ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal32e24 |
|---|---|
| Clone Library Name | barley_pub |
>HKT6_ORYSA (Q6H501) Probable cation transporter HKT6 (OsHKT6)| Length = 530 Score = 282 bits (721), Expect = 8e-76 Identities = 138/180 (76%), Positives = 156/180 (86%) Frame = -2 Query: 717 MSSYQKIVGALFQSTNARHAGESIVDLSSISSAIIVLYTVMMYLPGYTSFLPNYDDRYSK 538 MS+YQKIV ALFQS NARHAGES+ DLS++SSAI+VLYT+MMYLPGYTSFLP +D SK Sbjct: 352 MSNYQKIVSALFQSVNARHAGESVTDLSNLSSAILVLYTIMMYLPGYTSFLPRHDGEDSK 411 Query: 537 DEKRYNRKGLLEDWILSQLSYLAIFVMLICITEREALTTDPLNFNVLSILFEVVSAYGNV 358 EK RKGLLE+WI S +SYLAIFVMLICITER+++ TDPLNFNV SILFEVV AYGNV Sbjct: 412 TEKINKRKGLLENWIFSHMSYLAIFVMLICITERDSMATDPLNFNVFSILFEVV-AYGNV 470 Query: 357 GLSMGYSCKRLLKQDLRCKDASYGFAGRWSNEGKMILIIVMVFGRLKASNLKGGKAWKLR 178 G S+GYSCKRLL D RCKDASYGFAG+WS+ GK ILIIVM+FGRLK N+KGG+AWKLR Sbjct: 471 GFSVGYSCKRLLNHDARCKDASYGFAGKWSDNGKAILIIVMLFGRLKTFNMKGGRAWKLR 530
>HKT7_ORYSA (Q7XPF7) Probable cation transporter HKT7 (OsHKT7)| Length = 500 Score = 211 bits (536), Expect = 2e-54 Identities = 108/180 (60%), Positives = 132/180 (73%), Gaps = 1/180 (0%) Frame = -2 Query: 717 MSSYQKIVGALFQSTNARHAGESIVDLSSISSAIIVLYTVMMYLPGYTSFLPNYDDRYSK 538 MS ++K+V ALF + NARH GES VDLS ++ AI+VL+ +MMYLP YT++ P ++ +K Sbjct: 320 MSPWEKVVNALFLAVNARHTGESTVDLSILAPAILVLFVLMMYLPPYTTWFPFEENSTTK 379 Query: 537 DEKRYNRK-GLLEDWILSQLSYLAIFVMLICITEREALTTDPLNFNVLSILFEVVSAYGN 361 D N+ LLE +LSQLSYL IFV+ ICITER L DPLNF+VLSI+ EVVSAYGN Sbjct: 380 DSNAENQGIRLLESTLLSQLSYLTIFVIAICITERRKLKEDPLNFSVLSIVVEVVSAYGN 439 Query: 360 VGLSMGYSCKRLLKQDLRCKDASYGFAGRWSNEGKMILIIVMVFGRLKASNLKGGKAWKL 181 VG SMGYSC R + D C D GF GRWS+ GK+ILI VM FGRLK ++KGGKAWKL Sbjct: 440 VGFSMGYSCSRQINPDHLCTDKWTGFVGRWSDSGKLILIFVMFFGRLKKFSMKGGKAWKL 499
>HKT1_ARATH (Q84TI7) Sodium transporter HKT1 (AtHKT1)| Length = 506 Score = 195 bits (495), Expect = 1e-49 Identities = 104/189 (55%), Positives = 133/189 (70%), Gaps = 10/189 (5%) Frame = -2 Query: 717 MSSYQKIVGALFQSTNARHAGESIVDLSSISSAIIVLYTVMMYLPGYTSFLPNYD----- 553 MSSY+K+VG+LFQ N+RH GE+IVDLS++S AI+VL+ +MMYLP YT F+P + Sbjct: 317 MSSYEKLVGSLFQVVNSRHTGETIVDLSTLSPAILVLFILMMYLPPYTLFMPLTEQKTIE 376 Query: 552 ----DRYSKDEKRYNRKGLLEDWILSQLSYLAIFVMLICITEREALTTDPLNFNVLSILF 385 D S++ K+ + GL I+SQLS+L I + LI ITER+ L