| Clone Name | rbaal32i08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_463045.1| Oryza sativa (japonica cultivar-group), mRNA Length = 745 Score = 91.7 bits (46), Expect = 2e-15 Identities = 109/130 (83%) Strand = Plus / Minus Query: 279 caccatatataataccaccccacatggctaagctggctagcacaaagtgctcttccttcc 338 ||||||| | |||||| |||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 232 caccataaaaaatacctccccacatagctaagctggctagcacaaattgctcttccttcc 173 Query: 339 agttgccggggttcaggggctcctgccacatgttgactttggtcgatccgtggtgatctg 398 |||| | ||||||| || || ||||| |||||||| || | | || |||||||||| Sbjct: 172 agttagccgggttcatcggttcttgccaaatgttgaccttcggaggcccatggtgatctg 113 Query: 399 cggcgccggc 408 | |||||||| Sbjct: 112 cagcgccggc 103
>dbj|AK059201.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-A09, full insert sequence Length = 525 Score = 91.7 bits (46), Expect = 2e-15 Identities = 109/130 (83%) Strand = Plus / Minus Query: 279 caccatatataataccaccccacatggctaagctggctagcacaaagtgctcttccttcc 338 ||||||| | |||||| |||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 258 caccataaaaaatacctccccacatagctaagctggctagcacaaattgctcttccttcc 199 Query: 339 agttgccggggttcaggggctcctgccacatgttgactttggtcgatccgtggtgatctg 398 |||| | ||||||| || || ||||| |||||||| || | | || |||||||||| Sbjct: 198 agttagccgggttcatcggttcttgccaaatgttgaccttcggaggcccatggtgatctg 139 Query: 399 cggcgccggc 408 | |||||||| Sbjct: 138 cagcgccggc 129
>dbj|AK121839.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033100N18, full insert sequence Length = 645 Score = 87.7 bits (44), Expect = 3e-14 Identities = 59/64 (92%) Strand = Plus / Minus Query: 279 caccatatataataccaccccacatggctaagctggctagcacaaagtgctcttccttcc 338 ||||||| | |||||| |||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 228 caccataaaaaatacctccccacatagctaagctggctagcacaaattgctcttccttcc 169 Query: 339 agtt 342 |||| Sbjct: 168 agtt 165
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 279 caccatatataataccaccccacatggctaagctggctagcacaaa 324 ||||||| | |||||| |||||||| |||||||||||||||||||| Sbjct: 21188301 caccataaaaaatacctccccacatagctaagctggctagcacaaa 21188256
>gb|AC133333.5| Oryza sativa chromosome 3 BAC OJ1785_A05 genomic sequence, complete sequence Length = 174910 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 279 caccatatataataccaccccacatggctaagctggctagcacaaa 324 ||||||| | |||||| |||||||| |||||||||||||||||||| Sbjct: 44216 caccataaaaaatacctccccacatagctaagctggctagcacaaa 44171
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 279 caccatatataataccaccccacatggctaagctggctagcacaaa 324 ||||||| | |||||| |||||||| |||||||||||||||||||| Sbjct: 21181330 caccataaaaaatacctccccacatagctaagctggctagcacaaa 21181285
>gb|AY103706.1| Zea mays PCO107541 mRNA sequence Length = 706 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 314 gctagcacaaagtgctcttccttccagttgc 344 ||||| |||||||||||||||||||| |||| Sbjct: 234 gctagaacaaagtgctcttccttccacttgc 204
>ref|NM_146261.1| Mus musculus cDNA sequence BC031748 (BC031748), mRNA Length = 3263 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 208 tgctgctgctggcactgacgctggccccgc 237 ||||||||||||||||| ||||||| |||| Sbjct: 1100 tgctgctgctggcactggcgctggcaccgc 1071
>gb|BC031748.1| Mus musculus cDNA sequence BC031748, mRNA (cDNA clone MGC:19245 IMAGE:3672969), complete cds Length = 3263 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 208 tgctgctgctggcactgacgctggccccgc 237 ||||||||||||||||| ||||||| |||| Sbjct: 1100 tgctgctgctggcactggcgctggcaccgc 1071
>ref|XM_855641.1| PREDICTED: Canis familiaris similar to solute carrier family 22 member 5, transcript variant 2 (LOC608146), mRNA Length = 1698 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 208 tgctgctgctggcactgacgct 229 |||||||||||||||||||||| Sbjct: 797 tgctgctgctggcactgacgct 818
>ref|XM_845028.1| PREDICTED: Canis familiaris similar to solute carrier family 22 member 5, transcript variant 1 (LOC608146), mRNA Length = 1707 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 208 tgctgctgctggcactgacgct 229 |||||||||||||||||||||| Sbjct: 797 tgctgctgctggcactgacgct 818
>gb|AC124370.3| Mus musculus BAC clone RP24-554F1 from chromosome 3, complete sequence Length = 181208 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 208 tgctgctgctggcactgacgct 229 |||||||||||||||||||||| Sbjct: 36206 tgctgctgctggcactgacgct 36227
