protein, complete cds, clone:BZO135 Length = 7637 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 ttgccgctgccgctgccgcc 268 |||||||||||||||||||| Sbjct: 3493 ttgccgctgccgctgccgcc 3512
>gb|AC011616.5|AC011616 Drosophila melanogaster, chromosome 3R, region 89D-89E, BAC clone BACR48L13, complete sequence Length = 168666 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 gttgttgccgctgccgctgc 264 |||||||||||||||||||| Sbjct: 19287 gttgttgccgctgccgctgc 19268
>gb|AC011615.4|AC011615 Drosophila melanogaster, chromosome 3R, region 89D-89D, BAC clone BACR01H23, complete sequence Length = 199653 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 gttgttgccgctgccgctgc 264 |||||||||||||||||||| Sbjct: 196191 gttgttgccgctgccgctgc 196172
>gb|AC156024.2| Mus musculus BAC clone RP23-89J1 from chromosome 16, complete sequence Length = 240451 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 tctccccgtgctcttcccca 456 |||||||||||||||||||| Sbjct: 100476 tctccccgtgctcttcccca 100457
>dbj|AP004031.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0432C03 Length = 164394 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 ccccgtcgcccctcgccgtc 196 |||||||||||||||||||| Sbjct: 19218 ccccgtcgcccctcgccgtc 19199
>gb|AC079151.4| Homo sapiens BAC clone RP11-178D14 from 2, complete sequence Length = 32304 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 taataaagttacattttaca 68 |||||||||||||||||||| Sbjct: 2973 taataaagttacattttaca 2992
>gb|AC139881.1| Leishmania major strain Friedlin chromosome 32 clone L1340b, complete sequence Length = 25820 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 ttgttgccgctgccgctgcc 265 |||||||||||||||||||| Sbjct: 20597 ttgttgccgctgccgctgcc 20616
>gb|AY903252.1| Rattus norvegicus strain WKY chromodomain helicase DNA-binding protein 3 long isoform (Chd3) mRNA, partial cds Length = 6088 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 515 tgccgctgccgctgccgcca 496
>gb|AY903251.1| Rattus norvegicus strain SHRSP chromodomain helicase DNA-binding protein 3 long isoform (Chd3) mRNA, partial cds Length = 6082 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 515 tgccgctgccgctgccgcca 496
>gb|AY903250.1| Rattus norvegicus strain SHR/OlaIpcv chromodomain helicase DNA-binding protein 3 long isoform (Chd3) mRNA, partial cds Length = 6088 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 515 tgccgctgccgctgccgcca 496
>gb|AY903249.1| Rattus norvegicus strain WHD chromodomain helicase DNA-binding protein 3 long isoform (Chd3) mRNA, partial cds Length = 6088 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 515 tgccgctgccgctgccgcca 496
>gb|AY903248.1| Rattus norvegicus strain WKY chromodomain helicase DNA-binding protein 3 short isoform (Chd3) mRNA, partial cds Length = 5991 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 520 tgccgctgccgctgccgcca 501
>gb|AY903247.1| Rattus norvegicus strain SHRSP chromodomain helicase DNA-binding protein 3 short isoform (Chd3) mRNA, partial cds Length = 5980 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 510 tgccgctgccgctgccgcca 491
>gb|AY903246.1| Rattus norvegicus strain SHR/OlaIpcv chromodomain helicase DNA-binding protein 3 short isoform (Chd3) mRNA, partial cds Length = 5986 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 515 tgccgctgccgctgccgcca 496
>gb|AY903245.1| Rattus norvegicus strain WHD chromodomain helicase DNA-binding protein 3 short isoform (Chd3) mRNA, partial cds Length = 5986 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 515 tgccgctgccgctgccgcca 496
>ref|XM_220602.3| PREDICTED: Rattus norvegicus chromodomain helicase DNA binding protein 3 (predicted) (Chd3_predicted), mRNA Length = 6599 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 819 tgccgctgccgctgccgcca 800
>dbj|AB161445.1| Clypeaster japonicus T mRNA for transcription factor Brachyury, partial cds Length = 1530 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 1210 tgccgctgccgctgccgcca 1191
