ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal8d03 |
|---|---|
| Clone Library Name | barley_pub |
>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,| chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 Score = 167 bits (424), Expect(4) = 1e-67 Identities = 82/83 (98%), Positives = 83/83 (100%) Frame = -1 Query: 505 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 326 +EVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD Sbjct: 345 DEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 404 Query: 325 TYMSQAALGDANQDAMKTGSFYG 257 TYMSQAALGDANQDAMKTGSFYG Sbjct: 405 TYMSQAALGDANQDAMKTGSFYG 427 Score = 86.3 bits (212), Expect(4) = 1e-67 Identities = 38/38 (100%), Positives = 38/38 (100%) Frame = -3 Query: 209 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 96 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF Sbjct: 427 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464 Score = 33.1 bits (74), Expect(4) = 1e-67 Identities = 15/15 (100%), Positives = 15/15 (100%) Frame = -2 Query: 600 NVSDESVVKIVDTFP 556 NVSDESVVKIVDTFP Sbjct: 314 NVSDESVVKIVDTFP 328 Score = 31.2 bits (69), Expect(4) = 1e-67 Identities = 13/14 (92%), Positives = 14/14 (100%) Frame = -3 Query: 545 IDFFGALRARVYDE 504 IDFFGALRARVYD+ Sbjct: 332 IDFFGALRARVYDD 345
>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) (RubisCO activase alpha form) Length = 476 Score = 130 bits (327), Expect(4) = 2e-48 Identities = 60/83 (72%), Positives = 73/83 (87%) Frame = -1 Query: 505 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 326 +EVRKWV G++ IGK+LVNS++GP +FEQPKMT++KLL YG MLVQEQ+NVKRVQLAD Sbjct: 355 DEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLAD 414 Query: 325 TYMSQAALGDANQDAMKTGSFYG 257 YMS+AALGDAN DA+K G+FYG Sbjct: 415 KYMSEAALGDANNDAIKRGTFYG 437 Score = 66.6 bits (161), Expect(4) = 2e-48 Identities = 30/40 (75%), Positives = 33/40 (82%), Gaps = 1/40 (2%) Frame = -3 Query: 212 GGKGAQQ-GTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 96 GG+ AQQ G +PVPEGCTD A NYDPTARSDDGSC+Y F Sbjct: 437 GGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVYKF 476 Score = 28.5 bits (62), Expect(4) = 2e-48 Identities = 12/14 (85%), Positives = 13/14 (92%) Frame = -3 Query: 545 IDFFGALRARVYDE 504 IDFFGALRARVY + Sbjct: 342 IDFFGALRARVYHD 355 Score = 28.1 bits (61), Expect(4) = 2e-48 Identities = 10/15 (66%), Positives = 14/15 (93%) Frame = -2 Query: 600 NVSDESVVKIVDTFP 556 NV+D+ +VK+VDTFP Sbjct: 324 NVADDDIVKLVDTFP 338
>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 474 Score = 127 bits (318), Expect(4) = 1e-46 Identities = 61/83 (73%), Positives = 73/83 (87%) Frame = -1 Query: 505 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 326 +EVRK+V S G+E IGKRLVNSR+GP FEQP+MT EKL+EYG+MLV EQ+NVKRVQLA+ Sbjct: 355 DEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAE 414 Query: 325 TYMSQAALGDANQDAMKTGSFYG 257 TY+SQAALGDAN DA+ G+FYG Sbjct: 415 TYLSQAALGDANADAIGRGTFYG 437 Score = 67.8 bits (164), Expect(4) = 1e-46 Identities = 29/38 (76%), Positives = 33/38 (86%) Frame = -3 Query: 209 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 