DP+NFNVL+I Sbjct: 377 KEGGDDDSENGKKVKKSGL----IVSQLSFLTICIFLISITERQNLQRDPINFNVLNITL 432 Query: 384 EVVSAYGNVGLSMGYSCKRLLK-QDLRCKDASYGFAGRWSNEGKMILIIVMVFGRLKASN 208 EV+SAYGNVG + GYSC+R + D CKDASYGFAGRWS GK +LIIVM +GR K Sbjct: 433 EVISAYGNVGFTTGYSCERRVDISDGGCKDASYGFAGRWSPMGKFVLIIVMFYGRFKQFT 492 Query: 207 LKGGKAWKL 181 K G+AW L Sbjct: 493 AKSGRAWIL 501
>HKT8_ORYSA (Q3YAF4) Cation transporter HKT8 (OsHKT8)| Length = 554 Score = 192 bits (487), Expect = 1e-48 Identities = 90/184 (48%), Positives = 137/184 (74%), Gaps = 5/184 (2%) Frame = -2 Query: 717 MSSYQKIVGALFQSTNARHAGESIVDLSSISSAIIVLYTVMMYLPGYTSFLPNYDDRYSK 538 +++ QK+VGALF + N+RH+GE ++DLS++SSA++VLY VMMYLP YT+F+P D++ + Sbjct: 371 LTAGQKLVGALFMAVNSRHSGEMVLDLSTVSSAVVVLYVVMMYLPPYTTFVP-VQDKHQQ 429 Query: 537 DEKRYNRKG-----LLEDWILSQLSYLAIFVMLICITEREALTTDPLNFNVLSILFEVVS 373 + ++G + + ++S LS LAIF+++ICITER + DP+N++VL+I+ EV+S Sbjct: 430 TGAQSGQEGSSSSSIWQKLLMSPLSCLAIFIVVICITERRQIADDPINYSVLNIVVEVIS 489 Query: 372 AYGNVGLSMGYSCKRLLKQDLRCKDASYGFAGRWSNEGKMILIIVMVFGRLKASNLKGGK 193 AYGNVG S GYSC R ++ D C+D GF+G+WS +GK+ L+ VM +GRLK +L GG+ Sbjct: 490 AYGNVGFSTGYSCARQVRPDGSCRDLWVGFSGKWSKQGKLTLMAVMFYGRLKKFSLHGGQ 549 Query: 192 AWKL 181 AWK+ Sbjct: 550 AWKI 553
>HKT4_ORYSA (Q7XPF8) Cation transporter HKT4 (OsHKT4)| Length = 552 Score = 189 bits (480), Expect = 7e-48 Identities = 92/174 (52%), Positives = 129/174 (74%), Gaps = 2/174 (1%) Frame = -2 Query: 717 MSSYQKIVGALFQSTNARHAGESIVDLSSISSAIIVLYTVMMYLPGYTSFLPNYDDRYSK 538 M+ QK+VG LFQS N R AGESI+D+S++S + ++L+ V+MYLP SFL D Sbjct: 379 MNWLQKLVGLLFQSVNTRQAGESILDISTLSPSTLLLFAVVMYLPSDASFLTANADNQPL 438 Query: 537 DEKRYNR--KGLLEDWILSQLSYLAIFVMLICITEREALTTDPLNFNVLSILFEVVSAYG 364 +K+ N + L ++ +++LS LA+F L CITER+++++DPLNFN+ SI+FE++SA+G Sbjct: 439 TDKKTNSISRALWRNFTVNKLSCLAMFTFLACITERKSISSDPLNFNIFSIVFEIISAFG 498 Query: 363 NVGLSMGYSCKRLLKQDLRCKDASYGFAGRWSNEGKMILIIVMVFGRLKASNLK 202 NVG S+GYSC++LLK D CKDASYGF GRW+ EGK+I+I+VM GRLK LK Sbjct: 499 NVGYSLGYSCQKLLKPDATCKDASYGFVGRWTEEGKLIVILVMFLGRLKEFILK 552