>dbj|AK219637.1| Mus musculus cDNA, clone:Y2G0149B22, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000016680, based on BLAT search Length = 106 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 gctcttccccaccaccaccc 465 |||||||||||||||||||| Sbjct: 91 gctcttccccaccaccaccc 72
>dbj|AP003488.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0436F11 Length = 165550 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 tcttccccaccaccaccccc 467 |||||||||||||||||||| Sbjct: 71321 tcttccccaccaccaccccc 71340
>dbj|AP004014.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1606_D04 Length = 92729 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 gccgctgccgctgccgccat 270 |||||||||||||||||||| Sbjct: 53743 gccgctgccgctgccgccat 53724
>dbj|AP004267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0039H02 Length = 169162 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 gttgccgctgccgctgccgc 267 |||||||||||||||||||| Sbjct: 58750 gttgccgctgccgctgccgc 58769
>ref|XM_557696.1| Anopheles gambiae str. PEST ENSANGP00000028405 (ENSANGG00000024737), partial mRNA Length = 654 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 251 gccgctgccgctgccgccattgac 274 ||||||||||| |||||||||||| Sbjct: 579 gccgctgccgccgccgccattgac 556
>ref|XM_554960.1| Anopheles gambiae str. PEST ENSANGP00000025547 (ENSANGG00000023197), partial mRNA Length = 1824 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 1782 tgccgctgccgctgccgcca 1763
>dbj|AK026471.1| Homo sapiens cDNA: FLJ22818 fis, clone KAIA3839, highly similar to HSU59919 Human Smg GDS-associated protein SMAP mRNA Length = 2788 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 gccgctgccgctgccgccat 270 |||||||||||||||||||| Sbjct: 33 gccgctgccgctgccgccat 52
>ref|XM_318716.2| Anopheles gambiae str. PEST ENSANGP00000010270 (ENSANGG00000007781), partial mRNA Length = 1008 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 acctgacgtcggcagcggcc 220 |||||||||||||||||||| Sbjct: 536 acctgacgtcggcagcggcc 555
>ref|XM_316961.2| Anopheles gambiae str. PEST ENSANGP00000006590 (ENSANGG00000004992), partial mRNA Length = 10824 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 7155 tgccgctgccgctgccgcca 7174
>dbj|AK110446.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-D12, full insert sequence Length = 3018 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 ttgccgctgccgctgccgcc 268 |||||||||||||||||||| Sbjct: 427 ttgccgctgccgctgccgcc 408
>dbj|AK109827.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-B06, full insert sequence Length = 1907 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 cgctgccgctgccgccattg 272 |||||||||||||||||||| Sbjct: 453 cgctgccgctgccgccattg 472
>emb|CR753897.9| Zebrafish DNA sequence from clone CH211-219A15 in linkage group 18, complete sequence Length = 124389 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 tacattttacaagcagccta 77 |||||||||||||||||||| Sbjct: 53760 tacattttacaagcagccta 53741
>gb|AY110226.1| Zea mays CL6960_-1 mRNA sequence Length = 582 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 92 tgccgctgccgctgccgcca 111
>gb|AY110004.1| Zea mays CL16185_1 mRNA sequence Length = 1230 Score = 40.1 bits (20), Expect = 6.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 427 ccgcacancgtctccccgtgctc 449 ||||||| ||||||||||||||| Sbjct: 327 ccgcacagcgtctccccgtgctc 349
>gb|AE003722.4| Drosophila melanogaster chromosome 3R, section 60 of 118 of the complete sequence Length = 221164 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 gttgttgccgctgccgctgc 264 |||||||||||||||||||| Sbjct: 80428 gttgttgccgctgccgctgc 80409
>gb|AE003713.3| Drosophila melanogaster chromosome 3R, section 51 of 118 of the complete sequence Length = 226561 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 gttgttgccgctgccgctgc 264 |||||||||||||||||||| Sbjct: 194359 gttgttgccgctgccgctgc 194340
