ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal32f06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YNI7_YEAST (P48231) Hypothetical 132.5 kDa protein in TOP2-MKT1 ... 30 5.8

>YNI7_YEAST (P48231) Hypothetical 132.5 kDa protein in TOP2-MKT1 intergenic|
            region
          Length = 1178

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = -2

Query: 136  WKVTVYDVERSHDVDDVKDLRCQMSAATVVLVYVCY 29
            W VT + V ++ D +  ++  C+++  T+ LV  CY
Sbjct: 908  WSVTTFRVTKTKDANKAENFICEVNIPTIELVRNCY 943


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,485,738
Number of Sequences: 219361
Number of extensions: 2108772
Number of successful extensions: 5346
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 5202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5345
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7479594804
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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