>gb|AC121579.3| Mus musculus BAC clone RP23-255H8 from 3, complete sequence Length = 184377 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 208 tgctgctgctggcactgacgct 229 |||||||||||||||||||||| Sbjct: 163213 tgctgctgctggcactgacgct 163234
>dbj|AK154624.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630101J17 product:hypothetical Serine-rich region profile containing protein, full insert sequence Length = 4092 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 208 tgctgctgctggcactgacgctggccccgc 237 ||||||||||||||||| ||||||| |||| Sbjct: 1138 tgctgctgctggcactggcgctggcaccgc 1109
>dbj|AK039695.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330089G10 product:hypothetical protein, full insert sequence Length = 3208 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 208 tgctgctgctggcactgacgctggccccgc 237 ||||||||||||||||| ||||||| |||| Sbjct: 1063 tgctgctgctggcactggcgctggcaccgc 1034
>emb|AL954296.9| Mouse DNA sequence from clone RP23-272P2 on chromosome X, complete sequence Length = 88296 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 208 tgctgctgctggcactgacgctggccccgc 237 ||||||||||||||||| ||||||| |||| Sbjct: 80100 tgctgctgctggcactggcgctggcaccgc 80071
>gb|AC127303.3| Mus musculus BAC clone RP23-280E20 from chromosome X, complete sequence Length = 212318 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 14 atattctcaacttcctgtaat 34 ||||||||||||||||||||| Sbjct: 192505 atattctcaacttcctgtaat 192525
>gb|AC073848.4|AC073848 Homo sapiens BAC clone RP11-669M16 from 4, complete sequence Length = 163636 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 76 ttcatgatggctgggcagtgcagctcctt 104 |||||||||||||||| ||||||||||| Sbjct: 82915 ttcatgatggctgggctttgcagctcctt 82943
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 25 ttcctgtaatagaagatttgttggatgaa 53 ||||||| || |||||||||||||||||| Sbjct: 19958797 ttcctgttattgaagatttgttggatgaa 19958769
>dbj|AP004753.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0508B05 Length = 166165 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 25 ttcctgtaatagaagatttgttggatgaa 53 ||||||| || |||||||||||||||||| Sbjct: 136398 ttcctgttattgaagatttgttggatgaa 136370
>dbj|AP005609.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0014M17 Length = 156778 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 25 ttcctgtaatagaagatttgttggatgaa 53 ||||||| || |||||||||||||||||| Sbjct: 62918 ttcctgttattgaagatttgttggatgaa 62890
>emb|BX072557.8| Mouse DNA sequence from clone RP23-79L4 on chromosome X, complete sequence Length = 198694 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 14 atattctcaacttcctgtaat 34 ||||||||||||||||||||| Sbjct: 104828 atattctcaacttcctgtaat 104848
>gb|AE015925.1| Chlamydophila caviae GPIC, complete genome Length = 1173390 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 138 tatcgtcaacaacatgcttaa 158 ||||||||||||||||||||| Sbjct: 217324 tatcgtcaacaacatgcttaa 217304
>ref|NM_179674.1| Arabidopsis thaliana unknown protein AT2G20820 transcript variant AT2G20820.1 mRNA, complete cds Length = 596 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 377 ttggtcgatccgtggtgatctgcggcgccggc 408 ||||| ||||| |||||||| ||||||||||| Sbjct: 178 ttggtagatccatggtgatcagcggcgccggc 147
>ref|NM_179675.1| Arabidopsis thaliana unknown protein AT2G20820 transcript variant AT2G20820.2 mRNA, complete cds Length = 597 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 377 ttggtcgatccgtggtgatctgcggcgccggc 408 ||||| ||||| |||||||| ||||||||||| Sbjct: 229 ttggtagatccatggtgatcagcggcgccggc 198
>ref|NM_203236.1| Arabidopsis thaliana nucleic acid binding AT5G59950 transcript variant AT5G59950.3 mRNA, complete cds Length = 1123 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 taaataacacatattctcaa 23 |||||||||||||||||||| Sbjct: 925 taaataacacatattctcaa 906
>ref|NM_125388.3| Arabidopsis thaliana nucleic acid binding AT5G59950 transcript variant AT5G59950.2 mRNA, complete cds Length = 1338 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 taaataacacatattctcaa 23 |||||||||||||||||||| Sbjct: 1140 taaataacacatattctcaa 1121
>ref|NM_180898.2| Arabidopsis thaliana nucleic acid binding AT5G59950 transcript variant AT5G59950.1 mRNA, complete cds Length = 1227 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 taaataacacatattctcaa 23 |||||||||||||||||||| Sbjct: 1029 taaataacacatattctcaa 1010
