| Clone Name | rbaal32h16 |
|---|---|
| Clone Library Name | barley_pub |
>CCNB1_SOYBN (P25011) G2/mitotic-specific cyclin S13-6 (B-like cyclin)| Length = 454 Score = 37.7 bits (86), Expect = 0.026 Identities = 32/84 (38%), Positives = 38/84 (45%), Gaps = 18/84 (21%) Frame = -2 Query: 520 GRKHARDRDIGNVVHDSKIQLPAGTNRPLTRRLGAQLLKKAQA---------NPCKNSVV 368 GR DIGN+ + + + A NRP+TR GAQLL AQA C N V Sbjct: 31 GRNRKALGDIGNLANVRGV-VDAKPNRPITRSFGAQLLANAQAAAAADNSKRQACAN-VA 88 Query: 367 VPPAA---------RVTLKPVNKK 323 PPA R KPV+KK Sbjct: 89 GPPAVANEGVAVAKRAAPKPVSKK 112
>SYN1_CANFA (O62732) Synapsin-1 (Synapsin I) (Fragment)| Length = 415 Score = 33.1 bits (74), Expect = 0.65 Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 4/93 (4%) Frame = -2 Query: 556 QGSPRRRQPPWCGRKHARDRDIGNVVHDSKIQ-LPAGTNRPLTRRLGAQLLKKAQ---AN 389 QG P +++PP G++H +G Q LP+ T+ P AQ L +AQ + Sbjct: 205 QGPPLQQRPPPQGQQHLSG--LGPPAGSPLPQRLPSPTSAPQQPVSQAQPLSQAQGRQSR 262 Query: 388 PCKNSVVVPPAARVTLKPVNKKQSNAGDGCRET 290 P PPAAR P ++Q+ R+T Sbjct: 263 PVAGGPGAPPAARPPASPSPQRQAGPPQATRQT 295
>VAV2_HUMAN (P52735) Protein vav-2| Length = 878 Score = 32.3 bits (72), Expect = 1.1 Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 9/87 (10%) Frame = -1 Query: 329 QEAIQCWGWLQGNMNSGSKIEDTKYKITSFQGRV---------LGAPMIQGKWYLKPVIN 177 +EA++ L +N + ++T KI+ FQ + G P I G+ ++ ++N Sbjct: 360 KEALEAMQDLAMYINEVKRDKETLRKISEFQSSIENLQVKLEEFGRPKIDGELKVRSIVN 419 Query: 176 HEGC*LWLSYFNNVLVSCHSRVTKYNM 96 H +L F+ V++ C + Y + Sbjct: 420 HTKQDRYLFLFDKVVIVCKRKGYSYEL 446
>YMBA_SHIFL (P0AB11) Hypothetical protein ymbA| Length = 182 Score = 32.3 bits (72), Expect = 1.1 Identities = 14/47 (29%), Positives = 24/47 (51%) Frame = -1 Query: 308 GWLQGNMNSGSKIEDTKYKITSFQGRVLGAPMIQGKWYLKPVINHEG 168 GW+ + GS + +T F GR G ++ G+W ++NH+G Sbjct: 96 GWVVASQPLGSAQDTLNVTVTEFNGRYDGKVIVSGEW----LLNHQG 138
>YMBA_ECOLI (P0AB10) Hypothetical protein ymbA| Length = 182 Score = 32.3 bits (72), Expect = 1.1 Identities = 14/47 (29%), Positives = 24/47 (51%) Frame = -1 Query: 308 GWLQGNMNSGSKIEDTKYKITSFQGRVLGAPMIQGKWYLKPVINHEG 168 GW+ + GS + +T F GR G ++ G+W ++NH+G Sbjct: 96 GWVVASQPLGSAQDTLNVTVTEFNGRYDGKVIVSGEW----LLNHQG 138
>VAV2_MOUSE (Q60992) Protein vav-2| Length = 868 Score = 31.2 bits (69), Expect = 2.5 Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 9/87 (10%) Frame = -1 Query: 329 QEAIQCWGWLQGNMNSGSKIEDTKYKITSFQGRV---------LGAPMIQGKWYLKPVIN 177 +EA++ L +N + ++T KI+ FQ + G P I G+ ++ ++N Sbjct: 355 KEALEAMQDLAMYINEVKRDKETLKKISEFQCSIENLQVKLEEFGRPKIDGELKVRSIVN 414 Query: 176 HEGC*LWLSYFNNVLVSCHSRVTKYNM 96 H +L F+ V++ C + Y + Sbjct: 415 HTKQDRYLFLFDKVVIVCKRKGYSYEL 441
>S26A3_RAT (Q924C9) Chloride anion exchanger (DRA protein) (Down-regulated in| adenoma) (Solute carrier family 26 member 3) Length = 757 Score = 30.4 bits (67), Expect = 4.2 Identities = 14/40 (35%), Positives = 23/40 (57%) Frame = +3 Query: 255 ILCIFYFGSRVHVSLQPSPALDCFLFTGLRVTRAAGGTTT 374 ++ F+ G+ H+S+ P P L + G+ VTR A G+ T Sbjct: 113 VITYFFLGTSRHISVGPFPVLS--MMVGVVVTRVASGSDT 150