>HKT1_ORYSA (Q6TPH3) Cation transporter HKT1 (OsHKT1) (Ni-OsHKT1) (Po-OsHKT1)| Length = 530 Score = 172 bits (437), Expect = 7e-43 Identities = 85/182 (46%), Positives = 128/182 (70%), Gaps = 3/182 (1%) Frame = -2 Query: 717 MSSYQKIVGALFQSTNARHAGESIVDLSSISSAIIVLYTVMMYLPGYTSFLPNYDDRYSK 538 +SSYQKI+ ALF + NARH+GE+ +D S I+ A++VL+ ++MYLP T+F + D + Sbjct: 348 LSSYQKIINALFMAVNARHSGENSIDCSLIAPAVLVLFIILMYLPPSTTFALSNGDEKTA 407 Query: 537 DEKRYNRKGLL-EDWILSQLSYLAIFVMLICITEREALTTDPLNFNVLSILFEVVSAYGN 361 ++K + GL+ ++ SQL+ +++FV++ ITER L DPLNF+ L+++FE++SAYGN Sbjct: 408 NKKAKRKLGLVVQNLAFSQLACISVFVIVAFITERSRLRNDPLNFSALNMIFEIISAYGN 467 Query: 360 VGLSMGYSCKRL--LKQDLRCKDASYGFAGRWSNEGKMILIIVMVFGRLKASNLKGGKAW 187 VGLS GYSC RL L C+D Y +G WS+EGK++L+ VM++GRLKA G+ W Sbjct: 468 VGLSTGYSCSRLQKLHPGSICQDKPYSLSGWWSDEGKLLLVFVMLYGRLKAFTKGTGEYW 527 Query: 186 KL 181 +L Sbjct: 528 RL 529
>HKT2_ORYSA (Q93XI5) Cation transporter HKT2 (OsHKT2) (Po-OsHKT2)| Length = 530 Score = 170 bits (430), Expect = 5e-42 Identities = 86/182 (47%), Positives = 126/182 (69%), Gaps = 3/182 (1%) Frame = -2 Query: 717 MSSYQKIVGALFQSTNARHAGESIVDLSSISSAIIVLYTVMMYLPGYTSFLPNYDDRYSK 538 +SSYQKI+ ALF + NARH+GE+ +D S I+ A++VL+ ++MYLP T+F + D + Sbjct: 348 LSSYQKIINALFMAVNARHSGENSIDCSLIAPAVLVLFIILMYLPPSTTFALSNGDEKTA 407 Query: 537 DEKRYNRKGLL-EDWILSQLSYLAIFVMLICITEREALTTDPLNFNVLSILFEVVSAYGN 361 ++K + GL+ + SQL+ A+FV++ ITER L DPLNF+ L+++FEV+SAYGN Sbjct: 408 NKKAKRKLGLVVRNLAFSQLACNAVFVIVALITERSRLRNDPLNFSALNMIFEVISAYGN 467 Query: 360 VGLSMGYSCKRL--LKQDLRCKDASYGFAGRWSNEGKMILIIVMVFGRLKASNLKGGKAW 187 VGL+ GYSC RL L C+D Y +G WS+EGK++L+ VM++GRLKA G+ W Sbjct: 468 VGLTTGYSCSRLQKLHPGSICQDKPYSLSGWWSDEGKLLLVSVMLYGRLKAFTKGTGEYW 527 Query: 186 KL 181 +L Sbjct: 528 RL 529
>HKT9_ORYSA (Q8L4K5) Probable cation transporter HKT9 (OsHKT9)| Length = 509 Score = 151 bits (382), Expect = 2e-36 Identities = 78/182 (42%), Positives = 112/182 (61%), Gaps = 12/182 (6%) Frame = -2 Query: 717 MSSYQKIVGALFQSTNARHAGESIVDLSSISSAIIVLYTVMMYLPGYTSFL--------- 565 ++S QKI ALF + +AR AGE+ +D S ++ A +VL+ VMMY P T Sbjct: 327 LTSLQKITNALFMAVSARQAGENSIDCSLVAPAALVLFMVMMYTPSLTKLFSACQDHKQI 386 Query: 564 -PNYDDRYSKDEKRYNRKGLLEDWILSQLSYLAIFVMLICITEREALTTDPLNFNVLSIL 388 P DDR SK K L+ S L++ +ML+CITER +++TDPLNF+ +I+ Sbjct: 387 GPESDDRTSKG------KPFLKTMAFSPLAFNTTVIMLVCITERRSISTDPLNFSTFNII 440 Query: 387 FEVVSAYGNVGLSMGYSCKRLLKQD--LRCKDASYGFAGRWSNEGKMILIIVMVFGRLKA 214 FEV+SAYGN+GLS GYSC R L+ + C + Y F+G WS GK+IL++ M++GRL + Sbjct: 441 FEVISAYGNIGLSTGYSCSRQLQHQDGIACHEKPYSFSGWWSEPGKLILVLAMLYGRLNS 500 Query: 213 SN 208 + Sbjct: 501 KD 502
