ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal8d08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ACDA_METTH (O27743) Acetyl-CoA decarbonylase/synthase complex al... 29 5.4
2STXB5_MOUSE (Q8K400) Syntaxin-binding protein 5 (Tomosyn-1) (Let... 28 9.2

>ACDA_METTH (O27743) Acetyl-CoA decarbonylase/synthase complex alpha subunit|
           (EC 1.2.99.2) (ACDS complex alpha subunit) (ACDS complex
           carbon monoxide dehydrogenase) (ACDS CODH)
          Length = 780

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = -1

Query: 428 AAVEAAHDARMKCVAVASKHPAYELSAADLVVKRLDELSVVDLKNLADIDSP 273
           AA + A    + C+   + H  +     D +++RL E   +DL +  DI++P
Sbjct: 97  AATQQARTVLLACLIGTAAHAGHARHLVDHLIERLGEDYKIDLGSNVDIEAP 148



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>STXB5_MOUSE (Q8K400) Syntaxin-binding protein 5 (Tomosyn-1) (Lethal(2) giant|
           larvae protein homolog 3)
          Length = 1152

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -1

Query: 407 DARMKCVAVASKHPA-YELSAADLVVKRLDELSVVDLKNLADIDSPE 270
           ++RM C+A  S H   Y  S  +++ + +  L V  L  + D+D+PE
Sbjct: 513 ESRMLCIAGVSAHVIIYRFSKQEVLTEVIPMLEVRLLYEINDVDTPE 559


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,771,723
Number of Sequences: 219361
Number of extensions: 780411
Number of successful extensions: 1703
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1703
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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