>ref|XM_419477.1| PREDICTED: Gallus gallus similar to potassium channel, subfamily K, member 16; pancreatic 2P domain potassium channel TALK-1 (LOC421423), mRNA Length = 1974 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 gtgccggtgctgctgctggc 220 |||||||||||||||||||| Sbjct: 1054 gtgccggtgctgctgctggc 1073
>gb|AC109831.5| Mus musculus BAC clone RP24-104B17 from chromosome 9, complete sequence Length = 138096 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 aggaaataaagctcggatgc 192 |||||||||||||||||||| Sbjct: 39877 aggaaataaagctcggatgc 39896
>gb|AC137995.31| Medicago truncatula clone mth2-11j1, complete sequence Length = 146749 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 taataaataacacatattctcaac 24 ||||| |||||||||||||||||| Sbjct: 13334 taatagataacacatattctcaac 13311
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 ccgccgcaagcagacgagac 487 |||||||||||||||||||| Sbjct: 3738664 ccgccgcaagcagacgagac 3738683
>gb|AF339715.1| Arabidopsis thaliana unknown protein (At2g20820) mRNA, complete cds Length = 332 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 377 ttggtcgatccgtggtgatctgcggcgccggc 408 ||||| ||||| |||||||| ||||||||||| Sbjct: 128 ttggtagatccatggtgatcagcggcgccggc 97
>gb|AF326896.1| Arabidopsis thaliana unknown protein (At2g20820) mRNA, complete cds Length = 612 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 377 ttggtcgatccgtggtgatctgcggcgccggc 408 ||||| ||||| |||||||| ||||||||||| Sbjct: 178 ttggtagatccatggtgatcagcggcgccggc 147
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14 Length = 344805 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 gtgccggtgctgctgctggc 220 |||||||||||||||||||| Sbjct: 171914 gtgccggtgctgctgctggc 171933
>gb|AY136433.1| Arabidopsis thaliana transcriptional coactivator-like protein (At5g59950) mRNA, complete cds Length = 1179 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 taaataacacatattctcaa 23 |||||||||||||||||||| Sbjct: 982 taaataacacatattctcaa 963
>emb|CR931731.1| Medicago truncatula chromosome 5 clone mth2-83l19, COMPLETE SEQUENCE Length = 120299 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 taataaataacacatattctcaac 24 ||||| |||||||||||||||||| Sbjct: 115508 taatagataacacatattctcaac 115485
>gb|AC161424.3| Mus musculus BAC clone RP23-252J6 from chromosome 9, complete sequence Length = 244497 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 aggaaataaagctcggatgc 192 |||||||||||||||||||| Sbjct: 225078 aggaaataaagctcggatgc 225097
>gb|AC020634.16| Homo sapiens 3 BAC RP11-9N20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 181174 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 85 gctgggcagtgcagctccttaaccttgc 112 |||||||||||||| |||| |||||||| Sbjct: 79981 gctgggcagtgcaggtcctgaaccttgc 80008
>gb|AC021183.6| Homo sapiens BAC clone RP11-737D22 from 4, complete sequence Length = 118837 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ctccttaaccttgccagcct 118 |||||||||||||||||||| Sbjct: 60489 ctccttaaccttgccagcct 60470
>gb|AY054125.1| Arabidopsis thaliana At2g20820/F5H14.21 mRNA, complete cds Length = 282 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 377 ttggtcgatccgtggtgatctgcggcgccggc 408 ||||| ||||| |||||||| ||||||||||| Sbjct: 128 ttggtagatccatggtgatcagcggcgccggc 97
>gb|AF324672.2|AF324672 Arabidopsis thaliana At2g20820 (At2g20820/F5H14.21) mRNA, complete cds Length = 596 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 377 ttggtcgatccgtggtgatctgcggcgccggc 408 ||||| ||||| |||||||| ||||||||||| Sbjct: 178 ttggtagatccatggtgatcagcggcgccggc 147
>gb|AF380628.1|AF380628 Arabidopsis thaliana At2g20820/F5H14.21 mRNA, complete cds Length = 596 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 377 ttggtcgatccgtggtgatctgcggcgccggc 408 ||||| ||||| |||||||| ||||||||||| Sbjct: 178 ttggtagatccatggtgatcagcggcgccggc 147
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 gctcttccttccagttgccg 346 |||||||||||||||||||| Sbjct: 18335527 gctcttccttccagttgccg 18335508
>emb|BX819526.1|CNS0A8V3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB87ZA12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 610 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 377 ttggtcgatccgtggtgatctgcggcgccggc 408 ||||| ||||| |||||||| ||||||||||| Sbjct: 193 ttggtagatccatggtgatcagcggcgccggc 162