>HKT3_ORYSA (Q8L481) Probable cation transporter HKT3 (OsHKT3)| Length = 509 Score = 151 bits (381), Expect = 2e-36 Identities = 80/182 (43%), Positives = 111/182 (60%), Gaps = 12/182 (6%) Frame = -2 Query: 717 MSSYQKIVGALFQSTNARHAGESIVDLSSISSAIIVLYTVMMYLPGYTSFL--------- 565 +SS QKI ALF + NAR AGE+ +D S ++ A +VL+ VMMY P T Sbjct: 327 LSSLQKITNALFMAVNARQAGENSIDCSLVAPAALVLFMVMMYTPSLTKLFSACQDHKRI 386 Query: 564 -PNYDDRYSKDEKRYNRKGLLEDWILSQLSYLAIFVMLICITEREALTTDPLNFNVLSIL 388 P DDR SK K L+ S L + +ML+CITER +L+TDPLN + +I+ Sbjct: 387 GPESDDRTSKG------KPFLKMMAFSPLGFNTTVIMLVCITERRSLSTDPLNLSTFNII 440 Query: 387 FEVVSAYGNVGLSMGYSCKRLL--KQDLRCKDASYGFAGRWSNEGKMILIIVMVFGRLKA 214 FEV+SAYGN+GLS GYSC R L ++ + C + +Y F+G WS GK+IL++ M+ GRL + Sbjct: 441 FEVISAYGNIGLSTGYSCSRQLQHQEGIACHEKAYNFSGWWSEPGKLILVLAMLCGRLNS 500 Query: 213 SN 208 + Sbjct: 501 KD 502
>TRK1_SCHPO (P47946) Potassium transport protein 1| Length = 841 Score = 73.2 bits (178), Expect = 8e-13 Identities = 55/175 (31%), Positives = 93/175 (53%), Gaps = 15/175 (8%) Frame = -2 Query: 702 KIVGALFQSTNARHAGESIVDLSSISSAIIVLYTVMMYLPGYTSFLPN-----YDDR--- 547 ++V A+FQS R AG + V +S + A++V Y VMMY+ Y + Y++R Sbjct: 635 RVVNAIFQSVCTRTAGFTSVSISELHPAVLVSYMVMMYISVYPVAINMRNTNVYEERSLG 694 Query: 546 -YSKDEKRYNRKGLLEDWILSQLS----YLAIFVMLICITEREALTTDPL--NFNVLSIL 388 Y ++ K L+D + QLS Y+ + + +ICI E + ++PL +F++ ++L Sbjct: 695 VYRTEDD--EGKSFLKDHLTEQLSYDLWYIFLGLFIICICEGGKI-SNPLDTDFSIFTVL 751 Query: 387 FEVVSAYGNVGLSMGYSCKRLLKQDLRCKDASYGFAGRWSNEGKMILIIVMVFGR 223 FEVVSAYG VGLS G S ++ + R++ K+++I + + GR Sbjct: 752 FEVVSAYGTVGLSTGLS------------SSNCSLSARFTTISKLVIIALELRGR 794
>TRK2_SCHPO (Q10065) Potassium transport protein 2| Length = 880 Score = 71.6 bits (174), Expect = 2e-12 Identities = 52/150 (34%), Positives = 72/150 (48%), Gaps = 29/150 (19%) Frame = -2 Query: 702 KIVGALFQSTNARHAGESIVDLSSISSAIIVLYTVMMYLPG------------------- 580 +I+ A+FQ+ R AG ++VDLS I+ A++V Y MMY+ Sbjct: 660 RIMNAIFQNAATRSAGFTVVDLSQIAPAVMVTYMFMMYISAYPIAMSIRQTNVYEERSLG 719 Query: 579 -YTSFLPNYDD----RYSKDEKRYNRKGLLEDWILSQLS----YLAIFVMLICITEREAL 427 Y + N DD + D RK L D I QLS YL + +I I E L Sbjct: 720 IYAADTENDDDNNINNNNNDNNTPKRKNFLMDHIQRQLSHDLWYLFLGYFIITIVEGRRL 779 Query: 426 TTD-PLNFNVLSILFEVVSAYGNVGLSMGY 340 ++ F + +ILFEV+S YG VGLS+GY Sbjct: 780 ESEAEPQFTLFAILFEVISGYGTVGLSLGY 809
