ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal32f05 |
|---|---|
| Clone Library Name | barley_pub |
>CACP_YEAST (P32796) Carnitine O-acetyltransferase, mitochondrial precursor (EC| 2.3.1.7) (Carnitine acetylase) Length = 670 Score = 32.3 bits (72), Expect = 1.5 Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 10/70 (14%) Frame = -1 Query: 565 KWRRADVPKADSV----------IDYFKNITDANGVIIHPSGVELLIHSSIDELASCYGD 416 KW+ DVP A+ + Y KN + NGV H G++ ++ S+ D++ + D Sbjct: 523 KWQNGDVPIAEKIQALKHSAKEHSTYLKNAANGNGVDRHFFGLKNMLKSNDDQIPPLFKD 582 Query: 415 KQGKKYRSWV 386 +W+ Sbjct: 583 PLFNYSSTWL 592
>UUP_ECOLI (P43672) ABC transporter ATP-binding protein uup| Length = 635 Score = 32.0 bits (71), Expect = 2.0 Identities = 17/34 (50%), Positives = 20/34 (58%) Frame = +2 Query: 122 DFLFHPQEEKTPPHAPAGGLEFGRLLNPGIFFAP 223 DFLFHP+ TP A +GG E RLL +F P Sbjct: 426 DFLFHPKRAMTPVRALSGG-ERNRLLLARLFLKP 458
>RD23C_ARATH (Q84L31) Putative DNA repair protein RAD23-3 (RAD23-like protein 3)| (AtRAD23-3) Length = 419 Score = 31.6 bits (70), Expect = 2.6 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = -1 Query: 550 DVPKADSVIDYFKNITDANGVIIHPSGVELLIH 452 +V DSV+D KNI G ++P+ ++LIH Sbjct: 16 EVKPEDSVVDVKKNIESVQGADVYPAAKQMLIH 48
>PLMN_MACEU (O18783) Plasminogen precursor (EC 3.4.21.7) [Contains: Plasmin| heavy chain A; Activation peptide; Plasmin heavy chain A, short form; Plasmin light chain B] Length = 806 Score = 30.8 bits (68), Expect = 4.5 Identities = 21/71 (29%), Positives = 29/71 (40%) Frame = +2 Query: 95 KKKFTCFRYDFLFHPQEEKTPPHAPAGGLEFGRLLNPGIFFAPCLVDVCYHETPGVFRLY 274 K TC R++ + +TP + P GL+ NP P CY P V + Y Sbjct: 291 KSGHTCQRWNKQTPHKHNRTPENFPCRGLDENYCRNPDGELEPW----CYTTNPDVRQEY 346 Query: 275 TQRKSCKTAHP 307 SC T+ P Sbjct: 347 CAIPSCGTSSP 357
>GLMM_DESPS (Q6AMQ5) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 450 Score = 30.4 bits (67), Expect = 5.8 Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 7/85 (8%) Frame = -1 Query: 661 LMLLQEMMCFLTSRRTLSSLQRAIVKFYVLYEKWRRAD-------VPKADSVIDYFKNIT 503 L LQ + ++TLS L + + F + + R A V AD+V Y + Sbjct: 346 LAALQILAIMKKRKKTLSELAQVMQSFPQVLKNVRTAKKISVDSIVGFADAVKKYEMQLG 405 Query: 502 DANGVIIHPSGVELLIHSSIDELAS 428 D +++ PSG E +I ++ L S Sbjct: 406 DTGRILVRPSGTEPVIRVMVEGLDS 430
>ENV2_MOUSE (P11370) Retrovirus-related Env polyprotein from Fv-4 locus| Length = 679 Score = 30.4 bits (67), Expect = 5.8 Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 3/57 (5%) Frame = +3 Query: 231 WMCVTTKPPGFSGFTLSARVVKQH---THASPSASHKSNLTSQLSEAVCKITSLSTH 392 W+C+ ++PP + G + K T+ S A HK L+ + C TH Sbjct: 346 WLCLVSEPPYYEGVAVLGDYTKHETAPTNCSSRAQHKLTLSEVTGQGKCLGAVPKTH 402
