| Clone Name | rbaal32h21 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_478377.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1469 Score = 543 bits (274), Expect = e-151 Identities = 391/430 (90%) Strand = Plus / Minus Query: 195 agggcgtcggcgccagcgacgatctcaaggatctctccggtgatcttggcctggcgtcgg 254 |||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| || Sbjct: 1119 agggcgtcggcgccggcgacgatctcgaggatctcgccggtgatcttggcctggcgctgg 1060 Query: 255 cgattgtagaccatggagagattttttcggagatcgatggcattgtctgtggcgctgctc 314 || ||||||||||||||||| || || ||||| |||||||| ||||| |||||||||||| Sbjct: 1059 cggttgtagaccatggagaggttcttccggagctcgatggcgttgtcggtggcgctgctc 1000 Query: 315 atggcgctcatcctggctgcgagctcgctagcgagcgactcctggagggcacgcaggatc 374 ||||||||||||||||| ||||||||||| ||||||||||||||||| || || |||||| Sbjct: 999 atggcgctcatcctggcggcgagctcgctggcgagcgactcctggagcgcgcggaggatc 940 Query: 375 tggctgttgaggtagagcgggaggagagcgtcgaggatctggacggggtcctgctcgaac 434 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 939 tggctgttgaggtagagcgggaggagcgcgtcgaggatctggacggggtcctgctcgaac 880 Query: 435 tggacgacgggggagaagggctgcatctcgatcttgatcttctcgcgctccacggtgagc 494 || || ||||| |||||||||||| |||||||||| | |||||| ||||||||||| ||| Sbjct: 879 tgcaccacgggtgagaagggctgcgtctcgatcttcaccttctcccgctccacggtcagc 820 Query: 495 ttgccttccttggtggtgagcttgaagagctcgtcctcggtggcgtcgacacagatgccg 554 || |||||||||||||||||| ||| |||||||||||||||||||| || || | |||| Sbjct: 819 ttcccttccttggtggtgagccggaacagctcgtcctcggtggcgtccacgcacacgccg 760 Query: 555 ttgacgtcgcagatctcgcccttaggggacatgggcagcagcgtctggatgatggggtcg 614 |||| |||||||||||| ||||| || |||||||| |||||||||||||||||||||||| Sbjct: 759 ttgatgtcgcagatctcccccttgggcgacatggggagcagcgtctggatgatggggtcg 700 Query: 615 gagcggacga 624 |||||||||| Sbjct: 699 gagcggacga 690 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Minus Query: 1 catttggcatctccgaactgaaatcttatgtatctcgc 38 ||||||||||| | ||| ||||||||| |||||||||| Sbjct: 1354 catttggcatcgctgaattgaaatcttgtgtatctcgc 1317
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 543 bits (274), Expect = e-151 Identities = 391/430 (90%) Strand = Plus / Plus Query: 195 agggcgtcggcgccagcgacgatctcaaggatctctccggtgatcttggcctggcgtcgg 254 |||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| || Sbjct: 19602762 agggcgtcggcgccggcgacgatctcgaggatctcgccggtgatcttggcctggcgctgg 19602821 Query: 255 cgattgtagaccatggagagattttttcggagatcgatggcattgtctgtggcgctgctc 314 || ||||||||||||||||| || || ||||| |||||||| ||||| |||||||||||| Sbjct: 19602822 cggttgtagaccatggagaggttcttccggagctcgatggcgttgtcggtggcgctgctc 19602881 Query: 315 atggcgctcatcctggctgcgagctcgctagcgagcgactcctggagggcacgcaggatc 374 ||||||||||||||||| ||||||||||| ||||||||||||||||| || || |||||| Sbjct: 19602882 atggcgctcatcctggcggcgagctcgctggcgagcgactcctggagcgcgcggaggatc 19602941 Query: 375 tggctgttgaggtagagcgggaggagagcgtcgaggatctggacggggtcctgctcgaac 434 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19602942 tggctgttgaggtagagcgggaggagcgcgtcgaggatctggacggggtcctgctcgaac 19603001 Query: 435 tggacgacgggggagaagggctgcatctcgatcttgatcttctcgcgctccacggtgagc 494 || || ||||| |||||||||||| |||||||||| | |||||| ||||||||||| ||| Sbjct: 19603002 tgcaccacgggtgagaagggctgcgtctcgatcttcaccttctcccgctccacggtcagc 19603061 Query: 495 ttgccttccttggtggtgagcttgaagagctcgtcctcggtggcgtcgacacagatgccg 554 || |||||||||||||||||| ||| |||||||||||||||||||| || || | |||| Sbjct: 19603062 ttcccttccttggtggtgagccggaacagctcgtcctcggtggcgtccacgcacacgccg 19603121 Query: 555 ttgacgtcgcagatctcgcccttaggggacatgggcagcagcgtctggatgatggggtcg 614 |||| |||||||||||| ||||| || |||||||| |||||||||||||||||||||||| Sbjct: 19603122 ttgatgtcgcagatctcccccttgggcgacatggggagcagcgtctggatgatggggtcg 19603181 Query: 615 gagcggacga 624 |||||||||| Sbjct: 19603182 gagcggacga 19603191 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1 catttggcatctccgaactgaaatcttatgtatctcgc 38 ||||||||||| | ||| ||||||||| |||||||||| Sbjct: 19602527 catttggcatcgctgaattgaaatcttgtgtatctcgc 19602564