>TRK2_YEAST (P28584) Low-affinity potassium transport protein| Length = 889 Score = 61.6 bits (148), Expect = 2e-09 Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 46/208 (22%) Frame = -2 Query: 708 YQKIVGALFQSTNARHAGESIVDLSSISSAIIVLYTVMMY---LPGYTSF---------- 568 Y+ ++G LFQS R AG ++VDLS + +I V Y +MMY LP S Sbjct: 630 YRALMG-LFQSVCTRTAGFNVVDLSKLHPSIQVSYMLMMYVSVLPLAISIRRTNVYEEQS 688 Query: 567 ------------LPNYDDRYSKDE----------------KRYNRKGLLEDWILSQLS-- 478 + + DD D K+ + K + + QLS Sbjct: 689 LGLYDSGQDDENITHEDDIKETDHDGESEERDTVSTKSKPKKQSPKSFVGAHLRRQLSFD 748 Query: 477 --YLAIFVMLICITE-REALTTDPLNFNVLSILFEVVSAYGNVGLSMGYSCKRLLKQDLR 307 YL + + +ICI E R+ + +FNV +ILFEVVSAYG VGLS+GY Sbjct: 749 LWYLFLGLFIICICEGRKIEDVNKPDFNVFAILFEVVSAYGTVGLSLGY----------- 797 Query: 306 CKDASYGFAGRWSNEGKMILIIVMVFGR 223 + + + +++ K+++I +++ GR Sbjct: 798 -PNTNTSLSAQFTVLSKLVIIAMLIRGR 824
>TRK1_YEAST (P12685) High-affinity potassium transport protein| Length = 1235 Score = 56.2 bits (134), Expect = 1e-07 Identities = 34/100 (34%), Positives = 57/100 (57%), Gaps = 1/100 (1%) Frame = -2 Query: 519 RKGLLED-WILSQLSYLAIFVMLICITEREALTTDPLNFNVLSILFEVVSAYGNVGLSMG 343 RK L D W L +L +F++ IC ++ +P NFN+ +ILFE+VSAYG VGLS+G Sbjct: 1076 RKQLSFDLWFL----FLGLFIICICEGDKIKDVQEP-NFNIFAILFEIVSAYGTVGLSLG 1130 Query: 342 YSCKRLLKQDLRCKDASYGFAGRWSNEGKMILIIVMVFGR 223 Y D + F+ +++ K+++I +++ G+ Sbjct: 1131 Y------------PDTNQSFSRQFTTLSKLVIIAMLIRGK 1158 Score = 39.3 bits (90), Expect = 0.012 Identities = 21/41 (51%), Positives = 29/41 (70%) Frame = -2 Query: 708 YQKIVGALFQSTNARHAGESIVDLSSISSAIIVLYTVMMYL 586 Y+ +VG LFQS + R AG S+VDLS + +I V Y +MMY+ Sbjct: 943 YRVLVG-LFQSVSTRTAGFSVVDLSQLHPSIQVSYMLMMYV 982
>TRK1_SACBA (P28569) High-affinity potassium transport protein| Length = 1241 Score = 53.5 bits (127), Expect = 6e-07 Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 1/88 (1%) Frame = -2 Query: 483 LSYLAIFVMLICITEREALTT-DPLNFNVLSILFEVVSAYGNVGLSMGYSCKRLLKQDLR 307 L +L + + +ICI ER+ + NFNV +ILFE+VSAYG VGLS+GY Sbjct: 1089 LWFLFLGLFIICICERDKIKDIQRPNFNVFTILFEIVSAYGTVGLSLGY----------- 1137 Query: 306 CKDASYGFAGRWSNEGKMILIIVMVFGR 223 + + F+ + + K+I+I +++ G+ Sbjct: 1138 -PNTNQSFSRQLTTLSKLIIIAMLIRGK 1164 Score = 39.3 bits (90), Expect = 0.012 Identities = 21/41 (51%), Positives = 29/41 (70%) Frame = -2 Query: 708 YQKIVGALFQSTNARHAGESIVDLSSISSAIIVLYTVMMYL 586 Y+ +VG LFQS + R AG S+VDLS + +I V Y +MMY+ Sbjct: 949 YRVLVG-LFQSVSTRTAGFSVVDLSQLHPSIQVSYMLMMYV 988