>PSPB_HUMAN (P07988) Pulmonary surfactant-associated protein B precursor (SP-B)| (6 kDa protein) (Pulmonary surfactant-associated proteolipid SPL(Phe)) (18 kDa pulmonary-surfactant protein) Length = 381 Score = 30.0 bits (66), Expect = 7.6 Identities = 11/17 (64%), Positives = 15/17 (88%) Frame = -1 Query: 529 VIDYFKNITDANGVIIH 479 VIDYF+N TD+NG+ +H Sbjct: 123 VIDYFQNQTDSNGICMH 139
>MATMC_SCHPO (P10840) Mating-type M-specific polypeptide Mc (mat-Mc)| Length = 181 Score = 30.0 bits (66), Expect = 7.6 Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 7/100 (7%) Frame = +3 Query: 126 SYFIXXXXXXXPMRRPAV*SLDDCSTPGYSLRHVLWMCVTT----KPPGFSGFTLSARVV 293 SY + P +P +LD C PGY L+ + +T +PP + F L Sbjct: 60 SYLLDGNSAQLPRPQPISFTLDQCKVPGYILKSLRKDTTSTERTPRPP--NAFIL----Y 113 Query: 294 KQHTHASPSASHKSNLTSQLSEAVCKI---TSLSTHDRYF 404 ++ HA+ S+ S SQ+S+ V ++ S RYF Sbjct: 114 RKEKHATLLKSNPSINNSQVSKLVGEMWRNESKEVRMRYF 153
>ENV_FLVC6 (P21443) Env polyprotein precursor [Contains: Coat protein GP70;| Spike protein p15E] Length = 668 Score = 30.0 bits (66), Expect = 7.6 Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Frame = +3 Query: 231 WMCVTTKPPGFSGFTLSARVVKQHTHASPSA----SHKSNLTSQLSEAVCKITSLSTH 392 W+C+ ++PP + G + Q T+ PS HK ++ + +C T TH Sbjct: 333 WLCLVSRPPYYEGIAVLGNYSNQ-TNPPPSCLSVPQHKLTISEVSGQGLCIATVPKTH 389
>VGLM_NYV (Q83887) Envelope polyprotein precursor [Contains: Glycoprotein 1| (G1); Glycoprotein 2 (G2)] Length = 1140 Score = 29.6 bits (65), Expect = 10.0 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = +2 Query: 233 DVCYHETPGVFRLYTQRKSCKTAHPRITFCLPQVESHEPTVRS 361 DVC+HE L T +KSC + +C+ ES E +++ Sbjct: 550 DVCHHECETAKELETHKKSCPEG--QCPYCMTMTESTESALQA 590
>ENV_MLVCB (P08360) Env polyprotein precursor (Coat polyprotein) [Contains:| Coat protein GP70; Spike protein p15E; R protein] Length = 661 Score = 29.6 bits (65), Expect = 10.0 Identities = 14/57 (24%), Positives = 24/57 (42%), Gaps = 3/57 (5%) Frame = +3 Query: 231 WMCVTTKPPGFSGFTLSARVVKQHT---HASPSASHKSNLTSQLSEAVCKITSLSTH 392 W+C+ ++PP + G + T + S + HK L+ + C T TH Sbjct: 333 WLCLVSEPPYYEGVAVLREYTSHETAPANCSSGSQHKLTLSEVTGQGRCLGTVPKTH 389
>ENV_RMCFV (P06445) Env polyprotein precursor (Coat polyprotein) [Contains:| Coat protein GP70; Coat protein p12E; Spike protein p15E] Length = 640 Score = 29.6 bits (65), Expect = 10.0 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Frame = +3 Query: 231 WMCVTTKPPGFSGFTLSARVVKQHTHA----SPSASHKSNLTSQLSEAVCKITSLSTH 392 W+C+ +PP + G + HT A S ++ HK L+ + +C T TH Sbjct: 311 WLCLVAEPPYYEGVAVLG-TYSNHTSAPTNCSVASQHKLTLSEVTGQGLCIGTVPKTH 367
