ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal32i06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PTP2_DICDI (P34138) Tyrosine-protein phosphatase 2 (EC 3.1.3.48)... 33 0.68
2IP25_SOLTU (Q41488) Proteinase inhibitor type-2 P303.51 precurso... 33 0.89
3PTP1_DICDI (P34137) Tyrosine-protein phosphatase 1 (EC 3.1.3.48)... 32 1.2
4PTN13_HUMAN (Q12923) Tyrosine-protein phosphatase non-receptor t... 32 2.0
5PTPRD_MOUSE (Q64487) Receptor-type tyrosine-protein phosphatase ... 31 2.6
6PTN13_MOUSE (Q64512) Tyrosine-protein phosphatase non-receptor t... 31 3.4
7LAR_DROME (P16621) Tyrosine-protein phosphatase Lar precursor (E... 30 4.4
8IP2X_SOLTU (Q00782) Proteinase inhibitor type-2 precursor (Prote... 30 4.4
9IP2K_SOLTU (P01080) Proteinase inhibitor type-2 K precursor (Pro... 30 5.8

>PTP2_DICDI (P34138) Tyrosine-protein phosphatase 2 (EC 3.1.3.48)|
           (Protein-tyrosine-phosphate phosphohydrolase 2) (PTPA)
          Length = 377

 Score = 33.1 bits (74), Expect = 0.68
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = -1

Query: 625 GMVQTEQQYMFCYRAIADELKDLLR 551
           GMVQT  QY FCY AI++ +  +L+
Sbjct: 329 GMVQTRDQYRFCYLAISEAMNTVLK 353



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>IP25_SOLTU (Q41488) Proteinase inhibitor type-2 P303.51 precursor (Proteinase|
           inhibitor type II P303.51)
          Length = 154

 Score = 32.7 bits (73), Expect = 0.89
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +3

Query: 294 KQYKSSTREMDP*FCYY-WPRNSSRRAAYMLWSTRCCKLY*FCYYWSRN 437
           K+ K+  R  DP   Y   PR+  +   Y    T CC  Y  CYY+ +N
Sbjct: 86  KKPKACPRNCDPHIAYSKCPRSEGKSLIYPTGCTTCCTGYKGCYYFGKN 134



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>PTP1_DICDI (P34137) Tyrosine-protein phosphatase 1 (EC 3.1.3.48)|
           (Protein-tyrosine-phosphate phosphohydrolase 1)
          Length = 521

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = -1

Query: 625 GMVQTEQQYMFCYRAIADEL 566
           GMVQ  +QY+FCY+ I DE+
Sbjct: 452 GMVQQLEQYLFCYKTILDEI 471



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>PTN13_HUMAN (Q12923) Tyrosine-protein phosphatase non-receptor type 13 (EC|
            3.1.3.48) (Protein-tyrosine phosphatase 1E) (PTP-E1)
            (hPTPE1) (PTP-BAS) (Protein-tyrosine phosphatase PTPL1)
            (Fas-associated protein-tyrosine phosphatase 1) (FAP-1)
          Length = 2485

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = -1

Query: 625  GMVQTEQQYMFCYRAI 578
            GMVQTE QY+FCY+ I
Sbjct: 2449 GMVQTEDQYIFCYQVI 2464



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>PTPRD_MOUSE (Q64487) Receptor-type tyrosine-protein phosphatase delta precursor|
            (EC 3.1.3.48) (Protein-tyrosine phosphatase delta)
            (R-PTP-delta)
          Length = 1894

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = -1

Query: 622  MVQTEQQYMFCYRAIADEL 566
            MVQTE QY FCYRA  + L
Sbjct: 1868 MVQTEDQYQFCYRAALEYL 1886



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>PTN13_MOUSE (Q64512) Tyrosine-protein phosphatase non-receptor type 13 (EC|
            3.1.3.48) (Protein tyrosine phosphatase PTP-BL)
            (Protein-tyrosine phosphatase RIP) (protein tyrosine
            phosphatase DPZPTP) (PTP36)
          Length = 2453

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = -1

Query: 625  GMVQTEQQYMFCYRAI 578
            GMVQTE QY+FCY+ I
Sbjct: 2416 GMVQTEGQYVFCYQVI 2431



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>LAR_DROME (P16621) Tyrosine-protein phosphatase Lar precursor (EC 3.1.3.48)|
            (Protein-tyrosine-phosphate phosphohydrolase) (dLAR)
          Length = 2029

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = -1

Query: 622  MVQTEQQYMFCYRAIADEL 566
            MVQTE QY FCYRA  + L
Sbjct: 2003 MVQTEDQYHFCYRAALEYL 2021



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>IP2X_SOLTU (Q00782) Proteinase inhibitor type-2 precursor (Proteinase|
           inhibitor type II)
          Length = 158

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = +3

Query: 294 KQYKSSTREMDP*FCYY-WPRNSSRRAAYMLWSTRCCKLY*FCYYWSRN 437
           K  K+  R  DP   Y   PR+  +   Y    T CC  Y  CYY+ ++
Sbjct: 85  KNPKACPRNCDPHIAYSKCPRSGGKTLIYPTGCTTCCTGYTDCYYFGKD 133



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>IP2K_SOLTU (P01080) Proteinase inhibitor type-2 K precursor (Proteinase|
           inhibitor type II K) (IIK) [Contains: Proteinase
           inhibitor PCI-1 (Proteinase inhibitor PCI-I)]
          Length = 153

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = +3

Query: 294 KQYKSSTREMDP*FCYY-WPRNSSRRAAYMLWSTRCCKLY*FCYYWSRN 437
           K+ K+     DP   Y   PR+  +   Y    T CC  Y  CYY+ +N
Sbjct: 85  KKPKACPLNCDPHIAYSKCPRSEGKSLIYPTGCTTCCTGYKGCYYFGKN 133


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,250,983
Number of Sequences: 219361
Number of extensions: 1789248
Number of successful extensions: 3787
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3787
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5710231900
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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