>dbj|AP005196.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0580A11 Length = 174673 Score = 543 bits (274), Expect = e-151 Identities = 391/430 (90%) Strand = Plus / Plus Query: 195 agggcgtcggcgccagcgacgatctcaaggatctctccggtgatcttggcctggcgtcgg 254 |||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| || Sbjct: 146106 agggcgtcggcgccggcgacgatctcgaggatctcgccggtgatcttggcctggcgctgg 146165 Query: 255 cgattgtagaccatggagagattttttcggagatcgatggcattgtctgtggcgctgctc 314 || ||||||||||||||||| || || ||||| |||||||| ||||| |||||||||||| Sbjct: 146166 cggttgtagaccatggagaggttcttccggagctcgatggcgttgtcggtggcgctgctc 146225 Query: 315 atggcgctcatcctggctgcgagctcgctagcgagcgactcctggagggcacgcaggatc 374 ||||||||||||||||| ||||||||||| ||||||||||||||||| || || |||||| Sbjct: 146226 atggcgctcatcctggcggcgagctcgctggcgagcgactcctggagcgcgcggaggatc 146285 Query: 375 tggctgttgaggtagagcgggaggagagcgtcgaggatctggacggggtcctgctcgaac 434 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 146286 tggctgttgaggtagagcgggaggagcgcgtcgaggatctggacggggtcctgctcgaac 146345 Query: 435 tggacgacgggggagaagggctgcatctcgatcttgatcttctcgcgctccacggtgagc 494 || || ||||| |||||||||||| |||||||||| | |||||| ||||||||||| ||| Sbjct: 146346 tgcaccacgggtgagaagggctgcgtctcgatcttcaccttctcccgctccacggtcagc 146405 Query: 495 ttgccttccttggtggtgagcttgaagagctcgtcctcggtggcgtcgacacagatgccg 554 || |||||||||||||||||| ||| |||||||||||||||||||| || || | |||| Sbjct: 146406 ttcccttccttggtggtgagccggaacagctcgtcctcggtggcgtccacgcacacgccg 146465 Query: 555 ttgacgtcgcagatctcgcccttaggggacatgggcagcagcgtctggatgatggggtcg 614 |||| |||||||||||| ||||| || |||||||| |||||||||||||||||||||||| Sbjct: 146466 ttgatgtcgcagatctcccccttgggcgacatggggagcagcgtctggatgatggggtcg 146525 Query: 615 gagcggacga 624 |||||||||| Sbjct: 146526 gagcggacga 146535 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1 catttggcatctccgaactgaaatcttatgtatctcgc 38 ||||||||||| | ||| ||||||||| |||||||||| Sbjct: 145871 catttggcatcgctgaattgaaatcttgtgtatctcgc 145908
>dbj|AP005176.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0041J06 Length = 138157 Score = 543 bits (274), Expect = e-151 Identities = 391/430 (90%) Strand = Plus / Plus Query: 195 agggcgtcggcgccagcgacgatctcaaggatctctccggtgatcttggcctggcgtcgg 254 |||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| || Sbjct: 41412 agggcgtcggcgccggcgacgatctcgaggatctcgccggtgatcttggcctggcgctgg 41471 Query: 255 cgattgtagaccatggagagattttttcggagatcgatggcattgtctgtggcgctgctc 314 || ||||||||||||||||| || || ||||| |||||||| ||||| |||||||||||| Sbjct: 41472 cggttgtagaccatggagaggttcttccggagctcgatggcgttgtcggtggcgctgctc 41531 Query: 315 atggcgctcatcctggctgcgagctcgctagcgagcgactcctggagggcacgcaggatc 374 ||||||||||||||||| ||||||||||| ||||||||||||||||| || || |||||| Sbjct: 41532 atggcgctcatcctggcggcgagctcgctggcgagcgactcctggagcgcgcggaggatc 41591 Query: 375 tggctgttgaggtagagcgggaggagagcgtcgaggatctggacggggtcctgctcgaac 434 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 41592 tggctgttgaggtagagcgggaggagcgcgtcgaggatctggacggggtcctgctcgaac 41651 Query: 435 tggacgacgggggagaagggctgcatctcgatcttgatcttctcgcgctccacggtgagc 494 || || ||||| |||||||||||| |||||||||| | |||||| ||||||||||| ||| Sbjct: 41652 tgcaccacgggtgagaagggctgcgtctcgatcttcaccttctcccgctccacggtcagc 41711 Query: 495 ttgccttccttggtggtgagcttgaagagctcgtcctcggtggcgtcgacacagatgccg 554 || |||||||||||||||||| ||| |||||||||||||||||||| || || | |||| Sbjct: 41712 ttcccttccttggtggtgagccggaacagctcgtcctcggtggcgtccacgcacacgccg 41771 Query: 555 ttgacgtcgcagatctcgcccttaggggacatgggcagcagcgtctggatgatggggtcg 614 |||| |||||||||||| ||||| || |||||||| |||||||||||||||||||||||| Sbjct: 41772 ttgatgtcgcagatctcccccttgggcgacatggggagcagcgtctggatgatggggtcg 41831 Query: 615 gagcggacga 624 |||||||||| Sbjct: 41832 gagcggacga 41841 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1 catttggcatctccgaactgaaatcttatgtatctcgc 38 ||||||||||| | ||| ||||||||| |||||||||| Sbjct: 41177 catttggcatcgctgaattgaaatcttgtgtatctcgc 41214
>dbj|AK072104.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116B21, full insert sequence Length = 1470 Score = 543 bits (274), Expect = e-151 Identities = 391/430 (90%) Strand = Plus / Minus Query: 195 agggcgtcggcgccagcgacgatctcaaggatctctccggtgatcttggcctggcgtcgg 254 |||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| || Sbjct: 1119 agggcgtcggcgccggcgacgatctcgaggatctcgccggtgatcttggcctggcgctgg 1060 Query: 255 cgattgtagaccatggagagattttttcggagatcgatggcattgtctgtggcgctgctc 314 || ||||||||||||||||| || || ||||| |||||||| ||||| |||||||||||| Sbjct: 1059 cggttgtagaccatggagaggttcttccggagctcgatggcgttgtcggtggcgctgctc 1000 Query: 315 atggcgctcatcctggctgcgagctcgctagcgagcgactcctggagggcacgcaggatc 374 ||||||||||||||||| ||||||||||| ||||||||||||||||| || || |||||| Sbjct: 999 atggcgctcatcctggcggcgagctcgctggcgagcgactcctggagcgcgcggaggatc 940 Query: 375 tggctgttgaggtagagcgggaggagagcgtcgaggatctggacggggtcctgctcgaac 434 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 939 tggctgttgaggtagagcgggaggagcgcgtcgaggatctggacggggtcctgctcgaac 880 Query: 435 tggacgacgggggagaagggctgcatctcgatcttgatcttctcgcgctccacggtgagc 494 || || ||||| |||||||||||| |||||||||| | |||||| ||||||||||| ||| Sbjct: 879 tgcaccacgggtgagaagggctgcgtctcgatcttcaccttctcccgctccacggtcagc 820 Query: 495 ttgccttccttggtggtgagcttgaagagctcgtcctcggtggcgtcgacacagatgccg 554 || |||||||||||||||||| ||| |||||||||||||||||||| || || | |||| Sbjct: 819 ttcccttccttggtggtgagccggaacagctcgtcctcggtggcgtccacgcacacgccg 760 Query: 555 ttgacgtcgcagatctcgcccttaggggacatgggcagcagcgtctggatgatggggtcg 614 |||| |||||||||||| ||||| || |||||||| |||||||||||||||||||||||| Sbjct: 759 ttgatgtcgcagatctcccccttgggcgacatggggagcagcgtctggatgatggggtcg 700 Query: 615 gagcggacga 624 |||||||||| Sbjct: 699 gagcggacga 690 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Minus Query: 1 catttggcatctccgaactgaaatcttatgtatctcgc 38 ||||||||||| | ||| ||||||||| |||||||||| Sbjct: 1355 catttggcatcgctgaattgaaatcttgtgtatctcgc 1318