>NTPJ_ENTHR (P43440) V-type sodium ATP synthase subunit J (EC 3.6.3.14)| (Na(+)-translocating ATPase subunit J) Length = 451 Score = 36.6 bits (83), Expect = 0.079 Identities = 39/178 (21%), Positives = 71/178 (39%), Gaps = 16/178 (8%) Frame = -2 Query: 705 QKIVGALFQSTNARHAGESIVDLSSISSAIIVLYTVMMYLPGYTS--------------F 568 +++ F S R AG +D +S A ++L +MY+ G + Sbjct: 263 ERLANTFFMSVTPRTAGYYSIDYLQMSHAGLILTMFLMYIGGTSGSTAGGLKTTTLGILL 322 Query: 567 LPNYDDRYSKDEKRYNRKGLLEDWILSQLS--YLAIFVMLICITEREALTTDPLNFNVLS 394 + + K + + + +L L+ ++ + + ++ I T P + Sbjct: 323 IQMHAMFKGKTRAEAFGRTIRQAAVLRALTLFFVTLSLCVVAIMVLSVTETIPKTSGIEY 382 Query: 393 ILFEVVSAYGNVGLSMGYSCKRLLKQDLRCKDASYGFAGRWSNEGKMILIIVMVFGRL 220 I FEV SA+G VGL+MG L DL + GK+++I +M GR+ Sbjct: 383 IAFEVFSAFGTVGLTMG------LTPDL-------------TLIGKLVIISLMYIGRV 421
>PQIA_SHIFL (P0AFM1) Paraquat-inducible protein A| Length = 417 Score = 32.7 bits (73), Expect = 1.1 Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Frame = -1 Query: 313 PTLQGCFI-WVCWKMEQRGENDSDHCHGLREA*GVQFEGRKSM 188 PTL+ I W+CW + G+ DS+ H + E V+F GR SM Sbjct: 316 PTLKMIAIAWLCWDAKGHGKRDSERMHLIYEV--VEFVGRWSM 356
>PQIA_ECOLI (P0AFL9) Paraquat-inducible protein A| Length = 417 Score = 32.7 bits (73), Expect = 1.1 Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Frame = -1 Query: 313 PTLQGCFI-WVCWKMEQRGENDSDHCHGLREA*GVQFEGRKSM 188 PTL+ I W+CW + G+ DS+ H + E V+F GR SM Sbjct: 316 PTLKMIAIAWLCWDAKGHGKRDSERMHLIYEV--VEFVGRWSM 356
>PQIA_ECOL6 (P0AFM0) Paraquat-inducible protein A| Length = 417 Score = 32.7 bits (73), Expect = 1.1 Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Frame = -1 Query: 313 PTLQGCFI-WVCWKMEQRGENDSDHCHGLREA*GVQFEGRKSM 188 PTL+ I W+CW + G+ DS+ H + E V+F GR SM Sbjct: 316 PTLKMIAIAWLCWDAKGHGKRDSERMHLIYEV--VEFVGRWSM 356