96 GKGAQQ LPVPEGCTD A+N+DPTARSDDG+C+Y F Sbjct: 437 GKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF 474 Score = 31.2 bits (69), Expect(4) = 1e-46 Identities = 13/14 (92%), Positives = 14/14 (100%) Frame = -3 Query: 545 IDFFGALRARVYDE 504 IDFFGALRARVYD+ Sbjct: 342 IDFFGALRARVYDD 355 Score = 21.6 bits (44), Expect(4) = 1e-46 Identities = 7/14 (50%), Positives = 10/14 (71%) Frame = -2 Query: 597 VSDESVVKIVDTFP 556 + DE +V +VD FP Sbjct: 325 IKDEDIVTLVDQFP 338
>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 472 Score = 131 bits (330), Expect(4) = 5e-46 Identities = 59/83 (71%), Positives = 75/83 (90%) Frame = -1 Query: 505 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 326 +EVRKWV S G++N+GK+LVNS+DGP FEQP+MT++KL+EYG+MLVQEQ+NVKRVQLAD Sbjct: 353 DEVRKWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLAD 412 Query: 325 TYMSQAALGDANQDAMKTGSFYG 257 YMS AALGDAN+DA+ G+F+G Sbjct: 413 QYMSSAALGDANKDAIDRGTFFG 435 Score = 63.9 bits (154), Expect(4) = 5e-46 Identities = 28/36 (77%), Positives = 30/36 (83%) Frame = -3 Query: 209 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLY 102 GK AQQ +LPV +GCTD AKNYDPTARSDDGSC Y Sbjct: 435 GKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 470 Score = 28.5 bits (62), Expect(4) = 5e-46 Identities = 12/14 (85%), Positives = 13/14 (92%) Frame = -3 Query: 545 IDFFGALRARVYDE 504 IDFFGALRARVY + Sbjct: 340 IDFFGALRARVYHD 353 Score = 21.2 bits (43), Expect(4) = 5e-46 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = -2 Query: 597 VSDESVVKIVDTFP 556 V E VVK+VD FP Sbjct: 323 VPAEHVVKLVDAFP 336
>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,| chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 Score = 143 bits (361), Expect(3) = 2e-39 Identities = 66/83 (79%), Positives = 76/83 (91%) Frame = -1 Query: 505 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 326 +EVRKWVG G+ENI KRLVNSR+GP TF+QPKMT+EKL+EYGHMLVQEQ+NVKRVQLAD Sbjct: 342 DEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLAD 401 Query: 325 TYMSQAALGDANQDAMKTGSFYG 257 Y+S+AALG AN DAMKTG+FYG Sbjct: 402 KYLSEAALGQANDDAMKTGAFYG 424 Score = 31.2 bits (69), Expect(3) = 2e-39 Identities = 13/14 (92%), Positives = 14/14 (100%) Frame = -3 Query: 545 IDFFGALRARVYDE 504 IDFFGALRARVYD+ Sbjct: 329 IDFFGALRARVYDD 342 Score = 28.1 bits (61), Expect(3) = 2e-39 Identities = 11/15 (73%), Positives = 14/15 (93%) Frame = -2 Query: 600 NVSDESVVKIVDTFP 556 NV DE+VV++VDTFP Sbjct: 311 NVPDEAVVRLVDTFP 325
>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 432 Score = 142 bits (359), Expect(3) = 4e-39 Identities = 66/83 (79%), Positives = 77/83 (92%) Frame = -1 Query: 505 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 326 +EVRKWV TG+ENIGKRLVNSR+GP FEQPKMT+EKL+EYG+MLV+EQ+NVKRVQLA+ Sbjct: 345 DEVRKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLIEYGYMLVKEQENVKRVQLAE 404 Query: 325 TYMSQAALGDANQDAMKTGSFYG 257 Y+S+AALGDAN DAMKTGSFYG Sbjct: 405 QYLSEAALGDANSDAMKTGSFYG 427 Score = 31.2 bits (69), Expect(3) = 4e-39 Identities = 13/14 (92%), Positives = 14/14 (100%) Frame = -3 Query: 545 IDFFGALRARVYDE 504 IDFFGALRARVYD+ Sbjct: 332 IDFFGALRARVYDD 345 Score = 27.7 bits (60), Expect(3) = 4e-39 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = -2 Query: 600 NVSDESVVKIVDTFP 556 NV DE +VKIVD+FP Sbjct: 314 NVPDEDIVKIVDSFP 328