>dbj|AK105071.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-C11, full insert sequence Length = 2822 Score = 535 bits (270), Expect = e-149 Identities = 390/430 (90%) Strand = Plus / Minus Query: 195 agggcgtcggcgccagcgacgatctcaaggatctctccggtgatcttggcctggcgtcgg 254 |||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| || Sbjct: 2584 agggcgtcggcgccggcgacgatctcgaggatctcgccggtgatcttggcctggcgctgg 2525 Query: 255 cgattgtagaccatggagagattttttcggagatcgatggcattgtctgtggcgctgctc 314 || ||||||||||||||||| || || ||||| |||||||| ||||| |||||||||||| Sbjct: 2524 cggttgtagaccatggagaggttcttccggagctcgatggcgttgtcggtggcgctgctc 2465 Query: 315 atggcgctcatcctggctgcgagctcgctagcgagcgactcctggagggcacgcaggatc 374 ||||||||||||||||| ||||||||||| ||||||||||||||||| || || |||||| Sbjct: 2464 atggcgctcatcctggcggcgagctcgctggcgagcgactcctggagcgcgcggaggatc 2405 Query: 375 tggctgttgaggtagagcgggaggagagcgtcgaggatctggacggggtcctgctcgaac 434 |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| Sbjct: 2404 tggctgttgaggtagagcgggaggagcgcgtcggggatctggacggggtcctgctcgaac 2345 Query: 435 tggacgacgggggagaagggctgcatctcgatcttgatcttctcgcgctccacggtgagc 494 || || ||||| |||||||||||| |||||||||| | |||||| ||||||||||| ||| Sbjct: 2344 tgcaccacgggtgagaagggctgcgtctcgatcttcaccttctcccgctccacggtcagc 2285 Query: 495 ttgccttccttggtggtgagcttgaagagctcgtcctcggtggcgtcgacacagatgccg 554 || |||||||||||||||||| ||| |||||||||||||||||||| || || | |||| Sbjct: 2284 ttcccttccttggtggtgagccggaacagctcgtcctcggtggcgtccacgcacacgccg 2225 Query: 555 ttgacgtcgcagatctcgcccttaggggacatgggcagcagcgtctggatgatggggtcg 614 |||| |||||||||||| ||||| || |||||||| |||||||||||||||||||||||| Sbjct: 2224 ttgatgtcgcagatctcccccttgggcgacatggggagcagcgtctggatgatggggtcg 2165 Query: 615 gagcggacga 624 |||||||||| Sbjct: 2164 gagcggacga 2155 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Minus Query: 1 catttggcatctccgaactgaaatcttatgtatctcgc 38 ||||||||||| | ||| ||||||||| |||||||||| Sbjct: 2819 catttggcatcgctgaattgaaatcttgtgtatctcgc 2782
>dbj|AK064835.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000F20, full insert sequence Length = 1482 Score = 535 bits (270), Expect = e-149 Identities = 390/430 (90%) Strand = Plus / Minus Query: 195 agggcgtcggcgccagcgacgatctcaaggatctctccggtgatcttggcctggcgtcgg 254 |||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| || Sbjct: 1224 agggcgtcggcgccggcgacgatctcgaggatctcgccggtgatcttggcctggcgctgg 1165 Query: 255 cgattgtagaccatggagagattttttcggagatcgatggcattgtctgtggcgctgctc 314 || ||||||||||||||||| || || ||||| |||||||| ||||| |||||||||||| Sbjct: 1164 cggttgtagaccatggagaggttcttccggagctcgatggcgttgtcggtggcgctgctc 1105 Query: 315 atggcgctcatcctggctgcgagctcgctagcgagcgactcctggagggcacgcaggatc 374 ||||||||||||||||| ||||||||||| ||||||||||||||||| || || |||||| Sbjct: 1104 atggcgctcatcctggcggcgagctcgctggcgagcgactcctggagcgcgcggaggatc 1045 Query: 375 tggctgttgaggtagagcgggaggagagcgtcgaggatctggacggggtcctgctcgaac 434 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1044 tggctgttgaggtagagcgggaggagcgcgtcgaggatctggacggggtcctgctcgaac 985 Query: 435 tggacgacgggggagaagggctgcatctcgatcttgatcttctcgcgctccacggtgagc 494 || || ||||| |||||||||||| |||||||||| | |||||| ||| ||||||| ||| Sbjct: 984 tgcaccacgggtgagaagggctgcgtctcgatcttcaccttctcccgccccacggtcagc 925 Query: 495 ttgccttccttggtggtgagcttgaagagctcgtcctcggtggcgtcgacacagatgccg 554 || |||||||||||||||||| ||| |||||||||||||||||||| || || | |||| Sbjct: 924 ttcccttccttggtggtgagccggaacagctcgtcctcggtggcgtccacgcacacgccg 865 Query: 555 ttgacgtcgcagatctcgcccttaggggacatgggcagcagcgtctggatgatggggtcg 614 |||| |||||||||||| ||||| || |||||||| |||||||||||||||||||||||| Sbjct: 864 ttgatgtcgcagatctcccccttgggcgacatggggagcagcgtctggatgatggggtcg 805 Query: 615 gagcggacga 624 |||||||||| Sbjct: 804 gagcggacga 795 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Minus Query: 1 catttggcatctccgaactgaaatcttatgtatctcgc 38 ||||||||||| | ||| ||||||||| |||||||||| Sbjct: 1459 catttggcatcgctgaattgaaatcttgtgtatctcgc 1422
