>emb|AJ234439.1|HVU234439 Hordeum vulgare partial mRNA; clone cMWG0725
          Length = 383

 Score =  456 bits (230), Expect = e-125
 Identities = 237/238 (99%), Gaps = 1/238 (0%)
 Strand = Plus / Minus

                                                                       
Query: 9   atttcctttaattaaagcttcagttgacgaaattatactcctttagcatagatgggtgtg 68
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 atttcctttaattaaagcttcagttgacgaaattatactcctttagcatagatgggtgtg 179

                                                                       
Query: 69  tgaaaattaactttacatacagagagagtataatactacgcctgctctgctgtgctctgc 128
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 tgaaaattaactttacatacagagagagtataatactacgcctgctctgctgtgctctgc 119

                                                                       
Query: 129 cgtgtgcccagcagcagacccaagcagggcacactgtacgtgtttgttcttctcctcgcg 188
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 cgtgtgcccagcagcagacccaagcagggcacactgtacgtgtttgttcttctcctcgcg 59

                                                                     
Query: 189 a-cccccttgcttttgtgcgtggaatttgctcagattctggaggggatgaggggcgtg 245
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58  accccccttgcttttgtgcgtggaatttgctcagattctggaggggatgaggggcgtg 1

>ref|XM_483211.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1507

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                
Query: 218  tcagattctggaggggatgaggggcgtggaattcgagaggtacgccgccgcc 269
            |||||| ||||| |||||||| ||||| |||||||| |||||||||||||||
Sbjct: 1293 tcagatcctggacgggatgagcggcgtcgaattcgacaggtacgccgccgcc 1242

>ref|XM_507283.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1345_D02.38 mRNA
          Length = 1567

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                
Query: 218  tcagattctggaggggatgaggggcgtggaattcgagaggtacgccgccgcc 269
            |||||| ||||| |||||||| ||||| |||||||| |||||||||||||||
Sbjct: 1285 tcagatcctggacgggatgagcggcgtcgaattcgacaggtacgccgccgcc 1234

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                    
Query: 218      tcagattctggaggggatgaggggcgtggaattcgagaggtacgccgccgcc 269
                |||||| ||||| |||||||| ||||| |||||||| |||||||||||||||
Sbjct: 24821183 tcagatcctggacgggatgagcggcgtcgaattcgacaggtacgccgccgcc 24821234

>dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1345_D02
          Length = 159613

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                  
Query: 218    tcagattctggaggggatgaggggcgtggaattcgagaggtacgccgccgcc 269
              |||||| ||||| |||||||| ||||| |||||||| |||||||||||||||
Sbjct: 121984 tcagatcctggacgggatgagcggcgtcgaattcgacaggtacgccgccgcc 122035

>dbj|AP004190.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1506_F01
          Length = 121202

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                 
Query: 218   tcagattctggaggggatgaggggcgtggaattcgagaggtacgccgccgcc 269
             |||||| ||||| |||||||| ||||| |||||||| |||||||||||||||
Sbjct: 25629 tcagatcctggacgggatgagcggcgtcgaattcgacaggtacgccgccgcc 25680

>dbj|AK099206.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049F20, full
            insert sequence
          Length = 1321

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                
Query: 218  tcagattctggaggggatgaggggcgtggaattcgagaggtacgccgccgcc 269
            |||||| ||||| |||||||| ||||| |||||||| |||||||||||||||
Sbjct: 1059 tcagatcctggacgggatgagcggcgtcgaattcgacaggtacgccgccgcc 1008

>dbj|AK065126.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001P06, full
            insert sequence
          Length = 1507

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                
Query: 218  tcagattctggaggggatgaggggcgtggaattcgagaggtacgccgccgcc 269
            |||||| ||||| |||||||| ||||| |||||||| |||||||||||||||
Sbjct: 1293 tcagatcctggacgggatgagcggcgtcgaattcgacaggtacgccgccgcc 1242

>dbj|AK064774.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000A23, full
            insert sequence
          Length = 1567

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                
Query: 218  tcagattctggaggggatgaggggcgtggaattcgagaggtacgccgccgcc 269
            |||||| ||||| |||||||| ||||| |||||||| |||||||||||||||
Sbjct: 1285 tcagatcctggacgggatgagcggcgtcgaattcgacaggtacgccgccgcc 1234