>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 437 Score = 137 bits (344), Expect(3) = 5e-37 Identities = 62/83 (74%), Positives = 76/83 (91%) Frame = -1 Query: 505 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 326 +EVRKW+ G+++IGK+LVNS++GP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Sbjct: 355 DEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLAD 414 Query: 325 TYMSQAALGDANQDAMKTGSFYG 257 Y+S+AALGDAN DAM TG+FYG Sbjct: 415 KYLSEAALGDANSDAMNTGTFYG 437 Score = 31.2 bits (69), Expect(3) = 5e-37 Identities = 13/14 (92%), Positives = 14/14 (100%) Frame = -3 Query: 545 IDFFGALRARVYDE 504 IDFFGALRARVYD+ Sbjct: 342 IDFFGALRARVYDD 355 Score = 26.6 bits (57), Expect(3) = 5e-37 Identities = 10/15 (66%), Positives = 13/15 (86%) Frame = -2 Query: 600 NVSDESVVKIVDTFP 556 NV+ E +VK+VDTFP Sbjct: 324 NVAKEDIVKLVDTFP 338
>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 433 Score = 134 bits (338), Expect(3) = 2e-35 Identities = 60/82 (73%), Positives = 76/82 (92%) Frame = -1 Query: 505 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 326 +EVR+WV TG+ENI ++LVNS++GP TFEQPK+T+EKLLEYGHMLV EQ+NVKRVQLAD Sbjct: 351 DEVRRWVSETGVENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLAD 410 Query: 325 TYMSQAALGDANQDAMKTGSFY 260 Y+++AALG+AN+DAMKTGSF+ Sbjct: 411 KYLNEAALGEANEDAMKTGSFF 432 Score = 31.2 bits (69), Expect(3) = 2e-35 Identities = 13/14 (92%), Positives = 14/14 (100%) Frame = -3 Query: 545 IDFFGALRARVYDE 504 IDFFGALRARVYD+ Sbjct: 338 IDFFGALRARVYDD 351 Score = 23.5 bits (49), Expect(3) = 2e-35 Identities = 9/14 (64%), Positives = 12/14 (85%) Frame = -2 Query: 597 VSDESVVKIVDTFP 556 V +E VV++VDTFP Sbjct: 321 VDEEHVVQLVDTFP 334
>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) Length = 439 Score = 129 bits (324), Expect(3) = 3e-35 Identities = 62/81 (76%), Positives = 72/81 (88%) Frame = -1 Query: 505 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 326 +EVRKWV TGIE IG +L+NS DGP TFEQPKMTVEKLLEYG+MLVQEQ+NVKRVQLA+ Sbjct: 359 DEVRKWVSGTGIEAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAE 418 Query: 325 TYMSQAALGDANQDAMKTGSF 263 TY+ +AALGDAN DA+ TG+F Sbjct: 419 TYLKEAALGDANADAINTGNF 439 Score = 31.2 bits (69), Expect(3) = 3e-35 Identities = 13/14 (92%), Positives = 14/14 (100%) Frame = -3 Query: 545 IDFFGALRARVYDE 504 IDFFGALRARVYD+ Sbjct: 346 IDFFGALRARVYDD 359 Score = 28.1 bits (61), Expect(3) = 3e-35 Identities = 11/15 (73%), Positives = 14/15 (93%) Frame = -2 Query: 600 NVSDESVVKIVDTFP 556 NV +E+V+KIVDTFP Sbjct: 328 NVPEEAVIKIVDTFP 342