>gb|AY108268.1| Zea mays PCO078526 mRNA sequence Length = 1437 Score = 517 bits (261), Expect = e-143 Identities = 384/425 (90%) Strand = Plus / Minus Query: 195 agggcgtcggcgccagcgacgatctcaaggatctctccggtgatcttggcctggcgtcgg 254 ||||||||||| || ||||||||||| |||||||| |||||||||||||||||||| | Sbjct: 1168 agggcgtcggcaccggcgacgatctcgaggatctccccggtgatcttggcctggcgctgt 1109 Query: 255 cgattgtagaccatggagagattttttcggagatcgatggcattgtctgtggcgctgctc 314 || |||||| | |||||||| || || ||||| |||||||| ||||| |||||||||||| Sbjct: 1108 cggttgtaggcgatggagaggttcttgcggagctcgatggcgttgtcggtggcgctgctc 1049 Query: 315 atggcgctcatcctggctgcgagctcgctagcgagcgactcctggagggcacgcaggatc 374 ||||||||||||| ||| ||||||||||| |||||||||||||| |||||||| |||||| Sbjct: 1048 atggcgctcatccgggcggcgagctcgctggcgagcgactcctgcagggcacggaggatc 989 Query: 375 tggctgttgaggtagagcgggaggagagcgtcgaggatctggacggggtcctgctcgaac 434 ||||||||||||||||||||||| || ||||| |||||||| |||||||||||||||||| Sbjct: 988 tggctgttgaggtagagcgggagcagcgcgtccaggatctgcacggggtcctgctcgaac 929 Query: 435 tggacgacgggggagaagggctgcatctcgatcttgatcttctcgcgctccacggtgagc 494 || || |||||||||||||||||| |||||||||| | |||||||||||||||||||||| Sbjct: 928 tgcaccacgggggagaagggctgcgtctcgatcttcaccttctcgcgctccacggtgagc 869 Query: 495 ttgccttccttggtggtgagcttgaagagctcgtcctcggtggcgtcgacacagatgccg 554 || || |||||||||||||| |||||||||||||||||||||||| || |||| |||| Sbjct: 868 ttcccctccttggtggtgaggcggaagagctcgtcctcggtggcgtccacgcagacgccg 809 Query: 555 ttgacgtcgcagatctcgcccttaggggacatgggcagcagcgtctggatgatggggtcg 614 ||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||| Sbjct: 808 ttgacgtcgcagatctcgcccttgggcgacatggggagcagcgtctggatgatggggtcg 749 Query: 615 gagcg 619 ||||| Sbjct: 748 gagcg 744
>gb|J04219.1|CREATPS C.reinhardtii chloroplast ATP synthase gamma subunit mRNA, complete cds Length = 1772 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Minus Query: 472 tcttctcgcgctccacggtgagcttgccttccttggtggtgagcttgaagagctcgtcct 531 |||||||||||||||||| || || ||| |||||||||| |||||||||| |||||| | Sbjct: 816 tcttctcgcgctccacggcgaactcgccgcccttggtggtcagcttgaagatctcgtcgt 757 Query: 532 cggtggcgtcgacacagatgccgttgacgtcgcagatctcgcccttaggggacatgggca 591 | | |||||| || || |||||| |||||||| | ||||||| | |||| |||||||| Sbjct: 756 cagcggcgtccacgcacttgccgtccacgtcgcacagctcgcccatgggggtcatgggca 697 Query: 592 gcagcgtctggatgatggggt 612 |||| ||||||||| |||||| Sbjct: 696 gcagggtctggatggtggggt 676 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 402 gcgtcgaggatctggacggggtcctgctcgaa 433 ||||| ||||||||| |||| ||||||||||| Sbjct: 886 gcgtccaggatctgggcgggctcctgctcgaa 855
>gb|M73493.1|CREATPC Chlamydomonas reinhardtii ATP synthase (CF1) gamma subunit gene, complete CDS Length = 2913 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Minus Query: 472 tcttctcgcgctccacggtgagcttgccttccttggtggtgagcttgaagagctcgtcct 531 |||||||||||||||||| || || ||| |||||||||| |||||||||| |||||| | Sbjct: 2029 tcttctcgcgctccacggcgaactcgccgcccttggtggtcagcttgaagatctcgtcgt 1970 Query: 532 cggtggcgtcgacacagatgccgttgacgtcgcagatctcgcccttaggggacatgggca 591 | | |||||| || || |||||| |||||||| | ||||||| | |||| |||||||| Sbjct: 1969 cagcggcgtccacgcacttgccgtccacgtcgcacagctcgcccatgggggtcatgggca 1910 Query: 592 gcagcgtctggatgatggggt 612 |||| ||||||||| |||||| Sbjct: 1909 gcagggtctggatggtggggt 1889 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 402 gcgtcgaggatctggacggggtcctgctcgaa 433 ||||| ||||||||| |||| ||||||||||| Sbjct: 2099 gcgtccaggatctgggcgggctcctgctcgaa 2068
>gb|DQ122880.1| Chlamydomonas incerta chloroplast ATP synthase gamma subunit (AtpC) mRNA, partial cds; nuclear gene for chloroplast product Length = 696 Score = 91.7 bits (46), Expect = 3e-15 Identities = 121/146 (82%) Strand = Plus / Minus Query: 472 tcttctcgcgctccacggtgagcttgccttccttggtggtgagcttgaagagctcgtcct 531 |||||||||||||||||| || | ||| |||||||||| |||||||||| ||| || | Sbjct: 463 tcttctcgcgctccacggcgaacgcgccgcccttggtggtcagcttgaagatctcatcgt 404 Query: 532 cggtggcgtcgacacagatgccgttgacgtcgcagatctcgcccttaggggacatgggca 591 ||| |||||| || || |||||| |||||||| | ||||||| | |||| |||||||| Sbjct: 403 cggcggcgtccacgcacttgccgtccacgtcgcacagctcgcccatgggggtcatgggca 344 Query: 592 gcagcgtctggatgatggggtcggag 617 |||| ||||||||| |||||| |||| Sbjct: 343 gcagggtctggatggtggggttggag 318 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 402 gcgtcgaggatctggacggggtcctgctcgaa 433 ||||| ||||||||| |||| ||||||||||| Sbjct: 533 gcgtccaggatctgggcgggctcctgctcgaa 502
>emb|X70650.1|OSATPASE O.sinensis mRNA for gamma subunit of plastid ATPase Length = 1327 Score = 69.9 bits (35), Expect = 1e-08 Identities = 71/83 (85%) Strand = Plus / Minus Query: 351 gactcctggagggcacgcaggatctggctgttgaggtagagcgggaggagagcgtcgagg 410 ||||||||||| | || |||||||||| |||||||||||| ||||||| | || || | Sbjct: 975 gactcctggagcgtgcggaggatctggccgttgaggtagagggggaggatggagttgatg 916 Query: 411 atctggacggggtcctgctcgaa 433 ||||||| ||||||||||||||| Sbjct: 915 atctggatggggtcctgctcgaa 893
