ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal8d05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467358.1| Oryza sativa (japonica cultivar-group), mRNA 82 3e-12
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 82 3e-12
3dbj|AP005825.3| Oryza sativa (japonica cultivar-group) genomic D... 82 3e-12
4dbj|AK058932.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 3e-12
5ref|XM_476072.1| Oryza sativa (japonica cultivar-group), predic... 40 9.5
6gb|AE017142.1| Yersinia pestis biovar Medievalis str. 91001 sect... 40 9.5
7gb|AC005711.2| Drosophila melanogaster clone BACR48M09, complete... 40 9.5
8gb|AC009214.8| Drosophila melanogaster clone BACR05E09, complete... 40 9.5
9gb|AC118025.18| Mus musculus chromosome 6, clone RP23-461L9, com... 40 9.5
10gb|AE009952.1| Yersinia pestis KIM, complete genome 40 9.5
11gb|BT014508.1| Lycopersicon esculentum clone 133886R, mRNA sequence 40 9.5
12gb|AC139341.3| Atelerix albiventris clone LB4-464N6, complete se... 40 9.5
13emb|AJ841924.1| Brassica juncea partial rt gene for reverse tran... 40 9.5
14ref|XM_390518.1| Gibberella zeae PH-1 chromosome 1 predicted pro... 40 9.5
15gb|AC122533.4| Mus musculus BAC clone RP24-538L1 from chromosome... 40 9.5
16emb|AL512637.18| Human DNA sequence from clone RP11-551G24 on ch... 40 9.5
17emb|AL137067.7| Human DNA sequence from clone RP11-13B9 on chrom... 40 9.5
18emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, comp... 40 9.5
19emb|BX897674.1| Neurospora crassa DNA linkage group IV BAC clone... 40 9.5
20emb|AJ414158.1| Yersinia pestis strain CO92 complete genome; seg... 40 9.5
21emb|AL591143.11| Mouse DNA sequence from clone RP23-210L24 on ch... 40 9.5
22emb|AL929431.15| Mouse DNA sequence from clone RP24-225E17 on ch... 40 9.5
23gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 9.5
24emb|CR858826.1| Pongo pygmaeus mRNA; cDNA DKFZp469G054 (from clo... 40 9.5
25gb|AC113280.12| Mus musculus chromosome 1, clone RP23-391E12, co... 40 9.5
26gb|AC097065.2| Homo sapiens chromosome 1 clone RP11-532L16, comp... 40 9.5
27gb|AC008900.5| Homo sapiens chromosome 5 clone CTD-2242C17, comp... 40 9.5
28gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold 40 9.5
29gb|AC026230.5|AC026230 Homo sapiens chromosome 5 clone CTD-2288O... 40 9.5
30gb|AC111099.15| Mus musculus chromosome 1, clone RP23-177A20, co... 40 9.5
31dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
32dbj|AK222285.1| Ciona intestinalis cDNA, clone:cicl041p23, full ... 40 9.5
33dbj|AB210748.1| Ciona intestinalis mRNA for Wnt signaling ligand... 40 9.5
34gb|AC093901.2| Homo sapiens BAC clone RP11-730J4 from 2, complet... 40 9.5
35gb|AC008910.5|AC008910 Homo sapiens chromosome 5 clone CTD-2267A... 40 9.5
36emb|BX072583.7| Zebrafish DNA sequence from clone CH211-185M2 in... 40 9.5
37dbj|AK103126.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.5
38emb|CT573036.11| Mouse DNA sequence from clone RP24-376I11 on ch... 40 9.5
39dbj|AK058440.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.5
40gb|AE003636.4| Drosophila melanogaster chromosome 2L, section 45... 40 9.5
41emb|Z27078.4|CEK04H4 Caenorhabditis elegans Cosmid K04H4, comple... 40 9.5
42gb|AC144761.4| Mus musculus BAC clone RP24-303C2 from 1, complet... 40 9.5
43gb|AC122318.4| Mus musculus BAC clone RP23-306H2 from 16, comple... 40 9.5
44gb|AC093954.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.5
45dbj|AB026564.1| Oryza sativa (japonica cultivar-group) OsPBB1 mR... 40 9.5 
>ref|XM_467358.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2385

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 86/101 (85%)
 Strand = Plus / Minus

                                                                        
Query: 589  ctgatagacgggagagtgggttggctgaagccgaggccggaaaccccatctagggaacca 648
            ||||| ||||| ||||||||||| |||||||| ||||| || |||||||| |  ||||||
Sbjct: 2381 ctgatggacggcagagtgggttgactgaagccaaggccagacaccccatccaaagaacca 2322

                                                     
Query: 649  ggtgcaacatgttttacttgtccataccgcctgatatgacg 689
            ||  | |||||||| ||||| ||||| ||||||||||||||
Sbjct: 2321 ggcactacatgtttcacttgcccatatcgcctgatatgacg 2281
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 86/101 (85%)
 Strand = Plus / Plus