>gb|AY107617.1| Zea mays PCO084394 mRNA sequence
          Length = 1016

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                               
Query: 217 ctcagattctggaggggatgaggggcgtggaattcgagaggtacgccgccgc 268
           ||||||| || || |||||||| |||||||| || || ||||||||||||||
Sbjct: 766 ctcagatcctagatgggatgagcggcgtggagtttgacaggtacgccgccgc 715



 Score = 42.1 bits (21), Expect = 0.91
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 66  gtgtgaaaattaactttacatacagagagagta 98
           |||||||| |||||||||||| | |||||||||
Sbjct: 879 gtgtgaaatttaactttacattctgagagagta 847

>emb|AL158086.32| Human DNA sequence from clone RP4-815O16 on chromosome 1p35.1-36.13
             Contains the C1QA gene for complement component 1( q
             subcomponent, alpha polypeptide), the C1QG gene for
             complement component 1 (q subcomponent, gamma
             polypeptide), the C1QB gene for complement component 1 (q
             subcomponent, beta polypeptide), the 5' end of the  EPHB2
             gene for EphB2 and a CpG island, complete sequence
          Length = 87320

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 108   gcctgctctgctgtgctctgc 128
             |||||||||||||||||||||
Sbjct: 53126 gcctgctctgctgtgctctgc 53106

>dbj|AP001547.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-802F5, complete
              sequence
          Length = 144493

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 108    gcctgctctgctgtgctctgc 128
              |||||||||||||||||||||
Sbjct: 115464 gcctgctctgctgtgctctgc 115484

>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome
          Length = 1664970

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 9      atttcctttaattaaagcttc 29
              |||||||||||||||||||||
Sbjct: 865083 atttcctttaattaaagcttc 865063

>gb|AC107685.7| Mus musculus chromosome 19, clone RP24-376I6, complete sequence
          Length = 175566

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 108  gcctgctctgctgtgctctg 127
            ||||||||||||||||||||
Sbjct: 7163 gcctgctctgctgtgctctg 7144

>gb|AC148021.2| Mus musculus BAC clone RP23-9A7 from chromosome 19, complete sequence
          Length = 213178

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 108  gcctgctctgctgtgctctg 127
            ||||||||||||||||||||
Sbjct: 6242 gcctgctctgctgtgctctg 6261

>gb|AC104200.12| Mus musculus chromosome 13, clone RP24-512M2, complete sequence
          Length = 171912

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 152    gcagggcacactgtacgtgtttgttctt 179
              ||||| ||||||||| ||||||||||||
Sbjct: 106185 gcaggacacactgtaggtgtttgttctt 106158

>gb|DQ177463.1| Spirodela polyrrhiza serine-glyoxylate aminotransferase mRNA,
            complete cds
          Length = 1378

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 218  tcagattctggaggggatgagggg 241
            |||||| |||||||||||||||||
Sbjct: 1241 tcagatcctggaggggatgagggg 1218

>gb|AC140378.2| Mus musculus BAC clone RP24-84M18 from chromosome 19, complete sequence
          Length = 194681

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 108   gcctgctctgctgtgctctg 127
             ||||||||||||||||||||
Sbjct: 74034 gcctgctctgctgtgctctg 74015

>gb|AC124517.4| Mus musculus BAC clone RP23-387K15 from chromosome 13, complete
             sequence
          Length = 198825

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   cctgctctgctgtgctctgc 128
             ||||||||||||||||||||
Sbjct: 75886 cctgctctgctgtgctctgc 75905

>gb|AC124563.4| Mus musculus BAC clone RP23-206B15 from chromosome 6, complete sequence
          Length = 210092

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 224    tctggaggggatgaggggcgtgga 247
              ||||||||||||| ||||||||||
Sbjct: 114645 tctggaggggatggggggcgtgga 114622

>ref|XM_802541.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053509985.69) partial mRNA
          Length = 315

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 258 tacgccgccgcctcgtgccg 277
           ||||||||||||||||||||
Sbjct: 312 tacgccgccgcctcgtgccg 293

>ref|XM_807735.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053507941.14) partial mRNA
          Length = 315

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 258 tacgccgccgcctcgtgccg 277
           ||||||||||||||||||||
Sbjct: 312 tacgccgccgcctcgtgccg 293

>gb|AC160107.2| Mus musculus BAC clone RP24-252N17 from chromosome 13, complete
            sequence
          Length = 178725