>APOA_HUMAN (P08519) Apolipoprotein(a) precursor (EC 3.4.21.-) (Apo(a)) (Lp(a))| Length = 4548 Score = 29.6 bits (65), Expect = 10.0 Identities = 19/65 (29%), Positives = 23/65 (35%) Frame = +2 Query: 107 TCFRYDFLFHPQEEKTPPHAPAGGLEFGRLLNPGIFFAPCLVDVCYHETPGVFRLYTQRK 286 TC + + +TP + P GL NP AP CY PGV Y Sbjct: 3240 TCQAWSSMTPHSHSRTPEYYPNAGLIMNYCRNPDAVAAP----YCYTRDPGVRWEYCNLT 3295 Query: 287 SCKTA 301 C A Sbjct: 3296 QCSDA 3300 Score = 29.6 bits (65), Expect = 10.0 Identities = 19/65 (29%), Positives = 23/65 (35%) Frame = +2 Query: 107 TCFRYDFLFHPQEEKTPPHAPAGGLEFGRLLNPGIFFAPCLVDVCYHETPGVFRLYTQRK 286 TC + + +TP + P GL NP AP CY PGV Y Sbjct: 3126 TCQAWSSMTPHSHSRTPEYYPNAGLIMNYCRNPDAVAAP----YCYTRDPGVRWEYCNLT 3181 Query: 287 SCKTA 301 C A Sbjct: 3182 QCSDA 3186 Score = 29.6 bits (65), Expect = 10.0 Identities = 19/65 (29%), Positives = 23/65 (35%) Frame = +2 Query: 107 TCFRYDFLFHPQEEKTPPHAPAGGLEFGRLLNPGIFFAPCLVDVCYHETPGVFRLYTQRK 286 TC + + +TP + P GL NP AP CY PGV Y Sbjct: 3012 TCQAWSSMTPHSHSRTPEYYPNAGLIMNYCRNPDAVAAP----YCYTRDPGVRWEYCNLT 3067 Query: 287 SCKTA 301 C A Sbjct: 3068 QCSDA 3072 Score = 29.6 bits (65), Expect = 10.0 Identities = 19/65 (29%), Positives = 23/65 (35%) Frame = +2 Query: 107 TCFRYDFLFHPQEEKTPPHAPAGGLEFGRLLNPGIFFAPCLVDVCYHETPGVFRLYTQRK 286 TC + + +TP + P GL NP AP CY PGV Y Sbjct: 2898 TCQAWSSMTPHSHSRTPEYYPNAGLIMNYCRNPDAVAAP----YCYTRDPGVRWEYCNLT 2953 Query: 287 SCKTA 301 C A Sbjct: 2954 QCSDA 2958 Score = 29.6 bits (65), Expect = 10.0 Identities = 19/65 (29%), Positives = 23/65 (35%) Frame = +2 Query: 107 TCFRYDFLFHPQEEKTPPHAPAGGLEFGRLLNPGIFFAPCLVDVCYHETPGVFRLYTQRK 286 TC + + +TP + P GL NP AP CY PGV Y Sbjct: 2784 TCQAWSSMTPHSHSRTPEYYPNAGLIMNYCRNPDAVAAP----YCYTRDPGVRWEYCNLT 2839 Query: 287 SCKTA 301 C A Sbjct: 2840 QCSDA 2844 Score = 29.6 bits (65), Expect = 10.0 Identities = 19/65 (29%), Positives = 23/65 (35%) Frame = +2 Query: 107 TCFRYDFLFHPQEEKTPPHAPAGGLEFGRLLNPGIFFAPCLVDVCYHETPGVFRLYTQRK 286 TC + + +TP + P GL NP AP CY PGV Y Sbjct: 2670 TCQAWSSMTPHSHSRTPEYYPNAGLIMNYCRNPDAVAAP----YCYTRDPGVRWEYCNLT 2725 Query: 287 SCKTA 301 C A Sbjct: 2726 QCSDA 2730 Score = 29.6 bits (65), Expect = 10.0 Identities = 19/65 (29%), Positives = 23/65 (35%) Frame = +2 Query: 107 TCFRYDFLFHPQEEKTPPHAPAGGLEFGRLLNPGIFFAPCLVDVCYHETPGVFRLYTQRK 286 TC + + +TP + P GL NP AP CY PGV Y Sbjct: 2556 