                                                                            
Query: 589      ctgatagacgggagagtgggttggctgaagccgaggccggaaaccccatctagggaacca 648
                ||||| ||||| ||||||||||| |||||||| ||||| || |||||||| |  ||||||
Sbjct: 29078389 ctgatggacggcagagtgggttgactgaagccaaggccagacaccccatccaaagaacca 29078448

                                                         
Query: 649      ggtgcaacatgttttacttgtccataccgcctgatatgacg 689
                ||  | |||||||| ||||| ||||| ||||||||||||||
Sbjct: 29078449 ggcactacatgtttcacttgcccatatcgcctgatatgacg 29078489
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>dbj|AP005825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0724B10
          Length = 169143

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 86/101 (85%)
 Strand = Plus / Plus

                                                                          
Query: 589    ctgatagacgggagagtgggttggctgaagccgaggccggaaaccccatctagggaacca 648
              ||||| ||||| ||||||||||| |||||||| ||||| || |||||||| |  ||||||
Sbjct: 124554 ctgatggacggcagagtgggttgactgaagccaaggccagacaccccatccaaagaacca 124613

                                                       
Query: 649    ggtgcaacatgttttacttgtccataccgcctgatatgacg 689
              ||  | |||||||| ||||| ||||| ||||||||||||||
Sbjct: 124614 ggcactacatgtttcacttgcccatatcgcctgatatgacg 124654
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>dbj|AK058932.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-D09, full
           insert sequence
          Length = 1488

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 86/101 (85%)
 Strand = Plus / Minus

                                                                       
Query: 589 ctgatagacgggagagtgggttggctgaagccgaggccggaaaccccatctagggaacca 648
           ||||| ||||| ||||||||||| |||||||| ||||| || |||||||| |  ||||||
Sbjct: 992 ctgatggacggcagagtgggttgactgaagccaaggccagacaccccatccaaagaacca 933

                                                    
Query: 649 ggtgcaacatgttttacttgtccataccgcctgatatgacg 689
           ||  | |||||||| ||||| ||||| ||||||||||||||
Sbjct: 932 ggcactacatgtttcacttgcccatatcgcctgatatgacg 892
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>ref|XM_476072.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 819

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 403 ttctcaagtactctgtcttc 422
           ||||||||||||||||||||
Sbjct: 676 ttctcaagtactctgtcttc 657
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>gb|AE017142.1| Yersinia pestis biovar Medievalis str. 91001 section 16 of 16 of the
             complete genome
          Length = 229338

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 608   gttggctgaagccgaggccg 627
             ||||||||||||||||||||
Sbjct: 19825 gttggctgaagccgaggccg 19806
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>gb|AC005711.2| Drosophila melanogaster clone BACR48M09, complete sequence
          Length = 165267

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 666    ttgtccataccgcctgatat 685
              ||||||||||||||||||||
Sbjct: 145803 ttgtccataccgcctgatat 145784
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>gb|AC009214.8| Drosophila melanogaster clone BACR05E09, complete sequence
          Length = 154772

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 666    ttgtccataccgcctgatat 685
              ||||||||||||||||||||
Sbjct: 137718 ttgtccataccgcctgatat 137737
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>gb|AC118025.18| Mus musculus chromosome 6, clone RP23-461L9, complete sequence
          Length = 198895

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 476    accttcagttctttcaatga 495
              ||||||||||||||||||||
Sbjct: 158084 accttcagttctttcaatga 158103
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>gb|AE009952.1| Yersinia pestis KIM, complete genome
          Length = 4600755

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 608    gttggctgaagccgaggccg 627
              ||||||||||||||||||||
Sbjct: 183810 gttggctgaagccgaggccg 183791
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>gb|BT014508.1| Lycopersicon esculentum clone 133886R, mRNA sequence
          Length = 2096

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 381  tccaccaatttctcttcata 400
            ||||||||||||||||||||
Sbjct: 1631 tccaccaatttctcttcata 1612
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>gb|AC139341.3| Atelerix albiventris clone LB4-464N6, complete sequence
          Length = 195266

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 333    agttgtctcaaagataacca 352
              ||||||||||||||||||||
Sbjct: 108537 agttgtctcaaagataacca 108556
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>emb|AJ841924.1| Brassica juncea partial rt gene for reverse transciptase, clone
           Bjco11
          Length = 263

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 414 tctgtcttcttcacagatcg 433
           ||||||||||||||||||||
Sbjct: 86  tctgtcttcttcacagatcg 105
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>ref|XM_390518.1| Gibberella zeae PH-1 chromosome 1 predicted protein (FG10342.1)
            partial mRNA
          Length = 1866