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 109  cctgctctgctgtgctctgc 128
            ||||||||||||||||||||
Sbjct: 6551 cctgctctgctgtgctctgc 6532

>gb|AC162933.2| Mus musculus BAC clone RP23-148J22 from chromosome 12, complete sequence
          Length = 236972

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     aaagcttcagttgacgaaat 41
              ||||||||||||||||||||
Sbjct: 142993 aaagcttcagttgacgaaat 142974



 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     aaagcttcagttgacgaaat 41
              ||||||||||||||||||||
Sbjct: 141428 aaagcttcagttgacgaaat 141409

>emb|BX928753.10| Zebrafish DNA sequence from clone DKEY-5J3 in linkage group 17, complete
              sequence
          Length = 159225

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 67     tgtgaaaattaactttacat 86
              ||||||||||||||||||||
Sbjct: 101036 tgtgaaaattaactttacat 101055

>emb|BX571872.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment
              14/17
          Length = 348498

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     aaaattaactttacatacag 90
              ||||||||||||||||||||
Sbjct: 280903 aaaattaactttacatacag 280922

>emb|AL355532.10| Human DNA sequence from clone RP11-487F5 on chromosome 6 Contains the
             3' part of the GRIK2 (glutamate receptor, ionotropic,
             kainate 2) gene, ESTs, STSs and GSSs, complete sequence
          Length = 181302

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 133   tgcccagcagcagacccaagcagg 156
             ||||||| ||||||||||||||||
Sbjct: 29784 tgcccagaagcagacccaagcagg 29807

>emb|BX927328.10| Zebrafish DNA sequence from clone CH211-10M4 in linkage group 17,
             complete sequence
          Length = 197949

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 67    tgtgaaaattaactttacat 86
             ||||||||||||||||||||
Sbjct: 30137 tgtgaaaattaactttacat 30156

>gb|AY053359.1| Spirodela polyrhiza serine-glyoxylate aminotransferase (SGAT) mRNA,
           partial cds
          Length = 320

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 218 tcagattctggaggggatgagggg 241
           |||||| |||||||||||||||||
Sbjct: 183 tcagatcctggaggggatgagggg 160

>ref|XM_623549.1| PREDICTED: Apis mellifera similar to glucosephosphate isomerase
            (LOC551154), mRNA
          Length = 1754

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 10   tttcctttaattaaagcttcagtt 33
            |||||||| |||||||||||||||
Sbjct: 1408 tttcctttcattaaagcttcagtt 1385

>gb|AC067738.17| Homo sapiens 3 BAC RP11-381H1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 82883

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 144   agacccaagcagggcacactgtac 167
             |||||||||||| |||||||||||
Sbjct: 20379 agacccaagcagtgcacactgtac 20356

>emb|CT025545.28| Mouse DNA sequence from clone RP24-88C18 on chromosome 12, complete
             sequence
          Length = 266295

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    aaagcttcagttgacgaaat 41
             ||||||||||||||||||||
Sbjct: 67215 aaagcttcagttgacgaaat 67234



 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    aaagcttcagttgacgaaat 41
             ||||||||||||||||||||
Sbjct: 65650 aaagcttcagttgacgaaat 65669

>dbj|AP006198.1| Homo sapiens genomic DNA, chromosome 6, clone:RP11-410D4, complete
             sequence
          Length = 139671

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 133   tgcccagcagcagacccaagcagg 156
             ||||||| ||||||||||||||||
Sbjct: 66739 tgcccagaagcagacccaagcagg 66762

>dbj|AP002530.2| Homo sapiens genomic DNA, chromosome 6q21, anti-oncogene region, section
              3/4
          Length = 300000

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 133    tgcccagcagcagacccaagcagg 156
              ||||||| ||||||||||||||||
Sbjct: 152035 tgcccagaagcagacccaagcagg 152058

>dbj|AB042030.1| Homo sapiens genomic DNA, chromosome 6q21, BAC clone:610J6, complete
             sequence
          Length = 111927

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 133   tgcccagcagcagacccaagcagg 156
             ||||||| ||||||||||||||||
Sbjct: 87059 tgcccagaagcagacccaagcagg 87082


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,590,202
Number of Sequences: 3902068
Number of extensions: 2590202
Number of successful extensions: 65870
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65768
Number of HSP's gapped (non-prelim): 101
length of query: 277
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 255
effective length of database: 17,147,199,772
effective search space: 4372535941860
effective search space used: 4372535941860
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)