>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 459 Score = 129 bits (323), Expect(3) = 9e-35 Identities = 61/79 (77%), Positives = 72/79 (91%) Frame = -1 Query: 505 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 326 +EVRKWV TGIE IG++L+NSRDGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLA+ Sbjct: 354 DEVRKWVSGTGIELIGEKLLNSRDGPPTFEQPKMTLEKLLEYGNMLVQEQENVKRVQLAE 413 Query: 325 TYMSQAALGDANQDAMKTG 269 TY+ +AALGDAN DA+ TG Sbjct: 414 TYLKEAALGDANADAINTG 432 Score = 31.2 bits (69), Expect(3) = 9e-35 Identities = 13/14 (92%), Positives = 14/14 (100%) Frame = -3 Query: 545 IDFFGALRARVYDE 504 IDFFGALRARVYD+ Sbjct: 341 IDFFGALRARVYDD 354 Score = 26.9 bits (58), Expect(3) = 9e-35 Identities = 11/15 (73%), Positives = 14/15 (93%) Frame = -2 Query: 600 NVSDESVVKIVDTFP 556 NV +E+VVKIVD+FP Sbjct: 323 NVPEEAVVKIVDSFP 337
>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) (RubisCO activase beta form) Length = 435 Score = 130 bits (327), Expect(3) = 1e-34 Identities = 59/81 (72%), Positives = 74/81 (91%) Frame = -1 Query: 505 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 326 +EVRKWV G++ IGK+LVNS++GP TFEQPKMT++KLL+YG+MLV+EQ+NVKRVQLAD Sbjct: 355 DEVRKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLAD 414 Query: 325 TYMSQAALGDANQDAMKTGSF 263 YMS+AALGDANQDA+K G+F Sbjct: 415 KYMSEAALGDANQDAIKRGTF 435 Score = 31.2 bits (69), Expect(3) = 1e-34 Identities = 13/14 (92%), Positives = 14/14 (100%) Frame = -3 Query: 545 IDFFGALRARVYDE 504 IDFFGALRARVYD+ Sbjct: 342 IDFFGALRARVYDD 355 Score = 25.0 bits (53), Expect(3) = 1e-34 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = -2 Query: 600 NVSDESVVKIVDTFP 556 NV +E +VK+VD FP Sbjct: 324 NVPEEDIVKVVDQFP 338
>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) Length = 442 Score = 129 bits (324), Expect(3) = 3e-34 Identities = 61/82 (74%), Positives = 71/82 (86%) Frame = -1 Query: 505 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 326 +EVRKWV TGIE IG +L+NS DGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Sbjct: 359 DEVRKWVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLAD 418 Query: 325 TYMSQAALGDANQDAMKTGSFY 260 Y+ +AALGDAN DA+ GSF+ Sbjct: 419 KYLKEAALGDANADAINNGSFF 440 Score = 31.2 bits (69), Expect(3) = 3e-34 Identities = 13/14 (92%), Positives = 14/14 (100%) Frame = -3 Query: 545 IDFFGALRARVYDE 504 IDFFGALRARVYD+ Sbjct: 346 IDFFGALRARVYDD 359 Score = 24.6 bits (52), Expect(3) = 3e-34 Identities = 11/15 (73%), Positives = 11/15 (73%) Frame = -2 Query: 600 NVSDESVVKIVDTFP 556 NV E VVKIVD FP Sbjct: 328 NVPAEDVVKIVDNFP 342
>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 439 Score = 122 bits (307), Expect(3) = 8e-32 Identities = 53/82 (64%), Positives = 75/82 (91%) Frame = -1 Query: 505 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 326 +EVRKW+ G++ GK+LVNS++GP TF+QPKM+++KLL+YG+MLVQEQ+NVKRVQLAD Sbjct: 357 DEVRKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLAD 416 Query: 325 TYMSQAALGDANQDAMKTGSFY 260 Y+++AALG+AN+DA+K+GSF+ Sbjct: 417 KYLNEAALGNANEDAIKSGSFF 438 Score = 31.2 bits (69), Expect(3) = 8e-32 Identities = 13/14 (92%), Positives = 14/14 (100%) Frame = -3 Query: 545 IDFFGALRARVYDE 504 IDFFGALRARVYD+ Sbjct: 344 IDFFGALRARVYDD 357 Score = 23.1 bits (48), Expect(3) = 8e-32 Identities = 8/14 (57%), Positives = 11/14 (78%) Frame = -2 Query: 597 VSDESVVKIVDTFP 556 V +E + K+VDTFP Sbjct: 327 VPEEDITKLVDTFP 340