>UBIG_BORPE (Q7VZG7) 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64)| (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase) (DHHB methyltransferase) Length = 241 Score = 30.0 bits (66), Expect = 5.5 Identities = 19/65 (29%), Positives = 33/65 (50%) Frame = +2 Query: 404 LQELSAQPPGEWSIGPCR*LDLAVVDNVANVPITCMFPPAPGRLTPARAALSSPGGTATQ 583 ++EL+A+ PG++ + C + ++++V P P + A AAL+ PGG Sbjct: 114 VEELAAEQPGQYDVVTC----MEMLEHV----------PDPASVVRACAALAKPGGWVFF 159 Query: 584 GGLNR 598 LNR Sbjct: 160 STLNR 164
>COL6_CAEEL (P18831) Cuticle collagen 6 (Protein roller-8)| Length = 329 Score = 30.0 bits (66), Expect = 5.5 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = -2 Query: 589 SSLCCGTTRGAQGSPRRRQPPWCGRKHARDRDIGNVVHDSKIQLPAGTNRP 437 +++CC +GA G P PP K R+ + G D+++ LPA + P Sbjct: 133 AAVCCTCNQGAAGPPGPEGPPGNDGKDGRNGNDGKNGRDAEV-LPAPASEP 182
>NU2M_PICCA (P48906) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH| dehydrogenase subunit 2) Length = 567 Score = 30.0 bits (66), Expect = 5.5 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%) Frame = +2 Query: 248 LFYTLYLLFWIQSSCFPATIPSIGLLLVYWLEGYPRCWRNNYAVLAW--IGLGLLQELSA 421 + Y + LL++I S+ F I I L +Y + NN ++ W I +GLL ++ A Sbjct: 202 ILYGISLLYYITSNIFINNINLIYSLDIYNI--------NNNILIGWLFIIIGLLIKIGA 253 Query: 422 QPPGEWSI 445 P WSI Sbjct: 254 APMYNWSI 261
>MYO15_MOUSE (Q9QZZ4) Myosin-15 (Myosin XV) (Unconventional myosin-15)| Length = 3511 Score = 30.0 bits (66), Expect = 5.5 Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 15/76 (19%) Frame = -2 Query: 538 RQPPWCGRKHARDRDIGNVV------HDSKIQLPAGTNRPLTRRLGAQLLKKAQA----- 392 +QPPW G AR D G V H+ + + G L G Q+ ++A A Sbjct: 2565 KQPPWAGHPEARRTDGGKVFRRPPDPHEEALMILKGQKTQLAVVPGTQVSREAVAMVKPV 2624 Query: 391 ----NPCKNSVVVPPA 356 PC V P+ Sbjct: 2625 TSAPRPCMGPTPVQPS 2640
>GR64D_DROME (Q9VZJ6) Putative gustatory receptor 64d| Length = 429 Score = 29.6 bits (65), Expect = 7.2 Identities = 17/45 (37%), Positives = 24/45 (53%) Frame = +3 Query: 162 LASFMVYHWLQVPLALNHGGSQYTPLK*SYFILCIFYFGSRVHVS 296 +A FM L + LN G YT S+ ++CIF FGS + +S Sbjct: 73 IADFM----LSTKIVLNDGLQLYTMGSLSFSVICIFCFGSFIKLS 113
>ISPH_FRATT (Q5NGK4) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC| 1.17.1.2) Length = 318 Score = 29.3 bits (64), Expect = 9.4 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +3 Query: 15 MHTNKXPVIILHNILHTKVEVVSLRKWHVV 104 + K PV + H ++H KV V SL+K VV Sbjct: 26 LEVEKSPVYVRHEVVHNKVVVDSLKKKGVV 55
>PAK7_HUMAN (Q9P286) Serine/threonine-protein kinase PAK 7 (EC 2.7.11.1)| (p21-activated kinase 7) (PAK-7) (PAK-5) Length = 719 Score = 29.3 bits (64), Expect = 9.4 Identities = 25/65 (38%), Positives = 29/65 (44%) Frame = +2 Query: 26 QGPCHYSSQHTTYKS*SGFFKKMACCTLSLLSGN*QARC*SRITTISILHGLSLASSTTC 205 Q YSS Y S G+ K SL S + I+T S L LSL+SST Sbjct: 361 QSKSGYSSSSHQYPS--GYHKATLYHHPSLQSSS------QYISTASYLSSLSLSSSTYP 412 Query: 206 PESWG 220 P SWG Sbjct: 413 PPSWG 417 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 99,320,177 Number of Sequences: 219361 Number of extensions: 2295624 Number of successful extensions: 6189 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 5929 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6185 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5424720305 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)