>gb|AY826836.1| Isochrysis galbana clone ISATPG1 chloroplast ATP synthase gamma subunit mRNA, partial cds; nuclear gene for chloroplast product Length = 900 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 369 aggatctggctgttgaggtagagcgggagga 399 |||||||||| |||||||||||||||||||| Sbjct: 885 aggatctggccgttgaggtagagcgggagga 855
>gb|AC087888.12| Homo sapiens 12 BAC RP11-228G3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 87788 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 135 aaggaggcaaagagttatatataa 158 |||||||||||||||||||||||| Sbjct: 75558 aaggaggcaaagagttatatataa 75535
>gb|AC114785.5| Homo sapiens BAC clone RP11-607G14 from 2, complete sequence Length = 118022 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 85 tacaaacacagacacagaccaa 106 |||||||||||||||||||||| Sbjct: 7121 tacaaacacagacacagaccaa 7142
>gb|U88181.1| Caenorhabditis elegans cosmid C55B6, complete sequence Length = 25003 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 74 tgagaaattattacaaacaca 94 ||||||||||||||||||||| Sbjct: 19896 tgagaaattattacaaacaca 19876
>gb|AC136222.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088M05, complete sequence Length = 153368 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 agaagagaggagaaaaggagg 141 ||||||||||||||||||||| Sbjct: 140157 agaagagaggagaaaaggagg 140177
>gb|AC129330.4| Mus musculus BAC clone RP23-61B8 from chromosome 8, complete sequence Length = 218698 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 agaagagaggagaaaaggagg 141 ||||||||||||||||||||| Sbjct: 15174 agaagagaggagaaaaggagg 15194
>gb|AC125536.3| Mus musculus BAC clone RP24-142N21 from chromosome 8, complete sequence Length = 199356 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 121 agaagagaggagaaaaggagg 141 ||||||||||||||||||||| Sbjct: 3705 agaagagaggagaaaaggagg 3685
>emb|AL158817.11| Human DNA sequence from clone RP3-429O6 on chromosome 6 Contains part of a novel gene and a CpG island, complete sequence Length = 120529 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 124 agagaggagaaaaggaggcaaagag 148 |||||||||||||||||| |||||| Sbjct: 57721 agagaggagaaaaggaggaaaagag 57697
>gb|AY267622.1| Bigelowiella natans ATP synthase gamma subunit mRNA, complete cds; nuclear gene for plastid product Length = 1351 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Minus Query: 198 gcgtcggcgccagcgacgatctcaaggatctctccggtgatcttggcctggcg 250 ||||| || ||||||||||||||||| || || ||||||||| |||||||| Sbjct: 1174 gcgtctgcaccagcgacgatctcaagaatttcattggtgatcttagcctggcg 1122
>emb|AJ561198.1|NSP561198 Actinomadura sp. ATCC 39727 gene cluster for biosynthesis of glycopeptide antibiotic A40926, strain ATCC 39727 Length = 89153 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 522 agctcgtcctcggtggcgtcg 542 ||||||||||||||||||||| Sbjct: 54302 agctcgtcctcggtggcgtcg 54282
>gb|AC068298.16| Homo sapiens 3 BAC RP11-496B10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 180335 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 gagaggagaaaaggaggcaaa 145 ||||||||||||||||||||| Sbjct: 8264 gagaggagaaaaggaggcaaa 8244
>gb|AC118139.3| Homo sapiens BAC clone RP11-461K12 from 4, complete sequence Length = 54171 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 agaagagaggagaaaaggagg 141 ||||||||||||||||||||| Sbjct: 459 agaagagaggagaaaaggagg 479
>gb|AC107365.2| Danio rerio, clone -241I7, complete sequence Length = 128411 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 121 agaagagaggagaaaaggagg 141 ||||||||||||||||||||| Sbjct: 127553 agaagagaggagaaaaggagg 127533
>gb|DQ337864.1| Uncultured bacterium clone Psedi_nirS-31 NirS (nirS) gene, partial cds Length = 410 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 487 cggtgagcttgccttccttgg 507 ||||||||||||||||||||| Sbjct: 193 cggtgagcttgccttccttgg 173
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 512 gagcttgaagagctcgtcctcggtggcgt 540 |||||||||| ||||||||||||| |||| Sbjct: 2076582 gagcttgaagcgctcgtcctcggtcgcgt 2076610
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 agaagagaggagaaaaggagg 141 ||||||||||||||||||||| Sbjct: 18346945 agaagagaggagaaaaggagg 18346965
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 546 cagatgccgttgacgtcgcag 566 ||||||||||||||||||||| Sbjct: 3383275 cagatgccgttgacgtcgcag 3383255
>gb|AF088219.1|AF088219 Homo sapiens CC chemokine gene cluster, complete sequence Length = 180919 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 gataagtactagaagagagga 131 ||||||||||||||||||||| Sbjct: 90350 gataagtactagaagagagga 90330