TCQAWSSMTPHSHSRTPEYYPNAGLIMNYCRNPDAVAAP----YCYTRDPGVRWEYCNLT 2611 Query: 287 SCKTA 301 C A Sbjct: 2612 QCSDA 2616 Score = 29.6 bits (65), Expect = 10.0 Identities = 19/65 (29%), Positives = 23/65 (35%) Frame = +2 Query: 107 TCFRYDFLFHPQEEKTPPHAPAGGLEFGRLLNPGIFFAPCLVDVCYHETPGVFRLYTQRK 286 TC + + +TP + P GL NP AP CY PGV Y Sbjct: 2442 TCQAWSSMTPHSHSRTPEYYPNAGLIMNYCRNPDAVAAP----YCYTRDPGVRWEYCNLT 2497 Query: 287 SCKTA 301 C A Sbjct: 2498 QCSDA 2502 Score = 29.6 bits (65), Expect = 10.0 Identities = 19/65 (29%), Positives = 23/65 (35%) Frame = +2 Query: 107 TCFRYDFLFHPQEEKTPPHAPAGGLEFGRLLNPGIFFAPCLVDVCYHETPGVFRLYTQRK 286 TC + + +TP + P GL NP AP CY PGV Y Sbjct: 2328 TCQAWSSMTPHSHSRTPEYYPNAGLIMNYCRNPDAVAAP----YCYTRDPGVRWEYCNLT 2383 Query: 287 SCKTA 301 C A Sbjct: 2384 QCSDA 2388 Score = 29.6 bits (65), Expect = 10.0 Identities = 19/65 (29%), Positives = 23/65 (35%) Frame = +2 Query: 107 TCFRYDFLFHPQEEKTPPHAPAGGLEFGRLLNPGIFFAPCLVDVCYHETPGVFRLYTQRK 286 TC + + +TP + P GL NP AP CY PGV Y Sbjct: 2214 TCQAWSSMTPHSHSRTPEYYPNAGLIMNYCRNPDAVAAP----YCYTRDPGVRWEYCNLT 2269 Query: 287 SCKTA 301 C A Sbjct: 2270 QCSDA 2274 Score = 29.6 bits (65), Expect = 10.0 Identities = 19/65 (29%), Positives = 23/65 (35%) Frame = +2 Query: 107 TCFRYDFLFHPQEEKTPPHAPAGGLEFGRLLNPGIFFAPCLVDVCYHETPGVFRLYTQRK 286 TC + + +TP + P GL NP AP CY PGV Y Sbjct: 2100 TCQAWSSMTPHSHSRTPEYYPNAGLIMNYCRNPDAVAAP----YCYTRDPGVRWEYCNLT 2155 Query: 287 SCKTA 301 C A Sbjct: 2156 QCSDA 2160 Score = 29.6 bits (65), Expect = 10.0 Identities = 19/65 (29%), Positives = 23/65 (35%) Frame = +2 Query: 107 TCFRYDFLFHPQEEKTPPHAPAGGLEFGRLLNPGIFFAPCLVDVCYHETPGVFRLYTQRK 286 TC + + +TP + P GL NP AP CY PGV Y Sbjct: 1986 TCQAWSSMTPHSHSRTPEYYPNAGLIMNYCRNPDAVAAP----YCYTRDPGVRWEYCNLT 2041 Query: 287 SCKTA 301 C A Sbjct: 2042 QCSDA 2046 Score = 29.6 bits (65), Expect = 10.0 Identities = 19/65 (29%), Positives = 23/65 (35%) Frame = +2 Query: 107 TCFRYDFLFHPQEEKTPPHAPAGGLEFGRLLNPGIFFAPCLVDVCYHETPGVFRLYTQRK 286 TC + + +TP + P GL NP AP CY PGV Y Sbjct: 1872 TCQAWSSMTPHSHSRTPEYYPNAGLIMNYCRNPDAVAAP----YCYTRDPGVRWEYCNLT 1927 Query: 287 SCKTA 301 C A Sbjct: 1928 QCSDA 1932 Score = 29.6 bits (65), Expect = 10.0 Identities = 19/65 (29%), Positives = 23/65 (35%) Frame = +2 Query: 107 TCFRYDFLFHPQEEKTPPHAPAGGLEFGRLLNPGIFFAPCLVDVCYHETPGVFRLYTQRK 286 TC + + +TP + P GL NP AP CY PGV Y Sbjct: 1758 TCQAWSSMTPHSHSRTPEYYPNAGLIMNYCRNPDAVAAP----YCYTRDPGVRWEYCNLT 1813 Query: 287 SCKTA 301 C A Sbjct: 1814 QCSDA 1818 Score = 29.6 bits (65), Expect = 10.0 Identities = 19/65 (29%), Positives = 23/65 (35%) Frame = +2 Query: 107 TCFRYDFLFHPQEEKTPPHAPAGGLEFGRLLNPGIFFAPCLVDVCYHETPGVFRLYTQRK 286 TC + + +TP + P GL NP AP CY PGV Y Sbjct: 1644 TCQAWSSMTPHSHSRTPEYYPNAGLIMNYCRNPDAVAAP----YCYTRDPGVRWEYCNLT 1699 Query: 287 SCKTA 301 C A Sbjct: 1700 QCSDA 1704 Score = 29.6 bits (65), Expect = 10.0 Identities = 19/65 (29%), Positives = 23/65 (35%) Frame = +2 Query: 107 TCFRYDFLFHPQEEKTPPHAPAGGLEFGRLLNPGIFFAPCLVDVCYHETPGVFRLYTQRK 286 TC + + +TP + P GL NP AP CY PGV Y Sbjct: 1530 TCQAWSSMTPHSHSRTPEYYPNAGLIMNYCRNPDAVAAP----YCYTRDPGVRWEYCNLT 1585 Query: 287 SCKTA 301 C A Sbjct: 1586 QCSDA 1590 Score = 29.6 bits (65), Expect = 10.0 Identities = 19/65 (29%), Positives = 23/65 (35%) Frame = +2 Query: 107 TCFRYDFLFHPQEEKTPPHAPAGGLEFGRLLNPGIFFAPCLVDVCYHETPGVFRLYTQRK 286 TC + + +TP + P GL NP AP CY PGV Y Sbjct: 1416 TCQAWSSMTPHSHSRTPEYYPNAGLIMNYCRNPDAVAAP----YCYTRDPGVRWEYCNLT 1471 Query: 287 SCKTA 301 C A Sbjct: 1472 QCSDA 1476 Score = 29.6 bits (65), Expect = 10.0 Identities = 19/65 (29%), Positives = 23/65 (35%) Frame = +2 Query: 107 TCFRYDFLFHPQEEKTPPHAPAGGLEFGRLLNPGIFFAPCLVDVCYHETPGVFRLYTQRK 286 TC + + +TP + P GL NP AP CY PGV Y Sbjct: 1302 TCQAWSSMTPHSHSRTPEYYPNAGLIMNYCRNPDAVAAP----YCYTRDPGVRWEYCNLT 1357 Query: 287 SCKTA 301 C A Sbjct: 1358 QCSDA 1362 Score = 29.6 bits (65), Expect = 10.0 Identities = 19/65 (29%), Positives = 23/65 (35%) Frame = +2 Query: 107 TCFRYDFLFHPQEEKTPPHAPAGGLEFGRLLNPGIFFAPCLVDVCYHETPGVFRLYTQRK 286 TC + + +TP + P GL NP AP CY PGV Y Sbjct: 1188 TCQAWSSMTPHSHSRTPEYYPNAGLIMNYCRNPDAVAAP----YCYTRDPGVRWEYCNLT 1243 Query: 287 SCKTA 301 C A Sbjct: 1244 QCSDA 1248 Score = 29.6 bits (65), Expect = 10.0 Identities = 19/65 (29%), Positives = 23/65 (35%) Frame = +2 Query: 107 TCFRYDFLFHPQEEKTPPHAPAGGLEFGRLLNPGIFFAPCLVDVCYHETPGVFRLYTQRK 286 TC + + +TP + P GL NP AP CY PGV Y Sbjct: 1074 TCQAWSSMTPHSHSRTPEYYPNAGLIMNYCRNPDAVAAP----YCYTRDPGVRWEYCNLT 1129 Query: 287 SCKTA 301 C A Sbjct: 1130 QCSDA 1134 Score = 29.6 bits (65), Expect = 10.0 Identities = 19/65 (29%), Positives = 23/65 (35%) Frame = +2 Query: 107 TCFRYDFLFHPQEEKTPPHAPAGGLEFGRLLNPGIFFAPCLVDVCYHETPGVFRLYTQRK 286 TC + + +TP + P GL NP AP CY PGV Y Sbjct: 960 TCQAWSSMTPHSHSRTPEYYPNAGLIMNYCRNPDAVAAP----YCYTRDPGVRWEYCNLT 1015 Query: 287 SCKTA 301 C A Sbjct: 1016 QCSDA 1020 Score = 29.6 bits (65), Expect = 10.0 Identities = 19/65 (29%), Positives = 23/65 (35%) Frame = +2 Query: 107 TCFRYDFLFHPQEEKTPPHAPAGGLEFGRLLNPGIFFAPCLVDVCYHETPGVFRLYTQRK 286 TC + + +TP + P GL NP AP CY PGV Y