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 528  acatgctcgtatgagcatat 547
            ||||||||||||||||||||
Sbjct: 1180 acatgctcgtatgagcatat 1199
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>gb|AC122533.4| Mus musculus BAC clone RP24-538L1 from chromosome 13, complete sequence
          Length = 159734

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 133   gttaatttactacacgtctgtgtt 156
             ||||||||||||||||||| ||||
Sbjct: 76722 gttaatttactacacgtctttgtt 76745
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>emb|AL512637.18| Human DNA sequence from clone RP11-551G24 on chromosome 1 Contains part
             of the gene for zinc finger protein (SBZF3) (FLJ44402), a
             pseudogene similar to part of zinc finger protein
             (ZNF519), the 3' end of the gene for a novel protein
             similar to zinc finger protein (FLJ90293), a primase
             polypeptide 1 49kDa (PRIM1) pseudogene and two CpG
             islands, complete sequence
          Length = 68083

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   tggggtatcaatgtcaacaa 175
             ||||||||||||||||||||
Sbjct: 61295 tggggtatcaatgtcaacaa 61314
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>emb|AL137067.7| Human DNA sequence from clone RP11-13B9 on chromosome 9q22.32-31.3
             Contains a gene for a novel protein similar to a
             glycosyltransferase, the gene for protein translocation
             complex beta (SEC61B), a novel gene for a protein similar
             to cytokeratin 8 (KRT8)and a CpG island, complete sequence
          Length = 197169

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 207   tcttccttctgctgaatgaa 226
             ||||||||||||||||||||
Sbjct: 40712 tcttccttctgctgaatgaa 40693
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>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence
          Length = 4744671

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 608     gttggctgaagccgaggccg 627
               ||||||||||||||||||||
Sbjct: 4214977 gttggctgaagccgaggccg 4214958
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>emb|BX897674.1| Neurospora crassa DNA linkage group IV BAC clone B2N18
          Length = 113778

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 389   tttctcttcatatcttctcaagtactct 416
             ||||||||||| ||||||||| ||||||
Sbjct: 97571 tttctcttcatttcttctcaaatactct 97544
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>emb|AJ414158.1| Yersinia pestis strain CO92 complete genome; segment 18/20
          Length = 235050

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 608    gttggctgaagccgaggccg 627
              ||||||||||||||||||||
Sbjct: 103480 gttggctgaagccgaggccg 103499
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>emb|AL591143.11| Mouse DNA sequence from clone RP23-210L24 on chromosome 11 Contains the
             5' end of the Abr gene for active BCR-related protein, a
             ribosomal protein L18 (Rpl18) pseudogene, a ribosomal
             protein L36 (Rpl36) pseudogene and four CpG islands,
             complete sequence
          Length = 212940

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 473   tcaaccttcagttctttcaa 492
             ||||||||||||||||||||
Sbjct: 93568 tcaaccttcagttctttcaa 93587
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>emb|AL929431.15| Mouse DNA sequence from clone RP24-225E17 on chromosome 4, complete
             sequence
          Length = 28163

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     tgatgctgatgtttaacaca 22
             ||||||||||||||||||||
Sbjct: 12959 tgatgctgatgtttaacaca 12978
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 81      ttttacttcgaaatgaaata 100
               ||||||||||||||||||||
Sbjct: 1723433 ttttacttcgaaatgaaata 1723414
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>emb|CR858826.1| Pongo pygmaeus mRNA; cDNA DKFZp469G054 (from clone DKFZp469G054)
          Length = 2263

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 207  tcttccttctgctgaatgaa 226
            ||||||||||||||||||||
Sbjct: 2006 tcttccttctgctgaatgaa 1987
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>gb|AC113280.12| Mus musculus chromosome 1, clone RP23-391E12, complete sequence
          Length = 217982

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 389    tttctcttcatatcttctca 408
              ||||||||||||||||||||
Sbjct: 167267 tttctcttcatatcttctca 167286
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>gb|AC097065.2| Homo sapiens chromosome 1 clone RP11-532L16, complete sequence
          Length = 176861

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 413   ctctgtcttcttcacagatc 432
             ||||||||||||||||||||
Sbjct: 56013 ctctgtcttcttcacagatc 55994
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>gb|AC008900.5| Homo sapiens chromosome 5 clone CTD-2242C17, complete sequence
          Length = 166253

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 380 atccaccaatttctcttcat 399
           ||||||||||||||||||||
Sbjct: 940 atccaccaatttctcttcat 921
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>gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold
          Length = 2136267

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 333     agttgtctcaaagataacca 352
               ||||||||||||||||||||
Sbjct: 1243945 agttgtctcaaagataacca 1243964
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>gb|AC026230.5|AC026230 Homo sapiens chromosome 5 clone CTD-2288O8, complete sequence
          Length = 114802