>emb|CR382300.12| Zebrafish DNA sequence from clone DKEY-25E11 in linkage group 19, complete sequence Length = 202006 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 agaagagaggagaaaaggagg 141 ||||||||||||||||||||| Sbjct: 35716 agaagagaggagaaaaggagg 35736
>gb|AC006572.2|AC006572 Homo sapiens, clone hRPK.60_A_1, complete sequence Length = 179691 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 agaagagaggagaaaaggagg 141 ||||||||||||||||||||| Sbjct: 178150 agaagagaggagaaaaggagg 178170
>gb|AC004675.1|AC004675 Homo sapiens chromosome 17, clone hCIT.186_H_2, complete sequence Length = 128501 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 gataagtactagaagagagga 131 ||||||||||||||||||||| Sbjct: 88143 gataagtactagaagagagga 88163
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 cggtgagcttgccttccttggtgg 510 |||||| ||||||||||||||||| Sbjct: 2544786 cggtgatcttgccttccttggtgg 2544809
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 cgctgctcatggcgctcatc 326 |||||||||||||||||||| Sbjct: 2764884 cgctgctcatggcgctcatc 2764903
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 tctcgatcttgatcttctcg 479 |||||||||||||||||||| Sbjct: 2806038 tctcgatcttgatcttctcg 2806057
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 tctcgatcttgatcttctcg 479 |||||||||||||||||||| Sbjct: 2294556 tctcgatcttgatcttctcg 2294537
>ref|XM_957789.1| Neurospora crassa OR74A hypothetical protein (NCU06278.1) partial mRNA Length = 3252 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 517 tgaagagctcgtcctcggtggcgtcgac 544 ||||||||| ||||| |||||||||||| Sbjct: 2533 tgaagagctggtccttggtggcgtcgac 2506
>ref|XM_326132.1| Neurospora crassa OR74A hypothetical protein (NCU06278.1) partial mRNA Length = 3252 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 517 tgaagagctcgtcctcggtggcgtcgac 544 ||||||||| ||||| |||||||||||| Sbjct: 2533 tgaagagctggtccttggtggcgtcgac 2506
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 tctcgatcttgatcttctcg 479 |||||||||||||||||||| Sbjct: 1366988 tctcgatcttgatcttctcg 1366969
>gb|AC122903.4| Mus musculus BAC clone RP23-44N5 from chromosome 1, complete sequence Length = 169832 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 ttacaaacacagacacagac 103 |||||||||||||||||||| Sbjct: 134653 ttacaaacacagacacagac 134672
>gb|AY363103.1|AY363102S2 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, exons 6 through 10 and partial cds Length = 688489 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 tacaaacacagacacagacc 104 |||||||||||||||||||| Sbjct: 401220 tacaaacacagacacagacc 401239
>emb|Z81119.1|CET10H4 Caenorhabditis elegans Cosmid T10H4, complete sequence Length = 33319 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 agaaattattacaaacacag 95 |||||||||||||||||||| Sbjct: 12793 agaaattattacaaacacag 12812
>gb|AC126686.3| Mus musculus BAC clone RP23-148C24 from 18, complete sequence Length = 232817 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 aggagaaaaggaggcaaaga 147 |||||||||||||||||||| Sbjct: 78802 aggagaaaaggaggcaaaga 78783
>gb|AC118351.14| Rattus norvegicus 1 BAC CH230-362O18 (Children's Hospital Oakland Research Institute) complete sequence Length = 143705 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 ggagaaaaggaggcaaagag 148 |||||||||||||||||||| Sbjct: 125135 ggagaaaaggaggcaaagag 125116
>emb|AL365214.16| Human DNA sequence from clone RP11-506B6 on chromosome 6 Contains a fem-1 homolog a (C. elegans) (FEM1A) pseudogene, a keratin 18 (KRT18) pseudogene, a laminin receptor 1 (67kD, ribosomal protein SA) (LAMR1)(RPSA) pseudogene, a hepatocellular carcinoma-related putative tumor suppressor (LPTS) pseudogene and the 3' end of a novel gene, complete sequence Length = 210107 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 tactagaagagaggagaaaa 136 |||||||||||||||||||| Sbjct: 191747 tactagaagagaggagaaaa 191728
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 tctcgatcttgatcttctcg 479 |||||||||||||||||||| Sbjct: 1245988 tctcgatcttgatcttctcg 1245969 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 cagggcgtcggcgccagcga 213 |||||||||||||||||||| Sbjct: 1196169 cagggcgtcggcgccagcga 1196188
>emb|BX053660.1|CNS09DKG Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC31BH07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 387 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 589 gcagcagcgtctggatgatg 608 |||||||||||||||||||| Sbjct: 284 gcagcagcgtctggatgatg 303
>emb|BX053659.1|CNS09DKF Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC31BH07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 567 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 589 gcagcagcgtctggatgatg 608 |||||||||||||||||||| Sbjct: 490 gcagcagcgtctggatgatg 471
