ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal32i19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1FA24B_HUMAN (Q8N5W8) Protein FAM24B precursor 28 6.1
2KIF4A_CHICK (Q90640) Chromosome-associated kinesin KIF4A (Chromo... 28 7.9

>FA24B_HUMAN (Q8N5W8) Protein FAM24B precursor|
          Length = 94

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = +1

Query: 100 NTTPALLCSAVCPAADPSRAHCTCLFFSSRPPCFCAWN 213
           N+    + +  CPA      +  C  F S PPC C  N
Sbjct: 54  NSQAKTIATESCPALQCCEGYRMCASFDSLPPCCCDIN 91



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>KIF4A_CHICK (Q90640) Chromosome-associated kinesin KIF4A (Chromokinesin)|
          Length = 1225

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = -3

Query: 275 ARGGGVPLEFHAPHPLQNLSKFHAQKQGGREEKNKHVQCALLGSAAGHTAE 123
           A GG +P+  ++  P +NL     + Q   EE  K  +   L  AAG TA+
Sbjct: 370 AHGGTLPVSINSMAPSENLQSLMEKNQSLMEENEKLSRG--LSEAAGQTAQ 418


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,748,751
Number of Sequences: 219361
Number of extensions: 716342
Number of successful extensions: 1641
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1641
length of database: 80,573,946
effective HSP length: 67
effective length of database: 65,876,759
effective search space used: 1581042216
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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