>emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042L16,
             complete sequence
          Length = 163738

 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 101/114 (88%), Gaps = 7/114 (6%)
 Strand = Plus / Plus

                                                                         
Query: 83    aaaagcaaatggaagaattaacctagctacaaaatcataactagcctcatccccccacac 142
             |||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 54525 aaaagcaaatggaagaat-aacctagctacaaaatcataactagccgcat-cccccacac 54582

                                                                   
Query: 143   tg-agtcactctatcaa--ctttgaacat--aaacctaaccagataaagttaca 191
             || ||||||| | ||||   |||||||||  |||||||| ||||| ||||||||
Sbjct: 54583 tgaagtcactatgtcaaacttttgaacataaaaacctaaacagattaagttaca 54636



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                        
Query: 37    aagatgctacaatgcacagttggaatg 63
             |||||||||||||||||||||||||||
Sbjct: 54482 aagatgctacaatgcacagttggaatg 54508

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 101/114 (88%), Gaps = 7/114 (6%)
 Strand = Plus / Plus

                                                                            
Query: 83       aaaagcaaatggaagaattaacctagctacaaaatcataactagcctcatccccccacac 142
                |||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 21241051 aaaagcaaatggaagaat-aacctagctacaaaatcataactagccgcat-cccccacac 21241108

                                                                      
Query: 143      tg-agtcactctatcaa--ctttgaacat--aaacctaaccagataaagttaca 191
                || ||||||| | ||||   |||||||||  |||||||| ||||| ||||||||
Sbjct: 21241109 tgaagtcactatgtcaaacttttgaacataaaaacctaaacagattaagttaca 21241162



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                           
Query: 37       aagatgctacaatgcacagttggaatg 63
                |||||||||||||||||||||||||||
Sbjct: 21241008 aagatgctacaatgcacagttggaatg 21241034

>gb|AC153009.4| Mus musculus BAC clone RP23-408I18 from chromosome 9, complete sequence
          Length = 194871

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 78    tatataaaagcaaatggaagaa 99
             ||||||||||||||||||||||
Sbjct: 57667 tatataaaagcaaatggaagaa 57688

>gb|AC026100.19| Homo sapiens 3 BAC RP11-449F7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 209521

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 108   gctacaaaatcataactagcct 129
             ||||||||||||||||||||||
Sbjct: 74136 gctacaaaatcataactagcct 74157

>dbj|AP002840.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-159N11, complete
             sequence
          Length = 177031

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 133   ccccccacactgagtcactcta 154
             ||||||||||||||||||||||
Sbjct: 71627 ccccccacactgagtcactcta 71606

>gb|AC133216.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0049B20, complete sequence
          Length = 131337

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 80    tataaaagcaaatggaagaat 100
             |||||||||||||||||||||
Sbjct: 52734 tataaaagcaaatggaagaat 52714

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 80       tataaaagcaaatggaagaat 100
                |||||||||||||||||||||
Sbjct: 26999446 tataaaagcaaatggaagaat 26999426

>gb|AC115725.9| Mus musculus chromosome 5, clone RP23-21A18, complete sequence
          Length = 278172

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 83     aaaagcaaatggaagaattaa 103
              |||||||||||||||||||||
Sbjct: 173144 aaaagcaaatggaagaattaa 173124

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 80       tataaaagcaaatggaagaat 100
                |||||||||||||||||||||
Sbjct: 27326499 tataaaagcaaatggaagaat 27326479

>ref|XM_644245.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (316.t00007)
            partial mRNA
          Length = 1323

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 84   aaagcaaatggaagaattaa 103
            ||||||||||||||||||||
Sbjct: 1149 aaagcaaatggaagaattaa 1168

>gb|AF063866.1|AF063866 Melanoplus sanguinipes entomopoxvirus, complete genome
          Length = 236120

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 80    tataaaagcaaatggaagaattaa 103
             ||||||||||||||||| ||||||
Sbjct: 96662 tataaaagcaaatggaaaaattaa 96685

>gb|AC150892.2| Mus musculus BAC clone RP24-383C4 from 5, complete sequence
          Length = 168742

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 25     ataaacacattcaagatgct 44
              ||||||||||||||||||||
Sbjct: 107851 ataaacacattcaagatgct 107832


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,329,442
Number of Sequences: 3902068
Number of extensions: 2329442
Number of successful extensions: 42038
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 41993
Number of HSP's gapped (non-prelim): 43
length of query: 233
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 211
effective length of database: 17,147,199,772
effective search space: 3618059151892
effective search space used: 3618059151892
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)