>gb|AC154570.2| Mus musculus BAC clone RP23-385M5 from chromosome 14, complete sequence Length = 209218 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 tacaaacacagacacagacc 104 |||||||||||||||||||| Sbjct: 108436 tacaaacacagacacagacc 108417
>gb|AC006454.4| Homo sapiens PAC clone RP5-852P6 from 7, complete sequence Length = 153203 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 gcagctcagcccagggagga 183 |||||||||||||||||||| Sbjct: 13876 gcagctcagcccagggagga 13857
>emb|BX927151.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete genome; segment 4/10 Length = 349459 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 459 atctcgatcttgatcttctc 478 |||||||||||||||||||| Sbjct: 184390 atctcgatcttgatcttctc 184409
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 tctcgatcttgatcttctcg 479 |||||||||||||||||||| Sbjct: 1238910 tctcgatcttgatcttctcg 1238891
>emb|AL929280.6| Mouse DNA sequence from clone RP23-67M20 on chromosome 11 Contains a novel gene (2810471M01Rik), the 5' end of the gene for a novel protein (E030025D05Rik) and a CpG island, complete sequence Length = 216627 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 acacagacacagaccaagca 109 |||||||||||||||||||| Sbjct: 113992 acacagacacagaccaagca 113973
>emb|AL663060.6| Mouse DNA sequence from clone RP23-239H6 on chromosome 11, complete sequence Length = 218635 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 acacagaccaagcaagataa 115 |||||||||||||||||||| Sbjct: 54294 acacagaccaagcaagataa 54275
>gb|AC011193.3| Homo sapiens chromosome 17, clone RP11-521P1, complete sequence Length = 181022 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 gaagagaggagaaaaggagg 141 |||||||||||||||||||| Sbjct: 27254 gaagagaggagaaaaggagg 27235
>gb|AC073761.4| Mus musculus chromosome 17 clone RP23-33K21, complete sequence Length = 206801 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 agaggagaaaaggaggcaaagagt 149 ||||||||||||||| |||||||| Sbjct: 3628 agaggagaaaaggagtcaaagagt 3605
>gb|AC092745.7| Homo sapiens 12 BAC RP11-90D4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 152599 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 ctcatggcgctcatcctggc 331 |||||||||||||||||||| Sbjct: 39643 ctcatggcgctcatcctggc 39624
>gb|AC092111.9| Homo sapiens 12 BAC RP11-266K4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 138313 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 ctcatggcgctcatcctggc 331 |||||||||||||||||||| Sbjct: 114733 ctcatggcgctcatcctggc 114714
>dbj|AB232920.1| Oryzias latipes hox gene cluster, complete cds, contains hoxBa, evx homologue on hoxBa Length = 235883 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 agaagagaggagaaaaggag 140 |||||||||||||||||||| Sbjct: 76918 agaagagaggagaaaaggag 76937
>gb|AC175781.3| Cavia porcellus clone CH234-402D11, complete sequence Length = 183894 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 gaagagaggagaaaaggagg 141 |||||||||||||||||||| Sbjct: 48112 gaagagaggagaaaaggagg 48131
>gb|DQ337883.1| Uncultured bacterium clone S1m_nirS-22 NirS (nirS) gene, partial cds Length = 410 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 488 ggtgagcttgccttccttgg 507 |||||||||||||||||||| Sbjct: 192 ggtgagcttgccttccttgg 173
>gb|DQ337869.1| Uncultured bacterium clone Psedi_nirS-41 NirS (nirS) gene, partial cds Length = 413 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 490 tgagcttgccttccttggtg 509 |||||||||||||||||||| Sbjct: 190 tgagcttgccttccttggtg 171
>gb|DQ337840.1| Uncultured bacterium clone P1m_nirS-15 NirS (nirS) gene, partial cds Length = 413 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 490 tgagcttgccttccttggtg 509 |||||||||||||||||||| Sbjct: 190 tgagcttgccttccttggtg 171
>gb|AC122754.13| Mus musculus chromosome 1, clone RP24-510K10, complete sequence Length = 227950 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 gaaaaggaggcaaagagtta 151 |||||||||||||||||||| Sbjct: 105449 gaaaaggaggcaaagagtta 105468
>gb|AC157870.3| Loxodonta africana clone VMRC15-210D1, complete sequence Length = 123158 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 493 gcttgccttccttggtggtg 512 |||||||||||||||||||| Sbjct: 49361 gcttgccttccttggtggtg 49342
>dbj|AK051229.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130019J16 product:unclassifiable, full insert sequence Length = 2020 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 ttacaaacacagacacagac 103 |||||||||||||||||||| Sbjct: 511 ttacaaacacagacacagac 492
>gb|AC012336.9|AC012336 Homo sapiens chromosome 17, clone CTD-2236G12, complete sequence Length = 40405 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 gaagagaggagaaaaggagg 141 |||||||||||||||||||| Sbjct: 10132 gaagagaggagaaaaggagg 10151