>emb|BX819202.1|CNS0A8VI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB56ZF10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 510 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 377 ttggtcgatccgtggtgatctgcggcgccggc 408 ||||| ||||| |||||||| ||||||||||| Sbjct: 101 ttggtagatccatggtgatcagcggcgccggc 70
>emb|BX829952.1|CNS0A07Z Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB49ZE02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1058 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 taaataacacatattctcaa 23 |||||||||||||||||||| Sbjct: 1029 taaataacacatattctcaa 1010
>emb|BX831891.1|CNS09ZOX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH37ZD01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 961 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 taaataacacatattctcaa 23 |||||||||||||||||||| Sbjct: 945 taaataacacatattctcaa 926
>emb|BX831701.1|CNS09ZTV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH24ZG11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1170 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 taaataacacatattctcaa 23 |||||||||||||||||||| Sbjct: 1140 taaataacacatattctcaa 1121
>emb|BX834051.1|CNS09Z7I Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL92ZD02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 547 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 taaataacacatattctcaa 23 |||||||||||||||||||| Sbjct: 509 taaataacacatattctcaa 490
>gb|AC093892.3| Homo sapiens BAC clone RP11-702L18 from 2, complete sequence Length = 111078 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 acaaagtgctcttccttcca 339 |||||||||||||||||||| Sbjct: 91012 acaaagtgctcttccttcca 90993
>gb|AY088684.1| Arabidopsis thaliana clone 91872 mRNA, complete sequence Length = 576 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 377 ttggtcgatccgtggtgatctgcggcgccggc 408 ||||| ||||| |||||||| ||||||||||| Sbjct: 208 ttggtagatccatggtgatcagcggcgccggc 177
>gb|AY086704.1| Arabidopsis thaliana clone 26907 mRNA, complete sequence Length = 1095 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 taaataacacatattctcaa 23 |||||||||||||||||||| Sbjct: 1004 taaataacacatattctcaa 985
>gb|AF250869.1|AF250869 Buttiauxella sp. PNBS sulfonate binding protein (ssuA) gene, partial cds; sulfonate monooxygenase (ssuD) gene, complete cds; and putative sulfonate transporter permease component (ssuC) gene, partial cds Length = 1879 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 tgccggtgctgctgctggca 221 |||||||||||||||||||| Sbjct: 1695 tgccggtgctgctgctggca 1714
>gb|AF250867.1|AF250867 Pseudomonas sp. Blue1 sulfonate binding protein (ssuA) gene, partial cds; sulfonate monooxygenase (ssuD) gene, complete cds; and putative sulfonate transporter permease component (ssuC) gene, partial cds Length = 1865 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 tgccggtgctgctgctggca 221 |||||||||||||||||||| Sbjct: 1695 tgccggtgctgctgctggca 1714
>dbj|AP003562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1108H10 Length = 136357 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 gctcttccttccagttgccg 346 |||||||||||||||||||| Sbjct: 92861 gctcttccttccagttgccg 92842
>dbj|AB015475.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MMN10 Length = 84325 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 taaataacacatattctcaa 23 |||||||||||||||||||| Sbjct: 55127 taaataacacatattctcaa 55108
>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome Length = 2178400 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 tgccggtgctgctgctggca 221 |||||||||||||||||||| Sbjct: 121427 tgccggtgctgctgctggca 121408
>emb|AL691500.7| Mouse DNA sequence from clone RP23-182H15 on chromosome X, complete sequence Length = 196828 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 ttttgacttcttttttccca 262 |||||||||||||||||||| Sbjct: 76209 ttttgacttcttttttccca 76190 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,879,406 Number of Sequences: 3902068 Number of extensions: 4879406 Number of successful extensions: 100516 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 59 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 100275 Number of HSP's gapped (non-prelim): 239 length of query: 525 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 502 effective length of database: 17,143,297,704 effective search space: 8605935447408 effective search space used: 8605935447408 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)