>LGT_AZOBR (Q8KSV0) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)| Length = 268 Score = 31.6 bits (70), Expect = 2.5 Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 5/66 (7%) Frame = -2 Query: 408 FNVLSILFEVVSAYGNVGLS-----MGYSCKRLLKQDLRCKDASYGFAGRWSNEGKMILI 244 F +L+IL + + G G++ +GY R++ + R DA GF + G+++ + Sbjct: 189 FVLLAILVRMPAVRGRAGMTAGIFFIGYGLSRIIAEFFREPDAQLGFLYAGATMGQLLSV 248 Query: 243 IVMVFG 226 +++FG Sbjct: 249 PMVLFG 254
>UNG_BACSU (P39615) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)| Length = 225 Score = 31.2 bits (69), Expect = 3.3 Identities = 15/47 (31%), Positives = 28/47 (59%) Frame = -2 Query: 324 LKQDLRCKDASYGFAGRWSNEGKMILIIVMVFGRLKASNLKGGKAWK 184 L+QD+ C ++G W+ +G ++L V+ R +A++ K GK W+ Sbjct: 97 LQQDIGCSIPNHGSLVSWAKQGVLLLNTVLTVRRGQANSHK-GKGWE 142
>UNG2_LISMF (Q720K2) Uracil-DNA glycosylase 2 (EC 3.2.2.-) (UDG 2)| Length = 224 Score = 31.2 bits (69), Expect = 3.3 Identities = 15/55 (27%), Positives = 31/55 (56%) Frame = -2 Query: 324 LKQDLRCKDASYGFAGRWSNEGKMILIIVMVFGRLKASNLKGGKAWKLR*HQLCE 160 L DL C+ + G+ RW+++G ++L V+ R +N G+ W++ +++ E Sbjct: 96 LHNDLNCEIPNNGYLIRWADQGVLLLNTVLTV-RAGQANSHRGQGWEILTNRIIE 149
>5HT1F_CAVPO (O08890) 5-hydroxytryptamine 1F receptor (5-HT-1F) (Serotonin| receptor 1F) (5-HT1F) Length = 366 Score = 30.4 bits (67), Expect = 5.7 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 6/59 (10%) Frame = -1 Query: 436 RSTDHRST*FQCFEHTVRSCKC------IWKRGLVNGLQLQEATQTRPTLQGCFIWVCW 278 +S ST F +TV+S +C W+R ++G + ++A T + G F+ +CW Sbjct: 249 KSLSDPSTDFDKIHNTVKSPRCKLRHEKSWRRQKISGTRERKAATTLGLILGAFV-ICW 306
>L1CA1_BRARE (Q90478) Neural cell adhesion molecule L1.1 (N-CAM L1.1) (Fragment)| Length = 1197 Score = 30.0 bits (66), Expect = 7.4 Identities = 19/87 (21%), Positives = 42/87 (48%) Frame = -2 Query: 705 QKIVGALFQSTNARHAGESIVDLSSISSAIIVLYTVMMYLPGYTSFLPNYDDRYSKDEKR 526 +KI GA ++ + ++ ++ L + S +I V L G TS+ ++ YS + + Sbjct: 988 KKIEGAEWEESEKINSTQAFYQLQGLDSGVIYHLQV---LSGNTSYDWDFKTIYSPEWHK 1044 Query: 525 YNRKGLLEDWILSQLSYLAIFVMLICI 445 R E W + +S L + ++++ + Sbjct: 1045 SPRNFATEGWFIGLISALVLLLLVLLL 1071 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 106,326,615 Number of Sequences: 219361 Number of extensions: 2202751 Number of successful extensions: 4863 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 4723 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4846 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7309604013 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