>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 441 Score = 122 bits (305), Expect(2) = 9e-31 Identities = 53/82 (64%), Positives = 74/82 (90%) Frame = -1 Query: 505 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 326 +EVRKW+ G++++GK+LVNS++GP TF+QPKMT++KLL Y MLVQEQ+NVKRVQLAD Sbjct: 359 DEVRKWISGVGVDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQENVKRVQLAD 418 Query: 325 TYMSQAALGDANQDAMKTGSFY 260 Y+++AALG+AN+DA+K+GSF+ Sbjct: 419 QYLNEAALGNANEDAIKSGSFF 440 Score = 31.2 bits (69), Expect(2) = 9e-31 Identities = 13/14 (92%), Positives = 14/14 (100%) Frame = -3 Query: 545 IDFFGALRARVYDE 504 IDFFGALRARVYD+ Sbjct: 346 IDFFGALRARVYDD 359
>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 413 Score = 87.4 bits (215), Expect(2) = 6e-18 Identities = 39/58 (67%), Positives = 49/58 (84%) Frame = -1 Query: 505 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQL 332 +EVRKW G+E IG+ LVNS++ P TF+QPKMT+EKLLEYG+MLV EQ+NVKRV+L Sbjct: 352 DEVRKWAVGVGVERIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLVMEQENVKRVKL 409 Score = 31.6 bits (70), Expect = 1.8 Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 6/38 (15%) Frame = -3 Query: 545 IDFFGALRARVYDE------*GAQVGRLYRNREHWQEA 450 IDFFGALRARVYD+ G V R+ RN + +E+ Sbjct: 339 IDFFGALRARVYDDEVRKWAVGVGVERIGRNLVNSKES 376 Score = 22.7 bits (47), Expect(2) = 6e-18 Identities = 8/11 (72%), Positives = 10/11 (90%) Frame = -2 Query: 588 ESVVKIVDTFP 556 E +VK+VDTFP Sbjct: 325 EDIVKLVDTFP 335
>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 408 Score = 66.6 bits (161), Expect(2) = 3e-14 Identities = 33/66 (50%), Positives = 46/66 (69%) Frame = -1 Query: 499 VRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 320 VR+W+ TG++ IG++LVN+R V + M + L++YG LV EQ+NVKRVQLAD Y Sbjct: 330 VRQWITDTGVDKIGQQLVNARQ-KVAMPKVSMDLNVLIKYGKSLVDEQENVKRVQLADAY 388 Query: 319 MSQAAL 302 +S A L Sbjct: 389 LSGAEL 394 Score = 31.2 bits (69), Expect(2) = 3e-14 Identities = 13/14 (92%), Positives = 14/14 (100%) Frame = -3 Query: 545 IDFFGALRARVYDE 504 IDFFGALRARVYD+ Sbjct: 315 IDFFGALRARVYDD 328
>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 415 Score = 52.4 bits (124), Expect(2) = 2e-09 Identities = 22/61 (36%), Positives = 37/61 (60%) Frame = -1 Query: 502 EVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADT 323 ++R ++ G EN+ R+VNS +GP F++P T+ L+E + +V EQ ++ QL D Sbjct: 229 QIRDFIHQVGYENVSLRVVNSLEGPPAFKKPDFTLSHLIESANFMVAEQKRIETSQLVDE 288 Query: 322 Y 320 Y Sbjct: 289 Y 289 Score = 28.5 bits (62), Expect(2) = 2e-09 Identities = 11/14 (78%), Positives = 13/14 (92%) Frame = -3 Query: 545 IDFFGALRARVYDE 504 IDFF ALR+R+YDE Sbjct: 215 IDFFSALRSRIYDE 228
>EF1A2_XENLA (P17507) Elongation factor 1-alpha, oocyte form (EF-1-alpha-O)| (EF-1AO) (42S p48) Length = 461 Score = 31.6 bits (70), Expect = 1.8 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 8/78 (10%) Frame = -1 Query: 427 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 272 VTF +T E K +E H +QE NVK + + D A N M+ Sbjct: 278 VTFAPSNVTTEVKSVEMHHEALQEALPGDNVGFNVKNISVKDIRRGNVAGDSKNDPPMQA 337 Query: 271 GSFYG*KILHTHPPSLAA 218 GSF I+ HP ++A Sbjct: 338 GSFTAQVIILNHPGQISA 355