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 380   atccaccaatttctcttcat 399
             ||||||||||||||||||||
Sbjct: 51539 atccaccaatttctcttcat 51558
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>gb|AC111099.15| Mus musculus chromosome 1, clone RP23-177A20, complete sequence
          Length = 195979

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 389    tttctcttcatatcttctca 408
              ||||||||||||||||||||
Sbjct: 161391 tttctcttcatatcttctca 161372
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 403     ttctcaagtactctgtcttc 422
               ||||||||||||||||||||
Sbjct: 5280083 ttctcaagtactctgtcttc 5280064
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>dbj|AK222285.1| Ciona intestinalis cDNA, clone:cicl041p23, full insert sequence
          Length = 1663

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 309 gcgaaccacatggcacatgt 328
           ||||||||||||||||||||
Sbjct: 284 gcgaaccacatggcacatgt 303
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>dbj|AB210748.1| Ciona intestinalis mRNA for Wnt signaling ligand, complete cds,
           clone: ciem839e07
          Length = 1662

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 309 gcgaaccacatggcacatgt 328
           ||||||||||||||||||||
Sbjct: 285 gcgaaccacatggcacatgt 304
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>gb|AC093901.2| Homo sapiens BAC clone RP11-730J4 from 2, complete sequence
          Length = 161153

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 485    tctttcaatgactgtatatacatc 508
              |||||||||| |||||||||||||
Sbjct: 141089 tctttcaatgcctgtatatacatc 141066
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>gb|AC008910.5|AC008910 Homo sapiens chromosome 5 clone CTD-2267A1, complete sequence
          Length = 78303

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 380  atccaccaatttctcttcat 399
            ||||||||||||||||||||
Sbjct: 7461 atccaccaatttctcttcat 7480
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>emb|BX072583.7| Zebrafish DNA sequence from clone CH211-185M2 in linkage group 13,
              complete sequence
          Length = 154297

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 153    tgttggggtatcaatgtcaa 172
              ||||||||||||||||||||
Sbjct: 111020 tgttggggtatcaatgtcaa 111039
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>dbj|AK103126.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119N09, full
           insert sequence
          Length = 1195

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 403 ttctcaagtactctgtcttc 422
           ||||||||||||||||||||
Sbjct: 893 ttctcaagtactctgtcttc 874
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>emb|CT573036.11| Mouse DNA sequence from clone RP24-376I11 on chromosome 9, complete
              sequence
          Length = 136639

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 401    tcttctcaagtactctgtct 420
              ||||||||||||||||||||
Sbjct: 134729 tcttctcaagtactctgtct 134710
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>dbj|AK058440.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-F11, full
           insert sequence
          Length = 750

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 403 ttctcaagtactctgtcttc 422
           ||||||||||||||||||||
Sbjct: 460 ttctcaagtactctgtcttc 441
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>gb|AE003636.4| Drosophila melanogaster chromosome 2L, section 45 of 83 of the complete
             sequence
          Length = 246231

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 666   ttgtccataccgcctgatat 685
             ||||||||||||||||||||
Sbjct: 48629 ttgtccataccgcctgatat 48610
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>emb|Z27078.4|CEK04H4 Caenorhabditis elegans Cosmid K04H4, complete sequence
          Length = 33929

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   ttttgtacagctcaattgtg 128
             ||||||||||||||||||||
Sbjct: 33720 ttttgtacagctcaattgtg 33701
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>gb|AC144761.4| Mus musculus BAC clone RP24-303C2 from 1, complete sequence
          Length = 176981

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 124    ttgtgagttgttaatttact 143
              ||||||||||||||||||||
Sbjct: 124396 ttgtgagttgttaatttact 124377
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>gb|AC122318.4| Mus musculus BAC clone RP23-306H2 from 16, complete sequence
          Length = 207909

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 388   atttctcttcatatcttctcaagt 411
             |||||||||||| |||||||||||
Sbjct: 40008 atttctcttcatttcttctcaagt 40031
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>gb|AC093954.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1097_A12,
             complete sequence
          Length = 88725

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 403   ttctcaagtactctgtcttc 422
             ||||||||||||||||||||
Sbjct: 16784 ttctcaagtactctgtcttc 16765
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>dbj|AB026564.1| Oryza sativa (japonica cultivar-group) OsPBB1 mRNA for beta 2
           subunit of 20S proteasome, complete cds
          Length = 1122

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 403 ttctcaagtactctgtcttc 422
           ||||||||||||||||||||
Sbjct: 786 ttctcaagtactctgtcttc 767


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,526,771
Number of Sequences: 3902068
Number of extensions: 6526771
Number of successful extensions: 116728
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 116516
Number of HSP's gapped (non-prelim): 212
length of query: 692
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 669
effective length of database: 17,143,297,704
effective search space: 11468866163976
effective search space used: 11468866163976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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