>gb|AE003658.3| Drosophila melanogaster chromosome 2L, section 67 of 83 of the complete sequence Length = 262745 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 gttgccgctgccgctgccgc 267 |||||||||||||||||||| Sbjct: 48613 gttgccgctgccgctgccgc 48632
>gb|AE003553.3| Drosophila melanogaster chromosome 3L, section 32 of 83 of the complete sequence Length = 288102 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 ttgttgttgccgctgccgct 262 |||||||||||||||||||| Sbjct: 144347 ttgttgttgccgctgccgct 144366
>gb|AC006471.1|AC006471 Drosophila melanogaster, chromosome 2L, region 36D2-36E2, P1 clones DS00554 and DS04489, complete sequence Length = 134019 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 gttgccgctgccgctgccgc 267 |||||||||||||||||||| Sbjct: 61855 gttgccgctgccgctgccgc 61836
>dbj|AK122246.1| Mus musculus mRNA for mKIAA0319 protein Length = 4971 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 4573 tgccgctgccgctgccgcca 4554
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 1324957 tgccgctgccgctgccgcca 1324938
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 ttgccgctgccgctgccgcc 268 |||||||||||||||||||| Sbjct: 466512 ttgccgctgccgctgccgcc 466531
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 252 ccgctgccgctgccgccattgacg 275 |||||||||| ||||||||||||| Sbjct: 1357688 ccgctgccgccgccgccattgacg 1357711
>gb|U59919.1|HSU59919 Human Smg GDS-associated protein SMAP mRNA, complete cds Length = 2648 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 gccgctgccgctgccgccat 270 |||||||||||||||||||| Sbjct: 171 gccgctgccgctgccgccat 190
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 3776635 tgccgctgccgctgccgcca 3776654
>emb|AL732638.6|CNS08C9D Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0010K22 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 92728 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 63384 tgccgctgccgctgccgcca 63365
>gb|AF056325.1|AF056325 Hordeum vulgare myo-inositol 1-phosphate synthase mRNA, complete cds Length = 2152 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 tcccccgtcgcccctcgccg 194 |||||||||||||||||||| Sbjct: 1740 tcccccgtcgcccctcgccg 1721
>gb|AC122183.4| Mus musculus BAC clone RP23-14P23 from 3, complete sequence Length = 210223 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 139343 tgccgctgccgctgccgcca 139362
>emb|AL591067.35| Mouse DNA sequence from clone RP23-333D2 on chromosome 11, complete sequence Length = 196512 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 cttccccaccaccacccccc 468 |||||||||||||||||||| Sbjct: 68185 cttccccaccaccacccccc 68204
>emb|AL808012.13| Mouse DNA sequence from clone RP23-451N14 on chromosome X, complete sequence Length = 116926 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 243 ttgttgttgccgctgccgctgccgccat 270 |||||||||| ||||| ||||||||||| Sbjct: 98507 ttgttgttgctgctgctgctgccgccat 98480
>emb|AL672241.6| Mouse DNA sequence from clone RP23-147D3 on chromosome 2, complete sequence Length = 197925 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 tgccgctgccgctgccgcca 269 |||||||||||||||||||| Sbjct: 88571 tgccgctgccgctgccgcca 88552
>emb|AL806523.14| Mouse DNA sequence from clone RP23-423O7 on chromosome 4, complete sequence Length = 217762 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 gccgctgccgctgccgccat 270 |||||||||||||||||||| Sbjct: 171660 gccgctgccgctgccgccat 171679 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,217,644 Number of Sequences: 3902068 Number of extensions: 3217644 Number of successful extensions: 99700 Number of sequences better than 10.0: 179 Number of HSP's better than 10.0 without gapping: 182 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 98237 Number of HSP's gapped (non-prelim): 1452 length of query: 475 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 453 effective length of database: 17,147,199,772 effective search space: 7767681496716 effective search space used: 7767681496716 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