>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast (RuBisCO activase) (RA) (Fragments) Length = 32 Score = 30.8 bits (68), Expect = 3.1 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = -1 Query: 439 RDGPVTFEQPKMTVEK 392 R+GP TFEQP MT+EK Sbjct: 17 REGPPTFEQPAMTIEK 32
>Y778_AQUAE (O66974) Hypothetical UPF0052 protein aq_778| Length = 328 Score = 30.8 bits (68), Expect = 3.1 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 5/50 (10%) Frame = +3 Query: 423 VTGPSREFTSLLPMFSIP-----VEPTHLRTSFVVHPSTQSTEKVNGLSW 557 + GP FTS+LP F +P V+ + FVV+ TQ E N +W Sbjct: 188 IIGPGSLFTSILPNFLVPQIREAVKESRALKVFVVNVMTQPGETDNFTAW 237
>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor| Length = 521 Score = 30.4 bits (67), Expect = 4.1 Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 6/57 (10%) Frame = -1 Query: 535 SVLCVLGCTTNEVR-----KWVGSTGIENIGKRLVNSRDGPVT-FEQPKMTVEKLLE 383 S L VL T N R W+GS I+ G+RL++SRD +T E P++ ++ LLE Sbjct: 202 SSLQVLRLTENPWRCDCALHWLGSW-IKEGGRRLLSSRDKKITCAEPPRLALQSLLE 257
>TAL_AQUAE (O66520) Probable transaldolase (EC 2.2.1.2)| Length = 217 Score = 30.0 bits (66), Expect = 5.3 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Frame = -1 Query: 517 GCTTNEVRKWVGSTG--IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 347 G TTN + TG + + K ++ DGPV+ E + E ++ G ML + +NV Sbjct: 24 GVTTNPTL--ISKTGRPFKEVVKEILELVDGPVSLETVSLDAEGMIREGRMLAELGENV 80
>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor| Length = 1346 Score = 30.0 bits (66), Expect = 5.3 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +3 Query: 324 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 428 + +SC+R TL T CP SS +TVI+ C ++ Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453
>EF1A_ONCVO (P27592) Elongation factor 1-alpha (EF-1-alpha)| Length = 464 Score = 30.0 bits (66), Expect = 5.3 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 8/78 (10%) Frame = -1 Query: 427 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 272 VTF +T E K +E H +QE NVK + + D A N A +T Sbjct: 278 VTFAPQNLTTEVKSVEMHHEALQEALPGDNVGFNVKNISIKDIRRGSVASDSKNDPAKET 337 Query: 271 GSFYG*KILHTHPPSLAA 218 F I+ HP ++A Sbjct: 338 KMFTAQVIIMNHPGQISA 355
>EF1A0_XENLA (P13549) Elongation factor 1-alpha, somatic form (EF-1-alpha-S)| Length = 462 Score = 29.3 bits (64), Expect = 9.1 Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 8/78 (10%) Frame = -1 Query: 427 VTFEQPKMTVE-KLLEYGHMLVQEQD-------NVKRVQLADTYMSQAALGDANQDAMKT 272 VTF +T E K +E H + E NVK V + D A N M+ Sbjct: 278 VTFAPVNVTTEVKSVEMHHEALTEAVPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEA 337 Query: 271 GSFYG*KILHTHPPSLAA 218 GSF I+ HP + A Sbjct: 338 GSFTAQVIILNHPGQIGA 355 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 82,008,431 Number of Sequences: 219361 Number of extensions: 1671500 Number of successful extensions: 5151 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 4954 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5149 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5253413348 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