>dbj|AK037782.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130049I01 product:unclassifiable, full insert sequence Length = 1553 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 ttacaaacacagacacagac 103 |||||||||||||||||||| Sbjct: 649 ttacaaacacagacacagac 630
>dbj|AK043901.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830048L15 product:unclassifiable, full insert sequence Length = 1373 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 aagagaggagaaaaggaggcaaag 146 |||||||||||| ||||||||||| Sbjct: 729 aagagaggagaagaggaggcaaag 706
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 tacaaacacagacacagacc 104 |||||||||||||||||||| Sbjct: 21304663 tacaaacacagacacagacc 21304682 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 acatccttttttgtgctatg 75 |||||||||||||||||||| Sbjct: 19087865 acatccttttttgtgctatg 19087846
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 ctagaagagaggagaaaagg 138 |||||||||||||||||||| Sbjct: 20600956 ctagaagagaggagaaaagg 20600937
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome Length = 3309401 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 459 atctcgatcttgatcttctc 478 |||||||||||||||||||| Sbjct: 1229205 atctcgatcttgatcttctc 1229224
>gb|AC105916.4| Homo sapiens BAC clone RP11-180A12 from 4, complete sequence Length = 104269 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ggcagctcagcccagggagg 182 |||||||||||||||||||| Sbjct: 81855 ggcagctcagcccagggagg 81874
>emb|AL929073.19| Mouse DNA sequence from clone RP23-125D6 on chromosome 4, complete sequence Length = 129246 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 gaagagaggagaaaaggagg 141 |||||||||||||||||||| Sbjct: 16741 gaagagaggagaaaaggagg 16760
>dbj|AP003714.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0656E03 Length = 181786 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 tacaaacacagacacagacc 104 |||||||||||||||||||| Sbjct: 100039 tacaaacacagacacagacc 100058
>dbj|AP004328.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1616_B03 Length = 96081 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 acatccttttttgtgctatg 75 |||||||||||||||||||| Sbjct: 85349 acatccttttttgtgctatg 85330
>dbj|AP005611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0051E21 Length = 137959 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 ctagaagagaggagaaaagg 138 |||||||||||||||||||| Sbjct: 96514 ctagaagagaggagaaaagg 96495
>dbj|AK121910.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105O17, full insert sequence Length = 1563 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 acatccttttttgtgctatg 75 |||||||||||||||||||| Sbjct: 859 acatccttttttgtgctatg 840
>dbj|AK101846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069I17, full insert sequence Length = 3061 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 acatccttttttgtgctatg 75 |||||||||||||||||||| Sbjct: 865 acatccttttttgtgctatg 846
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 tctcgatcttgatcttctcg 479 |||||||||||||||||||| Sbjct: 1065662 tctcgatcttgatcttctcg 1065643
>gb|AC154142.24| Mus musculus chromosome 1, clone RP23-187M7, complete sequence Length = 237824 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 gaaaaggaggcaaagagtta 151 |||||||||||||||||||| Sbjct: 188353 gaaaaggaggcaaagagtta 188372
>emb|AL845291.5| Mouse DNA sequence from clone RP23-1O11 on chromosome 2, complete sequence Length = 209914 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 aagagaggagaaaaggaggcaaag 146 |||||||||||| ||||||||||| Sbjct: 178379 aagagaggagaagaggaggcaaag 178356
>dbj|AB032374.1| Mus musculus gene for Tbr1, 5' flanking region Length = 4570 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 aagagaggagaaaaggaggcaaag 146 |||||||||||| ||||||||||| Sbjct: 3905 aagagaggagaagaggaggcaaag 3882
>dbj|AB015309.1| Acidovorax sp. TP4 gene for PHB depolymerase, complete cds Length = 3846 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 gtggcgctgctcatggcgct 322 |||||||||||||||||||| Sbjct: 2294 gtggcgctgctcatggcgct 2313 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,178,689 Number of Sequences: 3902068 Number of extensions: 5178689 Number of successful extensions: 137680 Number of sequences better than 10.0: 85 Number of HSP's better than 10.0 without gapping: 85 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 136728 Number of HSP's gapped (non-prelim): 952 length of query: 624 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 601 effective length of database: 17,143,297,704 effective search space: 10303121920104 effective search space used: 10303121920104 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)