Sbjct: 846 TCQAWSSMTPHSHSRTPEYYPNAGLIMNYCRNPDAVAAP----YCYTRDPGVRWEYCNLT 901 Query: 287 SCKTA 301 C A Sbjct: 902 QCSDA 906 Score = 29.6 bits (65), Expect = 10.0 Identities = 19/65 (29%), Positives = 23/65 (35%) Frame = +2 Query: 107 TCFRYDFLFHPQEEKTPPHAPAGGLEFGRLLNPGIFFAPCLVDVCYHETPGVFRLYTQRK 286 TC + + +TP + P GL NP AP CY PGV Y Sbjct: 732 TCQAWSSMTPHSHSRTPEYYPNAGLIMNYCRNPDAVAAP----YCYTRDPGVRWEYCNLT 787 Query: 287 SCKTA 301 C A Sbjct: 788 QCSDA 792 Score = 29.6 bits (65), Expect = 10.0 Identities = 19/65 (29%), Positives = 23/65 (35%) Frame = +2 Query: 107 TCFRYDFLFHPQEEKTPPHAPAGGLEFGRLLNPGIFFAPCLVDVCYHETPGVFRLYTQRK 286 TC + + +TP + P GL NP AP CY PGV Y Sbjct: 618 TCQAWSSMTPHSHSRTPEYYPNAGLIMNYCRNPDAVAAP----YCYTRDPGVRWEYCNLT 673 Query: 287 SCKTA 301 C A Sbjct: 674 QCSDA 678 Score = 29.6 bits (65), Expect = 10.0 Identities = 19/65 (29%), Positives = 23/65 (35%) Frame = +2 Query: 107 TCFRYDFLFHPQEEKTPPHAPAGGLEFGRLLNPGIFFAPCLVDVCYHETPGVFRLYTQRK 286 TC + + +TP + P GL NP AP CY PGV Y Sbjct: 504 TCQAWSSMTPHSHSRTPEYYPNAGLIMNYCRNPDAVAAP----YCYTRDPGVRWEYCNLT 559 Query: 287 SCKTA 301 C A Sbjct: 560 QCSDA 564 Score = 29.6 bits (65), Expect = 10.0 Identities = 19/65 (29%), Positives = 23/65 (35%) Frame = +2 Query: 107 TCFRYDFLFHPQEEKTPPHAPAGGLEFGRLLNPGIFFAPCLVDVCYHETPGVFRLYTQRK 286 TC + + +TP + P GL NP AP CY PGV Y Sbjct: 390 TCQAWSSMTPHSHSRTPEYYPNAGLIMNYCRNPDAVAAP----YCYTRDPGVRWEYCNLT 445 Query: 287 SCKTA 301 C A Sbjct: 446 QCSDA 450 Score = 29.6 bits (65), Expect = 10.0 Identities = 19/65 (29%), Positives = 23/65 (35%) Frame = +2 Query: 107 TCFRYDFLFHPQEEKTPPHAPAGGLEFGRLLNPGIFFAPCLVDVCYHETPGVFRLYTQRK 286 TC + + +TP + P GL NP AP CY PGV Y Sbjct: 276 TCQAWSSMTPHSHSRTPEYYPNAGLIMNYCRNPDAVAAP----YCYTRDPGVRWEYCNLT 331 Query: 287 SCKTA 301 C A Sbjct: 332 QCSDA 336 Score = 29.6 bits (65), Expect = 10.0 Identities = 19/65 (29%), Positives = 23/65 (35%) Frame = +2 Query: 107 TCFRYDFLFHPQEEKTPPHAPAGGLEFGRLLNPGIFFAPCLVDVCYHETPGVFRLYTQRK 286 TC + + +TP + P GL NP AP CY PGV Y Sbjct: 162 TCQAWSSMTPHSHSRTPEYYPNAGLIMNYCRNPDAVAAP----YCYTRDPGVRWEYCNLT 217 Query: 287 SCKTA 301 C A Sbjct: 218 QCSDA 222 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 109,349,873 Number of Sequences: 219361 Number of extensions: 2372279 Number of successful extensions: 5983 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 5657 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5971 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7536258401 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
